Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000405.t1 | XP_003630450.1 | 98.7 | 540 | 7 | 0 | 3 | 542 | 1 | 540 | 1.20E-210 | 742.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000405.t1 | Q39817 | 86.1 | 481 | 64 | 2 | 3 | 480 | 1 | 481 | 1.0e-160 | 568.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000405.t1 | G7LGJ8 | 98.7 | 540 | 7 | 0 | 3 | 542 | 1 | 540 | 9.0e-211 | 742.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene001347 | MS.gene000405 | PPI |
| MS.gene006869 | MS.gene000405 | PPI |
| MS.gene82400 | MS.gene000405 | PPI |
| MS.gene56457 | MS.gene000405 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000405.t1 | MTR_8g095680 | 98.148 | 540 | 10 | 0 | 3 | 542 | 1 | 540 | 0.0 | 1078 |
| MS.gene000405.t1 | MTR_3g098430 | 78.938 | 546 | 104 | 6 | 3 | 542 | 1 | 541 | 0.0 | 802 |
| MS.gene000405.t1 | MTR_3g098430 | 78.182 | 550 | 106 | 6 | 3 | 542 | 1 | 546 | 0.0 | 798 |
| MS.gene000405.t1 | MTR_1g083960 | 40.526 | 380 | 167 | 13 | 38 | 410 | 26 | 353 | 2.74e-60 | 205 |
| MS.gene000405.t1 | MTR_4g068080 | 34.165 | 401 | 182 | 15 | 17 | 402 | 12 | 345 | 4.98e-59 | 202 |
| MS.gene000405.t1 | MTR_7g080370 | 33.090 | 411 | 199 | 13 | 3 | 402 | 1 | 346 | 9.78e-59 | 201 |
| MS.gene000405.t1 | MTR_7g080370 | 33.090 | 411 | 199 | 13 | 3 | 402 | 1 | 346 | 2.34e-58 | 200 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000405.t1 | AT5G61790 | 73.635 | 531 | 133 | 3 | 13 | 542 | 6 | 530 | 0.0 | 788 |
| MS.gene000405.t1 | AT5G07340 | 74.067 | 509 | 122 | 5 | 36 | 540 | 27 | 529 | 0.0 | 747 |
| MS.gene000405.t1 | AT5G07340 | 74.308 | 506 | 120 | 5 | 39 | 540 | 38 | 537 | 0.0 | 745 |
| MS.gene000405.t1 | AT1G09210 | 38.686 | 411 | 183 | 12 | 7 | 410 | 3 | 351 | 2.60e-61 | 208 |
| MS.gene000405.t1 | AT1G56340 | 39.173 | 411 | 177 | 14 | 7 | 410 | 7 | 351 | 2.83e-61 | 208 |
| MS.gene000405.t1 | AT1G56340 | 39.173 | 411 | 177 | 14 | 7 | 410 | 7 | 351 | 5.43e-61 | 207 |
| MS.gene000405.t1 | AT1G08450 | 34.588 | 425 | 213 | 15 | 14 | 430 | 10 | 377 | 1.32e-58 | 201 |
| MS.gene000405.t1 | AT1G08450 | 31.294 | 425 | 202 | 16 | 14 | 430 | 10 | 352 | 1.37e-43 | 160 |
| MS.gene000405.t1 | AT1G08450 | 36.207 | 232 | 106 | 6 | 199 | 430 | 134 | 323 | 2.36e-27 | 114 |
Find 154 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGGGCTGCTTCACAATT+TGG | 0.117242 | 4.3:-7373555 | None:intergenic |
| AATTGAAAATCCAGCTTATA+AGG | 0.199133 | 4.3:+7373644 | MS.gene000405:CDS |
| CAATTTGGGTTAGTAATCTT+AGG | 0.221903 | 4.3:-7373540 | None:intergenic |
| GGTTTCTTATCTTCAGGATC+TGG | 0.250300 | 4.3:-7373312 | None:intergenic |
| GTTTCATCGACAGGGGAATA+TGG | 0.254330 | 4.3:+7370973 | None:intergenic |
| CTCTTTCTCAATAGTAAACT+TGG | 0.257204 | 4.3:-7373850 | None:intergenic |
| AGTGAGGGGCATGAAGATTA+TGG | 0.263277 | 4.3:+7372820 | MS.gene000405:CDS |
| ACCGTTATATTCATTCTTAT+CGG | 0.278275 | 4.3:-7371263 | None:intergenic |
| TCCTCAGGTTTCTTATCTTC+AGG | 0.293756 | 4.3:-7373318 | None:intergenic |
| CAGCTATCGGTATTGAGATT+TGG | 0.301537 | 4.3:+7373739 | MS.gene000405:CDS |
| TCTTCATCGTCCCAATCTTC+TGG | 0.309076 | 4.3:-7373498 | None:intergenic |
| TATGCTGGATTCTTCTTCAT+TGG | 0.315161 | 4.3:-7373597 | None:intergenic |
| TCTCCCTATTCTATCATGTT+TGG | 0.320919 | 4.3:+7373036 | MS.gene000405:CDS |
| ATCCAGCTTATAAGGGTATA+TGG | 0.323335 | 4.3:+7373652 | MS.gene000405:CDS |
| ATCCAGCATACAAGGGAAAA+TGG | 0.325180 | 4.3:+7373610 | MS.gene000405:CDS |
| CTCTCCACTGTCTTGGTTAG+TGG | 0.328971 | 4.3:-7374513 | None:intergenic |
| TTCTGTGCATTCTAGGCATC+TGG | 0.336994 | 4.3:+7372785 | MS.gene000405:intron |
| CAGGGGCTGCTTCACAATTT+GGG | 0.337351 | 4.3:-7373554 | None:intergenic |
| AGCTCAAAGTAATCAGGGTT+TGG | 0.338624 | 4.3:-7373690 | None:intergenic |
| TCAGGATCTGGGATTGTCTT+GGG | 0.366663 | 4.3:-7373300 | None:intergenic |
| GAAACAGAAGGAAGAAGAAA+AGG | 0.367207 | 4.3:+7373872 | MS.gene000405:CDS |
| CTTCATTCTCTCCACTGTCT+TGG | 0.379721 | 4.3:-7374520 | None:intergenic |
| AGCTGCAATAGGCTCAAAAT+CGG | 0.385593 | 4.3:-7373721 | None:intergenic |
| TGACGGGGAACAGAAGAAAA+AGG | 0.390374 | 4.3:+7373233 | MS.gene000405:CDS |
| AGAATCATTGTCGAATTCCT+TGG | 0.403305 | 4.3:-7373016 | None:intergenic |
| TTTGTGGCCCCACACTTGTC+AGG | 0.403994 | 4.3:-7373060 | None:intergenic |
| AATTTGGGTTAGTAATCTTA+GGG | 0.406892 | 4.3:-7373539 | None:intergenic |
| TCATCAGGCTTTACTGCACT+TGG | 0.408900 | 4.3:-7373369 | None:intergenic |
| CAAAATTTGCAACTCATTGT+CGG | 0.409058 | 4.3:-7373208 | None:intergenic |
| TTCAGGATCTGGGATTGTCT+TGG | 0.412629 | 4.3:-7373301 | None:intergenic |
| AAAATTTGCAACTCATTGTC+GGG | 0.414444 | 4.3:-7373207 | None:intergenic |
| GTTTCTTATCTTCAGGATCT+GGG | 0.420391 | 4.3:-7373311 | None:intergenic |
| GGCTTTACTGCACTTGGGTC+GGG | 0.421849 | 4.3:-7373363 | None:intergenic |
| TCATCATCTAACCATCCTTC+AGG | 0.423626 | 4.3:-7373441 | None:intergenic |
| GATTGTCTTGGGAGGGATAA+GGG | 0.435368 | 4.3:-7373289 | None:intergenic |
| TGATGAGCCTGTGATTCTTA+AGG | 0.438519 | 4.3:+7372891 | MS.gene000405:CDS |
| GAATCATTGTCGAATTCCTT+GGG | 0.440765 | 4.3:-7373015 | None:intergenic |
| TCTCTCTCGTCCCAGTCCTC+AGG | 0.441848 | 4.3:-7373333 | None:intergenic |
| AGGACCAAACATGATAGAAT+AGG | 0.444316 | 4.3:-7373040 | None:intergenic |
| CGATGAAGAGGATGGTGAAT+GGG | 0.445046 | 4.3:+7373512 | MS.gene000405:CDS |
| TTTGCAGGATCTCATTGAAA+AGG | 0.448014 | 4.3:+7374268 | MS.gene000405:intron |
| GTGAGGGGCATGAAGATTAT+GGG | 0.448284 | 4.3:+7372821 | MS.gene000405:CDS |
| GCATCCTCATCCCAGTCATC+AGG | 0.452608 | 4.3:-7373384 | None:intergenic |
| TACCGCGTCATCGGCATCAT+CGG | 0.454767 | 4.3:-7371080 | None:intergenic |
| TTCCTTCGTATCGTATTTGG+TGG | 0.456544 | 4.3:+7374356 | MS.gene000405:CDS |
| GGCTACAAAACCAGAAGATT+GGG | 0.458059 | 4.3:+7373488 | MS.gene000405:CDS |
| AGGCTACAAAACCAGAAGAT+TGG | 0.458247 | 4.3:+7373487 | MS.gene000405:CDS |
| ATTGAAAATCCAGCTTATAA+GGG | 0.458787 | 4.3:+7373645 | MS.gene000405:CDS |
| TCAATACCGATAGCTGCAAT+AGG | 0.462507 | 4.3:-7373732 | None:intergenic |
| GTGCAGTAAAGCCTGATGAC+TGG | 0.469031 | 4.3:+7373373 | MS.gene000405:CDS |
| ACGATGAAGAGGATGGTGAA+TGG | 0.471046 | 4.3:+7373511 | MS.gene000405:CDS |
| GAAGAAGAATCCAGCATACA+AGG | 0.471522 | 4.3:+7373602 | MS.gene000405:CDS |
| TTTCATCGACAGGGGAATAT+GGG | 0.471974 | 4.3:+7370974 | None:intergenic |
| GGCAAATTTCTTATCTTCTG+AGG | 0.473999 | 4.3:+7373254 | MS.gene000405:CDS |
| GTCTCTTGTGCAGGCAAGAG+TGG | 0.475290 | 4.3:+7374460 | MS.gene000405:intron |
| GGATTGTCTTGGGAGGGATA+AGG | 0.478867 | 4.3:-7373290 | None:intergenic |
| TCAACATACTCCCCACTCTT+CGG | 0.479318 | 4.3:-7373114 | None:intergenic |
| ATAAGATTGCCGCGTCATAC+CGG | 0.480655 | 4.3:+7373811 | MS.gene000405:CDS |
| CTGGTTGTGGTGAGTGGAAA+CGG | 0.483867 | 4.3:+7373574 | MS.gene000405:CDS |
| AGCTTGTCAGAGGGAACAGA+TGG | 0.491925 | 4.3:-7373156 | None:intergenic |
| CGTCATACCGGGAGACTACA+TGG | 0.492103 | 4.3:+7373823 | MS.gene000405:CDS |
| AATGAAGTGCACCTTGTTTG+TGG | 0.492594 | 4.3:-7373076 | None:intergenic |
| TCTGGGTCATCTATCTCCTC+AGG | 0.498032 | 4.3:-7373465 | None:intergenic |
| CTGGGATGAGGATGCACCCT+TGG | 0.500943 | 4.3:+7373392 | MS.gene000405:CDS |
| TTCCATATACCCTTATAAGC+TGG | 0.501975 | 4.3:-7373654 | None:intergenic |
| TTGCAGGATCTCATTGAAAA+GGG | 0.502190 | 4.3:+7374269 | MS.gene000405:intron |
| AGAATTCCAACTGTGAGATT+CGG | 0.503519 | 4.3:-7374302 | None:intergenic |
| AAGATGAATTACCGCGTCAT+CGG | 0.505451 | 4.3:-7371089 | None:intergenic |
| TTCTTCATCAAGAATTTCCA+AGG | 0.505747 | 4.3:-7373409 | None:intergenic |
| CGTTTCCACTCACCACAACC+AGG | 0.506800 | 4.3:-7373573 | None:intergenic |
| TAAGATTGCCGCGTCATACC+GGG | 0.509139 | 4.3:+7373812 | MS.gene000405:CDS |
| CATCATCGGAAGCATGAAGA+AGG | 0.517297 | 4.3:-7371066 | None:intergenic |
| AGGCTTTACTGCACTTGGGT+CGG | 0.517691 | 4.3:-7373364 | None:intergenic |
| AAGATAAGAAACCTGAGGAC+TGG | 0.518095 | 4.3:+7373322 | MS.gene000405:CDS |
| TTTGAGCCTATTGCAGCTAT+CGG | 0.519883 | 4.3:+7373726 | MS.gene000405:CDS |
| TCTTTCTCAATAGTAAACTT+GGG | 0.520577 | 4.3:-7373849 | None:intergenic |
| GGACCAAACATGATAGAATA+GGG | 0.520952 | 4.3:-7373039 | None:intergenic |
| GATATGCACCACCACATTCG+AGG | 0.524176 | 4.3:-7372957 | None:intergenic |
| AAGCTTGTAGGCACTCAGGA+AGG | 0.524251 | 4.3:-7374136 | None:intergenic |
| TAAGGGTATATGGAAGCCTC+AGG | 0.527187 | 4.3:+7373662 | MS.gene000405:CDS |
| TATTGAGATTTGGACAATGC+AGG | 0.530334 | 4.3:+7373749 | MS.gene000405:CDS |
| TGTGAAGCAGCCCCTGGTTG+TGG | 0.538010 | 4.3:+7373561 | MS.gene000405:CDS |
| TTAGTGGAAGTTTCTGCGGC+GGG | 0.539110 | 4.3:-7374497 | None:intergenic |
| TCCGATAAGAATGAATATAA+CGG | 0.541713 | 4.3:+7371262 | MS.gene000405:CDS |
| TTTGAGACTCGCCTTCAGAA+TGG | 0.542633 | 4.3:+7372934 | MS.gene000405:CDS |
| TGTTTGGTCCTGACAAGTGT+GGG | 0.544403 | 4.3:+7373052 | MS.gene000405:CDS |
| GATTGGGACGATGAAGAGGA+TGG | 0.545919 | 4.3:+7373504 | MS.gene000405:CDS |
| GATTCATCCTTAAGAATCAC+AGG | 0.546646 | 4.3:-7372898 | None:intergenic |
| GAATGAAGAAAACAAAGAGG+AGG | 0.550444 | 4.3:+7374535 | MS.gene000405:CDS |
| CCAAATTGTGAAGCAGCCCC+TGG | 0.552013 | 4.3:+7373555 | MS.gene000405:CDS |
| CTTCTACGAATCATTTGATG+AGG | 0.552271 | 4.3:+7371216 | MS.gene000405:CDS |
| GCTGCAATAGGCTCAAAATC+GGG | 0.552533 | 4.3:-7373720 | None:intergenic |
| GAACGAAAGCGAATTCCTCT+CGG | 0.553910 | 4.3:+7370998 | MS.gene000405:CDS |
| CAGCCCCTGGTTGTGGTGAG+TGG | 0.555593 | 4.3:+7373568 | MS.gene000405:CDS |
| TATCTTCGACCACAGGAGGC+TGG | 0.558917 | 4.3:+7372985 | MS.gene000405:CDS |
| TGGAATTCTTGTAGCCGTTG+TGG | 0.561141 | 4.3:+7374316 | MS.gene000405:CDS |
| TTCGACCACAGGAGGCTGGT+TGG | 0.565629 | 4.3:+7372989 | MS.gene000405:CDS |
| CACATTCGAGGCCATTCTGA+AGG | 0.570634 | 4.3:-7372945 | None:intergenic |
| TGCAGTAAAGCCTGATGACT+GGG | 0.572111 | 4.3:+7373374 | MS.gene000405:CDS |
| CAAGTGTGGGGCCACAAACA+AGG | 0.573921 | 4.3:+7373065 | MS.gene000405:CDS |
| ATCGAAGGCTCCACGTCGGA+GGG | 0.574361 | 4.3:+7374562 | MS.gene000405:CDS |
| GGATCTGGGATTGTCTTGGG+AGG | 0.575634 | 4.3:-7373297 | None:intergenic |
| TCCTTCGTATCGTATTTGGT+GGG | 0.575662 | 4.3:+7374357 | MS.gene000405:CDS |
| TGGGCTTCCATGTAGTCTCC+CGG | 0.577142 | 4.3:-7373830 | None:intergenic |
| GGTTTCCAACCAGCCTCCTG+TGG | 0.577641 | 4.3:-7372994 | None:intergenic |
| AGAGAATGAAGAAAACAAAG+AGG | 0.578426 | 4.3:+7374532 | MS.gene000405:CDS |
| AGATAAGAAACCTGAGGACT+GGG | 0.579804 | 4.3:+7373323 | MS.gene000405:CDS |
| ACGCAGCCGAATCTCACAGT+TGG | 0.579809 | 4.3:+7374296 | MS.gene000405:CDS |
| CTTCAGAATGGCCTCGAATG+TGG | 0.579974 | 4.3:+7372946 | MS.gene000405:CDS |
| AGCTTGTAGGCACTCAGGAA+GGG | 0.580489 | 4.3:-7374135 | None:intergenic |
| ATGTTTGGTCCTGACAAGTG+TGG | 0.588377 | 4.3:+7373051 | MS.gene000405:CDS |
| GCTTGTCAGAGGGAACAGAT+GGG | 0.589147 | 4.3:-7373155 | None:intergenic |
| AGAAGATTGGGACGATGAAG+AGG | 0.591248 | 4.3:+7373500 | MS.gene000405:CDS |
| CTGGAAGCATTCAAAGAGTG+AGG | 0.591782 | 4.3:+7372804 | MS.gene000405:CDS |
| TTGGTTAGTGGAAGTTTCTG+CGG | 0.593316 | 4.3:-7374501 | None:intergenic |
| CATCGAAGGCTCCACGTCGG+AGG | 0.595933 | 4.3:+7374561 | MS.gene000405:CDS |
| TCTAAAATATCTTCGACCAC+AGG | 0.596292 | 4.3:+7372978 | MS.gene000405:CDS |
| CATCAGGCTTTACTGCACTT+GGG | 0.599406 | 4.3:-7373368 | None:intergenic |
| TGGAAGCATTCAAAGAGTGA+GGG | 0.600050 | 4.3:+7372805 | MS.gene000405:CDS |
| GTTAGTGGAAGTTTCTGCGG+CGG | 0.603337 | 4.3:-7374498 | None:intergenic |
| CTTGTCAGAGGGAACAGATG+GGG | 0.612571 | 4.3:-7373154 | None:intergenic |
| AAGCTGTGAAACCTGAAGGA+TGG | 0.618409 | 4.3:+7373430 | MS.gene000405:CDS |
| GTCTTGGGAGGGATAAGGGA+AGG | 0.622855 | 4.3:-7373285 | None:intergenic |
| CACGTGAGATAGCTTGTCAG+AGG | 0.622862 | 4.3:-7373166 | None:intergenic |
| AAAATATCTTCGACCACAGG+AGG | 0.623259 | 4.3:+7372981 | MS.gene000405:CDS |
| TATTGAGAAAGAGAAACAGA+AGG | 0.623870 | 4.3:+7373860 | MS.gene000405:CDS |
| TTGTCAGAGGGAACAGATGG+GGG | 0.626548 | 4.3:-7373153 | None:intergenic |
| TTTCCACTCACCACAACCAG+GGG | 0.634593 | 4.3:-7373571 | None:intergenic |
| TCTTCATCAAGAATTTCCAA+GGG | 0.634894 | 4.3:-7373408 | None:intergenic |
| GTTTCCACTCACCACAACCA+GGG | 0.635541 | 4.3:-7373572 | None:intergenic |
| CAAAGAGGAGGAAACATCGA+AGG | 0.636270 | 4.3:+7374547 | MS.gene000405:CDS |
| ATTTGGGTTAGTAATCTTAG+GGG | 0.637193 | 4.3:-7373538 | None:intergenic |
| TCAGGGTTTGGAATATCCTG+AGG | 0.637275 | 4.3:-7373678 | None:intergenic |
| GAAAAGGACACTGAATCAAG+TGG | 0.639039 | 4.3:+7373888 | MS.gene000405:CDS |
| GAGATTTGGACAATGCAGGA+TGG | 0.641655 | 4.3:+7373753 | MS.gene000405:CDS |
| AAAGCCTGATGACTGGGATG+AGG | 0.642158 | 4.3:+7373380 | MS.gene000405:CDS |
| TTCCGATGATGCCGATGACG+CGG | 0.642498 | 4.3:+7371078 | MS.gene000405:CDS |
| TCCCACCAAATACGATACGA+AGG | 0.645566 | 4.3:-7374358 | None:intergenic |
| GGAGGCTGGTTGGAAACCCA+AGG | 0.645830 | 4.3:+7372999 | MS.gene000405:CDS |
| AAGAAGAATCCAGCATACAA+GGG | 0.648479 | 4.3:+7373603 | MS.gene000405:CDS |
| GGAAGCATTCAAAGAGTGAG+GGG | 0.655093 | 4.3:+7372806 | MS.gene000405:CDS |
| TCCTGAAGATAAGAAACCTG+AGG | 0.657027 | 4.3:+7373317 | MS.gene000405:CDS |
| ATGGTTAGATGATGAGCCTG+AGG | 0.657489 | 4.3:+7373449 | MS.gene000405:CDS |
| CAGAATGGCCTCGAATGTGG+TGG | 0.657663 | 4.3:+7372949 | MS.gene000405:CDS |
| GATCTGGGATTGTCTTGGGA+GGG | 0.659461 | 4.3:-7373296 | None:intergenic |
| TCTCGCTTTACCCTCCGACG+TGG | 0.660404 | 4.3:-7374572 | None:intergenic |
| TGTAGTCTCCCGGTATGACG+CGG | 0.661561 | 4.3:-7373820 | None:intergenic |
| GAAGAAGCTGTGAAACCTGA+AGG | 0.662222 | 4.3:+7373426 | MS.gene000405:CDS |
| GTTTGGTCCTGACAAGTGTG+GGG | 0.685526 | 4.3:+7373053 | MS.gene000405:CDS |
| TGAGGAGATAGATGACCCAG+AGG | 0.689200 | 4.3:+7373467 | MS.gene000405:CDS |
| ACGTGAGATAGCTTGTCAGA+GGG | 0.689496 | 4.3:-7373165 | None:intergenic |
| ACTTCCACTAACCAAGACAG+TGG | 0.694252 | 4.3:+7374509 | MS.gene000405:CDS |
| TGTCAAGACAATAACCACAA+CGG | 0.738680 | 4.3:-7374330 | None:intergenic |
| AAACATCGAAGGCTCCACGT+CGG | 0.757199 | 4.3:+7374558 | MS.gene000405:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTTATAGAATATAATAT+TGG | + | chr4.3:7372354-7372373 | MS.gene000405:intron | 10.0% |
| !! | ATTTATAAAAAAAAACATAC+AGG | + | chr4.3:7371894-7371913 | MS.gene000405:intron | 10.0% |
| !!! | ATTGATTTTGTTAATTTTTT+TGG | + | chr4.3:7371406-7371425 | MS.gene000405:intron | 10.0% |
| !!! | ATTTTTATTTACAAAAAGAT+TGG | + | chr4.3:7371669-7371688 | MS.gene000405:intron | 10.0% |
| !!! | GTATGTTTTTTTTTATAAAT+AGG | - | chr4.3:7371894-7371913 | None:intergenic | 10.0% |
| !! | AATAATAAATATTGTCATCA+AGG | - | chr4.3:7371698-7371717 | None:intergenic | 15.0% |
| !! | TTTCAAAAAAAAATTCTTGT+AGG | + | chr4.3:7371474-7371493 | MS.gene000405:intron | 15.0% |
| !! | TTTCATTAATTGTGAATTAA+TGG | + | chr4.3:7371330-7371349 | MS.gene000405:intron | 15.0% |
| !!! | ACTATTTTTGACAAAAAAAT+TGG | - | chr4.3:7371931-7371950 | None:intergenic | 15.0% |
| !!! | TTTTGAAATAGATTTGAAAT+TGG | - | chr4.3:7371462-7371481 | None:intergenic | 15.0% |
| !! | ATATTCTATAACTATTTCAG+AGG | - | chr4.3:7372349-7372368 | None:intergenic | 20.0% |
| !! | ATGATTATGAAAATAAGAGT+CGG | + | chr4.3:7372440-7372459 | MS.gene000405:intron | 20.0% |
| !! | TAGAATATAATATTGGAAAG+TGG | + | chr4.3:7372361-7372380 | MS.gene000405:intron | 20.0% |
| !! | TATTCTATAACTATTTCAGA+GGG | - | chr4.3:7372348-7372367 | None:intergenic | 20.0% |
| !! | TTTAACAGTATATGTATTTG+TGG | + | chr4.3:7372394-7372413 | MS.gene000405:intron | 20.0% |
| !!! | TTCAACTTTAATTTTTCAAG+TGG | + | chr4.3:7372127-7372146 | MS.gene000405:intron | 20.0% |
| ! | AAGTAAAATCATGCATAAGA+AGG | - | chr4.3:7374063-7374082 | None:intergenic | 25.0% |
| ! | AATTGAAAATCCAGCTTATA+AGG | + | chr4.3:7373644-7373663 | MS.gene000405:CDS | 25.0% |
| ! | ACCGTTATATTCATTCTTAT+CGG | - | chr4.3:7371266-7371285 | None:intergenic | 25.0% |
| ! | ATTGAAAATCCAGCTTATAA+GGG | + | chr4.3:7373645-7373664 | MS.gene000405:CDS | 25.0% |
| ! | ATTTCCTATATGTTAATCAC+CGG | + | chr4.3:7374432-7374451 | MS.gene000405:intron | 25.0% |
| ! | CCTTTCTTAGAAAATATGAT+TGG | - | chr4.3:7372491-7372510 | None:intergenic | 25.0% |
| ! | TAGTATAAGCCATTGATAAA+GGG | - | chr4.3:7372045-7372064 | None:intergenic | 25.0% |
| ! | TCCGATAAGAATGAATATAA+CGG | + | chr4.3:7371262-7371281 | MS.gene000405:CDS | 25.0% |
| ! | TCTTTCTCAATAGTAAACTT+GGG | - | chr4.3:7373852-7373871 | None:intergenic | 25.0% |
| ! | TTAGTATAAGCCATTGATAA+AGG | - | chr4.3:7372046-7372065 | None:intergenic | 25.0% |
| ! | TTGTTAGCATATCTTAAACA+AGG | + | chr4.3:7372157-7372176 | MS.gene000405:intron | 25.0% |
| !! | AAAAAATTCTTGTAGGTTGA+AGG | + | chr4.3:7371481-7371500 | MS.gene000405:intron | 25.0% |
| !! | AAATGATAACAGAGTTGTTT+TGG | - | chr4.3:7374416-7374435 | None:intergenic | 25.0% |
| !! | ATAAGCTGGATTTTCAATTA+GGG | - | chr4.3:7373643-7373662 | None:intergenic | 25.0% |
| !! | GTTTGTTTGATGATTGAATT+TGG | + | chr4.3:7371130-7371149 | MS.gene000405:intron | 25.0% |
| !! | TATAAGCTGGATTTTCAATT+AGG | - | chr4.3:7373644-7373663 | None:intergenic | 25.0% |
| !! | TTGTTTAAGATATGCTAACA+AGG | - | chr4.3:7372158-7372177 | None:intergenic | 25.0% |
| !! | TTTTAAGCTCAAAGTAATCA+GGG | - | chr4.3:7373698-7373717 | None:intergenic | 25.0% |
| !! | TTTTTATGAGGCTTAAATTG+AGG | + | chr4.3:7371163-7371182 | MS.gene000405:intron | 25.0% |
| !!! | AAACAAACAAGAGTATTTGT+TGG | + | chr4.3:7371548-7371567 | MS.gene000405:intron | 25.0% |
| !!! | AAAGCTAAATTTTAAGGACA+AGG | - | chr4.3:7372608-7372627 | None:intergenic | 25.0% |
| !!! | AATTTGGGTTAGTAATCTTA+GGG | - | chr4.3:7373542-7373561 | None:intergenic | 25.0% |
| !!! | CATCTTCTCTCTTTTTTTTT+TGG | + | chr4.3:7371106-7371125 | MS.gene000405:intron | 25.0% |
| !!! | CCAATCATATTTTCTAAGAA+AGG | + | chr4.3:7372488-7372507 | MS.gene000405:intron | 25.0% |
| !!! | CTTTAATTTTTCAAGTGGTA+CGG | + | chr4.3:7372132-7372151 | MS.gene000405:intron | 25.0% |
| !!! | TACATGTATTTTAAGCTTGT+AGG | - | chr4.3:7374151-7374170 | None:intergenic | 25.0% |
| !!! | TCTAATTTGTTAAACACGAA+AGG | - | chr4.3:7371728-7371747 | None:intergenic | 25.0% |
| !!! | TTTTTAAGCTCAAAGTAATC+AGG | - | chr4.3:7373699-7373718 | None:intergenic | 25.0% |
| AAAATTTGCAACTCATTGTC+GGG | - | chr4.3:7373210-7373229 | None:intergenic | 30.0% | |
| AAATGCTAATGTGTTTCCTT+AGG | + | chr4.3:7371836-7371855 | MS.gene000405:intron | 30.0% | |
| AAATGGTAAAAAGCAACATG+TGG | - | chr4.3:7371983-7372002 | None:intergenic | 30.0% | |
| AACATTCCTCTCTACTTATA+AGG | - | chr4.3:7371767-7371786 | None:intergenic | 30.0% | |
| AACTATGGCCTAAAAGTAAT+TGG | + | chr4.3:7371811-7371830 | MS.gene000405:intron | 30.0% | |
| AATGCTAATGTGTTTCCTTA+GGG | + | chr4.3:7371837-7371856 | MS.gene000405:intron | 30.0% | |
| ACTCTTGAAAAGTAGTATAG+TGG | + | chr4.3:7371632-7371651 | MS.gene000405:intron | 30.0% | |
| AGAGAATGAAGAAAACAAAG+AGG | + | chr4.3:7374532-7374551 | MS.gene000405:CDS | 30.0% | |
| AGATGTAATGTTTCACTTTG+TGG | + | chr4.3:7374221-7374240 | MS.gene000405:intron | 30.0% | |
| ATCAAGTCACTATAACTGAA+GGG | - | chr4.3:7372723-7372742 | None:intergenic | 30.0% | |
| CAAAATTTGCAACTCATTGT+CGG | - | chr4.3:7373211-7373230 | None:intergenic | 30.0% | |
| CTCTACTTATAAGGATGTAA+GGG | - | chr4.3:7371758-7371777 | None:intergenic | 30.0% | |
| CTCTTTCTCAATAGTAAACT+TGG | - | chr4.3:7373853-7373872 | None:intergenic | 30.0% | |
| TAAAATCATGCATAAGAAGG+AGG | - | chr4.3:7374060-7374079 | None:intergenic | 30.0% | |
| TATCAAGTCACTATAACTGA+AGG | - | chr4.3:7372724-7372743 | None:intergenic | 30.0% | |
| TATTGAGAAAGAGAAACAGA+AGG | + | chr4.3:7373860-7373879 | MS.gene000405:CDS | 30.0% | |
| TCTCTACTTATAAGGATGTA+AGG | - | chr4.3:7371759-7371778 | None:intergenic | 30.0% | |
| TCTTCATCAAGAATTTCCAA+GGG | - | chr4.3:7373411-7373430 | None:intergenic | 30.0% | |
| TGTGTAGATTCACAAATTTC+TGG | + | chr4.3:7372517-7372536 | MS.gene000405:intron | 30.0% | |
| TTACATCCTTATAAGTAGAG+AGG | + | chr4.3:7371758-7371777 | MS.gene000405:intron | 30.0% | |
| TTCTTCATCAAGAATTTCCA+AGG | - | chr4.3:7373412-7373431 | None:intergenic | 30.0% | |
| TTGTGAATTAATGGAACATG+CGG | + | chr4.3:7371339-7371358 | MS.gene000405:intron | 30.0% | |
| TTTACCATTTGCTTGTGTAA+GGG | + | chr4.3:7371993-7372012 | MS.gene000405:intron | 30.0% | |
| ! | CCATGCAAAGCTAAATTTTA+AGG | - | chr4.3:7372614-7372633 | None:intergenic | 30.0% |
| ! | TAAGCTGGATTTTCAATTAG+GGG | - | chr4.3:7373642-7373661 | None:intergenic | 30.0% |
| ! | TTTTACCATTTGCTTGTGTA+AGG | + | chr4.3:7371992-7372011 | MS.gene000405:intron | 30.0% |
| !! | ATTTGGGTTAGTAATCTTAG+GGG | - | chr4.3:7373541-7373560 | None:intergenic | 30.0% |
| !! | CAATTTGGGTTAGTAATCTT+AGG | - | chr4.3:7373543-7373562 | None:intergenic | 30.0% |
| !! | CCTTAAAATTTAGCTTTGCA+TGG | + | chr4.3:7372611-7372630 | MS.gene000405:intron | 30.0% |
| !! | GCATTTCACCAATTACTTTT+AGG | - | chr4.3:7371822-7371841 | None:intergenic | 30.0% |
| !!! | ACAAATTTCTGGTACTTTTG+TGG | + | chr4.3:7372528-7372547 | MS.gene000405:intron | 30.0% |
| !!! | AGTTGCAAATTTTGATTGAC+GGG | + | chr4.3:7373217-7373236 | MS.gene000405:CDS | 30.0% |
| !!! | GAGTTGCAAATTTTGATTGA+CGG | + | chr4.3:7373216-7373235 | MS.gene000405:CDS | 30.0% |
| !!! | GGATCTATGTTGTTTTTATG+AGG | + | chr4.3:7371151-7371170 | MS.gene000405:intron | 30.0% |
| AAAACCCTTACACAAGCAAA+TGG | - | chr4.3:7372000-7372019 | None:intergenic | 35.0% | |
| AAGAAGAATCCAGCATACAA+GGG | + | chr4.3:7373603-7373622 | MS.gene000405:CDS | 35.0% | |
| AAGACCAGACAAAAAACAGT+AGG | - | chr4.3:7374019-7374038 | None:intergenic | 35.0% | |
| AAGCATAAAAATCCGAAGAG+TGG | + | chr4.3:7373102-7373121 | MS.gene000405:CDS | 35.0% | |
| AATGCTAACAACTGCTTTCA+TGG | + | chr4.3:7372182-7372201 | MS.gene000405:intron | 35.0% | |
| ACTGTTTCCTTAGATTTGCA+TGG | + | chr4.3:7372579-7372598 | MS.gene000405:intron | 35.0% | |
| AGAATCATTGTCGAATTCCT+TGG | - | chr4.3:7373019-7373038 | None:intergenic | 35.0% | |
| AGAATTCCAACTGTGAGATT+CGG | - | chr4.3:7374305-7374324 | None:intergenic | 35.0% | |
| AGCATAAAAATCCGAAGAGT+GGG | + | chr4.3:7373103-7373122 | MS.gene000405:CDS | 35.0% | |
| AGCATACATGTAATGTCATC+TGG | + | chr4.3:7373918-7373937 | MS.gene000405:intron | 35.0% | |
| AGGACCAAACATGATAGAAT+AGG | - | chr4.3:7373043-7373062 | None:intergenic | 35.0% | |
| ATCAAATACCTTCTTCTGCA+AGG | - | chr4.3:7374091-7374110 | None:intergenic | 35.0% | |
| CAAAAACATGAACCTAGAGA+AGG | - | chr4.3:7372637-7372656 | None:intergenic | 35.0% | |
| CTTCTACGAATCATTTGATG+AGG | + | chr4.3:7371216-7371235 | MS.gene000405:CDS | 35.0% | |
| GAAACAGAAGGAAGAAGAAA+AGG | + | chr4.3:7373872-7373891 | MS.gene000405:CDS | 35.0% | |
| GAATCATTGTCGAATTCCTT+GGG | - | chr4.3:7373018-7373037 | None:intergenic | 35.0% | |
| GAATGAAGAAAACAAAGAGG+AGG | + | chr4.3:7374535-7374554 | MS.gene000405:CDS | 35.0% | |
| GATTCATCCTTAAGAATCAC+AGG | - | chr4.3:7372901-7372920 | None:intergenic | 35.0% | |
| GGACCAAACATGATAGAATA+GGG | - | chr4.3:7373042-7373061 | None:intergenic | 35.0% | |
| GGCAAATTTCTTATCTTCTG+AGG | + | chr4.3:7373254-7373273 | MS.gene000405:CDS | 35.0% | |
| GTTTCTTATCTTCAGGATCT+GGG | - | chr4.3:7373314-7373333 | None:intergenic | 35.0% | |
| TATGCTGGATTCTTCTTCAT+TGG | - | chr4.3:7373600-7373619 | None:intergenic | 35.0% | |
| TATTGAGATTTGGACAATGC+AGG | + | chr4.3:7373749-7373768 | MS.gene000405:CDS | 35.0% | |
| TCAAATACCTTCTTCTGCAA+GGG | - | chr4.3:7374090-7374109 | None:intergenic | 35.0% | |
| TCTCCCTATTCTATCATGTT+TGG | + | chr4.3:7373036-7373055 | MS.gene000405:CDS | 35.0% | |
| TGATCCGGTGATTAACATAT+AGG | - | chr4.3:7374439-7374458 | None:intergenic | 35.0% | |
| TGTCAAGACAATAACCACAA+CGG | - | chr4.3:7374333-7374352 | None:intergenic | 35.0% | |
| TTAACACGTCCCTTTATCAA+TGG | + | chr4.3:7372033-7372052 | MS.gene000405:intron | 35.0% | |
| TTCCATATACCCTTATAAGC+TGG | - | chr4.3:7373657-7373676 | None:intergenic | 35.0% | |
| TTGCAGGATCTCATTGAAAA+GGG | + | chr4.3:7374269-7374288 | MS.gene000405:intron | 35.0% | |
| TTGTTAAACACGAAAGGAGT+CGG | - | chr4.3:7371722-7371741 | None:intergenic | 35.0% | |
| TTTGCAGGATCTCATTGAAA+AGG | + | chr4.3:7374268-7374287 | MS.gene000405:intron | 35.0% | |
| ! | AAGCTGGATTTTCAATTAGG+GGG | - | chr4.3:7373641-7373660 | None:intergenic | 35.0% |
| ! | AAGGTATCCATGCAAATCTA+AGG | - | chr4.3:7372589-7372608 | None:intergenic | 35.0% |
| ! | ATCCAGCTTATAAGGGTATA+TGG | + | chr4.3:7373652-7373671 | MS.gene000405:CDS | 35.0% |
| ! | CTCAACTCACTTTCTTCTTT+TGG | + | chr4.3:7371301-7371320 | MS.gene000405:intron | 35.0% |
| ! | GTATTTGTTGGACACATGAT+TGG | + | chr4.3:7371560-7371579 | MS.gene000405:intron | 35.0% |
| ! | GTTTTCCTTCGTATCGTATT+TGG | + | chr4.3:7374353-7374372 | MS.gene000405:CDS | 35.0% |
| ! | TCTAAAATATCTTCGACCAC+AGG | + | chr4.3:7372978-7372997 | MS.gene000405:CDS | 35.0% |
| !! | ATGAGGATTTTGATGATCGT+TGG | + | chr4.3:7371233-7371252 | MS.gene000405:CDS | 35.0% |
| !! | TGAATTCTGTGTTGATTTGC+AGG | + | chr4.3:7374253-7374272 | MS.gene000405:intron | 35.0% |
| !! | TGATTTGTTCTGTGCATTCT+AGG | + | chr4.3:7372778-7372797 | MS.gene000405:intron | 35.0% |
| !! | TTTCTGGTACTTTTGTGGAA+TGG | + | chr4.3:7372533-7372552 | MS.gene000405:intron | 35.0% |
| !!! | GTTGCAAATTTTGATTGACG+GGG | + | chr4.3:7373218-7373237 | MS.gene000405:CDS | 35.0% |
| AAAAGCAAATCTTCCTGCTG+TGG | + | chr4.3:7374182-7374201 | MS.gene000405:intron | 40.0% | |
| AAAATATCTTCGACCACAGG+AGG | + | chr4.3:7372981-7373000 | MS.gene000405:CDS | 40.0% | |
| AAGATAAGAAACCTGAGGAC+TGG | + | chr4.3:7373322-7373341 | MS.gene000405:CDS | 40.0% | |
| AAGATGAATTACCGCGTCAT+CGG | - | chr4.3:7371092-7371111 | None:intergenic | 40.0% | |
| AATGTGTTTCCTTAGGGAGT+TGG | + | chr4.3:7371843-7371862 | MS.gene000405:intron | 40.0% | |
| ACTATAACTGAAGGGAGATG+TGG | - | chr4.3:7372715-7372734 | None:intergenic | 40.0% | |
| AGATAAGAAACCTGAGGACT+GGG | + | chr4.3:7373323-7373342 | MS.gene000405:CDS | 40.0% | |
| AGCTCAAAGTAATCAGGGTT+TGG | - | chr4.3:7373693-7373712 | None:intergenic | 40.0% | |
| AGCTGCAATAGGCTCAAAAT+CGG | - | chr4.3:7373724-7373743 | None:intergenic | 40.0% | |
| AGGCTACAAAACCAGAAGAT+TGG | + | chr4.3:7373487-7373506 | MS.gene000405:CDS | 40.0% | |
| AGGGTAAAGCGAGATAATTG+AGG | + | chr4.3:7374581-7374600 | MS.gene000405:CDS | 40.0% | |
| ATCCAGCATACAAGGGAAAA+TGG | + | chr4.3:7373610-7373629 | MS.gene000405:CDS | 40.0% | |
| ATTCCTTAACCAACTCCCTA+AGG | - | chr4.3:7371855-7371874 | None:intergenic | 40.0% | |
| CAATATGCACCAACTACCAA+GGG | - | chr4.3:7372670-7372689 | None:intergenic | 40.0% | |
| GAAAAGGACACTGAATCAAG+TGG | + | chr4.3:7373888-7373907 | MS.gene000405:CDS | 40.0% | |
| GAAGAAGAATCCAGCATACA+AGG | + | chr4.3:7373602-7373621 | MS.gene000405:CDS | 40.0% | |
| GAATGTTCAGACTTTAGGTG+AGG | + | chr4.3:7371780-7371799 | MS.gene000405:intron | 40.0% | |
| GAGAGGAATGTTCAGACTTT+AGG | + | chr4.3:7371775-7371794 | MS.gene000405:intron | 40.0% | |
| GCATAAAAATCCGAAGAGTG+GGG | + | chr4.3:7373104-7373123 | MS.gene000405:CDS | 40.0% | |
| GGCTACAAAACCAGAAGATT+GGG | + | chr4.3:7373488-7373507 | MS.gene000405:CDS | 40.0% | |
| GGGTAAAGCGAGATAATTGA+GGG | + | chr4.3:7374582-7374601 | MS.gene000405:CDS | 40.0% | |
| GGTGAGGTGAATGTAAACTA+TGG | + | chr4.3:7371796-7371815 | MS.gene000405:intron | 40.0% | |
| GGTTTCTTATCTTCAGGATC+TGG | - | chr4.3:7373315-7373334 | None:intergenic | 40.0% | |
| TACAGGGAGTTTCTACTTAC+TGG | - | chr4.3:7374392-7374411 | None:intergenic | 40.0% | |
| TCAATACCGATAGCTGCAAT+AGG | - | chr4.3:7373735-7373754 | None:intergenic | 40.0% | |
| TCATCATCTAACCATCCTTC+AGG | - | chr4.3:7373444-7373463 | None:intergenic | 40.0% | |
| TCCTCAGGTTTCTTATCTTC+AGG | - | chr4.3:7373321-7373340 | None:intergenic | 40.0% | |
| TCCTGAAGATAAGAAACCTG+AGG | + | chr4.3:7373317-7373336 | MS.gene000405:CDS | 40.0% | |
| TCCTTCGTATCGTATTTGGT+GGG | + | chr4.3:7374357-7374376 | MS.gene000405:CDS | 40.0% | |
| TGATGAGCCTGTGATTCTTA+AGG | + | chr4.3:7372891-7372910 | MS.gene000405:CDS | 40.0% | |
| TGTTAAACACGAAAGGAGTC+GGG | - | chr4.3:7371721-7371740 | None:intergenic | 40.0% | |
| TTCCTTCGTATCGTATTTGG+TGG | + | chr4.3:7374356-7374375 | MS.gene000405:CDS | 40.0% | |
| TTGGTTAGTGGAAGTTTCTG+CGG | - | chr4.3:7374504-7374523 | None:intergenic | 40.0% | |
| TTTGAGCCTATTGCAGCTAT+CGG | + | chr4.3:7373726-7373745 | MS.gene000405:CDS | 40.0% | |
| ! | AATGAAGTGCACCTTGTTTG+TGG | - | chr4.3:7373079-7373098 | None:intergenic | 40.0% |
| ! | AGCTGGATTTTCAATTAGGG+GGG | - | chr4.3:7373640-7373659 | None:intergenic | 40.0% |
| ! | CAGCTATCGGTATTGAGATT+TGG | + | chr4.3:7373739-7373758 | MS.gene000405:CDS | 40.0% |
| ! | TTTCCTTAGGGAGTTGGTTA+AGG | + | chr4.3:7371849-7371868 | MS.gene000405:intron | 40.0% |
| ! | TTTTAAGCTTGTAGGCACTC+AGG | - | chr4.3:7374143-7374162 | None:intergenic | 40.0% |
| ! | TTTTTGCTCGTTAGTTCCCT+TGG | + | chr4.3:7372651-7372670 | MS.gene000405:intron | 40.0% |
| !! | TGGAAGCATTCAAAGAGTGA+GGG | + | chr4.3:7372805-7372824 | MS.gene000405:CDS | 40.0% |
| !!! | AACAGAGTTGTTTTGGCTAC+AGG | - | chr4.3:7374409-7374428 | None:intergenic | 40.0% |
| !!! | ACAGAGTTGTTTTGGCTACA+GGG | - | chr4.3:7374408-7374427 | None:intergenic | 40.0% |
| !!! | CTCTCCTACTGTTTTTTGTC+TGG | + | chr4.3:7374012-7374031 | MS.gene000405:intron | 40.0% |
| AACAACTGCTTTCATGGCAC+TGG | + | chr4.3:7372188-7372207 | MS.gene000405:intron | 45.0% | |
| AAGCTGTGAAACCTGAAGGA+TGG | + | chr4.3:7373430-7373449 | MS.gene000405:CDS | 45.0% | |
| ACGATGAAGAGGATGGTGAA+TGG | + | chr4.3:7373511-7373530 | MS.gene000405:CDS | 45.0% | |
| ACTTCCACTAACCAAGACAG+TGG | + | chr4.3:7374509-7374528 | MS.gene000405:CDS | 45.0% | |
| AGAAGATTGGGACGATGAAG+AGG | + | chr4.3:7373500-7373519 | MS.gene000405:CDS | 45.0% | |
| AGCACTGCAAAAATTCCGAG+AGG | - | chr4.3:7371016-7371035 | None:intergenic | 45.0% | |
| AGTGAATCAAATGCCACAGC+AGG | - | chr4.3:7374198-7374217 | None:intergenic | 45.0% | |
| ATAAGATTGCCGCGTCATAC+CGG | + | chr4.3:7373811-7373830 | MS.gene000405:CDS | 45.0% | |
| ATGGTTAGATGATGAGCCTG+AGG | + | chr4.3:7373449-7373468 | MS.gene000405:CDS | 45.0% | |
| ATGTTTGGTCCTGACAAGTG+TGG | + | chr4.3:7373051-7373070 | MS.gene000405:CDS | 45.0% | |
| CAAAGAGGAGGAAACATCGA+AGG | + | chr4.3:7374547-7374566 | MS.gene000405:CDS | 45.0% | |
| CATCAGGCTTTACTGCACTT+GGG | - | chr4.3:7373371-7373390 | None:intergenic | 45.0% | |
| CCAATATGCACCAACTACCA+AGG | - | chr4.3:7372671-7372690 | None:intergenic | 45.0% | |
| CGATGAAGAGGATGGTGAAT+GGG | + | chr4.3:7373512-7373531 | MS.gene000405:CDS | 45.0% | |
| CTTCATTCTCTCCACTGTCT+TGG | - | chr4.3:7374523-7374542 | None:intergenic | 45.0% | |
| GAACGAAAGCGAATTCCTCT+CGG | + | chr4.3:7370998-7371017 | MS.gene000405:CDS | 45.0% | |
| GAAGAAGCTGTGAAACCTGA+AGG | + | chr4.3:7373426-7373445 | MS.gene000405:CDS | 45.0% | |
| GAGATTTGGACAATGCAGGA+TGG | + | chr4.3:7373753-7373772 | MS.gene000405:CDS | 45.0% | |
| GATTGTCTTGGGAGGGATAA+GGG | - | chr4.3:7373292-7373311 | None:intergenic | 45.0% | |
| GCTGCAATAGGCTCAAAATC+GGG | - | chr4.3:7373723-7373742 | None:intergenic | 45.0% | |
| TCAACATACTCCCCACTCTT+CGG | - | chr4.3:7373117-7373136 | None:intergenic | 45.0% | |
| TCATCAGGCTTTACTGCACT+TGG | - | chr4.3:7373372-7373391 | None:intergenic | 45.0% | |
| TCCCACCAAATACGATACGA+AGG | - | chr4.3:7374361-7374380 | None:intergenic | 45.0% | |
| TCTTCATCGTCCCAATCTTC+TGG | - | chr4.3:7373501-7373520 | None:intergenic | 45.0% | |
| TGACGGGGAACAGAAGAAAA+AGG | + | chr4.3:7373233-7373252 | MS.gene000405:CDS | 45.0% | |
| TGCAGTAAAGCCTGATGACT+GGG | + | chr4.3:7373374-7373393 | MS.gene000405:CDS | 45.0% | |
| TGGAATTCTTGTAGCCGTTG+TGG | + | chr4.3:7374316-7374335 | MS.gene000405:CDS | 45.0% | |
| TGTTTGGTCCTGACAAGTGT+GGG | + | chr4.3:7373052-7373071 | MS.gene000405:CDS | 45.0% | |
| TTCTGTGCATTCTAGGCATC+TGG | + | chr4.3:7372785-7372804 | MS.gene000405:intron | 45.0% | |
| ! | ACGTGAGATAGCTTGTCAGA+GGG | - | chr4.3:7373168-7373187 | None:intergenic | 45.0% |
| ! | AGTGAGGGGCATGAAGATTA+TGG | + | chr4.3:7372820-7372839 | MS.gene000405:CDS | 45.0% |
| ! | CATCATCGGAAGCATGAAGA+AGG | - | chr4.3:7371069-7371088 | None:intergenic | 45.0% |
| ! | CCTTGGTAGTTGGTGCATAT+TGG | + | chr4.3:7372668-7372687 | MS.gene000405:intron | 45.0% |
| ! | CTTTTTGCCCTTGCAGAAGA+AGG | + | chr4.3:7374080-7374099 | MS.gene000405:intron | 45.0% |
| ! | GTGAGGGGCATGAAGATTAT+GGG | + | chr4.3:7372821-7372840 | MS.gene000405:CDS | 45.0% |
| ! | TAAGGGTATATGGAAGCCTC+AGG | + | chr4.3:7373662-7373681 | MS.gene000405:CDS | 45.0% |
| ! | TCAGGATCTGGGATTGTCTT+GGG | - | chr4.3:7373303-7373322 | None:intergenic | 45.0% |
| ! | TCAGGGTTTGGAATATCCTG+AGG | - | chr4.3:7373681-7373700 | None:intergenic | 45.0% |
| ! | TCGTTAGTTCCCTTGGTAGT+TGG | + | chr4.3:7372658-7372677 | MS.gene000405:intron | 45.0% |
| ! | TTCAGGATCTGGGATTGTCT+TGG | - | chr4.3:7373304-7373323 | None:intergenic | 45.0% |
| ! | TTTGAGACTCGCCTTCAGAA+TGG | + | chr4.3:7372934-7372953 | MS.gene000405:CDS | 45.0% |
| !! | CTGGAAGCATTCAAAGAGTG+AGG | + | chr4.3:7372804-7372823 | MS.gene000405:CDS | 45.0% |
| !! | GGAAGCATTCAAAGAGTGAG+GGG | + | chr4.3:7372806-7372825 | MS.gene000405:CDS | 45.0% |
| !!! | CTTCTGGTTTTGTAGCCTCT+GGG | - | chr4.3:7373485-7373504 | None:intergenic | 45.0% |
| !!! | TCTTCTGGTTTTGTAGCCTC+TGG | - | chr4.3:7373486-7373505 | None:intergenic | 45.0% |
| !!! | TGCCATTTTCCCTTGTATGC+TGG | - | chr4.3:7373615-7373634 | None:intergenic | 45.0% |
| AAACATCGAAGGCTCCACGT+CGG | + | chr4.3:7374558-7374577 | MS.gene000405:CDS | 50.0% | |
| AAAGCCTGATGACTGGGATG+AGG | + | chr4.3:7373380-7373399 | MS.gene000405:CDS | 50.0% | |
| AAGCTTGTAGGCACTCAGGA+AGG | - | chr4.3:7374139-7374158 | None:intergenic | 50.0% | |
| AGCTTGTAGGCACTCAGGAA+GGG | - | chr4.3:7374138-7374157 | None:intergenic | 50.0% | |
| AGCTTGTCAGAGGGAACAGA+TGG | - | chr4.3:7373159-7373178 | None:intergenic | 50.0% | |
| AGCTTTGCATGGCCTTCTCT+AGG | + | chr4.3:7372622-7372641 | MS.gene000405:intron | 50.0% | |
| AGGCTTTACTGCACTTGGGT+CGG | - | chr4.3:7373367-7373386 | None:intergenic | 50.0% | |
| CACATTCGAGGCCATTCTGA+AGG | - | chr4.3:7372948-7372967 | None:intergenic | 50.0% | |
| CAGATGGGGGAAACTTGAGA+TGG | - | chr4.3:7373143-7373162 | None:intergenic | 50.0% | |
| CAGGGGCTGCTTCACAATTT+GGG | - | chr4.3:7373557-7373576 | None:intergenic | 50.0% | |
| CCTGCACAAGAGACATGATC+CGG | - | chr4.3:7374454-7374473 | None:intergenic | 50.0% | |
| CTCTCCACTGTCTTGGTTAG+TGG | - | chr4.3:7374516-7374535 | None:intergenic | 50.0% | |
| CTGGTTGTGGTGAGTGGAAA+CGG | + | chr4.3:7373574-7373593 | MS.gene000405:CDS | 50.0% | |
| CTTCAGAATGGCCTCGAATG+TGG | + | chr4.3:7372946-7372965 | MS.gene000405:CDS | 50.0% | |
| CTTGTCAGAGGGAACAGATG+GGG | - | chr4.3:7373157-7373176 | None:intergenic | 50.0% | |
| GATATGCACCACCACATTCG+AGG | - | chr4.3:7372960-7372979 | None:intergenic | 50.0% | |
| GATTGGGACGATGAAGAGGA+TGG | + | chr4.3:7373504-7373523 | MS.gene000405:CDS | 50.0% | |
| GCTTGTCAGAGGGAACAGAT+GGG | - | chr4.3:7373158-7373177 | None:intergenic | 50.0% | |
| GGATTGTCTTGGGAGGGATA+AGG | - | chr4.3:7373293-7373312 | None:intergenic | 50.0% | |
| GTGCAGTAAAGCCTGATGAC+TGG | + | chr4.3:7373373-7373392 | MS.gene000405:CDS | 50.0% | |
| GTTAGTGGAAGTTTCTGCGG+CGG | - | chr4.3:7374501-7374520 | None:intergenic | 50.0% | |
| GTTTCCACTCACCACAACCA+GGG | - | chr4.3:7373575-7373594 | None:intergenic | 50.0% | |
| GTTTGGTCCTGACAAGTGTG+GGG | + | chr4.3:7373053-7373072 | MS.gene000405:CDS | 50.0% | |
| TAAGATTGCCGCGTCATACC+GGG | + | chr4.3:7373812-7373831 | MS.gene000405:CDS | 50.0% | |
| TCTGGGTCATCTATCTCCTC+AGG | - | chr4.3:7373468-7373487 | None:intergenic | 50.0% | |
| TGAGGAGATAGATGACCCAG+AGG | + | chr4.3:7373467-7373486 | MS.gene000405:CDS | 50.0% | |
| TTAGTGGAAGTTTCTGCGGC+GGG | - | chr4.3:7374500-7374519 | None:intergenic | 50.0% | |
| TTGTCAGAGGGAACAGATGG+GGG | - | chr4.3:7373156-7373175 | None:intergenic | 50.0% | |
| TTTCCACTCACCACAACCAG+GGG | - | chr4.3:7373574-7373593 | None:intergenic | 50.0% | |
| ! | CACGTGAGATAGCTTGTCAG+AGG | - | chr4.3:7373169-7373188 | None:intergenic | 50.0% |
| ! | GATCTGGGATTGTCTTGGGA+GGG | - | chr4.3:7373299-7373318 | None:intergenic | 50.0% |
| ACGCAGCCGAATCTCACAGT+TGG | + | chr4.3:7374296-7374315 | MS.gene000405:CDS | 55.0% | |
| CAAGTGTGGGGCCACAAACA+AGG | + | chr4.3:7373065-7373084 | MS.gene000405:CDS | 55.0% | |
| CAGAATGGCCTCGAATGTGG+TGG | + | chr4.3:7372949-7372968 | MS.gene000405:CDS | 55.0% | |
| CCAAATTGTGAAGCAGCCCC+TGG | + | chr4.3:7373555-7373574 | MS.gene000405:CDS | 55.0% | |
| CCAGGGGCTGCTTCACAATT+TGG | - | chr4.3:7373558-7373577 | None:intergenic | 55.0% | |
| CCGGATCATGTCTCTTGTGC+AGG | + | chr4.3:7374451-7374470 | MS.gene000405:intron | 55.0% | |
| CGTCATACCGGGAGACTACA+TGG | + | chr4.3:7373823-7373842 | MS.gene000405:CDS | 55.0% | |
| CGTTTCCACTCACCACAACC+AGG | - | chr4.3:7373576-7373595 | None:intergenic | 55.0% | |
| GCATCCTCATCCCAGTCATC+AGG | - | chr4.3:7373387-7373406 | None:intergenic | 55.0% | |
| GGCTTTACTGCACTTGGGTC+GGG | - | chr4.3:7373366-7373385 | None:intergenic | 55.0% | |
| GTCTCTTGTGCAGGCAAGAG+TGG | + | chr4.3:7374460-7374479 | MS.gene000405:intron | 55.0% | |
| GTCTTGGGAGGGATAAGGGA+AGG | - | chr4.3:7373288-7373307 | None:intergenic | 55.0% | |
| TACCGCGTCATCGGCATCAT+CGG | - | chr4.3:7371083-7371102 | None:intergenic | 55.0% | |
| TATCTTCGACCACAGGAGGC+TGG | + | chr4.3:7372985-7373004 | MS.gene000405:CDS | 55.0% | |
| TGGGCTTCCATGTAGTCTCC+CGG | - | chr4.3:7373833-7373852 | None:intergenic | 55.0% | |
| TGTAGTCTCCCGGTATGACG+CGG | - | chr4.3:7373823-7373842 | None:intergenic | 55.0% | |
| TTCCGATGATGCCGATGACG+CGG | + | chr4.3:7371078-7371097 | MS.gene000405:CDS | 55.0% | |
| TTTGTGGCCCCACACTTGTC+AGG | - | chr4.3:7373063-7373082 | None:intergenic | 55.0% | |
| ! | GGATCTGGGATTGTCTTGGG+AGG | - | chr4.3:7373300-7373319 | None:intergenic | 55.0% |
| ATCGAAGGCTCCACGTCGGA+GGG | + | chr4.3:7374562-7374581 | MS.gene000405:CDS | 60.0% | |
| CTGGGATGAGGATGCACCCT+TGG | + | chr4.3:7373392-7373411 | MS.gene000405:CDS | 60.0% | |
| GGTTTCCAACCAGCCTCCTG+TGG | - | chr4.3:7372997-7373016 | None:intergenic | 60.0% | |
| TCTCGCTTTACCCTCCGACG+TGG | - | chr4.3:7374575-7374594 | None:intergenic | 60.0% | |
| TCTCTCTCGTCCCAGTCCTC+AGG | - | chr4.3:7373336-7373355 | None:intergenic | 60.0% | |
| TGTGAAGCAGCCCCTGGTTG+TGG | + | chr4.3:7373561-7373580 | MS.gene000405:CDS | 60.0% | |
| TTCGACCACAGGAGGCTGGT+TGG | + | chr4.3:7372989-7373008 | MS.gene000405:CDS | 60.0% | |
| ! | GGAGGCTGGTTGGAAACCCA+AGG | + | chr4.3:7372999-7373018 | MS.gene000405:CDS | 60.0% |
| CAGCCCCTGGTTGTGGTGAG+TGG | + | chr4.3:7373568-7373587 | MS.gene000405:CDS | 65.0% | |
| CATCGAAGGCTCCACGTCGG+AGG | + | chr4.3:7374561-7374580 | MS.gene000405:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 7370986 | 7374601 | 7370986 | ID=MS.gene000405 |
| chr4.3 | mRNA | 7370986 | 7374601 | 7370986 | ID=MS.gene000405.t1;Parent=MS.gene000405 |
| chr4.3 | exon | 7370986 | 7371099 | 7370986 | ID=MS.gene000405.t1.exon1;Parent=MS.gene000405.t1 |
| chr4.3 | CDS | 7370986 | 7371099 | 7370986 | ID=cds.MS.gene000405.t1;Parent=MS.gene000405.t1 |
| chr4.3 | exon | 7371214 | 7371283 | 7371214 | ID=MS.gene000405.t1.exon2;Parent=MS.gene000405.t1 |
| chr4.3 | CDS | 7371214 | 7371283 | 7371214 | ID=cds.MS.gene000405.t1;Parent=MS.gene000405.t1 |
| chr4.3 | exon | 7372800 | 7373926 | 7372800 | ID=MS.gene000405.t1.exon3;Parent=MS.gene000405.t1 |
| chr4.3 | CDS | 7372800 | 7373926 | 7372800 | ID=cds.MS.gene000405.t1;Parent=MS.gene000405.t1 |
| chr4.3 | exon | 7374096 | 7374167 | 7374096 | ID=MS.gene000405.t1.exon4;Parent=MS.gene000405.t1 |
| chr4.3 | CDS | 7374096 | 7374167 | 7374096 | ID=cds.MS.gene000405.t1;Parent=MS.gene000405.t1 |
| chr4.3 | exon | 7374275 | 7374391 | 7374275 | ID=MS.gene000405.t1.exon5;Parent=MS.gene000405.t1 |
| chr4.3 | CDS | 7374275 | 7374391 | 7374275 | ID=cds.MS.gene000405.t1;Parent=MS.gene000405.t1 |
| chr4.3 | exon | 7374473 | 7374601 | 7374473 | ID=MS.gene000405.t1.exon6;Parent=MS.gene000405.t1 |
| chr4.3 | CDS | 7374473 | 7374601 | 7374473 | ID=cds.MS.gene000405.t1;Parent=MS.gene000405.t1 |
| Gene Sequence |
| Protein sequence |
