Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000523.t1 | XP_003630561.2 | 95.9 | 444 | 5 | 2 | 1 | 432 | 1 | 443 | 1.40E-244 | 855.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000523.t1 | Q8RY00 | 77.5 | 440 | 88 | 2 | 1 | 430 | 1 | 439 | 1.1e-202 | 707.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000523.t1 | G7LI40 | 95.9 | 444 | 5 | 2 | 1 | 432 | 1 | 443 | 9.9e-245 | 855.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene000523 | MS.gene024277 | PPI |
| MS.gene000523 | MS.gene065390 | PPI |
| MS.gene000523 | MS.gene033709 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000523.t1 | MTR_8g099840 | 95.946 | 444 | 5 | 2 | 1 | 432 | 1 | 443 | 0.0 | 877 |
| MS.gene000523.t1 | MTR_8g099840 | 94.236 | 347 | 7 | 2 | 1 | 335 | 1 | 346 | 0.0 | 674 |
| MS.gene000523.t1 | MTR_8g099840 | 92.884 | 267 | 6 | 2 | 1 | 255 | 1 | 266 | 1.24e-179 | 504 |
| MS.gene000523.t1 | MTR_7g084010 | 42.459 | 431 | 215 | 9 | 28 | 432 | 50 | 473 | 2.50e-112 | 338 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000523.t1 | AT3G48820 | 78.588 | 425 | 90 | 1 | 6 | 430 | 16 | 439 | 0.0 | 719 |
| MS.gene000523.t1 | AT3G48820 | 82.000 | 400 | 71 | 1 | 31 | 430 | 32 | 430 | 0.0 | 709 |
| MS.gene000523.t1 | AT1G08660 | 43.792 | 443 | 214 | 9 | 13 | 427 | 31 | 466 | 2.04e-120 | 359 |
| MS.gene000523.t1 | AT1G08660 | 50.313 | 320 | 151 | 5 | 13 | 331 | 31 | 343 | 5.65e-111 | 330 |
| MS.gene000523.t1 | AT1G08660 | 52.650 | 283 | 128 | 4 | 50 | 331 | 15 | 292 | 4.24e-106 | 316 |
Find 123 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAAGTATGGTGGTGTTTC+GGG | 0.164848 | 4.3:+6965187 | None:intergenic |
| GAAACCTTACCACACATTTC+TGG | 0.172341 | 4.3:+6966615 | None:intergenic |
| ATCCAAACCGTGTGGTAAAA+TGG | 0.189886 | 4.3:-6963886 | MS.gene000523:CDS |
| AGCTTCAAGTTCACCTGTTT+TGG | 0.204030 | 4.3:+6966304 | None:intergenic |
| TCCTAGCCGCCCTTATAATA+TGG | 0.223170 | 4.3:+6963852 | None:intergenic |
| CCAGTGACACCATTCCTAAA+TGG | 0.231814 | 4.3:-6966448 | MS.gene000523:CDS |
| TTAGGAATATTTACCCATTT+AGG | 0.252210 | 4.3:+6966434 | None:intergenic |
| TTTAGCTTGCTTCTTAACTA+TGG | 0.260463 | 4.3:+6963145 | None:intergenic |
| AGGGAAGTATGGTGGTGTTT+CGG | 0.267578 | 4.3:+6965186 | None:intergenic |
| CTGTGCTGTTATTGGTAATT+CGG | 0.288884 | 4.3:-6965149 | MS.gene000523:CDS |
| TTCAGTACGGTTCAATCATT+TGG | 0.313850 | 4.3:+6962995 | None:intergenic |
| GGTTCAGCTGCAAAAGGAAC+TGG | 0.314598 | 4.3:-6964560 | MS.gene000523:CDS |
| TTCATCAGTGAGGTGATAAC+TGG | 0.315515 | 4.3:+6966673 | None:intergenic |
| GATCTCTTGAAAACAAGATT+TGG | 0.317148 | 4.3:-6965124 | MS.gene000523:CDS |
| TTGTTGCTTGCTTTAGCATC+TGG | 0.335089 | 4.3:-6966830 | MS.gene000523:CDS |
| CCATACTTCCCTAGACAGTA+TGG | 0.349266 | 4.3:-6965175 | MS.gene000523:CDS |
| TTCATTGATTCTTTACCAAA+TGG | 0.360418 | 4.3:-6965960 | MS.gene000523:CDS |
| TATGGGCGCTGTGCTGTTAT+TGG | 0.363705 | 4.3:-6965157 | MS.gene000523:CDS |
| GATAAAGTTGTTGAATTAGA+TGG | 0.365529 | 4.3:-6964887 | MS.gene000523:intron |
| AGATATACAGGGTTTCTTAT+AGG | 0.378205 | 4.3:+6964602 | None:intergenic |
| CTCATGCTAGGTGCTTCCTT+TGG | 0.384537 | 4.3:-6964581 | MS.gene000523:CDS |
| CCATACTGTCTAGGGAAGTA+TGG | 0.392953 | 4.3:+6965175 | None:intergenic |
| GCAAAGAAAAGAAGTCTTGA+TGG | 0.399442 | 4.3:-6964776 | MS.gene000523:CDS |
| TGTGCTGTTATTGGTAATTC+GGG | 0.400694 | 4.3:-6965148 | MS.gene000523:CDS |
| CCTAGCCGCCCTTATAATAT+GGG | 0.402773 | 4.3:+6963853 | None:intergenic |
| AACAACTTTATCCAGGGCTT+TGG | 0.405394 | 4.3:+6964898 | None:intergenic |
| TGCAAAAGGAACTGGGCTTA+AGG | 0.413825 | 4.3:-6964552 | MS.gene000523:CDS |
| TTCAATGAGGATTCTTCGAT+TGG | 0.415527 | 4.3:-6966855 | None:intergenic |
| GCACCTAGCATGAGATATAC+AGG | 0.415674 | 4.3:+6964590 | None:intergenic |
| TCCTTTGGTTCAGCTGCAAA+AGG | 0.423855 | 4.3:-6964566 | MS.gene000523:CDS |
| CTAATTCAACAACTTTATCC+AGG | 0.426379 | 4.3:+6964891 | None:intergenic |
| AGATTTGGAAAGGAGATAGA+TGG | 0.435574 | 4.3:-6965109 | MS.gene000523:CDS |
| GCAGAAACCGCTGCGAGAAC+AGG | 0.438906 | 4.3:-6965243 | MS.gene000523:intron |
| TATGATCAAGTGCTGCCTTT+CGG | 0.440437 | 4.3:+6963096 | None:intergenic |
| TCATTGATTCTTTACCAAAT+GGG | 0.440664 | 4.3:-6965959 | MS.gene000523:CDS |
| AGTGCAAAGCAACCCATGTC+CGG | 0.442191 | 4.3:+6963028 | None:intergenic |
| GATGTGGTCTTAAGAGAAAA+TGG | 0.446580 | 4.3:-6965082 | MS.gene000523:CDS |
| GCATACTCCTCCCACCCATT+TGG | 0.447815 | 4.3:+6965945 | None:intergenic |
| CAGTGACACCATTCCTAAAT+GGG | 0.448835 | 4.3:-6966447 | MS.gene000523:intron |
| CCATTTAGGAATGGTGTCAC+TGG | 0.455695 | 4.3:+6966448 | None:intergenic |
| CTCCCAAGCACTCCATCATC+TGG | 0.457469 | 4.3:+6964296 | None:intergenic |
| TTTGTTCATGATGTCATGAA+TGG | 0.459272 | 4.3:+6964744 | None:intergenic |
| GATCAGCTCTCATGGGAGAA+TGG | 0.461970 | 4.3:+6963906 | None:intergenic |
| TAATACCATTCTTTATAGCC+AGG | 0.463008 | 4.3:+6964470 | None:intergenic |
| TCCAAACCGTGTGGTAAAAT+GGG | 0.465398 | 4.3:-6963885 | MS.gene000523:CDS |
| TATGGCTTCACTGTGGATCC+TGG | 0.466550 | 4.3:-6964488 | MS.gene000523:CDS |
| AGCTGTGGCCACATGGGAAC+AGG | 0.467280 | 4.3:-6966255 | MS.gene000523:intron |
| GCTTGGCGTAGGATCAATAA+AGG | 0.468052 | 4.3:-6965924 | MS.gene000523:CDS |
| CGGTTCAATCATTTGGCACT+TGG | 0.469763 | 4.3:+6963002 | None:intergenic |
| TAAAGAATCAATGAATTCCT+TGG | 0.471491 | 4.3:+6965968 | None:intergenic |
| TTACCAGATGATGGAGTGCT+TGG | 0.472129 | 4.3:-6964299 | MS.gene000523:CDS |
| CTCTACCATGCAACGGCGTA+TGG | 0.475443 | 4.3:+6964326 | None:intergenic |
| ACGGTTTGGATCAGCTCTCA+TGG | 0.476271 | 4.3:+6963898 | None:intergenic |
| TGACAGAAAGATCCCAAAAC+AGG | 0.477217 | 4.3:-6966317 | MS.gene000523:intron |
| GTGCAGAGTGCAAATGGACT+TGG | 0.495862 | 4.3:-6966524 | MS.gene000523:intron |
| TCGAGGATCTGCCAAAGCCC+TGG | 0.500630 | 4.3:-6964909 | MS.gene000523:CDS |
| TCAATGAGGATTCTTCGATT+GGG | 0.506002 | 4.3:-6966854 | MS.gene000523:CDS |
| GCACAGCGCCCATACTGTCT+AGG | 0.514239 | 4.3:+6965166 | None:intergenic |
| CTGGAGCATAGTCCCGGACA+TGG | 0.519320 | 4.3:-6963041 | MS.gene000523:CDS |
| CATCATGAACAAAATGATCA+AGG | 0.519724 | 4.3:-6964734 | MS.gene000523:intron |
| TACCAGATGATGGAGTGCTT+GGG | 0.521083 | 4.3:-6964298 | MS.gene000523:CDS |
| GTTCAGCTGCAAAAGGAACT+GGG | 0.526330 | 4.3:-6964559 | MS.gene000523:CDS |
| TATCCTCTGGAGCATAGTCC+CGG | 0.531152 | 4.3:-6963047 | MS.gene000523:CDS |
| TGGATCCTGGCTATAAAGAA+TGG | 0.531996 | 4.3:-6964475 | MS.gene000523:intron |
| AATATTTACCCATTTAGGAA+TGG | 0.532039 | 4.3:+6966439 | None:intergenic |
| CTTGAAAACAAGATTTGGAA+AGG | 0.532426 | 4.3:-6965119 | MS.gene000523:CDS |
| AAGCACAACCATGTATCCTC+TGG | 0.536009 | 4.3:-6963060 | MS.gene000523:CDS |
| ACTATGCTCCAGAGGATACA+TGG | 0.536033 | 4.3:+6963052 | None:intergenic |
| AGGCAGCACTTGATCATATG+AGG | 0.537428 | 4.3:-6963091 | MS.gene000523:CDS |
| TAATTCAACAACTTTATCCA+GGG | 0.541642 | 4.3:+6964892 | None:intergenic |
| TAGAGCTTATTACCAGATGA+TGG | 0.544103 | 4.3:-6964308 | MS.gene000523:CDS |
| GTGCAAAGCAACCCATGTCC+GGG | 0.552522 | 4.3:+6963029 | None:intergenic |
| TTGATTCTTTACCAAATGGG+TGG | 0.556317 | 4.3:-6965956 | MS.gene000523:CDS |
| TGTGATTCAGTGGATATGTA+TGG | 0.556586 | 4.3:-6964506 | MS.gene000523:CDS |
| TGATTCTTTACCAAATGGGT+GGG | 0.557082 | 4.3:-6965955 | MS.gene000523:CDS |
| TGTGGTTTGACAGTAATCAC+TGG | 0.563628 | 4.3:+6966481 | None:intergenic |
| ACTATACTGAATACGTGGGT+AGG | 0.565449 | 4.3:-6964955 | MS.gene000523:CDS |
| CGAGAACAGGACCTTGTGCA+TGG | 0.566447 | 4.3:-6965230 | MS.gene000523:CDS |
| CACAGCGCCCATACTGTCTA+GGG | 0.566529 | 4.3:+6965167 | None:intergenic |
| CAAGGCCATACGCCGTTGCA+TGG | 0.568742 | 4.3:-6964331 | MS.gene000523:CDS |
| AGAAAATGGTGCTCCAACAC+AGG | 0.573691 | 4.3:-6965068 | MS.gene000523:intron |
| GAATTCCTTGGTGAGTATAG+TGG | 0.574734 | 4.3:+6965980 | None:intergenic |
| TTCTTTACCAAATGGGTGGG+AGG | 0.576101 | 4.3:-6965952 | MS.gene000523:CDS |
| CGGTTTGGATCAGCTCTCAT+GGG | 0.579412 | 4.3:+6963899 | None:intergenic |
| ATGGGTGGGAGGAGTATGCT+TGG | 0.582024 | 4.3:-6965941 | MS.gene000523:CDS |
| CATTTAGGAATGGTGTCACT+GGG | 0.582041 | 4.3:+6966449 | None:intergenic |
| ACTATGGAACATGCACGCAA+TGG | 0.586223 | 4.3:+6963161 | None:intergenic |
| CTAGCCGCCCTTATAATATG+GGG | 0.587250 | 4.3:+6963854 | None:intergenic |
| GGGAGGAGTATGCTTGGCGT+AGG | 0.591457 | 4.3:-6965935 | MS.gene000523:CDS |
| CACTGAATCACACATGGAGA+GGG | 0.594319 | 4.3:+6964517 | None:intergenic |
| TGGAGCATAGTCCCGGACAT+GGG | 0.595290 | 4.3:-6963040 | MS.gene000523:CDS |
| CCTCTCCATGTGTGATTCAG+TGG | 0.595614 | 4.3:-6964516 | MS.gene000523:CDS |
| TGCAGTTTCAAAACTCCGAA+AGG | 0.597777 | 4.3:-6963111 | MS.gene000523:CDS |
| GGAAGTATGGTGGTGTTTCG+GGG | 0.603180 | 4.3:+6965188 | None:intergenic |
| AACCCTGTATATCTCATGCT+AGG | 0.603739 | 4.3:-6964593 | MS.gene000523:CDS |
| CATATCCACTGAATCACACA+TGG | 0.610997 | 4.3:+6964511 | None:intergenic |
| GTCACTGGGAAAACTTATTG+TGG | 0.611690 | 4.3:+6966463 | None:intergenic |
| TATGTGAAGCTGTGGCCACA+TGG | 0.615013 | 4.3:-6966262 | MS.gene000523:CDS |
| TCATCAGTGAGGTGATAACT+GGG | 0.620328 | 4.3:+6966674 | None:intergenic |
| GGAGATAGATGGTTATGATG+TGG | 0.625992 | 4.3:-6965098 | MS.gene000523:CDS |
| ACATTTCGTCTTCTAAATCG+AGG | 0.628109 | 4.3:-6964926 | MS.gene000523:CDS |
| CCCATATTATAAGGGCGGCT+AGG | 0.628897 | 4.3:-6963853 | MS.gene000523:CDS |
| GTTGATCAACTAACCTGTGT+TGG | 0.631542 | 4.3:+6965055 | None:intergenic |
| CAACTCTTTCCAGAAATGTG+TGG | 0.637426 | 4.3:-6966624 | MS.gene000523:intron |
| CATACTTCCCTAGACAGTAT+GGG | 0.637488 | 4.3:-6965174 | MS.gene000523:CDS |
| GCAGAACTATACTGAATACG+TGG | 0.637788 | 4.3:-6964960 | MS.gene000523:intron |
| CACCTAGCATGAGATATACA+GGG | 0.642472 | 4.3:+6964591 | None:intergenic |
| ACAAGGTCCTGTTCTCGCAG+CGG | 0.645836 | 4.3:+6965236 | None:intergenic |
| TAATAAGCTCTACCATGCAA+CGG | 0.648031 | 4.3:+6964319 | None:intergenic |
| CCACTGAATCACACATGGAG+AGG | 0.654918 | 4.3:+6964516 | None:intergenic |
| TGAAAGTTTCTCCATGCACA+AGG | 0.655622 | 4.3:+6965219 | None:intergenic |
| TGTCCGGGACTATGCTCCAG+AGG | 0.668323 | 4.3:+6963044 | None:intergenic |
| TAGCCGCCCTTATAATATGG+GGG | 0.674578 | 4.3:+6963855 | None:intergenic |
| TACTGTCTAGGGAAGTATGG+TGG | 0.686540 | 4.3:+6965178 | None:intergenic |
| ATGTGAAGCTGTGGCCACAT+GGG | 0.687320 | 4.3:-6966261 | MS.gene000523:CDS |
| ATTCAGCTTCTTCATCAGTG+AGG | 0.694845 | 4.3:+6966663 | None:intergenic |
| CAGCACCACTATACTCACCA+AGG | 0.696597 | 4.3:-6965985 | MS.gene000523:CDS |
| TATTTCTCTGAATCTCGACA+AGG | 0.700218 | 4.3:-6964349 | MS.gene000523:CDS |
| AAAGCTTACCTGTTCCCATG+TGG | 0.710847 | 4.3:+6966247 | None:intergenic |
| CAGAACTATACTGAATACGT+GGG | 0.713525 | 4.3:-6964959 | MS.gene000523:CDS |
| GAGAGCTGATCCAAACCGTG+TGG | 0.731846 | 4.3:-6963894 | MS.gene000523:CDS |
| TTGCATCAGAGAAATTACTG+AGG | 0.771834 | 4.3:-6963829 | MS.gene000523:intron |
| GGATATGTATGGCTTCACTG+TGG | 0.776130 | 4.3:-6964495 | MS.gene000523:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAATGCAATTGAATT+TGG | + | chr4.3:6964047-6964066 | None:intergenic | 15.0% |
| !! | AATTATAGTATCAAATTTCT+TGG | - | chr4.3:6966260-6966279 | MS.gene000523:CDS | 15.0% |
| !! | TAACTATAAGTAGTTATAAA+AGG | + | chr4.3:6964531-6964550 | None:intergenic | 15.0% |
| !!! | AAAAAAAAATCTTTAGAACA+CGG | + | chr4.3:6966105-6966124 | None:intergenic | 15.0% |
| !! | AAAAACAATGTGATAGAATA+TGG | + | chr4.3:6963133-6963152 | None:intergenic | 20.0% |
| !! | AAAATTTCAGTTGTCTTAAT+AGG | + | chr4.3:6966294-6966313 | None:intergenic | 20.0% |
| !! | AACATATATTTAAACCACAA+AGG | + | chr4.3:6963671-6963690 | None:intergenic | 20.0% |
| !! | AACTACTTATAGTTAAATTC+AGG | - | chr4.3:6964536-6964555 | MS.gene000523:CDS | 20.0% |
| !! | GAATAAATGTATAATTGTCA+TGG | - | chr4.3:6966170-6966189 | MS.gene000523:intron | 20.0% |
| !! | TAAAAATTAAAGATAGCAAG+TGG | - | chr4.3:6966498-6966517 | MS.gene000523:CDS | 20.0% |
| !! | TAGTTATAAAAGGATAAACA+TGG | + | chr4.3:6964521-6964540 | None:intergenic | 20.0% |
| !! | TGTCCTGAAATAAATTTATA+AGG | + | chr4.3:6965489-6965508 | None:intergenic | 20.0% |
| !!! | GTGTTTATTTTGTATTGAAT+TGG | - | chr4.3:6965844-6965863 | MS.gene000523:intron | 20.0% |
| !!! | TCTCAATTTATGTTTTTTAC+AGG | - | chr4.3:6966653-6966672 | MS.gene000523:CDS | 20.0% |
| ! | AATATTTACCCATTTAGGAA+TGG | + | chr4.3:6963425-6963444 | None:intergenic | 25.0% |
| ! | ATAATTATACTCAAACTGCT+AGG | + | chr4.3:6965872-6965891 | None:intergenic | 25.0% |
| ! | GAAAGAAAATTACACAAACA+TGG | + | chr4.3:6964831-6964850 | None:intergenic | 25.0% |
| ! | GATAAAGTTGTTGAATTAGA+TGG | - | chr4.3:6964974-6964993 | MS.gene000523:intron | 25.0% |
| ! | TAAAGAATCAATGAATTCCT+TGG | + | chr4.3:6963896-6963915 | None:intergenic | 25.0% |
| ! | TAATTCAACAACTTTATCCA+GGG | + | chr4.3:6964972-6964991 | None:intergenic | 25.0% |
| ! | TACTTATTAGTTATTACTGC+TGG | - | chr4.3:6965599-6965618 | MS.gene000523:intron | 25.0% |
| ! | TGATACTAATGACTTTCATT+TGG | - | chr4.3:6965695-6965714 | MS.gene000523:intron | 25.0% |
| ! | TGTTATAAAGTCTCACAAAT+AGG | - | chr4.3:6964582-6964601 | MS.gene000523:CDS | 25.0% |
| ! | TTAGGAATATTTACCCATTT+AGG | + | chr4.3:6963430-6963449 | None:intergenic | 25.0% |
| ! | TTGAATAGTTGTAGTCTATA+AGG | - | chr4.3:6964014-6964033 | MS.gene000523:intron | 25.0% |
| ! | TTGTATAAATCATAAGCAAG+TGG | - | chr4.3:6965822-6965841 | MS.gene000523:intron | 25.0% |
| !! | AATGGTATTAAATGATTTGC+TGG | - | chr4.3:6965404-6965423 | MS.gene000523:intron | 25.0% |
| !! | AGGCCTTATAAATTTATTTC+AGG | - | chr4.3:6965483-6965502 | MS.gene000523:intron | 25.0% |
| !! | ATAAAGATTTTCCTTGATGT+TGG | - | chr4.3:6965730-6965749 | MS.gene000523:intron | 25.0% |
| !! | ATTATTGAAGTGTTCAACTA+AGG | - | chr4.3:6965799-6965818 | MS.gene000523:intron | 25.0% |
| !! | TGACTAAGTATAACTACTTT+TGG | + | chr4.3:6963463-6963482 | None:intergenic | 25.0% |
| !! | TTTAACTAATTTTACACCAC+AGG | + | chr4.3:6963486-6963505 | None:intergenic | 25.0% |
| !!! | AGTGTTCTATAGATTTTAAC+AGG | - | chr4.3:6966137-6966156 | MS.gene000523:intron | 25.0% |
| !!! | ATGGTATTAAATGATTTGCT+GGG | - | chr4.3:6965405-6965424 | MS.gene000523:intron | 25.0% |
| !!! | CTGTGTTTTATTTCAACATT+TGG | - | chr4.3:6964323-6964342 | MS.gene000523:CDS | 25.0% |
| !!! | GTGTTCTATAGATTTTAACA+GGG | - | chr4.3:6966138-6966157 | MS.gene000523:intron | 25.0% |
| !!! | TCATTGATTCTTTACCAAAT+GGG | - | chr4.3:6963902-6963921 | MS.gene000523:CDS | 25.0% |
| !!! | TTCAAGTTTTTAAACATTGC+AGG | + | chr4.3:6966379-6966398 | None:intergenic | 25.0% |
| !!! | TTCATTGATTCTTTACCAAA+TGG | - | chr4.3:6963901-6963920 | MS.gene000523:CDS | 25.0% |
| AAATGGGTATATAGAATGTG+TGG | + | chr4.3:6965204-6965223 | None:intergenic | 30.0% | |
| AATGTGATTACTTGATCAGT+AGG | - | chr4.3:6965463-6965482 | MS.gene000523:intron | 30.0% | |
| AGATATACAGGGTTTCTTAT+AGG | + | chr4.3:6965262-6965281 | None:intergenic | 30.0% | |
| AGCAATTAAAGGATCTTTGA+AGG | + | chr4.3:6965178-6965197 | None:intergenic | 30.0% | |
| AGGGGAAATAAAGAACAAAA+TGG | + | chr4.3:6966077-6966096 | None:intergenic | 30.0% | |
| ATAATTATCAGCCAACATCA+AGG | + | chr4.3:6965744-6965763 | None:intergenic | 30.0% | |
| ATACATACATACAGAAGGTT+CGG | + | chr4.3:6963092-6963111 | None:intergenic | 30.0% | |
| ATACCCATTTGCAAAGAAAT+CGG | - | chr4.3:6965214-6965233 | MS.gene000523:CDS | 30.0% | |
| ATACCTTCTACAACACTTTA+AGG | + | chr4.3:6963800-6963819 | None:intergenic | 30.0% | |
| CAGAAACAGCATTTATAGTA+AGG | + | chr4.3:6965061-6965080 | None:intergenic | 30.0% | |
| CAGTTAAATTTAGCATCATG+AGG | - | chr4.3:6965639-6965658 | MS.gene000523:intron | 30.0% | |
| CATACATACATACATACAGA+AGG | + | chr4.3:6963097-6963116 | None:intergenic | 30.0% | |
| CATCATGAACAAAATGATCA+AGG | - | chr4.3:6965127-6965146 | MS.gene000523:CDS | 30.0% | |
| CTAATTCAACAACTTTATCC+AGG | + | chr4.3:6964973-6964992 | None:intergenic | 30.0% | |
| CTTGAAAACAAGATTTGGAA+AGG | - | chr4.3:6964742-6964761 | MS.gene000523:CDS | 30.0% | |
| GATCTCTTGAAAACAAGATT+TGG | - | chr4.3:6964737-6964756 | MS.gene000523:CDS | 30.0% | |
| GGAAATAAAGAACAAAATGG+GGG | + | chr4.3:6966074-6966093 | None:intergenic | 30.0% | |
| GGGAAATAAAGAACAAAATG+GGG | + | chr4.3:6966075-6966094 | None:intergenic | 30.0% | |
| GGGGAAATAAAGAACAAAAT+GGG | + | chr4.3:6966076-6966095 | None:intergenic | 30.0% | |
| TAAATCATGTTCATGAGTGA+AGG | - | chr4.3:6966339-6966358 | MS.gene000523:intron | 30.0% | |
| TAATACCATTCTTTATAGCC+AGG | + | chr4.3:6965394-6965413 | None:intergenic | 30.0% | |
| TTATTAGTTATTACTGCTGG+TGG | - | chr4.3:6965602-6965621 | MS.gene000523:intron | 30.0% | |
| TTTGTTCATGATGTCATGAA+TGG | + | chr4.3:6965120-6965139 | None:intergenic | 30.0% | |
| ! | AAAGGAGAGTATAAACCTAT+GGG | + | chr4.3:6963653-6963672 | None:intergenic | 30.0% |
| ! | AATTAAAGGATCTTTGAAGG+TGG | + | chr4.3:6965175-6965194 | None:intergenic | 30.0% |
| ! | TTTTAATCTATGTGAAGCTG+TGG | - | chr4.3:6963591-6963610 | MS.gene000523:intron | 30.0% |
| !! | TTAAATGATTTGCTGGGAAT+TGG | - | chr4.3:6965411-6965430 | MS.gene000523:intron | 30.0% |
| !! | TTTAGCTTGCTTCTTAACTA+TGG | + | chr4.3:6966719-6966738 | None:intergenic | 30.0% |
| !!! | ATGAGGATGATTTTAAGTTC+CGG | - | chr4.3:6965656-6965675 | MS.gene000523:intron | 30.0% |
| !!! | TATGTTTTTTACAGGAGAGT+TGG | - | chr4.3:6966661-6966680 | MS.gene000523:CDS | 30.0% |
| AAAAGGATAAACATGGAACG+TGG | + | chr4.3:6964514-6964533 | None:intergenic | 35.0% | |
| AACACAGCTAATTCTAGTGA+TGG | + | chr4.3:6964310-6964329 | None:intergenic | 35.0% | |
| AAGGCTCGAGTAATTCATAA+TGG | + | chr4.3:6965042-6965061 | None:intergenic | 35.0% | |
| AAGGTATGTTTCCTCATCAA+TGG | - | chr4.3:6965146-6965165 | MS.gene000523:CDS | 35.0% | |
| AATGAAGAAGGTAGATGAGA+AGG | + | chr4.3:6965918-6965937 | None:intergenic | 35.0% | |
| ACACACGGCAATAGAAATTA+AGG | + | chr4.3:6963835-6963854 | None:intergenic | 35.0% | |
| ACATTTCGTCTTCTAAATCG+AGG | - | chr4.3:6964935-6964954 | MS.gene000523:CDS | 35.0% | |
| AGACGTGAATAGAACTTAGT+GGG | + | chr4.3:6964881-6964900 | None:intergenic | 35.0% | |
| AGATTTGGAAAGGAGATAGA+TGG | - | chr4.3:6964752-6964771 | MS.gene000523:CDS | 35.0% | |
| ATTTGACTGAGTAGCTGATT+TGG | - | chr4.3:6963308-6963327 | MS.gene000523:intron | 35.0% | |
| ATTTGTGATCAGACAATTGC+AGG | + | chr4.3:6966562-6966581 | None:intergenic | 35.0% | |
| CAGAACTATACTGAATACGT+GGG | - | chr4.3:6964902-6964921 | MS.gene000523:CDS | 35.0% | |
| CAGTTAGAGAGATAATCTGA+AGG | + | chr4.3:6966478-6966497 | None:intergenic | 35.0% | |
| CATAATGGCATTGTAACAAG+TGG | + | chr4.3:6965027-6965046 | None:intergenic | 35.0% | |
| CCAAATGAAGCCATACAAAA+GGG | + | chr4.3:6966416-6966435 | None:intergenic | 35.0% | |
| GATCAGCTTAACAATGAAGA+AGG | + | chr4.3:6965930-6965949 | None:intergenic | 35.0% | |
| GCAAAGAAAAGAAGTCTTGA+TGG | - | chr4.3:6965085-6965104 | MS.gene000523:CDS | 35.0% | |
| GCCATTTGTATTTACATCAC+CGG | - | chr4.3:6963061-6963080 | MS.gene000523:CDS | 35.0% | |
| GGAAAAGATGGCATAAGAAA+AGG | + | chr4.3:6964431-6964450 | None:intergenic | 35.0% | |
| GTTAGATGAAAGCTCATGAA+TGG | - | chr4.3:6966217-6966236 | MS.gene000523:intron | 35.0% | |
| TAATAAGCTCTACCATGCAA+CGG | + | chr4.3:6965545-6965564 | None:intergenic | 35.0% | |
| TAGAGCTTATTACCAGATGA+TGG | - | chr4.3:6965553-6965572 | MS.gene000523:intron | 35.0% | |
| TAGGTTTATACTCTCCTTTG+TGG | - | chr4.3:6963654-6963673 | MS.gene000523:intron | 35.0% | |
| TAGTTATACTTAGTCACCTG+TGG | - | chr4.3:6963467-6963486 | MS.gene000523:intron | 35.0% | |
| TATGTTGCGTTTAGCAATCA+AGG | + | chr4.3:6964460-6964479 | None:intergenic | 35.0% | |
| TATTTCTCTGAATCTCGACA+AGG | - | chr4.3:6965512-6965531 | MS.gene000523:intron | 35.0% | |
| TCCGGTGATGTAAATACAAA+TGG | + | chr4.3:6963065-6963084 | None:intergenic | 35.0% | |
| TGATTCTTTACCAAATGGGT+GGG | - | chr4.3:6963906-6963925 | MS.gene000523:CDS | 35.0% | |
| TGTGATTCAGTGGATATGTA+TGG | - | chr4.3:6965355-6965374 | MS.gene000523:intron | 35.0% | |
| TGTGGTATATCATGTGAACT+AGG | - | chr4.3:6964227-6964246 | MS.gene000523:intron | 35.0% | |
| TTATGTCGCACAGTATTACA+AGG | - | chr4.3:6964358-6964377 | MS.gene000523:CDS | 35.0% | |
| TTGATGTCAGCTTTCTTCTA+GGG | - | chr4.3:6963761-6963780 | MS.gene000523:intron | 35.0% | |
| TTGATTCTTTACCAAATGGG+TGG | - | chr4.3:6963905-6963924 | MS.gene000523:CDS | 35.0% | |
| TTGCATCAGAGAAATTACTG+AGG | - | chr4.3:6966032-6966051 | MS.gene000523:intron | 35.0% | |
| TTGTGATTGTCAATACCCAT+AGG | - | chr4.3:6963635-6963654 | MS.gene000523:intron | 35.0% | |
| ! | AAAGCCGATTTCTTTGCAAA+TGG | + | chr4.3:6965221-6965240 | None:intergenic | 35.0% |
| ! | AAGCCGATTTCTTTGCAAAT+GGG | + | chr4.3:6965220-6965239 | None:intergenic | 35.0% |
| ! | ACTTTTGGCAGTGAATGATT+AGG | + | chr4.3:6963448-6963467 | None:intergenic | 35.0% |
| ! | CAAAGGAGAGTATAAACCTA+TGG | + | chr4.3:6963654-6963673 | None:intergenic | 35.0% |
| ! | CTGTGCTGTTATTGGTAATT+CGG | - | chr4.3:6964712-6964731 | MS.gene000523:intron | 35.0% |
| ! | GATGTGGTCTTAAGAGAAAA+TGG | - | chr4.3:6964779-6964798 | MS.gene000523:CDS | 35.0% |
| ! | TGTGCTGTTATTGGTAATTC+GGG | - | chr4.3:6964713-6964732 | MS.gene000523:intron | 35.0% |
| !! | ATCTTTAGAACACGGTTTGA+AGG | + | chr4.3:6966097-6966116 | None:intergenic | 35.0% |
| !! | TCTCCTTAAAGTGTTGTAGA+AGG | - | chr4.3:6963794-6963813 | MS.gene000523:intron | 35.0% |
| !! | TCTTTAGAACACGGTTTGAA+GGG | + | chr4.3:6966096-6966115 | None:intergenic | 35.0% |
| AAAGAACAAAATGGGGGATG+CGG | + | chr4.3:6966068-6966087 | None:intergenic | 40.0% | |
| AACAACTTTATCCAGGGCTT+TGG | + | chr4.3:6964966-6964985 | None:intergenic | 40.0% | |
| AACCCTGTATATCTCATGCT+AGG | - | chr4.3:6965268-6965287 | MS.gene000523:intron | 40.0% | |
| ACTATACTGAATACGTGGGT+AGG | - | chr4.3:6964906-6964925 | MS.gene000523:CDS | 40.0% | |
| AGGCACGTATAAGAGTAAAC+TGG | + | chr4.3:6966458-6966477 | None:intergenic | 40.0% | |
| ATCCAAACCGTGTGGTAAAA+TGG | - | chr4.3:6965975-6965994 | MS.gene000523:CDS | 40.0% | |
| ATGTGTGGCACAGCAATTAA+AGG | + | chr4.3:6965189-6965208 | None:intergenic | 40.0% | |
| ATTCAGCTTCTTCATCAGTG+AGG | + | chr4.3:6963201-6963220 | None:intergenic | 40.0% | |
| CAACTCTTTCCAGAAATGTG+TGG | - | chr4.3:6963237-6963256 | MS.gene000523:intron | 40.0% | |
| CACCTAGCATGAGATATACA+GGG | + | chr4.3:6965273-6965292 | None:intergenic | 40.0% | |
| CAGACGTGAATAGAACTTAG+TGG | + | chr4.3:6964882-6964901 | None:intergenic | 40.0% | |
| CAGTGACACCATTCCTAAAT+GGG | - | chr4.3:6963414-6963433 | MS.gene000523:intron | 40.0% | |
| CATACTTCCCTAGACAGTAT+GGG | - | chr4.3:6964687-6964706 | MS.gene000523:intron | 40.0% | |
| CATATCCACTGAATCACACA+TGG | + | chr4.3:6965353-6965372 | None:intergenic | 40.0% | |
| CGTATAAGAGTAAACTGGCA+TGG | + | chr4.3:6966453-6966472 | None:intergenic | 40.0% | |
| CTTTCCAGAAATGTGTGGTA+AGG | - | chr4.3:6963242-6963261 | MS.gene000523:intron | 40.0% | |
| GAAACCTTACCACACATTTC+TGG | + | chr4.3:6963249-6963268 | None:intergenic | 40.0% | |
| GAATTCCTTGGTGAGTATAG+TGG | + | chr4.3:6963884-6963903 | None:intergenic | 40.0% | |
| GCAAACAAATGCTAGACTGT+AGG | + | chr4.3:6964389-6964408 | None:intergenic | 40.0% | |
| GCAGAACTATACTGAATACG+TGG | - | chr4.3:6964901-6964920 | MS.gene000523:CDS | 40.0% | |
| GCCAAATGAAGCCATACAAA+AGG | + | chr4.3:6966417-6966436 | None:intergenic | 40.0% | |
| GGAGATAGATGGTTATGATG+TGG | - | chr4.3:6964763-6964782 | MS.gene000523:CDS | 40.0% | |
| GTCACTGGGAAAACTTATTG+TGG | + | chr4.3:6963401-6963420 | None:intergenic | 40.0% | |
| GTTGATCAACTAACCTGTGT+TGG | + | chr4.3:6964809-6964828 | None:intergenic | 40.0% | |
| GTTGATGTCAGCTTTCTTCT+AGG | - | chr4.3:6963760-6963779 | MS.gene000523:intron | 40.0% | |
| GTTGATTATAACTGCCACAG+AGG | - | chr4.3:6964122-6964141 | MS.gene000523:intron | 40.0% | |
| TCATCAGTGAGGTGATAACT+GGG | + | chr4.3:6963190-6963209 | None:intergenic | 40.0% | |
| TCCAAACCGTGTGGTAAAAT+GGG | - | chr4.3:6965976-6965995 | MS.gene000523:CDS | 40.0% | |
| TCCAAGCCCCCATATTATAA+GGG | - | chr4.3:6966000-6966019 | MS.gene000523:intron | 40.0% | |
| TGAAAGTTTCTCCATGCACA+AGG | + | chr4.3:6964645-6964664 | None:intergenic | 40.0% | |
| TGAAATTCGCATAACCTCTG+TGG | + | chr4.3:6964139-6964158 | None:intergenic | 40.0% | |
| TGACAGAAAGATCCCAAAAC+AGG | - | chr4.3:6963544-6963563 | MS.gene000523:intron | 40.0% | |
| TGCAGTTTCAAAACTCCGAA+AGG | - | chr4.3:6966750-6966769 | MS.gene000523:intron | 40.0% | |
| TGGATCCTGGCTATAAAGAA+TGG | - | chr4.3:6965386-6965405 | MS.gene000523:intron | 40.0% | |
| TGTGGTTTGACAGTAATCAC+TGG | + | chr4.3:6963383-6963402 | None:intergenic | 40.0% | |
| TTCATCAGTGAGGTGATAAC+TGG | + | chr4.3:6963191-6963210 | None:intergenic | 40.0% | |
| TTCCAAGCCCCCATATTATA+AGG | - | chr4.3:6965999-6966018 | MS.gene000523:intron | 40.0% | |
| TTGCTGGGAATTGGTATTTC+TGG | - | chr4.3:6965420-6965439 | MS.gene000523:intron | 40.0% | |
| ! | CCCTTTTGTATGGCTTCATT+TGG | - | chr4.3:6966413-6966432 | MS.gene000523:intron | 40.0% |
| ! | TATGATCAAGTGCTGCCTTT+CGG | + | chr4.3:6966768-6966787 | None:intergenic | 40.0% |
| ! | TGAATAGAACTTAGTGGGCA+AGG | + | chr4.3:6964876-6964895 | None:intergenic | 40.0% |
| ! | TGTTTTGTGCAGAGTGCAAA+TGG | - | chr4.3:6963331-6963350 | MS.gene000523:intron | 40.0% |
| ! | TTGGAACCCATTTTACCACA+CGG | + | chr4.3:6965985-6966004 | None:intergenic | 40.0% |
| ! | TTGTTGCTTGCTTTAGCATC+TGG | - | chr4.3:6963031-6963050 | MS.gene000523:CDS | 40.0% |
| !! | AGCTTCAAGTTCACCTGTTT+TGG | + | chr4.3:6963560-6963579 | None:intergenic | 40.0% |
| !! | CATTTAGGAATGGTGTCACT+GGG | + | chr4.3:6963415-6963434 | None:intergenic | 40.0% |
| !! | CTTTAGAACACGGTTTGAAG+GGG | + | chr4.3:6966095-6966114 | None:intergenic | 40.0% |
| !! | GCTTCAAGTTCACCTGTTTT+GGG | + | chr4.3:6963559-6963578 | None:intergenic | 40.0% |
| !! | TGACTTTCATTTGGTGCGTA+AGG | - | chr4.3:6965704-6965723 | MS.gene000523:intron | 40.0% |
| !!! | AGGATGATTTTAAGTTCCGG+AGG | - | chr4.3:6965659-6965678 | MS.gene000523:intron | 40.0% |
| !!! | GGATGATTTTAAGTTCCGGA+GGG | - | chr4.3:6965660-6965679 | MS.gene000523:intron | 40.0% |
| AAAGCTTACCTGTTCCCATG+TGG | + | chr4.3:6963617-6963636 | None:intergenic | 45.0% | |
| AAGAACAAAATGGGGGATGC+GGG | + | chr4.3:6966067-6966086 | None:intergenic | 45.0% | |
| AAGCACAACCATGTATCCTC+TGG | - | chr4.3:6966801-6966820 | MS.gene000523:intron | 45.0% | |
| AAGCCCCCATATTATAAGGG+CGG | - | chr4.3:6966003-6966022 | MS.gene000523:intron | 45.0% | |
| ACCTCAAATGATCTGCAGCT+AGG | - | chr4.3:6964161-6964180 | MS.gene000523:intron | 45.0% | |
| ACCTGAGCAGTCATTACACA+CGG | + | chr4.3:6963850-6963869 | None:intergenic | 45.0% | |
| ACTATGCTCCAGAGGATACA+TGG | + | chr4.3:6966812-6966831 | None:intergenic | 45.0% | |
| ACTATGGAACATGCACGCAA+TGG | + | chr4.3:6966703-6966722 | None:intergenic | 45.0% | |
| AGAAAATGGTGCTCCAACAC+AGG | - | chr4.3:6964793-6964812 | MS.gene000523:intron | 45.0% | |
| AGGCAGCACTTGATCATATG+AGG | - | chr4.3:6966770-6966789 | MS.gene000523:intron | 45.0% | |
| ATATACCACACGCCTTCTTC+AGG | + | chr4.3:6964217-6964236 | None:intergenic | 45.0% | |
| CACTGAATCACACATGGAGA+GGG | + | chr4.3:6965347-6965366 | None:intergenic | 45.0% | |
| CAGCTAGGCAGAGTATATGT+TGG | - | chr4.3:6964176-6964195 | MS.gene000523:intron | 45.0% | |
| CCAGTGACACCATTCCTAAA+TGG | - | chr4.3:6963413-6963432 | MS.gene000523:intron | 45.0% | |
| CCATACTGTCTAGGGAAGTA+TGG | + | chr4.3:6964689-6964708 | None:intergenic | 45.0% | |
| CCATACTTCCCTAGACAGTA+TGG | - | chr4.3:6964686-6964705 | MS.gene000523:intron | 45.0% | |
| CCTAGCCGCCCTTATAATAT+GGG | + | chr4.3:6966011-6966030 | None:intergenic | 45.0% | |
| CTAGCCGCCCTTATAATATG+GGG | + | chr4.3:6966010-6966029 | None:intergenic | 45.0% | |
| GACAATTGCAGGATAGCATG+AGG | + | chr4.3:6966551-6966570 | None:intergenic | 45.0% | |
| GCACCTAGCATGAGATATAC+AGG | + | chr4.3:6965274-6965293 | None:intergenic | 45.0% | |
| GCTTGGCGTAGGATCAATAA+AGG | - | chr4.3:6963937-6963956 | MS.gene000523:intron | 45.0% | |
| GGATATGTATGGCTTCACTG+TGG | - | chr4.3:6965366-6965385 | MS.gene000523:intron | 45.0% | |
| GTTCAGCTGCAAAAGGAACT+GGG | - | chr4.3:6965302-6965321 | MS.gene000523:intron | 45.0% | |
| GTTTAGCAATCAAGGCAGAG+TGG | + | chr4.3:6964452-6964471 | None:intergenic | 45.0% | |
| TAGCCGCCCTTATAATATGG+GGG | + | chr4.3:6966009-6966028 | None:intergenic | 45.0% | |
| TCAAGGCAGAGTGGAAAAGA+TGG | + | chr4.3:6964443-6964462 | None:intergenic | 45.0% | |
| TCCTAGCCGCCCTTATAATA+TGG | + | chr4.3:6966012-6966031 | None:intergenic | 45.0% | |
| TGAGCTCTTCATCCTGAAGA+AGG | - | chr4.3:6964202-6964221 | MS.gene000523:intron | 45.0% | |
| TGCAAAAGGAACTGGGCTTA+AGG | - | chr4.3:6965309-6965328 | MS.gene000523:intron | 45.0% | |
| TGTTCATGAGTGAAGGCTGT+TGG | - | chr4.3:6966346-6966365 | MS.gene000523:intron | 45.0% | |
| TTCTTTACCAAATGGGTGGG+AGG | - | chr4.3:6963909-6963928 | MS.gene000523:CDS | 45.0% | |
| ! | AACTTAGTGGGCAAGGTCTT+AGG | + | chr4.3:6964869-6964888 | None:intergenic | 45.0% |
| ! | ACCCATTTTACCACACGGTT+TGG | + | chr4.3:6965980-6965999 | None:intergenic | 45.0% |
| ! | AGGGAAGTATGGTGGTGTTT+CGG | + | chr4.3:6964678-6964697 | None:intergenic | 45.0% |
| ! | CTGATCACAGCCCTTTTGTA+TGG | - | chr4.3:6966403-6966422 | MS.gene000523:intron | 45.0% |
| ! | GAAGGTGGATTCCATTGATG+AGG | + | chr4.3:6965160-6965179 | None:intergenic | 45.0% |
| ! | TACTGTCTAGGGAAGTATGG+TGG | + | chr4.3:6964686-6964705 | None:intergenic | 45.0% |
| ! | TCACTTTAACTTACGCCCTC+CGG | + | chr4.3:6965678-6965697 | None:intergenic | 45.0% |
| ! | TCCTTTGGTTCAGCTGCAAA+AGG | - | chr4.3:6965295-6965314 | MS.gene000523:intron | 45.0% |
| ! | TCCTTTTGCAGCTGAACCAA+AGG | + | chr4.3:6965299-6965318 | None:intergenic | 45.0% |
| ! | TGGGCAAGGTCTTAGGTTTT+GGG | + | chr4.3:6964862-6964881 | None:intergenic | 45.0% |
| ! | TTCATTTGGCCCCAGACTTT+TGG | - | chr4.3:6966427-6966446 | MS.gene000523:intron | 45.0% |
| ! | TTTTACAGGAGAGTTGGAGC+AGG | - | chr4.3:6966667-6966686 | MS.gene000523:CDS | 45.0% |
| !! | AATCGGCTTTTGTCTTCTGC+AGG | - | chr4.3:6965231-6965250 | MS.gene000523:CDS | 45.0% |
| !! | CCATTTAGGAATGGTGTCAC+TGG | + | chr4.3:6963416-6963435 | None:intergenic | 45.0% |
| !! | TACCAGATGATGGAGTGCTT+GGG | - | chr4.3:6965563-6965582 | MS.gene000523:intron | 45.0% |
| !! | TTACCAGATGATGGAGTGCT+TGG | - | chr4.3:6965562-6965581 | MS.gene000523:intron | 45.0% |
| AACTGGCATGGCCAAAAGTC+TGG | + | chr4.3:6966441-6966460 | None:intergenic | 50.0% | |
| ACTGGCATGGCCAAAAGTCT+GGG | + | chr4.3:6966440-6966459 | None:intergenic | 50.0% | |
| AGGATAGCATGAGGCATGCA+AGG | + | chr4.3:6966542-6966561 | None:intergenic | 50.0% | |
| AGTGCAAAGCAACCCATGTC+CGG | + | chr4.3:6966836-6966855 | None:intergenic | 50.0% | |
| ATGTGAAGCTGTGGCCACAT+GGG | - | chr4.3:6963600-6963619 | MS.gene000523:intron | 50.0% | |
| CAGCACCACTATACTCACCA+AGG | - | chr4.3:6963876-6963895 | MS.gene000523:CDS | 50.0% | |
| CCACTGAATCACACATGGAG+AGG | + | chr4.3:6965348-6965367 | None:intergenic | 50.0% | |
| CCCATATTATAAGGGCGGCT+AGG | - | chr4.3:6966008-6966027 | MS.gene000523:intron | 50.0% | |
| CCTCTCCATGTGTGATTCAG+TGG | - | chr4.3:6965345-6965364 | MS.gene000523:intron | 50.0% | |
| CTCATGCTAGGTGCTTCCTT+TGG | - | chr4.3:6965280-6965299 | MS.gene000523:intron | 50.0% | |
| GATCAGCTCTCATGGGAGAA+TGG | + | chr4.3:6965958-6965977 | None:intergenic | 50.0% | |
| GCCCTTATAATATGGGGGCT+TGG | + | chr4.3:6966004-6966023 | None:intergenic | 50.0% | |
| GCCTAGCTGCAGATCATTTG+AGG | + | chr4.3:6964165-6964184 | None:intergenic | 50.0% | |
| GGTTCAGCTGCAAAAGGAAC+TGG | - | chr4.3:6965301-6965320 | MS.gene000523:intron | 50.0% | |
| GTGTAATGACTGCTCAGGTG+CGG | - | chr4.3:6963851-6963870 | MS.gene000523:CDS | 50.0% | |
| TACAGAAGGTTCGGAGAGTC+CGG | + | chr4.3:6963083-6963102 | None:intergenic | 50.0% | |
| TATGGCTTCACTGTGGATCC+TGG | - | chr4.3:6965373-6965392 | MS.gene000523:intron | 50.0% | |
| TATGTGAAGCTGTGGCCACA+TGG | - | chr4.3:6963599-6963618 | MS.gene000523:intron | 50.0% | |
| ! | ACGGTTTGGATCAGCTCTCA+TGG | + | chr4.3:6965966-6965985 | None:intergenic | 50.0% |
| ! | CGGTTTGGATCAGCTCTCAT+GGG | + | chr4.3:6965965-6965984 | None:intergenic | 50.0% |
| ! | GGAAGTATGGTGGTGTTTCG+GGG | + | chr4.3:6964676-6964695 | None:intergenic | 50.0% |
| ! | GGGAAGTATGGTGGTGTTTC+GGG | + | chr4.3:6964677-6964696 | None:intergenic | 50.0% |
| ! | GTGCAGAGTGCAAATGGACT+TGG | - | chr4.3:6963337-6963356 | MS.gene000523:intron | 50.0% |
| ! | GTGGGCAAGGTCTTAGGTTT+TGG | + | chr4.3:6964863-6964882 | None:intergenic | 50.0% |
| ! | TATGGGCGCTGTGCTGTTAT+TGG | - | chr4.3:6964704-6964723 | MS.gene000523:intron | 50.0% |
| ! | TTCATCCTGAAGAAGGCGTG+TGG | - | chr4.3:6964209-6964228 | MS.gene000523:intron | 50.0% |
| !! | TATCCTCTGGAGCATAGTCC+CGG | - | chr4.3:6966814-6966833 | MS.gene000523:intron | 50.0% |
| ACAAGGTCCTGTTCTCGCAG+CGG | + | chr4.3:6964628-6964647 | None:intergenic | 55.0% | |
| CACAGCGCCCATACTGTCTA+GGG | + | chr4.3:6964697-6964716 | None:intergenic | 55.0% | |
| CGAGAACAGGACCTTGTGCA+TGG | - | chr4.3:6964631-6964650 | MS.gene000523:intron | 55.0% | |
| CTCCCAAGCACTCCATCATC+TGG | + | chr4.3:6965568-6965587 | None:intergenic | 55.0% | |
| CTCTACCATGCAACGGCGTA+TGG | + | chr4.3:6965538-6965557 | None:intergenic | 55.0% | |
| CTGGCATGGCCAAAAGTCTG+GGG | + | chr4.3:6966439-6966458 | None:intergenic | 55.0% | |
| GAGAGCTGATCCAAACCGTG+TGG | - | chr4.3:6965967-6965986 | MS.gene000523:CDS | 55.0% | |
| GCATACTCCTCCCACCCATT+TGG | + | chr4.3:6963919-6963938 | None:intergenic | 55.0% | |
| GCCGTGTGTAATGACTGCTC+AGG | - | chr4.3:6963846-6963865 | MS.gene000523:CDS | 55.0% | |
| GTGCAAAGCAACCCATGTCC+GGG | + | chr4.3:6966835-6966854 | None:intergenic | 55.0% | |
| TGGAGCATAGTCCCGGACAT+GGG | - | chr4.3:6966821-6966840 | MS.gene000523:CDS | 55.0% | |
| ! | ATGGGTGGGAGGAGTATGCT+TGG | - | chr4.3:6963920-6963939 | MS.gene000523:CDS | 55.0% |
| AGCTGTGGCCACATGGGAAC+AGG | - | chr4.3:6963606-6963625 | MS.gene000523:intron | 60.0% | |
| CAAGGCCATACGCCGTTGCA+TGG | - | chr4.3:6965530-6965549 | MS.gene000523:intron | 60.0% | |
| CTGGAGCATAGTCCCGGACA+TGG | - | chr4.3:6966820-6966839 | MS.gene000523:CDS | 60.0% | |
| GCACAGCGCCCATACTGTCT+AGG | + | chr4.3:6964698-6964717 | None:intergenic | 60.0% | |
| GCAGAAACCGCTGCGAGAAC+AGG | - | chr4.3:6964618-6964637 | MS.gene000523:intron | 60.0% | |
| TCGAGGATCTGCCAAAGCCC+TGG | - | chr4.3:6964952-6964971 | MS.gene000523:CDS | 60.0% | |
| TGTCCGGGACTATGCTCCAG+AGG | + | chr4.3:6966820-6966839 | None:intergenic | 60.0% | |
| ! | GGGAGGAGTATGCTTGGCGT+AGG | - | chr4.3:6963926-6963945 | MS.gene000523:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 6963010 | 6966873 | 6963010 | ID=MS.gene000523 |
| chr4.3 | mRNA | 6963010 | 6966873 | 6963010 | ID=MS.gene000523.t1;Parent=MS.gene000523 |
| chr4.3 | exon | 6966816 | 6966873 | 6966816 | ID=MS.gene000523.t1.exon1;Parent=MS.gene000523.t1 |
| chr4.3 | CDS | 6966816 | 6966873 | 6966816 | ID=cds.MS.gene000523.t1;Parent=MS.gene000523.t1 |
| chr4.3 | exon | 6966625 | 6966698 | 6966625 | ID=MS.gene000523.t1.exon2;Parent=MS.gene000523.t1 |
| chr4.3 | CDS | 6966625 | 6966698 | 6966625 | ID=cds.MS.gene000523.t1;Parent=MS.gene000523.t1 |
| chr4.3 | exon | 6966448 | 6966540 | 6966448 | ID=MS.gene000523.t1.exon3;Parent=MS.gene000523.t1 |
| chr4.3 | CDS | 6966448 | 6966540 | 6966448 | ID=cds.MS.gene000523.t1;Parent=MS.gene000523.t1 |
| chr4.3 | exon | 6966256 | 6966333 | 6966256 | ID=MS.gene000523.t1.exon4;Parent=MS.gene000523.t1 |
| chr4.3 | CDS | 6966256 | 6966333 | 6966256 | ID=cds.MS.gene000523.t1;Parent=MS.gene000523.t1 |
| chr4.3 | exon | 6965915 | 6966015 | 6965915 | ID=MS.gene000523.t1.exon5;Parent=MS.gene000523.t1 |
| chr4.3 | CDS | 6965915 | 6966015 | 6965915 | ID=cds.MS.gene000523.t1;Parent=MS.gene000523.t1 |
| chr4.3 | exon | 6965069 | 6965261 | 6965069 | ID=MS.gene000523.t1.exon6;Parent=MS.gene000523.t1 |
| chr4.3 | CDS | 6965069 | 6965261 | 6965069 | ID=cds.MS.gene000523.t1;Parent=MS.gene000523.t1 |
| chr4.3 | exon | 6964888 | 6964978 | 6964888 | ID=MS.gene000523.t1.exon7;Parent=MS.gene000523.t1 |
| chr4.3 | CDS | 6964888 | 6964978 | 6964888 | ID=cds.MS.gene000523.t1;Parent=MS.gene000523.t1 |
| chr4.3 | exon | 6964735 | 6964799 | 6964735 | ID=MS.gene000523.t1.exon8;Parent=MS.gene000523.t1 |
| chr4.3 | CDS | 6964735 | 6964799 | 6964735 | ID=cds.MS.gene000523.t1;Parent=MS.gene000523.t1 |
| chr4.3 | exon | 6964476 | 6964630 | 6964476 | ID=MS.gene000523.t1.exon9;Parent=MS.gene000523.t1 |
| chr4.3 | CDS | 6964476 | 6964630 | 6964476 | ID=cds.MS.gene000523.t1;Parent=MS.gene000523.t1 |
| chr4.3 | exon | 6964297 | 6964378 | 6964297 | ID=MS.gene000523.t1.exon10;Parent=MS.gene000523.t1 |
| chr4.3 | CDS | 6964297 | 6964378 | 6964297 | ID=cds.MS.gene000523.t1;Parent=MS.gene000523.t1 |
| chr4.3 | exon | 6963830 | 6963939 | 6963830 | ID=MS.gene000523.t1.exon11;Parent=MS.gene000523.t1 |
| chr4.3 | CDS | 6963830 | 6963939 | 6963830 | ID=cds.MS.gene000523.t1;Parent=MS.gene000523.t1 |
| chr4.3 | exon | 6963010 | 6963208 | 6963010 | ID=MS.gene000523.t1.exon12;Parent=MS.gene000523.t1 |
| chr4.3 | CDS | 6963010 | 6963208 | 6963010 | ID=cds.MS.gene000523.t1;Parent=MS.gene000523.t1 |
| Gene Sequence |
| Protein sequence |
