Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000408.t1 | XP_003630450.1 | 98.7 | 540 | 7 | 0 | 1 | 540 | 1 | 540 | 1.60E-210 | 742.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000408.t1 | Q39817 | 86.1 | 481 | 64 | 2 | 1 | 478 | 1 | 481 | 1.3e-160 | 567.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000408.t1 | G7LGJ8 | 98.7 | 540 | 7 | 0 | 1 | 540 | 1 | 540 | 1.2e-210 | 742.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene000408 | MS.gene82400 | PPI |
| MS.gene000408 | MS.gene56457 | PPI |
| MS.gene000408 | MS.gene001347 | PPI |
| MS.gene000408 | MS.gene006869 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000408.t1 | MTR_8g095680 | 98.148 | 540 | 10 | 0 | 1 | 540 | 1 | 540 | 0.0 | 1077 |
| MS.gene000408.t1 | MTR_3g098430 | 78.938 | 546 | 104 | 6 | 1 | 540 | 1 | 541 | 0.0 | 802 |
| MS.gene000408.t1 | MTR_3g098430 | 78.182 | 550 | 106 | 6 | 1 | 540 | 1 | 546 | 0.0 | 798 |
| MS.gene000408.t1 | MTR_1g083960 | 40.526 | 380 | 167 | 13 | 36 | 408 | 26 | 353 | 2.19e-60 | 205 |
| MS.gene000408.t1 | MTR_4g068080 | 34.165 | 401 | 182 | 15 | 15 | 400 | 12 | 345 | 4.12e-59 | 202 |
| MS.gene000408.t1 | MTR_7g080370 | 33.090 | 411 | 199 | 13 | 1 | 400 | 1 | 346 | 9.36e-59 | 201 |
| MS.gene000408.t1 | MTR_7g080370 | 33.090 | 411 | 199 | 13 | 1 | 400 | 1 | 346 | 2.24e-58 | 200 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000408.t1 | AT5G61790 | 73.635 | 531 | 133 | 3 | 11 | 540 | 6 | 530 | 0.0 | 788 |
| MS.gene000408.t1 | AT5G07340 | 74.067 | 509 | 122 | 5 | 34 | 538 | 27 | 529 | 0.0 | 748 |
| MS.gene000408.t1 | AT5G07340 | 74.308 | 506 | 120 | 5 | 37 | 538 | 38 | 537 | 0.0 | 745 |
| MS.gene000408.t1 | AT1G56340 | 39.173 | 411 | 177 | 14 | 5 | 408 | 7 | 351 | 2.44e-61 | 208 |
| MS.gene000408.t1 | AT1G09210 | 38.686 | 411 | 183 | 12 | 5 | 408 | 3 | 351 | 2.68e-61 | 208 |
| MS.gene000408.t1 | AT1G56340 | 39.173 | 411 | 177 | 14 | 5 | 408 | 7 | 351 | 4.63e-61 | 207 |
| MS.gene000408.t1 | AT1G08450 | 34.588 | 425 | 213 | 15 | 12 | 428 | 10 | 377 | 1.06e-58 | 201 |
| MS.gene000408.t1 | AT1G08450 | 31.294 | 425 | 202 | 16 | 12 | 428 | 10 | 352 | 1.50e-43 | 159 |
| MS.gene000408.t1 | AT1G08450 | 36.207 | 232 | 106 | 6 | 197 | 428 | 134 | 323 | 2.35e-27 | 114 |
Find 152 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGGGCTGCTTCACAATT+TGG | 0.117242 | 4.3:-7324866 | None:intergenic |
| AATTGAAAATCCAGCTTATA+AGG | 0.199133 | 4.3:+7324955 | MS.gene000408:CDS |
| CAATTTGGGTTAGTAATCTT+AGG | 0.221903 | 4.3:-7324851 | None:intergenic |
| GGTTTCTTATCTTCAGGATC+TGG | 0.250300 | 4.3:-7324623 | None:intergenic |
| CTCTTTCTCAATAGTAAACT+TGG | 0.257204 | 4.3:-7325161 | None:intergenic |
| AGTGAGGGGCATGAAGATTA+TGG | 0.263277 | 4.3:+7324131 | MS.gene000408:CDS |
| ACCGTTATATTCATTCTTAT+CGG | 0.278275 | 4.3:-7322574 | None:intergenic |
| TCCTCAGGTTTCTTATCTTC+AGG | 0.293756 | 4.3:-7324629 | None:intergenic |
| CAGCTATCGGTATTGAGATT+TGG | 0.301537 | 4.3:+7325050 | MS.gene000408:CDS |
| TCTTCATCGTCCCAATCTTC+TGG | 0.309076 | 4.3:-7324809 | None:intergenic |
| TATGCTGGATTCTTCTTCAT+TGG | 0.315161 | 4.3:-7324908 | None:intergenic |
| TCTCCCTATTCTATCATGTT+TGG | 0.320919 | 4.3:+7324347 | MS.gene000408:CDS |
| ATCCAGCTTATAAGGGTATA+TGG | 0.323335 | 4.3:+7324963 | MS.gene000408:CDS |
| ATCCAGCATACAAGGGAAAA+TGG | 0.325180 | 4.3:+7324921 | MS.gene000408:CDS |
| CTCTCCACTGTCTTGGTTAG+TGG | 0.328971 | 4.3:-7325827 | None:intergenic |
| TTCTGTGCATTCTAGGCATC+TGG | 0.336994 | 4.3:+7324096 | MS.gene000408:intron |
| CAGGGGCTGCTTCACAATTT+GGG | 0.337351 | 4.3:-7324865 | None:intergenic |
| AGCTCAAAGTAATCAGGGTT+TGG | 0.338624 | 4.3:-7325001 | None:intergenic |
| TCAGGATCTGGGATTGTCTT+GGG | 0.366663 | 4.3:-7324611 | None:intergenic |
| GAAACAGAAGGAAGAAGAAA+AGG | 0.367207 | 4.3:+7325183 | MS.gene000408:CDS |
| CTTCATTCTCTCCACTGTCT+TGG | 0.379721 | 4.3:-7325834 | None:intergenic |
| AGCTGCAATAGGCTCAAAAT+CGG | 0.385593 | 4.3:-7325032 | None:intergenic |
| TGACGGGGAACAGAAGAAAA+AGG | 0.390374 | 4.3:+7324544 | MS.gene000408:CDS |
| AGAATCATTGTCGAATTCCT+TGG | 0.403305 | 4.3:-7324327 | None:intergenic |
| TTTGTGGCCCCACACTTGTC+AGG | 0.403994 | 4.3:-7324371 | None:intergenic |
| AATTTGGGTTAGTAATCTTA+GGG | 0.406892 | 4.3:-7324850 | None:intergenic |
| TCATCAGGCTTTACTGCACT+TGG | 0.408900 | 4.3:-7324680 | None:intergenic |
| CAAAATTTGCAACTCATTGT+CGG | 0.409058 | 4.3:-7324519 | None:intergenic |
| TTCAGGATCTGGGATTGTCT+TGG | 0.412629 | 4.3:-7324612 | None:intergenic |
| AAAATTTGCAACTCATTGTC+GGG | 0.414444 | 4.3:-7324518 | None:intergenic |
| GTTTCTTATCTTCAGGATCT+GGG | 0.420391 | 4.3:-7324622 | None:intergenic |
| GGCTTTACTGCACTTGGGTC+GGG | 0.421849 | 4.3:-7324674 | None:intergenic |
| TCATCATCTAACCATCCTTC+AGG | 0.423626 | 4.3:-7324752 | None:intergenic |
| GATTGTCTTGGGAGGGATAA+GGG | 0.435368 | 4.3:-7324600 | None:intergenic |
| TGATGAGCCTGTGATTCTTA+AGG | 0.438519 | 4.3:+7324202 | MS.gene000408:CDS |
| GAATCATTGTCGAATTCCTT+GGG | 0.440765 | 4.3:-7324326 | None:intergenic |
| TCTCTCTCGTCCCAGTCCTC+AGG | 0.441848 | 4.3:-7324644 | None:intergenic |
| AGGACCAAACATGATAGAAT+AGG | 0.444316 | 4.3:-7324351 | None:intergenic |
| CGATGAAGAGGATGGTGAAT+GGG | 0.445046 | 4.3:+7324823 | MS.gene000408:CDS |
| TTTGCAGGATCTCATTGAAA+AGG | 0.448014 | 4.3:+7325582 | MS.gene000408:intron |
| GTGAGGGGCATGAAGATTAT+GGG | 0.448284 | 4.3:+7324132 | MS.gene000408:CDS |
| GCATCCTCATCCCAGTCATC+AGG | 0.452608 | 4.3:-7324695 | None:intergenic |
| TACCGCGTCATCGGCATCAT+CGG | 0.454767 | 4.3:-7322391 | None:intergenic |
| TTCCTTCGTATCGTATTTGG+TGG | 0.456544 | 4.3:+7325670 | MS.gene000408:CDS |
| GGCTACAAAACCAGAAGATT+GGG | 0.458059 | 4.3:+7324799 | MS.gene000408:CDS |
| AGGCTACAAAACCAGAAGAT+TGG | 0.458247 | 4.3:+7324798 | MS.gene000408:CDS |
| ATTGAAAATCCAGCTTATAA+GGG | 0.458787 | 4.3:+7324956 | MS.gene000408:CDS |
| TCAATACCGATAGCTGCAAT+AGG | 0.462507 | 4.3:-7325043 | None:intergenic |
| GTGCAGTAAAGCCTGATGAC+TGG | 0.469031 | 4.3:+7324684 | MS.gene000408:CDS |
| ACGATGAAGAGGATGGTGAA+TGG | 0.471046 | 4.3:+7324822 | MS.gene000408:CDS |
| GAAGAAGAATCCAGCATACA+AGG | 0.471522 | 4.3:+7324913 | MS.gene000408:CDS |
| GGCAAATTTCTTATCTTCTG+AGG | 0.473999 | 4.3:+7324565 | MS.gene000408:CDS |
| GTCTCTTGTGCAGGCAAGAG+TGG | 0.475290 | 4.3:+7325774 | MS.gene000408:intron |
| GGATTGTCTTGGGAGGGATA+AGG | 0.478867 | 4.3:-7324601 | None:intergenic |
| TCAACATACTCCCCACTCTT+CGG | 0.479318 | 4.3:-7324425 | None:intergenic |
| ATAAGATTGCCGCGTCATAC+CGG | 0.480655 | 4.3:+7325122 | MS.gene000408:CDS |
| CTGGTTGTGGTGAGTGGAAA+CGG | 0.483867 | 4.3:+7324885 | MS.gene000408:CDS |
| AGCTTGTCAGAGGGAACAGA+TGG | 0.491925 | 4.3:-7324467 | None:intergenic |
| CGTCATACCGGGAGACTACA+TGG | 0.492103 | 4.3:+7325134 | MS.gene000408:CDS |
| AATGAAGTGCACCTTGTTTG+TGG | 0.492594 | 4.3:-7324387 | None:intergenic |
| TCTGGGTCATCTATCTCCTC+AGG | 0.498032 | 4.3:-7324776 | None:intergenic |
| CTGGGATGAGGATGCACCCT+TGG | 0.500943 | 4.3:+7324703 | MS.gene000408:CDS |
| TTCCATATACCCTTATAAGC+TGG | 0.501975 | 4.3:-7324965 | None:intergenic |
| TTGCAGGATCTCATTGAAAA+GGG | 0.502190 | 4.3:+7325583 | MS.gene000408:intron |
| AGAATTCCAACTGTGAGATT+CGG | 0.503519 | 4.3:-7325616 | None:intergenic |
| AAGATGAATTACCGCGTCAT+CGG | 0.505451 | 4.3:-7322400 | None:intergenic |
| TTCTTCATCAAGAATTTCCA+AGG | 0.505747 | 4.3:-7324720 | None:intergenic |
| CGTTTCCACTCACCACAACC+AGG | 0.506800 | 4.3:-7324884 | None:intergenic |
| TAAGATTGCCGCGTCATACC+GGG | 0.509139 | 4.3:+7325123 | MS.gene000408:CDS |
| CATCATCGGAAGCATGAAGA+AGG | 0.517297 | 4.3:-7322377 | None:intergenic |
| AGGCTTTACTGCACTTGGGT+CGG | 0.517691 | 4.3:-7324675 | None:intergenic |
| AAGATAAGAAACCTGAGGAC+TGG | 0.518095 | 4.3:+7324633 | MS.gene000408:CDS |
| TTTGAGCCTATTGCAGCTAT+CGG | 0.519883 | 4.3:+7325037 | MS.gene000408:CDS |
| TCTTTCTCAATAGTAAACTT+GGG | 0.520577 | 4.3:-7325160 | None:intergenic |
| GGACCAAACATGATAGAATA+GGG | 0.520952 | 4.3:-7324350 | None:intergenic |
| GATATGCACCACCACATTCG+AGG | 0.524176 | 4.3:-7324268 | None:intergenic |
| AAGCTTGTAGGCACTCAGGA+AGG | 0.524251 | 4.3:-7325451 | None:intergenic |
| TAAGGGTATATGGAAGCCTC+AGG | 0.527187 | 4.3:+7324973 | MS.gene000408:CDS |
| TATTGAGATTTGGACAATGC+AGG | 0.530334 | 4.3:+7325060 | MS.gene000408:CDS |
| TGTGAAGCAGCCCCTGGTTG+TGG | 0.538010 | 4.3:+7324872 | MS.gene000408:CDS |
| TTAGTGGAAGTTTCTGCGGC+GGG | 0.539110 | 4.3:-7325811 | None:intergenic |
| TCCGATAAGAATGAATATAA+CGG | 0.541713 | 4.3:+7322573 | MS.gene000408:CDS |
| TTTGAGACTCGCCTTCAGAA+TGG | 0.542633 | 4.3:+7324245 | MS.gene000408:CDS |
| TGTTTGGTCCTGACAAGTGT+GGG | 0.544403 | 4.3:+7324363 | MS.gene000408:CDS |
| GATTGGGACGATGAAGAGGA+TGG | 0.545919 | 4.3:+7324815 | MS.gene000408:CDS |
| GATTCATCCTTAAGAATCAC+AGG | 0.546646 | 4.3:-7324209 | None:intergenic |
| GAATGAAGAAAACAAAGAGG+AGG | 0.550444 | 4.3:+7325849 | MS.gene000408:CDS |
| CCAAATTGTGAAGCAGCCCC+TGG | 0.552013 | 4.3:+7324866 | MS.gene000408:CDS |
| CTTCTACGAATCATTTGATG+AGG | 0.552271 | 4.3:+7322527 | MS.gene000408:CDS |
| GCTGCAATAGGCTCAAAATC+GGG | 0.552533 | 4.3:-7325031 | None:intergenic |
| GAACGAAAGCGAATTCCTCT+CGG | 0.553910 | 4.3:+7322309 | MS.gene000408:CDS |
| CAGCCCCTGGTTGTGGTGAG+TGG | 0.555593 | 4.3:+7324879 | MS.gene000408:CDS |
| TATCTTCGACCACAGGAGGC+TGG | 0.558917 | 4.3:+7324296 | MS.gene000408:CDS |
| TGGAATTCTTGTAGCCGTTG+TGG | 0.561141 | 4.3:+7325630 | MS.gene000408:CDS |
| TTCGACCACAGGAGGCTGGT+TGG | 0.565629 | 4.3:+7324300 | MS.gene000408:CDS |
| CACATTCGAGGCCATTCTGA+AGG | 0.570634 | 4.3:-7324256 | None:intergenic |
| TGCAGTAAAGCCTGATGACT+GGG | 0.572111 | 4.3:+7324685 | MS.gene000408:CDS |
| CAAGTGTGGGGCCACAAACA+AGG | 0.573921 | 4.3:+7324376 | MS.gene000408:CDS |
| ATCGAAGGCTCCACGTCGGA+GGG | 0.574361 | 4.3:+7325876 | MS.gene000408:CDS |
| GGATCTGGGATTGTCTTGGG+AGG | 0.575634 | 4.3:-7324608 | None:intergenic |
| TCCTTCGTATCGTATTTGGT+GGG | 0.575662 | 4.3:+7325671 | MS.gene000408:CDS |
| TGGGCTTCCATGTAGTCTCC+CGG | 0.577142 | 4.3:-7325141 | None:intergenic |
| GGTTTCCAACCAGCCTCCTG+TGG | 0.577641 | 4.3:-7324305 | None:intergenic |
| AGAGAATGAAGAAAACAAAG+AGG | 0.578426 | 4.3:+7325846 | MS.gene000408:CDS |
| AGATAAGAAACCTGAGGACT+GGG | 0.579804 | 4.3:+7324634 | MS.gene000408:CDS |
| ACGCAGCCGAATCTCACAGT+TGG | 0.579809 | 4.3:+7325610 | MS.gene000408:CDS |
| CTTCAGAATGGCCTCGAATG+TGG | 0.579974 | 4.3:+7324257 | MS.gene000408:CDS |
| AGCTTGTAGGCACTCAGGAA+GGG | 0.580489 | 4.3:-7325450 | None:intergenic |
| ATGTTTGGTCCTGACAAGTG+TGG | 0.588377 | 4.3:+7324362 | MS.gene000408:CDS |
| GCTTGTCAGAGGGAACAGAT+GGG | 0.589147 | 4.3:-7324466 | None:intergenic |
| AGAAGATTGGGACGATGAAG+AGG | 0.591248 | 4.3:+7324811 | MS.gene000408:CDS |
| CTGGAAGCATTCAAAGAGTG+AGG | 0.591782 | 4.3:+7324115 | MS.gene000408:CDS |
| TTGGTTAGTGGAAGTTTCTG+CGG | 0.593316 | 4.3:-7325815 | None:intergenic |
| CATCGAAGGCTCCACGTCGG+AGG | 0.595933 | 4.3:+7325875 | MS.gene000408:CDS |
| TCTAAAATATCTTCGACCAC+AGG | 0.596292 | 4.3:+7324289 | MS.gene000408:CDS |
| CATCAGGCTTTACTGCACTT+GGG | 0.599406 | 4.3:-7324679 | None:intergenic |
| TGGAAGCATTCAAAGAGTGA+GGG | 0.600050 | 4.3:+7324116 | MS.gene000408:CDS |
| GTTAGTGGAAGTTTCTGCGG+CGG | 0.603337 | 4.3:-7325812 | None:intergenic |
| CTTGTCAGAGGGAACAGATG+GGG | 0.612571 | 4.3:-7324465 | None:intergenic |
| AAGCTGTGAAACCTGAAGGA+TGG | 0.618409 | 4.3:+7324741 | MS.gene000408:CDS |
| GTCTTGGGAGGGATAAGGGA+AGG | 0.622855 | 4.3:-7324596 | None:intergenic |
| CACGTGAGATAGCTTGTCAG+AGG | 0.622862 | 4.3:-7324477 | None:intergenic |
| AAAATATCTTCGACCACAGG+AGG | 0.623259 | 4.3:+7324292 | MS.gene000408:CDS |
| TATTGAGAAAGAGAAACAGA+AGG | 0.623870 | 4.3:+7325171 | MS.gene000408:CDS |
| TTGTCAGAGGGAACAGATGG+GGG | 0.626548 | 4.3:-7324464 | None:intergenic |
| TTTCCACTCACCACAACCAG+GGG | 0.634593 | 4.3:-7324882 | None:intergenic |
| TCTTCATCAAGAATTTCCAA+GGG | 0.634894 | 4.3:-7324719 | None:intergenic |
| GTTTCCACTCACCACAACCA+GGG | 0.635541 | 4.3:-7324883 | None:intergenic |
| CAAAGAGGAGGAAACATCGA+AGG | 0.636270 | 4.3:+7325861 | MS.gene000408:CDS |
| ATTTGGGTTAGTAATCTTAG+GGG | 0.637193 | 4.3:-7324849 | None:intergenic |
| TCAGGGTTTGGAATATCCTG+AGG | 0.637275 | 4.3:-7324989 | None:intergenic |
| GAAAAGGACACTGAATCAAG+TGG | 0.639039 | 4.3:+7325199 | MS.gene000408:CDS |
| GAGATTTGGACAATGCAGGA+TGG | 0.641655 | 4.3:+7325064 | MS.gene000408:CDS |
| AAAGCCTGATGACTGGGATG+AGG | 0.642158 | 4.3:+7324691 | MS.gene000408:CDS |
| TTCCGATGATGCCGATGACG+CGG | 0.642498 | 4.3:+7322389 | MS.gene000408:CDS |
| TCCCACCAAATACGATACGA+AGG | 0.645566 | 4.3:-7325672 | None:intergenic |
| GGAGGCTGGTTGGAAACCCA+AGG | 0.645830 | 4.3:+7324310 | MS.gene000408:CDS |
| AAGAAGAATCCAGCATACAA+GGG | 0.648479 | 4.3:+7324914 | MS.gene000408:CDS |
| GGAAGCATTCAAAGAGTGAG+GGG | 0.655093 | 4.3:+7324117 | MS.gene000408:CDS |
| TCCTGAAGATAAGAAACCTG+AGG | 0.657027 | 4.3:+7324628 | MS.gene000408:CDS |
| ATGGTTAGATGATGAGCCTG+AGG | 0.657489 | 4.3:+7324760 | MS.gene000408:CDS |
| CAGAATGGCCTCGAATGTGG+TGG | 0.657663 | 4.3:+7324260 | MS.gene000408:CDS |
| GATCTGGGATTGTCTTGGGA+GGG | 0.659461 | 4.3:-7324607 | None:intergenic |
| TCTCGCTTTACCCTCCGACG+TGG | 0.660404 | 4.3:-7325886 | None:intergenic |
| TGTAGTCTCCCGGTATGACG+CGG | 0.661561 | 4.3:-7325131 | None:intergenic |
| GAAGAAGCTGTGAAACCTGA+AGG | 0.662222 | 4.3:+7324737 | MS.gene000408:CDS |
| GTTTGGTCCTGACAAGTGTG+GGG | 0.685526 | 4.3:+7324364 | MS.gene000408:CDS |
| TGAGGAGATAGATGACCCAG+AGG | 0.689200 | 4.3:+7324778 | MS.gene000408:CDS |
| ACGTGAGATAGCTTGTCAGA+GGG | 0.689496 | 4.3:-7324476 | None:intergenic |
| ACTTCCACTAACCAAGACAG+TGG | 0.694252 | 4.3:+7325823 | MS.gene000408:CDS |
| TGTCAAGACAATAACCACAA+CGG | 0.738680 | 4.3:-7325644 | None:intergenic |
| AAACATCGAAGGCTCCACGT+CGG | 0.757199 | 4.3:+7325872 | MS.gene000408:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTTATAGAATATAATAT+TGG | + | chr4.3:7323665-7323684 | MS.gene000408:intron | 10.0% |
| !! | ATTTATAAAAAAAAACATAC+AGG | + | chr4.3:7323205-7323224 | MS.gene000408:intron | 10.0% |
| !!! | ATTGATTTTGTTAATTTTTT+TGG | + | chr4.3:7322717-7322736 | MS.gene000408:intron | 10.0% |
| !!! | ATTTTTATTTACAAAAAGAT+TGG | + | chr4.3:7322980-7322999 | MS.gene000408:intron | 10.0% |
| !!! | GTATGTTTTTTTTTATAAAT+AGG | - | chr4.3:7323205-7323224 | None:intergenic | 10.0% |
| !! | AATAATAAATATTGTCATCA+AGG | - | chr4.3:7323009-7323028 | None:intergenic | 15.0% |
| !! | TTTCAAAAAAAAATTCTTGT+AGG | + | chr4.3:7322785-7322804 | MS.gene000408:intron | 15.0% |
| !! | TTTCATTAATTGTGAATTAA+TGG | + | chr4.3:7322641-7322660 | MS.gene000408:intron | 15.0% |
| !!! | ACTATTTTTGACAAAAAAAT+TGG | - | chr4.3:7323242-7323261 | None:intergenic | 15.0% |
| !!! | TTTTGAAATAGATTTGAAAT+TGG | - | chr4.3:7322773-7322792 | None:intergenic | 15.0% |
| !! | ATATTCTATAACTATTTCAG+AGG | - | chr4.3:7323660-7323679 | None:intergenic | 20.0% |
| !! | ATGATTATGAAAATAAGAGT+CGG | + | chr4.3:7323751-7323770 | MS.gene000408:intron | 20.0% |
| !! | TAGAATATAATATTGGAAAG+TGG | + | chr4.3:7323672-7323691 | MS.gene000408:intron | 20.0% |
| !! | TATTCTATAACTATTTCAGA+GGG | - | chr4.3:7323659-7323678 | None:intergenic | 20.0% |
| !! | TTTAACAGTATATGTATTTG+TGG | + | chr4.3:7323705-7323724 | MS.gene000408:intron | 20.0% |
| !!! | TTCAACTTTAATTTTTCAAG+TGG | + | chr4.3:7323438-7323457 | MS.gene000408:intron | 20.0% |
| ! | AAGTAAAATCATGCATAAGA+AGG | - | chr4.3:7325378-7325397 | None:intergenic | 25.0% |
| ! | AATTGAAAATCCAGCTTATA+AGG | + | chr4.3:7324955-7324974 | MS.gene000408:CDS | 25.0% |
| ! | ACCGTTATATTCATTCTTAT+CGG | - | chr4.3:7322577-7322596 | None:intergenic | 25.0% |
| ! | ATTGAAAATCCAGCTTATAA+GGG | + | chr4.3:7324956-7324975 | MS.gene000408:CDS | 25.0% |
| ! | ATTTCCTATATGTTAATCAC+CGG | + | chr4.3:7325746-7325765 | MS.gene000408:intron | 25.0% |
| ! | CCTTTCTTAGAAAATATGAT+TGG | - | chr4.3:7323802-7323821 | None:intergenic | 25.0% |
| ! | TAGTATAAGCCATTGATAAA+GGG | - | chr4.3:7323356-7323375 | None:intergenic | 25.0% |
| ! | TCCGATAAGAATGAATATAA+CGG | + | chr4.3:7322573-7322592 | MS.gene000408:CDS | 25.0% |
| ! | TCTTTCTCAATAGTAAACTT+GGG | - | chr4.3:7325163-7325182 | None:intergenic | 25.0% |
| ! | TTAGTATAAGCCATTGATAA+AGG | - | chr4.3:7323357-7323376 | None:intergenic | 25.0% |
| ! | TTGTTAGCATATCTTAAACA+AGG | + | chr4.3:7323468-7323487 | MS.gene000408:intron | 25.0% |
| !! | AAAAAATTCTTGTAGGTTGA+AGG | + | chr4.3:7322792-7322811 | MS.gene000408:intron | 25.0% |
| !! | AAATGATAACAGAGTTGTTT+TGG | - | chr4.3:7325730-7325749 | None:intergenic | 25.0% |
| !! | ATAAGCTGGATTTTCAATTA+GGG | - | chr4.3:7324954-7324973 | None:intergenic | 25.0% |
| !! | GTTTGTTTGATGATTGAATT+TGG | + | chr4.3:7322441-7322460 | MS.gene000408:intron | 25.0% |
| !! | TATAAGCTGGATTTTCAATT+AGG | - | chr4.3:7324955-7324974 | None:intergenic | 25.0% |
| !! | TTGTTTAAGATATGCTAACA+AGG | - | chr4.3:7323469-7323488 | None:intergenic | 25.0% |
| !! | TTTTAAGCTCAAAGTAATCA+GGG | - | chr4.3:7325009-7325028 | None:intergenic | 25.0% |
| !! | TTTTTATGAGGCTTAAATTG+AGG | + | chr4.3:7322474-7322493 | MS.gene000408:intron | 25.0% |
| !!! | AAACAAACAAGAGTATTTGT+TGG | + | chr4.3:7322859-7322878 | MS.gene000408:intron | 25.0% |
| !!! | AAAGCTAAATTTTAAGGACA+AGG | - | chr4.3:7323919-7323938 | None:intergenic | 25.0% |
| !!! | AATTTGGGTTAGTAATCTTA+GGG | - | chr4.3:7324853-7324872 | None:intergenic | 25.0% |
| !!! | CATCTTCTCTCTTTTTTTTT+TGG | + | chr4.3:7322417-7322436 | MS.gene000408:intron | 25.0% |
| !!! | CCAATCATATTTTCTAAGAA+AGG | + | chr4.3:7323799-7323818 | MS.gene000408:intron | 25.0% |
| !!! | CTTTAATTTTTCAAGTGGTA+CGG | + | chr4.3:7323443-7323462 | MS.gene000408:intron | 25.0% |
| !!! | TACATGTATTTTAAGCTTGT+AGG | - | chr4.3:7325466-7325485 | None:intergenic | 25.0% |
| !!! | TCTAATTTGTTAAACACGAA+AGG | - | chr4.3:7323039-7323058 | None:intergenic | 25.0% |
| !!! | TTTTTAAGCTCAAAGTAATC+AGG | - | chr4.3:7325010-7325029 | None:intergenic | 25.0% |
| AAAATTTGCAACTCATTGTC+GGG | - | chr4.3:7324521-7324540 | None:intergenic | 30.0% | |
| AAATGCTAATGTGTTTCCTT+AGG | + | chr4.3:7323147-7323166 | MS.gene000408:intron | 30.0% | |
| AAATGGTAAAAAGCAACATG+TGG | - | chr4.3:7323294-7323313 | None:intergenic | 30.0% | |
| AACATTCCTCTCTACTTATA+AGG | - | chr4.3:7323078-7323097 | None:intergenic | 30.0% | |
| AACTATGGCCTAAAAGTAAT+TGG | + | chr4.3:7323122-7323141 | MS.gene000408:intron | 30.0% | |
| AATGCTAATGTGTTTCCTTA+GGG | + | chr4.3:7323148-7323167 | MS.gene000408:intron | 30.0% | |
| ACTCTTGAAAAGTAGTATAG+TGG | + | chr4.3:7322943-7322962 | MS.gene000408:intron | 30.0% | |
| AGAGAATGAAGAAAACAAAG+AGG | + | chr4.3:7325846-7325865 | MS.gene000408:CDS | 30.0% | |
| AGATGTAATGTTTCACTTTG+TGG | + | chr4.3:7325535-7325554 | MS.gene000408:intron | 30.0% | |
| ATCAAGTCACTATAACTGAA+GGG | - | chr4.3:7324034-7324053 | None:intergenic | 30.0% | |
| CAAAATTTGCAACTCATTGT+CGG | - | chr4.3:7324522-7324541 | None:intergenic | 30.0% | |
| CTCTACTTATAAGGATGTAA+GGG | - | chr4.3:7323069-7323088 | None:intergenic | 30.0% | |
| CTCTTTCTCAATAGTAAACT+TGG | - | chr4.3:7325164-7325183 | None:intergenic | 30.0% | |
| TAAAATCATGCATAAGAAGG+AGG | - | chr4.3:7325375-7325394 | None:intergenic | 30.0% | |
| TATCAAGTCACTATAACTGA+AGG | - | chr4.3:7324035-7324054 | None:intergenic | 30.0% | |
| TATTGAGAAAGAGAAACAGA+AGG | + | chr4.3:7325171-7325190 | MS.gene000408:CDS | 30.0% | |
| TCTCTACTTATAAGGATGTA+AGG | - | chr4.3:7323070-7323089 | None:intergenic | 30.0% | |
| TCTTCATCAAGAATTTCCAA+GGG | - | chr4.3:7324722-7324741 | None:intergenic | 30.0% | |
| TGTGTAGATTCACAAATTTC+TGG | + | chr4.3:7323828-7323847 | MS.gene000408:intron | 30.0% | |
| TTACATCCTTATAAGTAGAG+AGG | + | chr4.3:7323069-7323088 | MS.gene000408:intron | 30.0% | |
| TTCTTCATCAAGAATTTCCA+AGG | - | chr4.3:7324723-7324742 | None:intergenic | 30.0% | |
| TTGTGAATTAATGGAACATG+CGG | + | chr4.3:7322650-7322669 | MS.gene000408:intron | 30.0% | |
| TTTACCATTTGCTTGTGTAA+GGG | + | chr4.3:7323304-7323323 | MS.gene000408:intron | 30.0% | |
| ! | CCATGCAAAGCTAAATTTTA+AGG | - | chr4.3:7323925-7323944 | None:intergenic | 30.0% |
| ! | TAAGCTGGATTTTCAATTAG+GGG | - | chr4.3:7324953-7324972 | None:intergenic | 30.0% |
| ! | TTTTACCATTTGCTTGTGTA+AGG | + | chr4.3:7323303-7323322 | MS.gene000408:intron | 30.0% |
| !! | ATTTGGGTTAGTAATCTTAG+GGG | - | chr4.3:7324852-7324871 | None:intergenic | 30.0% |
| !! | CAATTTGGGTTAGTAATCTT+AGG | - | chr4.3:7324854-7324873 | None:intergenic | 30.0% |
| !! | CCTTAAAATTTAGCTTTGCA+TGG | + | chr4.3:7323922-7323941 | MS.gene000408:intron | 30.0% |
| !! | GCATTTCACCAATTACTTTT+AGG | - | chr4.3:7323133-7323152 | None:intergenic | 30.0% |
| !!! | ACAAATTTCTGGTACTTTTG+TGG | + | chr4.3:7323839-7323858 | MS.gene000408:intron | 30.0% |
| !!! | AGTTGCAAATTTTGATTGAC+GGG | + | chr4.3:7324528-7324547 | MS.gene000408:CDS | 30.0% |
| !!! | GAGTTGCAAATTTTGATTGA+CGG | + | chr4.3:7324527-7324546 | MS.gene000408:CDS | 30.0% |
| !!! | GGATCTATGTTGTTTTTATG+AGG | + | chr4.3:7322462-7322481 | MS.gene000408:intron | 30.0% |
| AAAACCCTTACACAAGCAAA+TGG | - | chr4.3:7323311-7323330 | None:intergenic | 35.0% | |
| AAGAAGAATCCAGCATACAA+GGG | + | chr4.3:7324914-7324933 | MS.gene000408:CDS | 35.0% | |
| AAGACCAGACAAAAAACAGT+AGG | - | chr4.3:7325334-7325353 | None:intergenic | 35.0% | |
| AAGCATAAAAATCCGAAGAG+TGG | + | chr4.3:7324413-7324432 | MS.gene000408:CDS | 35.0% | |
| AATGCTAACAACTGCTTTCA+TGG | + | chr4.3:7323493-7323512 | MS.gene000408:intron | 35.0% | |
| ACTGTTTCCTTAGATTTGCA+TGG | + | chr4.3:7323890-7323909 | MS.gene000408:intron | 35.0% | |
| AGAATCATTGTCGAATTCCT+TGG | - | chr4.3:7324330-7324349 | None:intergenic | 35.0% | |
| AGAATTCCAACTGTGAGATT+CGG | - | chr4.3:7325619-7325638 | None:intergenic | 35.0% | |
| AGCATAAAAATCCGAAGAGT+GGG | + | chr4.3:7324414-7324433 | MS.gene000408:CDS | 35.0% | |
| AGCATACATGTAATGTCATC+TGG | + | chr4.3:7325229-7325248 | MS.gene000408:intron | 35.0% | |
| AGGACCAAACATGATAGAAT+AGG | - | chr4.3:7324354-7324373 | None:intergenic | 35.0% | |
| ATCAAATACCTTCTTCTGCA+AGG | - | chr4.3:7325406-7325425 | None:intergenic | 35.0% | |
| CAAAAACATGAACCTAGAGA+AGG | - | chr4.3:7323948-7323967 | None:intergenic | 35.0% | |
| CTTCTACGAATCATTTGATG+AGG | + | chr4.3:7322527-7322546 | MS.gene000408:CDS | 35.0% | |
| GAAACAGAAGGAAGAAGAAA+AGG | + | chr4.3:7325183-7325202 | MS.gene000408:CDS | 35.0% | |
| GAATCATTGTCGAATTCCTT+GGG | - | chr4.3:7324329-7324348 | None:intergenic | 35.0% | |
| GAATGAAGAAAACAAAGAGG+AGG | + | chr4.3:7325849-7325868 | MS.gene000408:CDS | 35.0% | |
| GATTCATCCTTAAGAATCAC+AGG | - | chr4.3:7324212-7324231 | None:intergenic | 35.0% | |
| GGACCAAACATGATAGAATA+GGG | - | chr4.3:7324353-7324372 | None:intergenic | 35.0% | |
| GGCAAATTTCTTATCTTCTG+AGG | + | chr4.3:7324565-7324584 | MS.gene000408:CDS | 35.0% | |
| GTTTCTTATCTTCAGGATCT+GGG | - | chr4.3:7324625-7324644 | None:intergenic | 35.0% | |
| TATGCTGGATTCTTCTTCAT+TGG | - | chr4.3:7324911-7324930 | None:intergenic | 35.0% | |
| TATTGAGATTTGGACAATGC+AGG | + | chr4.3:7325060-7325079 | MS.gene000408:CDS | 35.0% | |
| TCAAATACCTTCTTCTGCAA+GGG | - | chr4.3:7325405-7325424 | None:intergenic | 35.0% | |
| TCTCCCTATTCTATCATGTT+TGG | + | chr4.3:7324347-7324366 | MS.gene000408:CDS | 35.0% | |
| TGATCCGGTGATTAACATAT+AGG | - | chr4.3:7325753-7325772 | None:intergenic | 35.0% | |
| TGTCAAGACAATAACCACAA+CGG | - | chr4.3:7325647-7325666 | None:intergenic | 35.0% | |
| TTAACACGTCCCTTTATCAA+TGG | + | chr4.3:7323344-7323363 | MS.gene000408:intron | 35.0% | |
| TTCCATATACCCTTATAAGC+TGG | - | chr4.3:7324968-7324987 | None:intergenic | 35.0% | |
| TTGCAGGATCTCATTGAAAA+GGG | + | chr4.3:7325583-7325602 | MS.gene000408:intron | 35.0% | |
| TTGTTAAACACGAAAGGAGT+CGG | - | chr4.3:7323033-7323052 | None:intergenic | 35.0% | |
| TTTGCAGGATCTCATTGAAA+AGG | + | chr4.3:7325582-7325601 | MS.gene000408:intron | 35.0% | |
| ! | AAGCTGGATTTTCAATTAGG+GGG | - | chr4.3:7324952-7324971 | None:intergenic | 35.0% |
| ! | AAGGTATCCATGCAAATCTA+AGG | - | chr4.3:7323900-7323919 | None:intergenic | 35.0% |
| ! | ATCCAGCTTATAAGGGTATA+TGG | + | chr4.3:7324963-7324982 | MS.gene000408:CDS | 35.0% |
| ! | CTCAACTCACTTTCTTCTTT+TGG | + | chr4.3:7322612-7322631 | MS.gene000408:intron | 35.0% |
| ! | GTATTTGTTGGACACATGAT+TGG | + | chr4.3:7322871-7322890 | MS.gene000408:intron | 35.0% |
| ! | GTTTTCCTTCGTATCGTATT+TGG | + | chr4.3:7325667-7325686 | MS.gene000408:CDS | 35.0% |
| ! | TCTAAAATATCTTCGACCAC+AGG | + | chr4.3:7324289-7324308 | MS.gene000408:CDS | 35.0% |
| !! | ATGAGGATTTTGATGATCGT+TGG | + | chr4.3:7322544-7322563 | MS.gene000408:CDS | 35.0% |
| !! | TGAATTCTGTGTTGATTTGC+AGG | + | chr4.3:7325567-7325586 | MS.gene000408:intron | 35.0% |
| !! | TGATTTGTTCTGTGCATTCT+AGG | + | chr4.3:7324089-7324108 | MS.gene000408:intron | 35.0% |
| !! | TTTCTGGTACTTTTGTGGAA+TGG | + | chr4.3:7323844-7323863 | MS.gene000408:intron | 35.0% |
| !!! | GTTGCAAATTTTGATTGACG+GGG | + | chr4.3:7324529-7324548 | MS.gene000408:CDS | 35.0% |
| AAAAGCAAATCTTCCTGCTG+TGG | + | chr4.3:7325496-7325515 | MS.gene000408:intron | 40.0% | |
| AAAATATCTTCGACCACAGG+AGG | + | chr4.3:7324292-7324311 | MS.gene000408:CDS | 40.0% | |
| AAGATAAGAAACCTGAGGAC+TGG | + | chr4.3:7324633-7324652 | MS.gene000408:CDS | 40.0% | |
| AAGATGAATTACCGCGTCAT+CGG | - | chr4.3:7322403-7322422 | None:intergenic | 40.0% | |
| AATGTGTTTCCTTAGGGAGT+TGG | + | chr4.3:7323154-7323173 | MS.gene000408:intron | 40.0% | |
| ACTATAACTGAAGGGAGATG+TGG | - | chr4.3:7324026-7324045 | None:intergenic | 40.0% | |
| AGATAAGAAACCTGAGGACT+GGG | + | chr4.3:7324634-7324653 | MS.gene000408:CDS | 40.0% | |
| AGCTCAAAGTAATCAGGGTT+TGG | - | chr4.3:7325004-7325023 | None:intergenic | 40.0% | |
| AGCTGCAATAGGCTCAAAAT+CGG | - | chr4.3:7325035-7325054 | None:intergenic | 40.0% | |
| AGGCTACAAAACCAGAAGAT+TGG | + | chr4.3:7324798-7324817 | MS.gene000408:CDS | 40.0% | |
| ATCCAGCATACAAGGGAAAA+TGG | + | chr4.3:7324921-7324940 | MS.gene000408:CDS | 40.0% | |
| ATTCCTTAACCAACTCCCTA+AGG | - | chr4.3:7323166-7323185 | None:intergenic | 40.0% | |
| CAATATGCACCAACTACCAA+GGG | - | chr4.3:7323981-7324000 | None:intergenic | 40.0% | |
| GAAAAGGACACTGAATCAAG+TGG | + | chr4.3:7325199-7325218 | MS.gene000408:CDS | 40.0% | |
| GAAGAAGAATCCAGCATACA+AGG | + | chr4.3:7324913-7324932 | MS.gene000408:CDS | 40.0% | |
| GAATGTTCAGACTTTAGGTG+AGG | + | chr4.3:7323091-7323110 | MS.gene000408:intron | 40.0% | |
| GAGAGGAATGTTCAGACTTT+AGG | + | chr4.3:7323086-7323105 | MS.gene000408:intron | 40.0% | |
| GCATAAAAATCCGAAGAGTG+GGG | + | chr4.3:7324415-7324434 | MS.gene000408:CDS | 40.0% | |
| GGCTACAAAACCAGAAGATT+GGG | + | chr4.3:7324799-7324818 | MS.gene000408:CDS | 40.0% | |
| GGTGAGGTGAATGTAAACTA+TGG | + | chr4.3:7323107-7323126 | MS.gene000408:intron | 40.0% | |
| GGTTTCTTATCTTCAGGATC+TGG | - | chr4.3:7324626-7324645 | None:intergenic | 40.0% | |
| TACAGGGAGTTTCTACTTAC+TGG | - | chr4.3:7325706-7325725 | None:intergenic | 40.0% | |
| TCAATACCGATAGCTGCAAT+AGG | - | chr4.3:7325046-7325065 | None:intergenic | 40.0% | |
| TCATCATCTAACCATCCTTC+AGG | - | chr4.3:7324755-7324774 | None:intergenic | 40.0% | |
| TCCTCAGGTTTCTTATCTTC+AGG | - | chr4.3:7324632-7324651 | None:intergenic | 40.0% | |
| TCCTGAAGATAAGAAACCTG+AGG | + | chr4.3:7324628-7324647 | MS.gene000408:CDS | 40.0% | |
| TCCTTCGTATCGTATTTGGT+GGG | + | chr4.3:7325671-7325690 | MS.gene000408:CDS | 40.0% | |
| TGATGAGCCTGTGATTCTTA+AGG | + | chr4.3:7324202-7324221 | MS.gene000408:CDS | 40.0% | |
| TGTTAAACACGAAAGGAGTC+GGG | - | chr4.3:7323032-7323051 | None:intergenic | 40.0% | |
| TTCCTTCGTATCGTATTTGG+TGG | + | chr4.3:7325670-7325689 | MS.gene000408:CDS | 40.0% | |
| TTGGTTAGTGGAAGTTTCTG+CGG | - | chr4.3:7325818-7325837 | None:intergenic | 40.0% | |
| TTTGAGCCTATTGCAGCTAT+CGG | + | chr4.3:7325037-7325056 | MS.gene000408:CDS | 40.0% | |
| ! | AATGAAGTGCACCTTGTTTG+TGG | - | chr4.3:7324390-7324409 | None:intergenic | 40.0% |
| ! | AGCTGGATTTTCAATTAGGG+GGG | - | chr4.3:7324951-7324970 | None:intergenic | 40.0% |
| ! | CAGCTATCGGTATTGAGATT+TGG | + | chr4.3:7325050-7325069 | MS.gene000408:CDS | 40.0% |
| ! | TTTCCTTAGGGAGTTGGTTA+AGG | + | chr4.3:7323160-7323179 | MS.gene000408:intron | 40.0% |
| ! | TTTTAAGCTTGTAGGCACTC+AGG | - | chr4.3:7325458-7325477 | None:intergenic | 40.0% |
| ! | TTTTTGCTCGTTAGTTCCCT+TGG | + | chr4.3:7323962-7323981 | MS.gene000408:intron | 40.0% |
| !! | TGGAAGCATTCAAAGAGTGA+GGG | + | chr4.3:7324116-7324135 | MS.gene000408:CDS | 40.0% |
| !!! | AACAGAGTTGTTTTGGCTAC+AGG | - | chr4.3:7325723-7325742 | None:intergenic | 40.0% |
| !!! | ACAGAGTTGTTTTGGCTACA+GGG | - | chr4.3:7325722-7325741 | None:intergenic | 40.0% |
| !!! | CTCTCCTACTGTTTTTTGTC+TGG | + | chr4.3:7325327-7325346 | MS.gene000408:intron | 40.0% |
| AACAACTGCTTTCATGGCAC+TGG | + | chr4.3:7323499-7323518 | MS.gene000408:intron | 45.0% | |
| AAGCTGTGAAACCTGAAGGA+TGG | + | chr4.3:7324741-7324760 | MS.gene000408:CDS | 45.0% | |
| ACGATGAAGAGGATGGTGAA+TGG | + | chr4.3:7324822-7324841 | MS.gene000408:CDS | 45.0% | |
| ACTTCCACTAACCAAGACAG+TGG | + | chr4.3:7325823-7325842 | MS.gene000408:CDS | 45.0% | |
| AGAAGATTGGGACGATGAAG+AGG | + | chr4.3:7324811-7324830 | MS.gene000408:CDS | 45.0% | |
| AGCACTGCAAAAATTCCGAG+AGG | - | chr4.3:7322327-7322346 | None:intergenic | 45.0% | |
| AGTGAATCAAATGCCACAGC+AGG | - | chr4.3:7325512-7325531 | None:intergenic | 45.0% | |
| ATAAGATTGCCGCGTCATAC+CGG | + | chr4.3:7325122-7325141 | MS.gene000408:CDS | 45.0% | |
| ATGGTTAGATGATGAGCCTG+AGG | + | chr4.3:7324760-7324779 | MS.gene000408:CDS | 45.0% | |
| ATGTTTGGTCCTGACAAGTG+TGG | + | chr4.3:7324362-7324381 | MS.gene000408:CDS | 45.0% | |
| CAAAGAGGAGGAAACATCGA+AGG | + | chr4.3:7325861-7325880 | MS.gene000408:CDS | 45.0% | |
| CATCAGGCTTTACTGCACTT+GGG | - | chr4.3:7324682-7324701 | None:intergenic | 45.0% | |
| CCAATATGCACCAACTACCA+AGG | - | chr4.3:7323982-7324001 | None:intergenic | 45.0% | |
| CGATGAAGAGGATGGTGAAT+GGG | + | chr4.3:7324823-7324842 | MS.gene000408:CDS | 45.0% | |
| CTTCATTCTCTCCACTGTCT+TGG | - | chr4.3:7325837-7325856 | None:intergenic | 45.0% | |
| GAACGAAAGCGAATTCCTCT+CGG | + | chr4.3:7322309-7322328 | MS.gene000408:CDS | 45.0% | |
| GAAGAAGCTGTGAAACCTGA+AGG | + | chr4.3:7324737-7324756 | MS.gene000408:CDS | 45.0% | |
| GAGATTTGGACAATGCAGGA+TGG | + | chr4.3:7325064-7325083 | MS.gene000408:CDS | 45.0% | |
| GATTGTCTTGGGAGGGATAA+GGG | - | chr4.3:7324603-7324622 | None:intergenic | 45.0% | |
| GCTGCAATAGGCTCAAAATC+GGG | - | chr4.3:7325034-7325053 | None:intergenic | 45.0% | |
| TCAACATACTCCCCACTCTT+CGG | - | chr4.3:7324428-7324447 | None:intergenic | 45.0% | |
| TCATCAGGCTTTACTGCACT+TGG | - | chr4.3:7324683-7324702 | None:intergenic | 45.0% | |
| TCCCACCAAATACGATACGA+AGG | - | chr4.3:7325675-7325694 | None:intergenic | 45.0% | |
| TCTTCATCGTCCCAATCTTC+TGG | - | chr4.3:7324812-7324831 | None:intergenic | 45.0% | |
| TGACGGGGAACAGAAGAAAA+AGG | + | chr4.3:7324544-7324563 | MS.gene000408:CDS | 45.0% | |
| TGCAGTAAAGCCTGATGACT+GGG | + | chr4.3:7324685-7324704 | MS.gene000408:CDS | 45.0% | |
| TGGAATTCTTGTAGCCGTTG+TGG | + | chr4.3:7325630-7325649 | MS.gene000408:CDS | 45.0% | |
| TGTTTGGTCCTGACAAGTGT+GGG | + | chr4.3:7324363-7324382 | MS.gene000408:CDS | 45.0% | |
| TTCTGTGCATTCTAGGCATC+TGG | + | chr4.3:7324096-7324115 | MS.gene000408:intron | 45.0% | |
| ! | ACGTGAGATAGCTTGTCAGA+GGG | - | chr4.3:7324479-7324498 | None:intergenic | 45.0% |
| ! | AGTGAGGGGCATGAAGATTA+TGG | + | chr4.3:7324131-7324150 | MS.gene000408:CDS | 45.0% |
| ! | CATCATCGGAAGCATGAAGA+AGG | - | chr4.3:7322380-7322399 | None:intergenic | 45.0% |
| ! | CCTTGGTAGTTGGTGCATAT+TGG | + | chr4.3:7323979-7323998 | MS.gene000408:intron | 45.0% |
| ! | CTTTTTGCCCTTGCAGAAGA+AGG | + | chr4.3:7325395-7325414 | MS.gene000408:intron | 45.0% |
| ! | GTGAGGGGCATGAAGATTAT+GGG | + | chr4.3:7324132-7324151 | MS.gene000408:CDS | 45.0% |
| ! | TAAGGGTATATGGAAGCCTC+AGG | + | chr4.3:7324973-7324992 | MS.gene000408:CDS | 45.0% |
| ! | TCAGGATCTGGGATTGTCTT+GGG | - | chr4.3:7324614-7324633 | None:intergenic | 45.0% |
| ! | TCAGGGTTTGGAATATCCTG+AGG | - | chr4.3:7324992-7325011 | None:intergenic | 45.0% |
| ! | TCGTTAGTTCCCTTGGTAGT+TGG | + | chr4.3:7323969-7323988 | MS.gene000408:intron | 45.0% |
| ! | TTCAGGATCTGGGATTGTCT+TGG | - | chr4.3:7324615-7324634 | None:intergenic | 45.0% |
| ! | TTTGAGACTCGCCTTCAGAA+TGG | + | chr4.3:7324245-7324264 | MS.gene000408:CDS | 45.0% |
| !! | CTGGAAGCATTCAAAGAGTG+AGG | + | chr4.3:7324115-7324134 | MS.gene000408:CDS | 45.0% |
| !! | GGAAGCATTCAAAGAGTGAG+GGG | + | chr4.3:7324117-7324136 | MS.gene000408:CDS | 45.0% |
| !!! | CTTCTGGTTTTGTAGCCTCT+GGG | - | chr4.3:7324796-7324815 | None:intergenic | 45.0% |
| !!! | TCTTCTGGTTTTGTAGCCTC+TGG | - | chr4.3:7324797-7324816 | None:intergenic | 45.0% |
| !!! | TGCCATTTTCCCTTGTATGC+TGG | - | chr4.3:7324926-7324945 | None:intergenic | 45.0% |
| AAACATCGAAGGCTCCACGT+CGG | + | chr4.3:7325872-7325891 | MS.gene000408:CDS | 50.0% | |
| AAAGCCTGATGACTGGGATG+AGG | + | chr4.3:7324691-7324710 | MS.gene000408:CDS | 50.0% | |
| AAGCTTGTAGGCACTCAGGA+AGG | - | chr4.3:7325454-7325473 | None:intergenic | 50.0% | |
| AGCTTGTAGGCACTCAGGAA+GGG | - | chr4.3:7325453-7325472 | None:intergenic | 50.0% | |
| AGCTTGTCAGAGGGAACAGA+TGG | - | chr4.3:7324470-7324489 | None:intergenic | 50.0% | |
| AGCTTTGCATGGCCTTCTCT+AGG | + | chr4.3:7323933-7323952 | MS.gene000408:intron | 50.0% | |
| AGGCTTTACTGCACTTGGGT+CGG | - | chr4.3:7324678-7324697 | None:intergenic | 50.0% | |
| CACATTCGAGGCCATTCTGA+AGG | - | chr4.3:7324259-7324278 | None:intergenic | 50.0% | |
| CAGATGGGGGAAACTTGAGA+TGG | - | chr4.3:7324454-7324473 | None:intergenic | 50.0% | |
| CAGGGGCTGCTTCACAATTT+GGG | - | chr4.3:7324868-7324887 | None:intergenic | 50.0% | |
| CCTGCACAAGAGACATGATC+CGG | - | chr4.3:7325768-7325787 | None:intergenic | 50.0% | |
| CTCTCCACTGTCTTGGTTAG+TGG | - | chr4.3:7325830-7325849 | None:intergenic | 50.0% | |
| CTGGTTGTGGTGAGTGGAAA+CGG | + | chr4.3:7324885-7324904 | MS.gene000408:CDS | 50.0% | |
| CTTCAGAATGGCCTCGAATG+TGG | + | chr4.3:7324257-7324276 | MS.gene000408:CDS | 50.0% | |
| CTTGTCAGAGGGAACAGATG+GGG | - | chr4.3:7324468-7324487 | None:intergenic | 50.0% | |
| GATATGCACCACCACATTCG+AGG | - | chr4.3:7324271-7324290 | None:intergenic | 50.0% | |
| GATTGGGACGATGAAGAGGA+TGG | + | chr4.3:7324815-7324834 | MS.gene000408:CDS | 50.0% | |
| GCTTGTCAGAGGGAACAGAT+GGG | - | chr4.3:7324469-7324488 | None:intergenic | 50.0% | |
| GGATTGTCTTGGGAGGGATA+AGG | - | chr4.3:7324604-7324623 | None:intergenic | 50.0% | |
| GTGCAGTAAAGCCTGATGAC+TGG | + | chr4.3:7324684-7324703 | MS.gene000408:CDS | 50.0% | |
| GTTAGTGGAAGTTTCTGCGG+CGG | - | chr4.3:7325815-7325834 | None:intergenic | 50.0% | |
| GTTTCCACTCACCACAACCA+GGG | - | chr4.3:7324886-7324905 | None:intergenic | 50.0% | |
| GTTTGGTCCTGACAAGTGTG+GGG | + | chr4.3:7324364-7324383 | MS.gene000408:CDS | 50.0% | |
| TAAGATTGCCGCGTCATACC+GGG | + | chr4.3:7325123-7325142 | MS.gene000408:CDS | 50.0% | |
| TCTGGGTCATCTATCTCCTC+AGG | - | chr4.3:7324779-7324798 | None:intergenic | 50.0% | |
| TGAGGAGATAGATGACCCAG+AGG | + | chr4.3:7324778-7324797 | MS.gene000408:CDS | 50.0% | |
| TTAGTGGAAGTTTCTGCGGC+GGG | - | chr4.3:7325814-7325833 | None:intergenic | 50.0% | |
| TTGTCAGAGGGAACAGATGG+GGG | - | chr4.3:7324467-7324486 | None:intergenic | 50.0% | |
| TTTCCACTCACCACAACCAG+GGG | - | chr4.3:7324885-7324904 | None:intergenic | 50.0% | |
| ! | CACGTGAGATAGCTTGTCAG+AGG | - | chr4.3:7324480-7324499 | None:intergenic | 50.0% |
| ! | GATCTGGGATTGTCTTGGGA+GGG | - | chr4.3:7324610-7324629 | None:intergenic | 50.0% |
| ACGCAGCCGAATCTCACAGT+TGG | + | chr4.3:7325610-7325629 | MS.gene000408:CDS | 55.0% | |
| CAAGTGTGGGGCCACAAACA+AGG | + | chr4.3:7324376-7324395 | MS.gene000408:CDS | 55.0% | |
| CAGAATGGCCTCGAATGTGG+TGG | + | chr4.3:7324260-7324279 | MS.gene000408:CDS | 55.0% | |
| CCAAATTGTGAAGCAGCCCC+TGG | + | chr4.3:7324866-7324885 | MS.gene000408:CDS | 55.0% | |
| CCAGGGGCTGCTTCACAATT+TGG | - | chr4.3:7324869-7324888 | None:intergenic | 55.0% | |
| CCGGATCATGTCTCTTGTGC+AGG | + | chr4.3:7325765-7325784 | MS.gene000408:intron | 55.0% | |
| CGTCATACCGGGAGACTACA+TGG | + | chr4.3:7325134-7325153 | MS.gene000408:CDS | 55.0% | |
| CGTTTCCACTCACCACAACC+AGG | - | chr4.3:7324887-7324906 | None:intergenic | 55.0% | |
| GCATCCTCATCCCAGTCATC+AGG | - | chr4.3:7324698-7324717 | None:intergenic | 55.0% | |
| GGCTTTACTGCACTTGGGTC+GGG | - | chr4.3:7324677-7324696 | None:intergenic | 55.0% | |
| GTCTCTTGTGCAGGCAAGAG+TGG | + | chr4.3:7325774-7325793 | MS.gene000408:intron | 55.0% | |
| GTCTTGGGAGGGATAAGGGA+AGG | - | chr4.3:7324599-7324618 | None:intergenic | 55.0% | |
| TACCGCGTCATCGGCATCAT+CGG | - | chr4.3:7322394-7322413 | None:intergenic | 55.0% | |
| TATCTTCGACCACAGGAGGC+TGG | + | chr4.3:7324296-7324315 | MS.gene000408:CDS | 55.0% | |
| TGGGCTTCCATGTAGTCTCC+CGG | - | chr4.3:7325144-7325163 | None:intergenic | 55.0% | |
| TGTAGTCTCCCGGTATGACG+CGG | - | chr4.3:7325134-7325153 | None:intergenic | 55.0% | |
| TTCCGATGATGCCGATGACG+CGG | + | chr4.3:7322389-7322408 | MS.gene000408:CDS | 55.0% | |
| TTTGTGGCCCCACACTTGTC+AGG | - | chr4.3:7324374-7324393 | None:intergenic | 55.0% | |
| ! | GGATCTGGGATTGTCTTGGG+AGG | - | chr4.3:7324611-7324630 | None:intergenic | 55.0% |
| ATCGAAGGCTCCACGTCGGA+GGG | + | chr4.3:7325876-7325895 | MS.gene000408:CDS | 60.0% | |
| CTGGGATGAGGATGCACCCT+TGG | + | chr4.3:7324703-7324722 | MS.gene000408:CDS | 60.0% | |
| GGTTTCCAACCAGCCTCCTG+TGG | - | chr4.3:7324308-7324327 | None:intergenic | 60.0% | |
| TCTCGCTTTACCCTCCGACG+TGG | - | chr4.3:7325889-7325908 | None:intergenic | 60.0% | |
| TCTCTCTCGTCCCAGTCCTC+AGG | - | chr4.3:7324647-7324666 | None:intergenic | 60.0% | |
| TGTGAAGCAGCCCCTGGTTG+TGG | + | chr4.3:7324872-7324891 | MS.gene000408:CDS | 60.0% | |
| TTCGACCACAGGAGGCTGGT+TGG | + | chr4.3:7324300-7324319 | MS.gene000408:CDS | 60.0% | |
| ! | GGAGGCTGGTTGGAAACCCA+AGG | + | chr4.3:7324310-7324329 | MS.gene000408:CDS | 60.0% |
| CAGCCCCTGGTTGTGGTGAG+TGG | + | chr4.3:7324879-7324898 | MS.gene000408:CDS | 65.0% | |
| CATCGAAGGCTCCACGTCGG+AGG | + | chr4.3:7325875-7325894 | MS.gene000408:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 7322303 | 7325915 | 7322303 | ID=MS.gene000408 |
| chr4.3 | mRNA | 7322303 | 7325915 | 7322303 | ID=MS.gene000408.t1;Parent=MS.gene000408 |
| chr4.3 | exon | 7322303 | 7322410 | 7322303 | ID=MS.gene000408.t1.exon1;Parent=MS.gene000408.t1 |
| chr4.3 | CDS | 7322303 | 7322410 | 7322303 | ID=cds.MS.gene000408.t1;Parent=MS.gene000408.t1 |
| chr4.3 | exon | 7322525 | 7322594 | 7322525 | ID=MS.gene000408.t1.exon2;Parent=MS.gene000408.t1 |
| chr4.3 | CDS | 7322525 | 7322594 | 7322525 | ID=cds.MS.gene000408.t1;Parent=MS.gene000408.t1 |
| chr4.3 | exon | 7324111 | 7325237 | 7324111 | ID=MS.gene000408.t1.exon3;Parent=MS.gene000408.t1 |
| chr4.3 | CDS | 7324111 | 7325237 | 7324111 | ID=cds.MS.gene000408.t1;Parent=MS.gene000408.t1 |
| chr4.3 | exon | 7325411 | 7325482 | 7325411 | ID=MS.gene000408.t1.exon4;Parent=MS.gene000408.t1 |
| chr4.3 | CDS | 7325411 | 7325482 | 7325411 | ID=cds.MS.gene000408.t1;Parent=MS.gene000408.t1 |
| chr4.3 | exon | 7325589 | 7325705 | 7325589 | ID=MS.gene000408.t1.exon5;Parent=MS.gene000408.t1 |
| chr4.3 | CDS | 7325589 | 7325705 | 7325589 | ID=cds.MS.gene000408.t1;Parent=MS.gene000408.t1 |
| chr4.3 | exon | 7325787 | 7325915 | 7325787 | ID=MS.gene000408.t1.exon6;Parent=MS.gene000408.t1 |
| chr4.3 | CDS | 7325787 | 7325915 | 7325787 | ID=cds.MS.gene000408.t1;Parent=MS.gene000408.t1 |
| Gene Sequence |
| Protein sequence |
