Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000432.t1 | XP_003630450.1 | 98.7 | 540 | 7 | 0 | 3 | 542 | 1 | 540 | 1.20E-210 | 742.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000432.t1 | Q39817 | 86.1 | 481 | 64 | 2 | 3 | 480 | 1 | 481 | 1.0e-160 | 568.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000432.t1 | G7LGJ8 | 98.7 | 540 | 7 | 0 | 3 | 542 | 1 | 540 | 9.0e-211 | 742.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene82400 | MS.gene000432 | PPI |
| MS.gene56457 | MS.gene000432 | PPI |
| MS.gene001347 | MS.gene000432 | PPI |
| MS.gene006869 | MS.gene000432 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000432.t1 | MTR_8g095680 | 98.148 | 540 | 10 | 0 | 3 | 542 | 1 | 540 | 0.0 | 1078 |
| MS.gene000432.t1 | MTR_3g098430 | 78.938 | 546 | 104 | 6 | 3 | 542 | 1 | 541 | 0.0 | 802 |
| MS.gene000432.t1 | MTR_3g098430 | 78.182 | 550 | 106 | 6 | 3 | 542 | 1 | 546 | 0.0 | 798 |
| MS.gene000432.t1 | MTR_1g083960 | 40.526 | 380 | 167 | 13 | 38 | 410 | 26 | 353 | 2.74e-60 | 205 |
| MS.gene000432.t1 | MTR_4g068080 | 34.165 | 401 | 182 | 15 | 17 | 402 | 12 | 345 | 4.98e-59 | 202 |
| MS.gene000432.t1 | MTR_7g080370 | 33.090 | 411 | 199 | 13 | 3 | 402 | 1 | 346 | 9.78e-59 | 201 |
| MS.gene000432.t1 | MTR_7g080370 | 33.090 | 411 | 199 | 13 | 3 | 402 | 1 | 346 | 2.34e-58 | 200 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000432.t1 | AT5G61790 | 73.635 | 531 | 133 | 3 | 13 | 542 | 6 | 530 | 0.0 | 788 |
| MS.gene000432.t1 | AT5G07340 | 74.067 | 509 | 122 | 5 | 36 | 540 | 27 | 529 | 0.0 | 747 |
| MS.gene000432.t1 | AT5G07340 | 74.308 | 506 | 120 | 5 | 39 | 540 | 38 | 537 | 0.0 | 745 |
| MS.gene000432.t1 | AT1G09210 | 38.686 | 411 | 183 | 12 | 7 | 410 | 3 | 351 | 2.60e-61 | 208 |
| MS.gene000432.t1 | AT1G56340 | 39.173 | 411 | 177 | 14 | 7 | 410 | 7 | 351 | 2.83e-61 | 208 |
| MS.gene000432.t1 | AT1G56340 | 39.173 | 411 | 177 | 14 | 7 | 410 | 7 | 351 | 5.43e-61 | 207 |
| MS.gene000432.t1 | AT1G08450 | 34.588 | 425 | 213 | 15 | 14 | 430 | 10 | 377 | 1.32e-58 | 201 |
| MS.gene000432.t1 | AT1G08450 | 31.294 | 425 | 202 | 16 | 14 | 430 | 10 | 352 | 1.37e-43 | 160 |
| MS.gene000432.t1 | AT1G08450 | 36.207 | 232 | 106 | 6 | 199 | 430 | 134 | 323 | 2.36e-27 | 114 |
Find 154 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGGGCTGCTTCACAATT+TGG | 0.117242 | 4.3:-7363654 | None:intergenic |
| AATTGAAAATCCAGCTTATA+AGG | 0.199133 | 4.3:+7363743 | MS.gene000432:CDS |
| CAATTTGGGTTAGTAATCTT+AGG | 0.221903 | 4.3:-7363639 | None:intergenic |
| GGTTTCTTATCTTCAGGATC+TGG | 0.250300 | 4.3:-7363411 | None:intergenic |
| GTTTCATCGACAGGGGAATA+TGG | 0.254330 | 4.3:+7361072 | None:intergenic |
| CTCTTTCTCAATAGTAAACT+TGG | 0.257204 | 4.3:-7363949 | None:intergenic |
| AGTGAGGGGCATGAAGATTA+TGG | 0.263277 | 4.3:+7362919 | MS.gene000432:CDS |
| ACCGTTATATTCATTCTTAT+CGG | 0.278275 | 4.3:-7361362 | None:intergenic |
| TCCTCAGGTTTCTTATCTTC+AGG | 0.293756 | 4.3:-7363417 | None:intergenic |
| CAGCTATCGGTATTGAGATT+TGG | 0.301537 | 4.3:+7363838 | MS.gene000432:CDS |
| TCTTCATCGTCCCAATCTTC+TGG | 0.309076 | 4.3:-7363597 | None:intergenic |
| TATGCTGGATTCTTCTTCAT+TGG | 0.315161 | 4.3:-7363696 | None:intergenic |
| TCTCCCTATTCTATCATGTT+TGG | 0.320919 | 4.3:+7363135 | MS.gene000432:CDS |
| ATCCAGCTTATAAGGGTATA+TGG | 0.323335 | 4.3:+7363751 | MS.gene000432:CDS |
| ATCCAGCATACAAGGGAAAA+TGG | 0.325180 | 4.3:+7363709 | MS.gene000432:CDS |
| CTCTCCACTGTCTTGGTTAG+TGG | 0.328971 | 4.3:-7364614 | None:intergenic |
| TTCTGTGCATTCTAGGCATC+TGG | 0.336994 | 4.3:+7362884 | MS.gene000432:intron |
| CAGGGGCTGCTTCACAATTT+GGG | 0.337351 | 4.3:-7363653 | None:intergenic |
| AGCTCAAAGTAATCAGGGTT+TGG | 0.338624 | 4.3:-7363789 | None:intergenic |
| TCAGGATCTGGGATTGTCTT+GGG | 0.366663 | 4.3:-7363399 | None:intergenic |
| GAAACAGAAGGAAGAAGAAA+AGG | 0.367207 | 4.3:+7363971 | MS.gene000432:CDS |
| CTTCATTCTCTCCACTGTCT+TGG | 0.379721 | 4.3:-7364621 | None:intergenic |
| AGCTGCAATAGGCTCAAAAT+CGG | 0.385593 | 4.3:-7363820 | None:intergenic |
| TGACGGGGAACAGAAGAAAA+AGG | 0.390374 | 4.3:+7363332 | MS.gene000432:CDS |
| AGAATCATTGTCGAATTCCT+TGG | 0.403305 | 4.3:-7363115 | None:intergenic |
| TTTGTGGCCCCACACTTGTC+AGG | 0.403994 | 4.3:-7363159 | None:intergenic |
| AATTTGGGTTAGTAATCTTA+GGG | 0.406892 | 4.3:-7363638 | None:intergenic |
| TCATCAGGCTTTACTGCACT+TGG | 0.408900 | 4.3:-7363468 | None:intergenic |
| CAAAATTTGCAACTCATTGT+CGG | 0.409058 | 4.3:-7363307 | None:intergenic |
| TTCAGGATCTGGGATTGTCT+TGG | 0.412629 | 4.3:-7363400 | None:intergenic |
| AAAATTTGCAACTCATTGTC+GGG | 0.414444 | 4.3:-7363306 | None:intergenic |
| GTTTCTTATCTTCAGGATCT+GGG | 0.420391 | 4.3:-7363410 | None:intergenic |
| GGCTTTACTGCACTTGGGTC+GGG | 0.421849 | 4.3:-7363462 | None:intergenic |
| TCATCATCTAACCATCCTTC+AGG | 0.423626 | 4.3:-7363540 | None:intergenic |
| GATTGTCTTGGGAGGGATAA+GGG | 0.435368 | 4.3:-7363388 | None:intergenic |
| TGATGAGCCTGTGATTCTTA+AGG | 0.438519 | 4.3:+7362990 | MS.gene000432:CDS |
| GAATCATTGTCGAATTCCTT+GGG | 0.440765 | 4.3:-7363114 | None:intergenic |
| TCTCTCTCGTCCCAGTCCTC+AGG | 0.441848 | 4.3:-7363432 | None:intergenic |
| AGGACCAAACATGATAGAAT+AGG | 0.444316 | 4.3:-7363139 | None:intergenic |
| CGATGAAGAGGATGGTGAAT+GGG | 0.445046 | 4.3:+7363611 | MS.gene000432:CDS |
| TTTGCAGGATCTCATTGAAA+AGG | 0.448014 | 4.3:+7364369 | MS.gene000432:intron |
| GTGAGGGGCATGAAGATTAT+GGG | 0.448284 | 4.3:+7362920 | MS.gene000432:CDS |
| GCATCCTCATCCCAGTCATC+AGG | 0.452608 | 4.3:-7363483 | None:intergenic |
| TACCGCGTCATCGGCATCAT+CGG | 0.454767 | 4.3:-7361179 | None:intergenic |
| TTCCTTCGTATCGTATTTGG+TGG | 0.456544 | 4.3:+7364457 | MS.gene000432:CDS |
| GGCTACAAAACCAGAAGATT+GGG | 0.458059 | 4.3:+7363587 | MS.gene000432:CDS |
| AGGCTACAAAACCAGAAGAT+TGG | 0.458247 | 4.3:+7363586 | MS.gene000432:CDS |
| ATTGAAAATCCAGCTTATAA+GGG | 0.458787 | 4.3:+7363744 | MS.gene000432:CDS |
| TCAATACCGATAGCTGCAAT+AGG | 0.462507 | 4.3:-7363831 | None:intergenic |
| GTGCAGTAAAGCCTGATGAC+TGG | 0.469031 | 4.3:+7363472 | MS.gene000432:CDS |
| ACGATGAAGAGGATGGTGAA+TGG | 0.471046 | 4.3:+7363610 | MS.gene000432:CDS |
| GAAGAAGAATCCAGCATACA+AGG | 0.471522 | 4.3:+7363701 | MS.gene000432:CDS |
| TTTCATCGACAGGGGAATAT+GGG | 0.471974 | 4.3:+7361073 | None:intergenic |
| GGCAAATTTCTTATCTTCTG+AGG | 0.473999 | 4.3:+7363353 | MS.gene000432:CDS |
| GTCTCTTGTGCAGGCAAGAG+TGG | 0.475290 | 4.3:+7364561 | MS.gene000432:intron |
| GGATTGTCTTGGGAGGGATA+AGG | 0.478867 | 4.3:-7363389 | None:intergenic |
| TCAACATACTCCCCACTCTT+CGG | 0.479318 | 4.3:-7363213 | None:intergenic |
| ATAAGATTGCCGCGTCATAC+CGG | 0.480655 | 4.3:+7363910 | MS.gene000432:CDS |
| CTGGTTGTGGTGAGTGGAAA+CGG | 0.483867 | 4.3:+7363673 | MS.gene000432:CDS |
| AGCTTGTCAGAGGGAACAGA+TGG | 0.491925 | 4.3:-7363255 | None:intergenic |
| CGTCATACCGGGAGACTACA+TGG | 0.492103 | 4.3:+7363922 | MS.gene000432:CDS |
| AATGAAGTGCACCTTGTTTG+TGG | 0.492594 | 4.3:-7363175 | None:intergenic |
| TCTGGGTCATCTATCTCCTC+AGG | 0.498032 | 4.3:-7363564 | None:intergenic |
| CTGGGATGAGGATGCACCCT+TGG | 0.500943 | 4.3:+7363491 | MS.gene000432:CDS |
| TTCCATATACCCTTATAAGC+TGG | 0.501975 | 4.3:-7363753 | None:intergenic |
| TTGCAGGATCTCATTGAAAA+GGG | 0.502190 | 4.3:+7364370 | MS.gene000432:intron |
| AGAATTCCAACTGTGAGATT+CGG | 0.503519 | 4.3:-7364403 | None:intergenic |
| AAGATGAATTACCGCGTCAT+CGG | 0.505451 | 4.3:-7361188 | None:intergenic |
| TTCTTCATCAAGAATTTCCA+AGG | 0.505747 | 4.3:-7363508 | None:intergenic |
| CGTTTCCACTCACCACAACC+AGG | 0.506800 | 4.3:-7363672 | None:intergenic |
| TAAGATTGCCGCGTCATACC+GGG | 0.509139 | 4.3:+7363911 | MS.gene000432:CDS |
| CATCATCGGAAGCATGAAGA+AGG | 0.517297 | 4.3:-7361165 | None:intergenic |
| AGGCTTTACTGCACTTGGGT+CGG | 0.517691 | 4.3:-7363463 | None:intergenic |
| AAGATAAGAAACCTGAGGAC+TGG | 0.518095 | 4.3:+7363421 | MS.gene000432:CDS |
| TTTGAGCCTATTGCAGCTAT+CGG | 0.519883 | 4.3:+7363825 | MS.gene000432:CDS |
| TCTTTCTCAATAGTAAACTT+GGG | 0.520577 | 4.3:-7363948 | None:intergenic |
| GGACCAAACATGATAGAATA+GGG | 0.520952 | 4.3:-7363138 | None:intergenic |
| GATATGCACCACCACATTCG+AGG | 0.524176 | 4.3:-7363056 | None:intergenic |
| AAGCTTGTAGGCACTCAGGA+AGG | 0.524251 | 4.3:-7364237 | None:intergenic |
| TAAGGGTATATGGAAGCCTC+AGG | 0.527187 | 4.3:+7363761 | MS.gene000432:CDS |
| TATTGAGATTTGGACAATGC+AGG | 0.530334 | 4.3:+7363848 | MS.gene000432:CDS |
| TGTGAAGCAGCCCCTGGTTG+TGG | 0.538010 | 4.3:+7363660 | MS.gene000432:CDS |
| TTAGTGGAAGTTTCTGCGGC+GGG | 0.539110 | 4.3:-7364598 | None:intergenic |
| TCCGATAAGAATGAATATAA+CGG | 0.541713 | 4.3:+7361361 | MS.gene000432:CDS |
| TTTGAGACTCGCCTTCAGAA+TGG | 0.542633 | 4.3:+7363033 | MS.gene000432:CDS |
| TGTTTGGTCCTGACAAGTGT+GGG | 0.544403 | 4.3:+7363151 | MS.gene000432:CDS |
| GATTGGGACGATGAAGAGGA+TGG | 0.545919 | 4.3:+7363603 | MS.gene000432:CDS |
| GATTCATCCTTAAGAATCAC+AGG | 0.546646 | 4.3:-7362997 | None:intergenic |
| GAATGAAGAAAACAAAGAGG+AGG | 0.550444 | 4.3:+7364636 | MS.gene000432:CDS |
| CCAAATTGTGAAGCAGCCCC+TGG | 0.552013 | 4.3:+7363654 | MS.gene000432:CDS |
| CTTCTACGAATCATTTGATG+AGG | 0.552271 | 4.3:+7361315 | MS.gene000432:CDS |
| GCTGCAATAGGCTCAAAATC+GGG | 0.552533 | 4.3:-7363819 | None:intergenic |
| GAACGAAAGCGAATTCCTCT+CGG | 0.553910 | 4.3:+7361097 | MS.gene000432:CDS |
| CAGCCCCTGGTTGTGGTGAG+TGG | 0.555593 | 4.3:+7363667 | MS.gene000432:CDS |
| TATCTTCGACCACAGGAGGC+TGG | 0.558917 | 4.3:+7363084 | MS.gene000432:CDS |
| TGGAATTCTTGTAGCCGTTG+TGG | 0.561141 | 4.3:+7364417 | MS.gene000432:CDS |
| TTCGACCACAGGAGGCTGGT+TGG | 0.565629 | 4.3:+7363088 | MS.gene000432:CDS |
| CACATTCGAGGCCATTCTGA+AGG | 0.570634 | 4.3:-7363044 | None:intergenic |
| TGCAGTAAAGCCTGATGACT+GGG | 0.572111 | 4.3:+7363473 | MS.gene000432:CDS |
| CAAGTGTGGGGCCACAAACA+AGG | 0.573921 | 4.3:+7363164 | MS.gene000432:CDS |
| ATCGAAGGCTCCACGTCGGA+GGG | 0.574361 | 4.3:+7364663 | MS.gene000432:CDS |
| GGATCTGGGATTGTCTTGGG+AGG | 0.575634 | 4.3:-7363396 | None:intergenic |
| TCCTTCGTATCGTATTTGGT+GGG | 0.575662 | 4.3:+7364458 | MS.gene000432:CDS |
| TGGGCTTCCATGTAGTCTCC+CGG | 0.577142 | 4.3:-7363929 | None:intergenic |
| GGTTTCCAACCAGCCTCCTG+TGG | 0.577641 | 4.3:-7363093 | None:intergenic |
| AGAGAATGAAGAAAACAAAG+AGG | 0.578426 | 4.3:+7364633 | MS.gene000432:CDS |
| AGATAAGAAACCTGAGGACT+GGG | 0.579804 | 4.3:+7363422 | MS.gene000432:CDS |
| ACGCAGCCGAATCTCACAGT+TGG | 0.579809 | 4.3:+7364397 | MS.gene000432:CDS |
| CTTCAGAATGGCCTCGAATG+TGG | 0.579974 | 4.3:+7363045 | MS.gene000432:CDS |
| AGCTTGTAGGCACTCAGGAA+GGG | 0.580489 | 4.3:-7364236 | None:intergenic |
| ATGTTTGGTCCTGACAAGTG+TGG | 0.588377 | 4.3:+7363150 | MS.gene000432:CDS |
| GCTTGTCAGAGGGAACAGAT+GGG | 0.589147 | 4.3:-7363254 | None:intergenic |
| AGAAGATTGGGACGATGAAG+AGG | 0.591248 | 4.3:+7363599 | MS.gene000432:CDS |
| CTGGAAGCATTCAAAGAGTG+AGG | 0.591782 | 4.3:+7362903 | MS.gene000432:CDS |
| TTGGTTAGTGGAAGTTTCTG+CGG | 0.593316 | 4.3:-7364602 | None:intergenic |
| CATCGAAGGCTCCACGTCGG+AGG | 0.595933 | 4.3:+7364662 | MS.gene000432:CDS |
| TCTAAAATATCTTCGACCAC+AGG | 0.596292 | 4.3:+7363077 | MS.gene000432:CDS |
| CATCAGGCTTTACTGCACTT+GGG | 0.599406 | 4.3:-7363467 | None:intergenic |
| TGGAAGCATTCAAAGAGTGA+GGG | 0.600050 | 4.3:+7362904 | MS.gene000432:CDS |
| GTTAGTGGAAGTTTCTGCGG+CGG | 0.603337 | 4.3:-7364599 | None:intergenic |
| CTTGTCAGAGGGAACAGATG+GGG | 0.612571 | 4.3:-7363253 | None:intergenic |
| AAGCTGTGAAACCTGAAGGA+TGG | 0.618409 | 4.3:+7363529 | MS.gene000432:CDS |
| GTCTTGGGAGGGATAAGGGA+AGG | 0.622855 | 4.3:-7363384 | None:intergenic |
| CACGTGAGATAGCTTGTCAG+AGG | 0.622862 | 4.3:-7363265 | None:intergenic |
| AAAATATCTTCGACCACAGG+AGG | 0.623259 | 4.3:+7363080 | MS.gene000432:CDS |
| TATTGAGAAAGAGAAACAGA+AGG | 0.623870 | 4.3:+7363959 | MS.gene000432:CDS |
| TTGTCAGAGGGAACAGATGG+GGG | 0.626548 | 4.3:-7363252 | None:intergenic |
| TTTCCACTCACCACAACCAG+GGG | 0.634593 | 4.3:-7363670 | None:intergenic |
| TCTTCATCAAGAATTTCCAA+GGG | 0.634894 | 4.3:-7363507 | None:intergenic |
| GTTTCCACTCACCACAACCA+GGG | 0.635541 | 4.3:-7363671 | None:intergenic |
| CAAAGAGGAGGAAACATCGA+AGG | 0.636270 | 4.3:+7364648 | MS.gene000432:CDS |
| ATTTGGGTTAGTAATCTTAG+GGG | 0.637193 | 4.3:-7363637 | None:intergenic |
| TCAGGGTTTGGAATATCCTG+AGG | 0.637275 | 4.3:-7363777 | None:intergenic |
| GAAAAGGACACTGAATCAAG+TGG | 0.639039 | 4.3:+7363987 | MS.gene000432:CDS |
| GAGATTTGGACAATGCAGGA+TGG | 0.641655 | 4.3:+7363852 | MS.gene000432:CDS |
| AAAGCCTGATGACTGGGATG+AGG | 0.642158 | 4.3:+7363479 | MS.gene000432:CDS |
| TTCCGATGATGCCGATGACG+CGG | 0.642498 | 4.3:+7361177 | MS.gene000432:CDS |
| TCCCACCAAATACGATACGA+AGG | 0.645566 | 4.3:-7364459 | None:intergenic |
| GGAGGCTGGTTGGAAACCCA+AGG | 0.645830 | 4.3:+7363098 | MS.gene000432:CDS |
| AAGAAGAATCCAGCATACAA+GGG | 0.648479 | 4.3:+7363702 | MS.gene000432:CDS |
| GGAAGCATTCAAAGAGTGAG+GGG | 0.655093 | 4.3:+7362905 | MS.gene000432:CDS |
| TCCTGAAGATAAGAAACCTG+AGG | 0.657027 | 4.3:+7363416 | MS.gene000432:CDS |
| ATGGTTAGATGATGAGCCTG+AGG | 0.657489 | 4.3:+7363548 | MS.gene000432:CDS |
| CAGAATGGCCTCGAATGTGG+TGG | 0.657663 | 4.3:+7363048 | MS.gene000432:CDS |
| GATCTGGGATTGTCTTGGGA+GGG | 0.659461 | 4.3:-7363395 | None:intergenic |
| TCTCGCTTTACCCTCCGACG+TGG | 0.660404 | 4.3:-7364673 | None:intergenic |
| TGTAGTCTCCCGGTATGACG+CGG | 0.661561 | 4.3:-7363919 | None:intergenic |
| GAAGAAGCTGTGAAACCTGA+AGG | 0.662222 | 4.3:+7363525 | MS.gene000432:CDS |
| GTTTGGTCCTGACAAGTGTG+GGG | 0.685526 | 4.3:+7363152 | MS.gene000432:CDS |
| TGAGGAGATAGATGACCCAG+AGG | 0.689200 | 4.3:+7363566 | MS.gene000432:CDS |
| ACGTGAGATAGCTTGTCAGA+GGG | 0.689496 | 4.3:-7363264 | None:intergenic |
| ACTTCCACTAACCAAGACAG+TGG | 0.694252 | 4.3:+7364610 | MS.gene000432:CDS |
| TGTCAAGACAATAACCACAA+CGG | 0.738680 | 4.3:-7364431 | None:intergenic |
| AAACATCGAAGGCTCCACGT+CGG | 0.757199 | 4.3:+7364659 | MS.gene000432:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTTATAGAATATAATAT+TGG | + | chr4.3:7362453-7362472 | MS.gene000432:intron | 10.0% |
| !! | ATTTATAAAAAAAAACATAC+AGG | + | chr4.3:7361993-7362012 | MS.gene000432:intron | 10.0% |
| !!! | ATTGATTTTGTTAATTTTTT+TGG | + | chr4.3:7361505-7361524 | MS.gene000432:intron | 10.0% |
| !!! | ATTTTTATTTACAAAAAGAT+TGG | + | chr4.3:7361768-7361787 | MS.gene000432:intron | 10.0% |
| !!! | GTATGTTTTTTTTTATAAAT+AGG | - | chr4.3:7361993-7362012 | None:intergenic | 10.0% |
| !! | AATAATAAATATTGTCATCA+AGG | - | chr4.3:7361797-7361816 | None:intergenic | 15.0% |
| !! | TTTCAAAAAAAAATTCTTGT+AGG | + | chr4.3:7361573-7361592 | MS.gene000432:intron | 15.0% |
| !! | TTTCATTAATTGTGAATTAA+TGG | + | chr4.3:7361429-7361448 | MS.gene000432:intron | 15.0% |
| !!! | ACTATTTTTGACAAAAAAAT+TGG | - | chr4.3:7362030-7362049 | None:intergenic | 15.0% |
| !!! | TTTTGAAATAGATTTGAAAT+TGG | - | chr4.3:7361561-7361580 | None:intergenic | 15.0% |
| !! | ATATTCTATAACTATTTCAG+AGG | - | chr4.3:7362448-7362467 | None:intergenic | 20.0% |
| !! | ATGATTATGAAAATAAGAGT+CGG | + | chr4.3:7362539-7362558 | MS.gene000432:intron | 20.0% |
| !! | TAGAATATAATATTGGAAAG+TGG | + | chr4.3:7362460-7362479 | MS.gene000432:intron | 20.0% |
| !! | TATTCTATAACTATTTCAGA+GGG | - | chr4.3:7362447-7362466 | None:intergenic | 20.0% |
| !! | TTTAACAGTATATGTATTTG+TGG | + | chr4.3:7362493-7362512 | MS.gene000432:intron | 20.0% |
| !!! | TTCAACTTTAATTTTTCAAG+TGG | + | chr4.3:7362226-7362245 | MS.gene000432:intron | 20.0% |
| ! | AAGTAAAATCATGCATAAGA+AGG | - | chr4.3:7364164-7364183 | None:intergenic | 25.0% |
| ! | AATTGAAAATCCAGCTTATA+AGG | + | chr4.3:7363743-7363762 | MS.gene000432:CDS | 25.0% |
| ! | ACCGTTATATTCATTCTTAT+CGG | - | chr4.3:7361365-7361384 | None:intergenic | 25.0% |
| ! | ATTGAAAATCCAGCTTATAA+GGG | + | chr4.3:7363744-7363763 | MS.gene000432:CDS | 25.0% |
| ! | ATTTCCTATATGTTAATCAC+CGG | + | chr4.3:7364533-7364552 | MS.gene000432:intron | 25.0% |
| ! | CCTTTCTTAGAAAATATGAT+TGG | - | chr4.3:7362590-7362609 | None:intergenic | 25.0% |
| ! | TAGTATAAGCCATTGATAAA+GGG | - | chr4.3:7362144-7362163 | None:intergenic | 25.0% |
| ! | TCCGATAAGAATGAATATAA+CGG | + | chr4.3:7361361-7361380 | MS.gene000432:CDS | 25.0% |
| ! | TCTTTCTCAATAGTAAACTT+GGG | - | chr4.3:7363951-7363970 | None:intergenic | 25.0% |
| ! | TTAGTATAAGCCATTGATAA+AGG | - | chr4.3:7362145-7362164 | None:intergenic | 25.0% |
| ! | TTGTTAGCATATCTTAAACA+AGG | + | chr4.3:7362256-7362275 | MS.gene000432:intron | 25.0% |
| !! | AAAAAATTCTTGTAGGTTGA+AGG | + | chr4.3:7361580-7361599 | MS.gene000432:intron | 25.0% |
| !! | AAATGATAACAGAGTTGTTT+TGG | - | chr4.3:7364517-7364536 | None:intergenic | 25.0% |
| !! | ATAAGCTGGATTTTCAATTA+GGG | - | chr4.3:7363742-7363761 | None:intergenic | 25.0% |
| !! | GTTTGTTTGATGATTGAATT+TGG | + | chr4.3:7361229-7361248 | MS.gene000432:intron | 25.0% |
| !! | TATAAGCTGGATTTTCAATT+AGG | - | chr4.3:7363743-7363762 | None:intergenic | 25.0% |
| !! | TTGTTTAAGATATGCTAACA+AGG | - | chr4.3:7362257-7362276 | None:intergenic | 25.0% |
| !! | TTTTAAGCTCAAAGTAATCA+GGG | - | chr4.3:7363797-7363816 | None:intergenic | 25.0% |
| !! | TTTTTATGAGGCTTAAATTG+AGG | + | chr4.3:7361262-7361281 | MS.gene000432:intron | 25.0% |
| !!! | AAACAAACAAGAGTATTTGT+TGG | + | chr4.3:7361647-7361666 | MS.gene000432:intron | 25.0% |
| !!! | AAAGCTAAATTTTAAGGACA+AGG | - | chr4.3:7362707-7362726 | None:intergenic | 25.0% |
| !!! | AATTTGGGTTAGTAATCTTA+GGG | - | chr4.3:7363641-7363660 | None:intergenic | 25.0% |
| !!! | CATCTTCTCTCTTTTTTTTT+TGG | + | chr4.3:7361205-7361224 | MS.gene000432:intron | 25.0% |
| !!! | CCAATCATATTTTCTAAGAA+AGG | + | chr4.3:7362587-7362606 | MS.gene000432:intron | 25.0% |
| !!! | CTTTAATTTTTCAAGTGGTA+CGG | + | chr4.3:7362231-7362250 | MS.gene000432:intron | 25.0% |
| !!! | TACATGTATTTTAAGCTTGT+AGG | - | chr4.3:7364252-7364271 | None:intergenic | 25.0% |
| !!! | TCTAATTTGTTAAACACGAA+AGG | - | chr4.3:7361827-7361846 | None:intergenic | 25.0% |
| !!! | TTTTTAAGCTCAAAGTAATC+AGG | - | chr4.3:7363798-7363817 | None:intergenic | 25.0% |
| AAAATTTGCAACTCATTGTC+GGG | - | chr4.3:7363309-7363328 | None:intergenic | 30.0% | |
| AAATGCTAATGTGTTTCCTT+AGG | + | chr4.3:7361935-7361954 | MS.gene000432:intron | 30.0% | |
| AAATGGTAAAAAGCAACATG+TGG | - | chr4.3:7362082-7362101 | None:intergenic | 30.0% | |
| AACATTCCTCTCTACTTATA+AGG | - | chr4.3:7361866-7361885 | None:intergenic | 30.0% | |
| AACTATGGCCTAAAAGTAAT+TGG | + | chr4.3:7361910-7361929 | MS.gene000432:intron | 30.0% | |
| AATGCTAATGTGTTTCCTTA+GGG | + | chr4.3:7361936-7361955 | MS.gene000432:intron | 30.0% | |
| ACTCTTGAAAAGTAGTATAG+TGG | + | chr4.3:7361731-7361750 | MS.gene000432:intron | 30.0% | |
| AGAGAATGAAGAAAACAAAG+AGG | + | chr4.3:7364633-7364652 | MS.gene000432:CDS | 30.0% | |
| AGATGTAATGTTTCACTTTG+TGG | + | chr4.3:7364322-7364341 | MS.gene000432:intron | 30.0% | |
| ATCAAGTCACTATAACTGAA+GGG | - | chr4.3:7362822-7362841 | None:intergenic | 30.0% | |
| CAAAATTTGCAACTCATTGT+CGG | - | chr4.3:7363310-7363329 | None:intergenic | 30.0% | |
| CTCTACTTATAAGGATGTAA+GGG | - | chr4.3:7361857-7361876 | None:intergenic | 30.0% | |
| CTCTTTCTCAATAGTAAACT+TGG | - | chr4.3:7363952-7363971 | None:intergenic | 30.0% | |
| TAAAATCATGCATAAGAAGG+AGG | - | chr4.3:7364161-7364180 | None:intergenic | 30.0% | |
| TATCAAGTCACTATAACTGA+AGG | - | chr4.3:7362823-7362842 | None:intergenic | 30.0% | |
| TATTGAGAAAGAGAAACAGA+AGG | + | chr4.3:7363959-7363978 | MS.gene000432:CDS | 30.0% | |
| TCTCTACTTATAAGGATGTA+AGG | - | chr4.3:7361858-7361877 | None:intergenic | 30.0% | |
| TCTTCATCAAGAATTTCCAA+GGG | - | chr4.3:7363510-7363529 | None:intergenic | 30.0% | |
| TGTGTAGATTCACAAATTTC+TGG | + | chr4.3:7362616-7362635 | MS.gene000432:intron | 30.0% | |
| TTACATCCTTATAAGTAGAG+AGG | + | chr4.3:7361857-7361876 | MS.gene000432:intron | 30.0% | |
| TTCTTCATCAAGAATTTCCA+AGG | - | chr4.3:7363511-7363530 | None:intergenic | 30.0% | |
| TTGTGAATTAATGGAACATG+CGG | + | chr4.3:7361438-7361457 | MS.gene000432:intron | 30.0% | |
| TTTACCATTTGCTTGTGTAA+GGG | + | chr4.3:7362092-7362111 | MS.gene000432:intron | 30.0% | |
| ! | CCATGCAAAGCTAAATTTTA+AGG | - | chr4.3:7362713-7362732 | None:intergenic | 30.0% |
| ! | TAAGCTGGATTTTCAATTAG+GGG | - | chr4.3:7363741-7363760 | None:intergenic | 30.0% |
| ! | TTTTACCATTTGCTTGTGTA+AGG | + | chr4.3:7362091-7362110 | MS.gene000432:intron | 30.0% |
| !! | ATTTGGGTTAGTAATCTTAG+GGG | - | chr4.3:7363640-7363659 | None:intergenic | 30.0% |
| !! | CAATTTGGGTTAGTAATCTT+AGG | - | chr4.3:7363642-7363661 | None:intergenic | 30.0% |
| !! | CCTTAAAATTTAGCTTTGCA+TGG | + | chr4.3:7362710-7362729 | MS.gene000432:intron | 30.0% |
| !! | GCATTTCACCAATTACTTTT+AGG | - | chr4.3:7361921-7361940 | None:intergenic | 30.0% |
| !!! | ACAAATTTCTGGTACTTTTG+TGG | + | chr4.3:7362627-7362646 | MS.gene000432:intron | 30.0% |
| !!! | AGTTGCAAATTTTGATTGAC+GGG | + | chr4.3:7363316-7363335 | MS.gene000432:CDS | 30.0% |
| !!! | GAGTTGCAAATTTTGATTGA+CGG | + | chr4.3:7363315-7363334 | MS.gene000432:CDS | 30.0% |
| !!! | GGATCTATGTTGTTTTTATG+AGG | + | chr4.3:7361250-7361269 | MS.gene000432:intron | 30.0% |
| AAAACCCTTACACAAGCAAA+TGG | - | chr4.3:7362099-7362118 | None:intergenic | 35.0% | |
| AAGAAGAATCCAGCATACAA+GGG | + | chr4.3:7363702-7363721 | MS.gene000432:CDS | 35.0% | |
| AAGACCAGACAAAAAACAGT+AGG | - | chr4.3:7364120-7364139 | None:intergenic | 35.0% | |
| AAGCATAAAAATCCGAAGAG+TGG | + | chr4.3:7363201-7363220 | MS.gene000432:CDS | 35.0% | |
| AATGCTAACAACTGCTTTCA+TGG | + | chr4.3:7362281-7362300 | MS.gene000432:intron | 35.0% | |
| ACTGTTTCCTTAGATTTGCA+TGG | + | chr4.3:7362678-7362697 | MS.gene000432:intron | 35.0% | |
| AGAATCATTGTCGAATTCCT+TGG | - | chr4.3:7363118-7363137 | None:intergenic | 35.0% | |
| AGAATTCCAACTGTGAGATT+CGG | - | chr4.3:7364406-7364425 | None:intergenic | 35.0% | |
| AGCATAAAAATCCGAAGAGT+GGG | + | chr4.3:7363202-7363221 | MS.gene000432:CDS | 35.0% | |
| AGCATACATGTAATGTCATC+TGG | + | chr4.3:7364017-7364036 | MS.gene000432:intron | 35.0% | |
| AGGACCAAACATGATAGAAT+AGG | - | chr4.3:7363142-7363161 | None:intergenic | 35.0% | |
| ATCAAATACCTTCTTCTGCA+AGG | - | chr4.3:7364192-7364211 | None:intergenic | 35.0% | |
| CAAAAACATGAACCTAGAGA+AGG | - | chr4.3:7362736-7362755 | None:intergenic | 35.0% | |
| CTTCTACGAATCATTTGATG+AGG | + | chr4.3:7361315-7361334 | MS.gene000432:CDS | 35.0% | |
| GAAACAGAAGGAAGAAGAAA+AGG | + | chr4.3:7363971-7363990 | MS.gene000432:CDS | 35.0% | |
| GAATCATTGTCGAATTCCTT+GGG | - | chr4.3:7363117-7363136 | None:intergenic | 35.0% | |
| GAATGAAGAAAACAAAGAGG+AGG | + | chr4.3:7364636-7364655 | MS.gene000432:CDS | 35.0% | |
| GATTCATCCTTAAGAATCAC+AGG | - | chr4.3:7363000-7363019 | None:intergenic | 35.0% | |
| GGACCAAACATGATAGAATA+GGG | - | chr4.3:7363141-7363160 | None:intergenic | 35.0% | |
| GGCAAATTTCTTATCTTCTG+AGG | + | chr4.3:7363353-7363372 | MS.gene000432:CDS | 35.0% | |
| GTTTCTTATCTTCAGGATCT+GGG | - | chr4.3:7363413-7363432 | None:intergenic | 35.0% | |
| TATGCTGGATTCTTCTTCAT+TGG | - | chr4.3:7363699-7363718 | None:intergenic | 35.0% | |
| TATTGAGATTTGGACAATGC+AGG | + | chr4.3:7363848-7363867 | MS.gene000432:CDS | 35.0% | |
| TCAAATACCTTCTTCTGCAA+GGG | - | chr4.3:7364191-7364210 | None:intergenic | 35.0% | |
| TCTCCCTATTCTATCATGTT+TGG | + | chr4.3:7363135-7363154 | MS.gene000432:CDS | 35.0% | |
| TGATCCGGTGATTAACATAT+AGG | - | chr4.3:7364540-7364559 | None:intergenic | 35.0% | |
| TGTCAAGACAATAACCACAA+CGG | - | chr4.3:7364434-7364453 | None:intergenic | 35.0% | |
| TTAACACGTCCCTTTATCAA+TGG | + | chr4.3:7362132-7362151 | MS.gene000432:intron | 35.0% | |
| TTCCATATACCCTTATAAGC+TGG | - | chr4.3:7363756-7363775 | None:intergenic | 35.0% | |
| TTGCAGGATCTCATTGAAAA+GGG | + | chr4.3:7364370-7364389 | MS.gene000432:intron | 35.0% | |
| TTGTTAAACACGAAAGGAGT+CGG | - | chr4.3:7361821-7361840 | None:intergenic | 35.0% | |
| TTTGCAGGATCTCATTGAAA+AGG | + | chr4.3:7364369-7364388 | MS.gene000432:intron | 35.0% | |
| ! | AAGCTGGATTTTCAATTAGG+GGG | - | chr4.3:7363740-7363759 | None:intergenic | 35.0% |
| ! | AAGGTATCCATGCAAATCTA+AGG | - | chr4.3:7362688-7362707 | None:intergenic | 35.0% |
| ! | ATCCAGCTTATAAGGGTATA+TGG | + | chr4.3:7363751-7363770 | MS.gene000432:CDS | 35.0% |
| ! | CTCAACTCACTTTCTTCTTT+TGG | + | chr4.3:7361400-7361419 | MS.gene000432:intron | 35.0% |
| ! | GTATTTGTTGGACACATGAT+TGG | + | chr4.3:7361659-7361678 | MS.gene000432:intron | 35.0% |
| ! | GTTTTCCTTCGTATCGTATT+TGG | + | chr4.3:7364454-7364473 | MS.gene000432:CDS | 35.0% |
| ! | TCTAAAATATCTTCGACCAC+AGG | + | chr4.3:7363077-7363096 | MS.gene000432:CDS | 35.0% |
| !! | ATGAGGATTTTGATGATCGT+TGG | + | chr4.3:7361332-7361351 | MS.gene000432:CDS | 35.0% |
| !! | TGAATTCTGTGTTGATTTGC+AGG | + | chr4.3:7364354-7364373 | MS.gene000432:intron | 35.0% |
| !! | TGATTTGTTCTGTGCATTCT+AGG | + | chr4.3:7362877-7362896 | MS.gene000432:intron | 35.0% |
| !! | TTTCTGGTACTTTTGTGGAA+TGG | + | chr4.3:7362632-7362651 | MS.gene000432:intron | 35.0% |
| !!! | GTTGCAAATTTTGATTGACG+GGG | + | chr4.3:7363317-7363336 | MS.gene000432:CDS | 35.0% |
| AAAAGCAAATCTTCCTGCTG+TGG | + | chr4.3:7364283-7364302 | MS.gene000432:intron | 40.0% | |
| AAAATATCTTCGACCACAGG+AGG | + | chr4.3:7363080-7363099 | MS.gene000432:CDS | 40.0% | |
| AAGATAAGAAACCTGAGGAC+TGG | + | chr4.3:7363421-7363440 | MS.gene000432:CDS | 40.0% | |
| AAGATGAATTACCGCGTCAT+CGG | - | chr4.3:7361191-7361210 | None:intergenic | 40.0% | |
| AATGTGTTTCCTTAGGGAGT+TGG | + | chr4.3:7361942-7361961 | MS.gene000432:intron | 40.0% | |
| ACTATAACTGAAGGGAGATG+TGG | - | chr4.3:7362814-7362833 | None:intergenic | 40.0% | |
| AGATAAGAAACCTGAGGACT+GGG | + | chr4.3:7363422-7363441 | MS.gene000432:CDS | 40.0% | |
| AGCTCAAAGTAATCAGGGTT+TGG | - | chr4.3:7363792-7363811 | None:intergenic | 40.0% | |
| AGCTGCAATAGGCTCAAAAT+CGG | - | chr4.3:7363823-7363842 | None:intergenic | 40.0% | |
| AGGCTACAAAACCAGAAGAT+TGG | + | chr4.3:7363586-7363605 | MS.gene000432:CDS | 40.0% | |
| AGGGTAAAGCGAGATAATTG+AGG | + | chr4.3:7364682-7364701 | MS.gene000432:CDS | 40.0% | |
| ATCCAGCATACAAGGGAAAA+TGG | + | chr4.3:7363709-7363728 | MS.gene000432:CDS | 40.0% | |
| ATTCCTTAACCAACTCCCTA+AGG | - | chr4.3:7361954-7361973 | None:intergenic | 40.0% | |
| CAATATGCACCAACTACCAA+GGG | - | chr4.3:7362769-7362788 | None:intergenic | 40.0% | |
| GAAAAGGACACTGAATCAAG+TGG | + | chr4.3:7363987-7364006 | MS.gene000432:CDS | 40.0% | |
| GAAGAAGAATCCAGCATACA+AGG | + | chr4.3:7363701-7363720 | MS.gene000432:CDS | 40.0% | |
| GAATGTTCAGACTTTAGGTG+AGG | + | chr4.3:7361879-7361898 | MS.gene000432:intron | 40.0% | |
| GAGAGGAATGTTCAGACTTT+AGG | + | chr4.3:7361874-7361893 | MS.gene000432:intron | 40.0% | |
| GCATAAAAATCCGAAGAGTG+GGG | + | chr4.3:7363203-7363222 | MS.gene000432:CDS | 40.0% | |
| GGCTACAAAACCAGAAGATT+GGG | + | chr4.3:7363587-7363606 | MS.gene000432:CDS | 40.0% | |
| GGGTAAAGCGAGATAATTGA+GGG | + | chr4.3:7364683-7364702 | MS.gene000432:CDS | 40.0% | |
| GGTGAGGTGAATGTAAACTA+TGG | + | chr4.3:7361895-7361914 | MS.gene000432:intron | 40.0% | |
| GGTTTCTTATCTTCAGGATC+TGG | - | chr4.3:7363414-7363433 | None:intergenic | 40.0% | |
| TACAGGGAGTTTCTACTTAC+TGG | - | chr4.3:7364493-7364512 | None:intergenic | 40.0% | |
| TCAATACCGATAGCTGCAAT+AGG | - | chr4.3:7363834-7363853 | None:intergenic | 40.0% | |
| TCATCATCTAACCATCCTTC+AGG | - | chr4.3:7363543-7363562 | None:intergenic | 40.0% | |
| TCCTCAGGTTTCTTATCTTC+AGG | - | chr4.3:7363420-7363439 | None:intergenic | 40.0% | |
| TCCTGAAGATAAGAAACCTG+AGG | + | chr4.3:7363416-7363435 | MS.gene000432:CDS | 40.0% | |
| TCCTTCGTATCGTATTTGGT+GGG | + | chr4.3:7364458-7364477 | MS.gene000432:CDS | 40.0% | |
| TGATGAGCCTGTGATTCTTA+AGG | + | chr4.3:7362990-7363009 | MS.gene000432:CDS | 40.0% | |
| TGTTAAACACGAAAGGAGTC+GGG | - | chr4.3:7361820-7361839 | None:intergenic | 40.0% | |
| TTCCTTCGTATCGTATTTGG+TGG | + | chr4.3:7364457-7364476 | MS.gene000432:CDS | 40.0% | |
| TTGGTTAGTGGAAGTTTCTG+CGG | - | chr4.3:7364605-7364624 | None:intergenic | 40.0% | |
| TTTGAGCCTATTGCAGCTAT+CGG | + | chr4.3:7363825-7363844 | MS.gene000432:CDS | 40.0% | |
| ! | AATGAAGTGCACCTTGTTTG+TGG | - | chr4.3:7363178-7363197 | None:intergenic | 40.0% |
| ! | AGCTGGATTTTCAATTAGGG+GGG | - | chr4.3:7363739-7363758 | None:intergenic | 40.0% |
| ! | CAGCTATCGGTATTGAGATT+TGG | + | chr4.3:7363838-7363857 | MS.gene000432:CDS | 40.0% |
| ! | TTTCCTTAGGGAGTTGGTTA+AGG | + | chr4.3:7361948-7361967 | MS.gene000432:intron | 40.0% |
| ! | TTTTAAGCTTGTAGGCACTC+AGG | - | chr4.3:7364244-7364263 | None:intergenic | 40.0% |
| ! | TTTTTGCTCGTTAGTTCCCT+TGG | + | chr4.3:7362750-7362769 | MS.gene000432:intron | 40.0% |
| !! | TGGAAGCATTCAAAGAGTGA+GGG | + | chr4.3:7362904-7362923 | MS.gene000432:CDS | 40.0% |
| !!! | AACAGAGTTGTTTTGGCTAC+AGG | - | chr4.3:7364510-7364529 | None:intergenic | 40.0% |
| !!! | ACAGAGTTGTTTTGGCTACA+GGG | - | chr4.3:7364509-7364528 | None:intergenic | 40.0% |
| !!! | CTCTCCTACTGTTTTTTGTC+TGG | + | chr4.3:7364113-7364132 | MS.gene000432:intron | 40.0% |
| AACAACTGCTTTCATGGCAC+TGG | + | chr4.3:7362287-7362306 | MS.gene000432:intron | 45.0% | |
| AAGCTGTGAAACCTGAAGGA+TGG | + | chr4.3:7363529-7363548 | MS.gene000432:CDS | 45.0% | |
| ACGATGAAGAGGATGGTGAA+TGG | + | chr4.3:7363610-7363629 | MS.gene000432:CDS | 45.0% | |
| ACTTCCACTAACCAAGACAG+TGG | + | chr4.3:7364610-7364629 | MS.gene000432:CDS | 45.0% | |
| AGAAGATTGGGACGATGAAG+AGG | + | chr4.3:7363599-7363618 | MS.gene000432:CDS | 45.0% | |
| AGCACTGCAAAAATTCCGAG+AGG | - | chr4.3:7361115-7361134 | None:intergenic | 45.0% | |
| AGTGAATCAAATGCCACAGC+AGG | - | chr4.3:7364299-7364318 | None:intergenic | 45.0% | |
| ATAAGATTGCCGCGTCATAC+CGG | + | chr4.3:7363910-7363929 | MS.gene000432:CDS | 45.0% | |
| ATGGTTAGATGATGAGCCTG+AGG | + | chr4.3:7363548-7363567 | MS.gene000432:CDS | 45.0% | |
| ATGTTTGGTCCTGACAAGTG+TGG | + | chr4.3:7363150-7363169 | MS.gene000432:CDS | 45.0% | |
| CAAAGAGGAGGAAACATCGA+AGG | + | chr4.3:7364648-7364667 | MS.gene000432:CDS | 45.0% | |
| CATCAGGCTTTACTGCACTT+GGG | - | chr4.3:7363470-7363489 | None:intergenic | 45.0% | |
| CCAATATGCACCAACTACCA+AGG | - | chr4.3:7362770-7362789 | None:intergenic | 45.0% | |
| CGATGAAGAGGATGGTGAAT+GGG | + | chr4.3:7363611-7363630 | MS.gene000432:CDS | 45.0% | |
| CTTCATTCTCTCCACTGTCT+TGG | - | chr4.3:7364624-7364643 | None:intergenic | 45.0% | |
| GAACGAAAGCGAATTCCTCT+CGG | + | chr4.3:7361097-7361116 | MS.gene000432:CDS | 45.0% | |
| GAAGAAGCTGTGAAACCTGA+AGG | + | chr4.3:7363525-7363544 | MS.gene000432:CDS | 45.0% | |
| GAGATTTGGACAATGCAGGA+TGG | + | chr4.3:7363852-7363871 | MS.gene000432:CDS | 45.0% | |
| GATTGTCTTGGGAGGGATAA+GGG | - | chr4.3:7363391-7363410 | None:intergenic | 45.0% | |
| GCTGCAATAGGCTCAAAATC+GGG | - | chr4.3:7363822-7363841 | None:intergenic | 45.0% | |
| TCAACATACTCCCCACTCTT+CGG | - | chr4.3:7363216-7363235 | None:intergenic | 45.0% | |
| TCATCAGGCTTTACTGCACT+TGG | - | chr4.3:7363471-7363490 | None:intergenic | 45.0% | |
| TCCCACCAAATACGATACGA+AGG | - | chr4.3:7364462-7364481 | None:intergenic | 45.0% | |
| TCTTCATCGTCCCAATCTTC+TGG | - | chr4.3:7363600-7363619 | None:intergenic | 45.0% | |
| TGACGGGGAACAGAAGAAAA+AGG | + | chr4.3:7363332-7363351 | MS.gene000432:CDS | 45.0% | |
| TGCAGTAAAGCCTGATGACT+GGG | + | chr4.3:7363473-7363492 | MS.gene000432:CDS | 45.0% | |
| TGGAATTCTTGTAGCCGTTG+TGG | + | chr4.3:7364417-7364436 | MS.gene000432:CDS | 45.0% | |
| TGTTTGGTCCTGACAAGTGT+GGG | + | chr4.3:7363151-7363170 | MS.gene000432:CDS | 45.0% | |
| TTCTGTGCATTCTAGGCATC+TGG | + | chr4.3:7362884-7362903 | MS.gene000432:intron | 45.0% | |
| ! | ACGTGAGATAGCTTGTCAGA+GGG | - | chr4.3:7363267-7363286 | None:intergenic | 45.0% |
| ! | AGTGAGGGGCATGAAGATTA+TGG | + | chr4.3:7362919-7362938 | MS.gene000432:CDS | 45.0% |
| ! | CATCATCGGAAGCATGAAGA+AGG | - | chr4.3:7361168-7361187 | None:intergenic | 45.0% |
| ! | CCTTGGTAGTTGGTGCATAT+TGG | + | chr4.3:7362767-7362786 | MS.gene000432:intron | 45.0% |
| ! | CTTTTTGCCCTTGCAGAAGA+AGG | + | chr4.3:7364181-7364200 | MS.gene000432:intron | 45.0% |
| ! | GTGAGGGGCATGAAGATTAT+GGG | + | chr4.3:7362920-7362939 | MS.gene000432:CDS | 45.0% |
| ! | TAAGGGTATATGGAAGCCTC+AGG | + | chr4.3:7363761-7363780 | MS.gene000432:CDS | 45.0% |
| ! | TCAGGATCTGGGATTGTCTT+GGG | - | chr4.3:7363402-7363421 | None:intergenic | 45.0% |
| ! | TCAGGGTTTGGAATATCCTG+AGG | - | chr4.3:7363780-7363799 | None:intergenic | 45.0% |
| ! | TCGTTAGTTCCCTTGGTAGT+TGG | + | chr4.3:7362757-7362776 | MS.gene000432:intron | 45.0% |
| ! | TTCAGGATCTGGGATTGTCT+TGG | - | chr4.3:7363403-7363422 | None:intergenic | 45.0% |
| ! | TTTGAGACTCGCCTTCAGAA+TGG | + | chr4.3:7363033-7363052 | MS.gene000432:CDS | 45.0% |
| !! | CTGGAAGCATTCAAAGAGTG+AGG | + | chr4.3:7362903-7362922 | MS.gene000432:CDS | 45.0% |
| !! | GGAAGCATTCAAAGAGTGAG+GGG | + | chr4.3:7362905-7362924 | MS.gene000432:CDS | 45.0% |
| !!! | CTTCTGGTTTTGTAGCCTCT+GGG | - | chr4.3:7363584-7363603 | None:intergenic | 45.0% |
| !!! | TCTTCTGGTTTTGTAGCCTC+TGG | - | chr4.3:7363585-7363604 | None:intergenic | 45.0% |
| !!! | TGCCATTTTCCCTTGTATGC+TGG | - | chr4.3:7363714-7363733 | None:intergenic | 45.0% |
| AAACATCGAAGGCTCCACGT+CGG | + | chr4.3:7364659-7364678 | MS.gene000432:CDS | 50.0% | |
| AAAGCCTGATGACTGGGATG+AGG | + | chr4.3:7363479-7363498 | MS.gene000432:CDS | 50.0% | |
| AAGCTTGTAGGCACTCAGGA+AGG | - | chr4.3:7364240-7364259 | None:intergenic | 50.0% | |
| AGCTTGTAGGCACTCAGGAA+GGG | - | chr4.3:7364239-7364258 | None:intergenic | 50.0% | |
| AGCTTGTCAGAGGGAACAGA+TGG | - | chr4.3:7363258-7363277 | None:intergenic | 50.0% | |
| AGCTTTGCATGGCCTTCTCT+AGG | + | chr4.3:7362721-7362740 | MS.gene000432:intron | 50.0% | |
| AGGCTTTACTGCACTTGGGT+CGG | - | chr4.3:7363466-7363485 | None:intergenic | 50.0% | |
| CACATTCGAGGCCATTCTGA+AGG | - | chr4.3:7363047-7363066 | None:intergenic | 50.0% | |
| CAGATGGGGGAAACTTGAGA+TGG | - | chr4.3:7363242-7363261 | None:intergenic | 50.0% | |
| CAGGGGCTGCTTCACAATTT+GGG | - | chr4.3:7363656-7363675 | None:intergenic | 50.0% | |
| CCTGCACAAGAGACATGATC+CGG | - | chr4.3:7364555-7364574 | None:intergenic | 50.0% | |
| CTCTCCACTGTCTTGGTTAG+TGG | - | chr4.3:7364617-7364636 | None:intergenic | 50.0% | |
| CTGGTTGTGGTGAGTGGAAA+CGG | + | chr4.3:7363673-7363692 | MS.gene000432:CDS | 50.0% | |
| CTTCAGAATGGCCTCGAATG+TGG | + | chr4.3:7363045-7363064 | MS.gene000432:CDS | 50.0% | |
| CTTGTCAGAGGGAACAGATG+GGG | - | chr4.3:7363256-7363275 | None:intergenic | 50.0% | |
| GATATGCACCACCACATTCG+AGG | - | chr4.3:7363059-7363078 | None:intergenic | 50.0% | |
| GATTGGGACGATGAAGAGGA+TGG | + | chr4.3:7363603-7363622 | MS.gene000432:CDS | 50.0% | |
| GCTTGTCAGAGGGAACAGAT+GGG | - | chr4.3:7363257-7363276 | None:intergenic | 50.0% | |
| GGATTGTCTTGGGAGGGATA+AGG | - | chr4.3:7363392-7363411 | None:intergenic | 50.0% | |
| GTGCAGTAAAGCCTGATGAC+TGG | + | chr4.3:7363472-7363491 | MS.gene000432:CDS | 50.0% | |
| GTTAGTGGAAGTTTCTGCGG+CGG | - | chr4.3:7364602-7364621 | None:intergenic | 50.0% | |
| GTTTCCACTCACCACAACCA+GGG | - | chr4.3:7363674-7363693 | None:intergenic | 50.0% | |
| GTTTGGTCCTGACAAGTGTG+GGG | + | chr4.3:7363152-7363171 | MS.gene000432:CDS | 50.0% | |
| TAAGATTGCCGCGTCATACC+GGG | + | chr4.3:7363911-7363930 | MS.gene000432:CDS | 50.0% | |
| TCTGGGTCATCTATCTCCTC+AGG | - | chr4.3:7363567-7363586 | None:intergenic | 50.0% | |
| TGAGGAGATAGATGACCCAG+AGG | + | chr4.3:7363566-7363585 | MS.gene000432:CDS | 50.0% | |
| TTAGTGGAAGTTTCTGCGGC+GGG | - | chr4.3:7364601-7364620 | None:intergenic | 50.0% | |
| TTGTCAGAGGGAACAGATGG+GGG | - | chr4.3:7363255-7363274 | None:intergenic | 50.0% | |
| TTTCCACTCACCACAACCAG+GGG | - | chr4.3:7363673-7363692 | None:intergenic | 50.0% | |
| ! | CACGTGAGATAGCTTGTCAG+AGG | - | chr4.3:7363268-7363287 | None:intergenic | 50.0% |
| ! | GATCTGGGATTGTCTTGGGA+GGG | - | chr4.3:7363398-7363417 | None:intergenic | 50.0% |
| ACGCAGCCGAATCTCACAGT+TGG | + | chr4.3:7364397-7364416 | MS.gene000432:CDS | 55.0% | |
| CAAGTGTGGGGCCACAAACA+AGG | + | chr4.3:7363164-7363183 | MS.gene000432:CDS | 55.0% | |
| CAGAATGGCCTCGAATGTGG+TGG | + | chr4.3:7363048-7363067 | MS.gene000432:CDS | 55.0% | |
| CCAAATTGTGAAGCAGCCCC+TGG | + | chr4.3:7363654-7363673 | MS.gene000432:CDS | 55.0% | |
| CCAGGGGCTGCTTCACAATT+TGG | - | chr4.3:7363657-7363676 | None:intergenic | 55.0% | |
| CCGGATCATGTCTCTTGTGC+AGG | + | chr4.3:7364552-7364571 | MS.gene000432:intron | 55.0% | |
| CGTCATACCGGGAGACTACA+TGG | + | chr4.3:7363922-7363941 | MS.gene000432:CDS | 55.0% | |
| CGTTTCCACTCACCACAACC+AGG | - | chr4.3:7363675-7363694 | None:intergenic | 55.0% | |
| GCATCCTCATCCCAGTCATC+AGG | - | chr4.3:7363486-7363505 | None:intergenic | 55.0% | |
| GGCTTTACTGCACTTGGGTC+GGG | - | chr4.3:7363465-7363484 | None:intergenic | 55.0% | |
| GTCTCTTGTGCAGGCAAGAG+TGG | + | chr4.3:7364561-7364580 | MS.gene000432:intron | 55.0% | |
| GTCTTGGGAGGGATAAGGGA+AGG | - | chr4.3:7363387-7363406 | None:intergenic | 55.0% | |
| TACCGCGTCATCGGCATCAT+CGG | - | chr4.3:7361182-7361201 | None:intergenic | 55.0% | |
| TATCTTCGACCACAGGAGGC+TGG | + | chr4.3:7363084-7363103 | MS.gene000432:CDS | 55.0% | |
| TGGGCTTCCATGTAGTCTCC+CGG | - | chr4.3:7363932-7363951 | None:intergenic | 55.0% | |
| TGTAGTCTCCCGGTATGACG+CGG | - | chr4.3:7363922-7363941 | None:intergenic | 55.0% | |
| TTCCGATGATGCCGATGACG+CGG | + | chr4.3:7361177-7361196 | MS.gene000432:CDS | 55.0% | |
| TTTGTGGCCCCACACTTGTC+AGG | - | chr4.3:7363162-7363181 | None:intergenic | 55.0% | |
| ! | GGATCTGGGATTGTCTTGGG+AGG | - | chr4.3:7363399-7363418 | None:intergenic | 55.0% |
| ATCGAAGGCTCCACGTCGGA+GGG | + | chr4.3:7364663-7364682 | MS.gene000432:CDS | 60.0% | |
| CTGGGATGAGGATGCACCCT+TGG | + | chr4.3:7363491-7363510 | MS.gene000432:CDS | 60.0% | |
| GGTTTCCAACCAGCCTCCTG+TGG | - | chr4.3:7363096-7363115 | None:intergenic | 60.0% | |
| TCTCGCTTTACCCTCCGACG+TGG | - | chr4.3:7364676-7364695 | None:intergenic | 60.0% | |
| TCTCTCTCGTCCCAGTCCTC+AGG | - | chr4.3:7363435-7363454 | None:intergenic | 60.0% | |
| TGTGAAGCAGCCCCTGGTTG+TGG | + | chr4.3:7363660-7363679 | MS.gene000432:CDS | 60.0% | |
| TTCGACCACAGGAGGCTGGT+TGG | + | chr4.3:7363088-7363107 | MS.gene000432:CDS | 60.0% | |
| ! | GGAGGCTGGTTGGAAACCCA+AGG | + | chr4.3:7363098-7363117 | MS.gene000432:CDS | 60.0% |
| CAGCCCCTGGTTGTGGTGAG+TGG | + | chr4.3:7363667-7363686 | MS.gene000432:CDS | 65.0% | |
| CATCGAAGGCTCCACGTCGG+AGG | + | chr4.3:7364662-7364681 | MS.gene000432:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 7361085 | 7364702 | 7361085 | ID=MS.gene000432 |
| chr4.3 | mRNA | 7361085 | 7364702 | 7361085 | ID=MS.gene000432.t1;Parent=MS.gene000432 |
| chr4.3 | exon | 7361085 | 7361198 | 7361085 | ID=MS.gene000432.t1.exon1;Parent=MS.gene000432.t1 |
| chr4.3 | CDS | 7361085 | 7361198 | 7361085 | ID=cds.MS.gene000432.t1;Parent=MS.gene000432.t1 |
| chr4.3 | exon | 7361313 | 7361382 | 7361313 | ID=MS.gene000432.t1.exon2;Parent=MS.gene000432.t1 |
| chr4.3 | CDS | 7361313 | 7361382 | 7361313 | ID=cds.MS.gene000432.t1;Parent=MS.gene000432.t1 |
| chr4.3 | exon | 7362899 | 7364025 | 7362899 | ID=MS.gene000432.t1.exon3;Parent=MS.gene000432.t1 |
| chr4.3 | CDS | 7362899 | 7364025 | 7362899 | ID=cds.MS.gene000432.t1;Parent=MS.gene000432.t1 |
| chr4.3 | exon | 7364197 | 7364268 | 7364197 | ID=MS.gene000432.t1.exon4;Parent=MS.gene000432.t1 |
| chr4.3 | CDS | 7364197 | 7364268 | 7364197 | ID=cds.MS.gene000432.t1;Parent=MS.gene000432.t1 |
| chr4.3 | exon | 7364376 | 7364492 | 7364376 | ID=MS.gene000432.t1.exon5;Parent=MS.gene000432.t1 |
| chr4.3 | CDS | 7364376 | 7364492 | 7364376 | ID=cds.MS.gene000432.t1;Parent=MS.gene000432.t1 |
| chr4.3 | exon | 7364574 | 7364702 | 7364574 | ID=MS.gene000432.t1.exon6;Parent=MS.gene000432.t1 |
| chr4.3 | CDS | 7364574 | 7364702 | 7364574 | ID=cds.MS.gene000432.t1;Parent=MS.gene000432.t1 |
| Gene Sequence |
| Protein sequence |
