AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene001159

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene001159.t1 MTR_4g107610 97.529 607 15 0 1 607 1 607 0.0 1227
MS.gene001159.t1 MTR_7g064780 50.430 581 269 6 25 599 20 587 0.0 589
MS.gene001159.t1 MTR_7g064800 50.502 598 284 6 5 595 1 593 0.0 584
MS.gene001159.t1 MTR_5g038060 41.997 581 322 9 2 573 4 578 1.03e-159 471
MS.gene001159.t1 MTR_4g107530 41.206 597 323 9 5 582 2 589 1.01e-157 466
MS.gene001159.t1 MTR_4g107580 40.604 596 332 9 18 600 12 598 4.93e-156 461
MS.gene001159.t1 MTR_8g469480 41.591 553 302 9 34 573 41 585 5.75e-147 438
MS.gene001159.t1 MTR_4g107510 40.876 548 307 7 34 569 39 581 3.71e-146 436
MS.gene001159.t1 MTR_5g038190 36.607 560 345 7 17 569 9 565 1.12e-132 400
MS.gene001159.t1 MTR_8g469470 37.809 566 336 8 16 569 17 578 4.21e-129 392
MS.gene001159.t1 MTR_5g055000 34.946 558 346 7 28 577 15 563 8.15e-116 357
MS.gene001159.t1 MTR_7g088820 34.118 595 366 11 17 600 11 590 1.84e-112 349
MS.gene001159.t1 MTR_7g088825 35.044 565 347 9 24 578 15 569 2.57e-112 348
MS.gene001159.t1 MTR_8g103233 35.305 558 339 11 15 562 1 546 1.11e-111 346
MS.gene001159.t1 MTR_7g067010 34.843 574 350 10 2 569 3 558 2.82e-110 342
MS.gene001159.t1 MTR_1g009200 36.868 613 344 14 8 607 4 586 1.15e-109 341
MS.gene001159.t1 MTR_4g015080 35.805 553 335 10 25 569 28 568 5.33e-109 339
MS.gene001159.t1 MTR_7g088790 34.010 591 360 11 24 603 22 593 2.39e-108 338
MS.gene001159.t1 MTR_7g098200 34.271 569 348 8 3 562 6 557 3.02e-108 338
MS.gene001159.t1 MTR_7g098200 34.452 566 341 8 3 562 6 547 2.27e-107 335
MS.gene001159.t1 MTR_2g101650 33.953 592 368 13 16 595 10 590 6.08e-106 332
MS.gene001159.t1 MTR_1g026770 32.620 561 361 8 29 582 13 563 2.10e-104 327
MS.gene001159.t1 MTR_7g088820 35.075 536 322 11 76 600 8 528 9.18e-104 324
MS.gene001159.t1 MTR_3g462710 34.087 575 355 11 2 569 3 560 1.04e-103 325
MS.gene001159.t1 MTR_1g026740 32.258 558 361 9 18 569 7 553 2.21e-103 324
MS.gene001159.t1 MTR_1g026750 33.273 556 357 8 33 582 20 567 4.45e-103 323
MS.gene001159.t1 MTR_2g101640 32.818 582 367 10 25 599 17 581 5.14e-103 325
MS.gene001159.t1 MTR_7g098180 32.933 583 364 7 31 597 31 602 2.06e-102 323
MS.gene001159.t1 MTR_7g098160 32.530 581 365 8 31 595 33 602 1.81e-101 320
MS.gene001159.t1 MTR_4g011280 30.706 609 401 11 1 596 1 601 1.84e-100 318
MS.gene001159.t1 MTR_4g019580 34.835 577 357 11 1 569 1 566 2.32e-100 317
MS.gene001159.t1 MTR_7g065080 34.846 551 339 10 33 581 33 565 3.62e-100 317
MS.gene001159.t1 MTR_3g112460 33.454 553 346 11 27 575 19 553 9.13e-100 315
MS.gene001159.t1 MTR_3g112450 34.720 553 341 10 27 575 19 555 5.34e-99 313
MS.gene001159.t1 MTR_1g075440 33.849 582 353 10 31 600 28 589 8.02e-98 311
MS.gene001159.t1 MTR_3g112470 33.092 553 348 10 27 575 19 553 8.30e-98 310
MS.gene001159.t1 MTR_7g098230 32.162 569 356 11 40 595 35 586 1.65e-97 310
MS.gene001159.t1 MTR_3g069420 34.851 571 346 12 33 597 36 586 1.17e-96 308
MS.gene001159.t1 MTR_2g101590 33.154 558 356 10 14 562 9 558 3.42e-96 308
MS.gene001159.t1 MTR_3g069500 31.818 572 363 11 31 601 35 580 3.04e-95 303
MS.gene001159.t1 MTR_7g098040 31.336 584 374 8 31 598 34 606 4.73e-95 304
MS.gene001159.t1 MTR_7g065080 36.437 494 294 10 90 581 3 478 1.93e-94 299
MS.gene001159.t1 MTR_2g101610 32.855 557 351 11 18 562 14 559 2.80e-94 303
MS.gene001159.t1 MTR_7g088820 35.152 495 295 11 117 600 1 480 4.71e-94 297
MS.gene001159.t1 MTR_7g098090 31.741 586 368 9 31 595 33 607 1.22e-93 300
MS.gene001159.t1 MTR_1g041875 33.273 556 349 9 1 552 3 540 2.02e-93 299
MS.gene001159.t1 MTR_3g069440 32.180 578 354 14 31 596 33 584 3.13e-93 298
MS.gene001159.t1 MTR_1g041835 33.218 578 362 9 1 570 1 562 9.62e-93 297
MS.gene001159.t1 MTR_1g041815 33.737 578 359 9 1 570 1 562 3.02e-92 296
MS.gene001159.t1 MTR_1g042310 32.203 590 366 12 1 581 3 567 4.43e-92 296
MS.gene001159.t1 MTR_4g033325 32.796 558 336 9 27 576 27 553 1.72e-90 290
MS.gene001159.t1 MTR_7g098220 32.847 548 349 6 31 570 30 566 3.07e-90 291
MS.gene001159.t1 MTR_3g014790 33.214 557 322 11 34 574 20 542 3.89e-90 290
MS.gene001159.t1 MTR_5g012270 31.922 567 366 9 27 582 25 582 7.02e-89 287
MS.gene001159.t1 MTR_7g098200 34.812 451 275 6 120 562 4 443 1.22e-88 283
MS.gene001159.t1 MTR_3g005010 32.182 550 325 10 31 570 30 541 7.52e-88 283
MS.gene001159.t1 MTR_2g093640 31.362 558 350 7 26 569 6 544 3.30e-87 281
MS.gene001159.t1 MTR_1g057460 30.866 554 355 10 30 578 43 573 3.55e-87 282
MS.gene001159.t1 MTR_1g041885 33.399 506 321 7 50 552 1 493 4.65e-87 281
MS.gene001159.t1 MTR_1g042310 32.844 545 339 10 46 581 4 530 5.10e-87 281
MS.gene001159.t1 MTR_2g093160 31.843 559 346 9 26 569 6 544 2.33e-86 279
MS.gene001159.t1 MTR_5g014150 30.404 569 382 8 2 562 16 578 7.77e-86 280
MS.gene001159.t1 MTR_2g101560 32.404 574 363 12 18 578 14 575 8.49e-86 280
MS.gene001159.t1 MTR_7g098220 32.895 532 338 6 47 570 2 522 3.01e-85 276
MS.gene001159.t1 MTR_1g042310 32.717 541 337 10 50 581 1 523 8.11e-85 275
MS.gene001159.t1 MTR_2g093180 32.737 559 342 7 26 569 6 545 1.08e-84 275
MS.gene001159.t1 MTR_8g038880 32.297 579 347 10 28 589 17 567 4.17e-83 271
MS.gene001159.t1 MTR_1g085090 31.942 551 351 10 30 575 18 549 1.25e-82 271
MS.gene001159.t1 MTR_0294s0020 30.651 584 363 10 2 576 3 553 1.55e-82 270
MS.gene001159.t1 MTR_3g462710 35.230 457 280 10 120 569 4 451 1.84e-82 266
MS.gene001159.t1 MTR_3g072300 30.254 552 365 8 27 570 20 559 1.92e-82 270
MS.gene001159.t1 MTR_4g114340 31.760 551 357 9 17 562 13 549 2.19e-82 270
MS.gene001159.t1 MTR_4g101380 32.456 570 366 9 25 582 21 583 4.11e-82 270
MS.gene001159.t1 MTR_4g033315 30.824 558 349 9 25 574 25 553 7.41e-82 268
MS.gene001159.t1 MTR_4g033310 30.824 558 349 9 25 574 25 553 7.41e-82 268
MS.gene001159.t1 MTR_5g085850 33.272 541 340 9 25 562 24 546 1.96e-80 265
MS.gene001159.t1 MTR_2g005130 30.756 569 364 11 2 569 21 560 4.27e-80 264
MS.gene001159.t1 MTR_1g057460 30.667 525 336 10 59 578 1 502 9.08e-80 261
MS.gene001159.t1 MTR_0236s0050 31.619 525 331 11 59 578 1 502 3.61e-79 259
MS.gene001159.t1 MTR_7g111260 32.021 559 352 13 18 569 6 543 4.87e-79 261
MS.gene001159.t1 MTR_7g006540 31.034 580 370 13 31 592 63 630 5.54e-79 262
MS.gene001159.t1 MTR_4g033330 31.391 532 328 9 31 554 31 533 9.09e-79 259
MS.gene001159.t1 MTR_4g098800 29.843 573 383 9 2 567 8 568 2.31e-78 259
MS.gene001159.t1 MTR_4g098800 30.303 561 372 9 14 567 85 633 1.56e-77 259
MS.gene001159.t1 MTR_5g012290 30.156 577 378 12 18 582 17 580 1.81e-77 257
MS.gene001159.t1 MTR_5g038380 30.496 564 353 8 33 574 30 576 1.36e-76 254
MS.gene001159.t1 MTR_2g017750 28.725 557 370 11 33 569 36 585 9.73e-75 250
MS.gene001159.t1 MTR_3g100980 30.265 565 359 10 30 581 15 557 2.41e-74 248
MS.gene001159.t1 MTR_4g033325 33.103 435 266 6 149 576 13 429 2.61e-74 244
MS.gene001159.t1 MTR_4g033325 33.103 435 266 6 149 576 39 455 3.38e-74 244
MS.gene001159.t1 MTR_4g033395 31.781 494 302 8 27 512 28 494 7.06e-73 242
MS.gene001159.t1 MTR_7g010820 30.769 559 362 11 5 549 1 548 1.75e-72 244
MS.gene001159.t1 MTR_7g005930 28.152 579 393 11 1 569 1 566 2.29e-72 243
MS.gene001159.t1 MTR_4g033375 31.717 495 305 7 25 512 26 494 3.65e-72 241
MS.gene001159.t1 MTR_1g116930 28.055 581 394 12 24 601 16 575 4.86e-72 243
MS.gene001159.t1 MTR_4g107670 29.964 554 360 11 33 569 26 568 9.81e-72 241
MS.gene001159.t1 MTR_7g098150 31.757 444 285 6 31 466 33 466 1.08e-71 239
MS.gene001159.t1 MTR_8g469310 30.182 550 370 7 33 573 28 572 7.74e-71 239
MS.gene001159.t1 MTR_3g100980 28.836 593 359 11 30 581 15 585 2.52e-68 233
MS.gene001159.t1 MTR_4g033385 31.264 435 277 6 149 576 37 456 3.14e-67 226
MS.gene001159.t1 MTR_4g123537 29.391 558 369 9 16 569 31 567 9.05e-67 229
MS.gene001159.t1 MTR_7g013270 27.381 588 398 13 17 596 76 642 1.22e-64 224
MS.gene001159.t1 MTR_8g087780 28.893 533 361 8 26 543 16 545 4.52e-63 218
MS.gene001159.t1 MTR_8g087810 29.104 536 357 10 26 543 16 546 2.42e-62 216
MS.gene001159.t1 MTR_7g098210 29.328 491 253 11 86 562 22 432 2.56e-58 202
MS.gene001159.t1 MTR_6g008690 28.415 549 327 15 48 569 24 533 6.50e-52 187
MS.gene001159.t1 MTR_7g052600 27.993 568 353 14 15 569 1 525 1.18e-50 183
MS.gene001159.t1 MTR_7g051880 27.944 501 309 11 76 569 70 525 6.30e-49 178
MS.gene001159.t1 MTR_1g009170 30.976 410 213 11 155 551 5 357 2.40e-48 174
MS.gene001159.t1 MTR_7g051830 27.523 545 355 11 26 569 20 525 2.08e-47 174
MS.gene001159.t1 MTR_4g024930 27.417 569 384 13 2 569 12 552 2.89e-47 175
MS.gene001159.t1 MTR_4g033310 26.667 345 225 7 241 574 162 489 4.64e-34 136
MS.gene001159.t1 MTR_4g033310 35.912 181 104 2 25 205 25 193 1.55e-24 107
MS.gene001159.t1 MTR_7g064160 54.945 91 41 0 25 115 23 113 4.04e-28 109
MS.gene001159.t1 MTR_8g091265 38.889 108 63 3 301 406 3 109 1.19e-17 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene001159.t1 AT5G28470 56.738 564 236 7 15 575 1 559 0.0 667
MS.gene001159.t1 AT5G28470 56.383 564 236 7 15 575 1 557 0.0 659
MS.gene001159.t1 AT1G69870 41.480 581 318 8 26 598 46 612 2.29e-159 470
MS.gene001159.t1 AT1G27080 42.857 553 302 8 29 577 12 554 1.10e-150 447
MS.gene001159.t1 AT1G27080 42.994 521 283 8 61 577 2 512 1.58e-138 414
MS.gene001159.t1 AT5G62680 38.669 556 325 6 34 577 46 597 2.81e-138 416
MS.gene001159.t1 AT1G18880 38.571 560 326 7 17 562 1 556 7.92e-138 414
MS.gene001159.t1 AT3G47960 36.650 603 362 8 12 600 40 636 1.56e-135 410
MS.gene001159.t1 AT1G52190 34.551 602 366 14 16 605 7 592 4.55e-122 374
MS.gene001159.t1 AT1G69860 37.823 542 323 7 30 569 17 546 3.29e-120 367
MS.gene001159.t1 AT3G16180 35.392 599 356 13 11 593 3 586 1.01e-119 367
MS.gene001159.t1 AT3G54140 35.009 577 350 11 1 569 1 560 1.58e-115 356
MS.gene001159.t1 AT3G54140 35.009 577 350 11 1 569 1 560 1.58e-115 356
MS.gene001159.t1 AT5G01180 33.449 574 360 11 3 569 2 560 6.82e-107 333
MS.gene001159.t1 AT5G01180 33.449 574 360 11 3 569 2 560 6.82e-107 333
MS.gene001159.t1 AT5G01180 33.449 574 360 11 3 569 2 560 6.82e-107 333
MS.gene001159.t1 AT1G68570 35.424 542 338 6 29 562 21 558 2.97e-105 330
MS.gene001159.t1 AT2G02040 34.168 559 339 12 25 569 35 578 1.97e-102 322
MS.gene001159.t1 AT1G68570 35.606 528 328 6 43 562 5 528 3.12e-102 321
MS.gene001159.t1 AT1G62200 36.667 540 324 9 25 558 46 573 2.52e-100 317
MS.gene001159.t1 AT2G37900 32.718 596 372 10 1 588 1 575 8.53e-99 313
MS.gene001159.t1 AT3G53960 34.247 584 355 14 1 569 1 570 6.31e-95 303
MS.gene001159.t1 AT1G62200 34.798 569 324 10 25 558 46 602 3.78e-94 302
MS.gene001159.t1 AT3G54450 32.162 569 347 9 28 582 9 552 4.23e-94 300
MS.gene001159.t1 AT1G62200 34.798 569 324 10 25 558 60 616 7.29e-94 301
MS.gene001159.t1 AT5G46050 33.154 558 348 8 3 552 4 544 9.72e-94 300
MS.gene001159.t1 AT2G26690 33.394 548 351 8 17 562 13 548 3.98e-91 293
MS.gene001159.t1 AT2G37900 33.789 512 317 9 78 588 6 496 6.40e-90 287
MS.gene001159.t1 AT3G45660 31.615 582 357 11 18 595 8 552 1.06e-89 288
MS.gene001159.t1 AT3G45660 31.615 582 357 11 18 595 8 552 1.06e-89 288
MS.gene001159.t1 AT3G45660 30.885 599 373 11 1 595 12 573 1.16e-89 289
MS.gene001159.t1 AT1G22550 31.724 580 357 11 2 570 6 557 1.47e-89 288
MS.gene001159.t1 AT2G02020 32.065 552 321 9 25 569 36 540 2.27e-89 287
MS.gene001159.t1 AT1G59740 31.934 548 357 7 23 566 36 571 1.22e-88 286
MS.gene001159.t1 AT1G33440 33.700 546 335 10 33 569 40 567 2.62e-87 283
MS.gene001159.t1 AT2G26690 34.100 522 333 7 43 562 3 515 3.83e-87 281
MS.gene001159.t1 AT3G45680 29.915 585 375 10 18 601 8 558 5.87e-87 281
MS.gene001159.t1 AT5G46040 31.786 560 353 11 3 552 4 544 7.66e-87 282
MS.gene001159.t1 AT3G45650 31.678 584 368 11 10 589 2 558 4.37e-86 279
MS.gene001159.t1 AT3G45720 31.579 551 353 8 33 582 21 548 3.24e-85 276
MS.gene001159.t1 AT3G21670 31.333 600 386 10 5 599 1 579 1.21e-84 276
MS.gene001159.t1 AT2G26690 33.984 512 327 7 53 562 1 503 3.40e-84 273
MS.gene001159.t1 AT1G22540 32.793 555 334 11 17 561 19 544 5.57e-84 273
MS.gene001159.t1 AT2G40460 31.175 587 369 12 1 578 1 561 1.09e-83 273
MS.gene001159.t1 AT1G12110 32.479 585 363 13 27 600 23 586 2.11e-82 270
MS.gene001159.t1 AT3G45700 30.420 572 356 12 29 598 14 545 1.19e-81 267
MS.gene001159.t1 AT1G22570 31.330 549 333 13 17 550 19 538 5.61e-81 266
MS.gene001159.t1 AT3G45650 30.328 610 368 12 10 589 2 584 2.51e-80 265
MS.gene001159.t1 AT1G72140 31.972 563 327 13 23 570 29 550 3.63e-80 263
MS.gene001159.t1 AT1G72125 30.017 583 358 10 8 570 2 554 1.68e-79 262
MS.gene001159.t1 AT3G45690 28.621 580 344 12 17 596 5 514 3.86e-78 257
MS.gene001159.t1 AT1G69850 31.306 559 353 8 33 569 27 576 4.94e-78 258
MS.gene001159.t1 AT1G32450 28.331 593 407 8 17 599 26 610 6.00e-78 259
MS.gene001159.t1 AT1G72130 30.991 555 334 10 26 572 20 533 6.68e-77 254
MS.gene001159.t1 AT5G13400 30.175 570 368 11 27 578 60 617 5.21e-76 254
MS.gene001159.t1 AT5G46050 34.459 444 271 7 117 552 1 432 7.90e-76 249
MS.gene001159.t1 AT3G45710 28.970 573 370 12 29 598 19 557 1.78e-75 251
MS.gene001159.t1 AT1G72120 29.277 567 354 9 17 570 18 550 3.00e-74 248
MS.gene001159.t1 AT2G02020 29.764 551 314 10 25 569 36 519 1.79e-73 245
MS.gene001159.t1 AT1G22570 30.916 524 321 12 42 550 4 501 2.69e-73 244
MS.gene001159.t1 AT4G21680 28.755 546 377 8 25 562 22 563 9.10e-72 242
MS.gene001159.t1 AT1G27040 30.450 555 360 9 25 569 16 554 1.00e-71 241
MS.gene001159.t1 AT1G27040 30.450 555 360 9 25 569 20 558 1.07e-71 241
MS.gene001159.t1 AT5G19640 28.445 566 365 11 33 595 61 589 1.36e-69 236
MS.gene001159.t1 AT1G27040 30.712 534 345 8 45 569 9 526 2.11e-69 234
MS.gene001159.t1 AT5G62730 28.393 560 363 7 24 570 49 583 4.79e-65 224
MS.gene001159.t1 AT3G25260 29.084 557 347 12 15 569 5 515 5.17e-64 219
MS.gene001159.t1 AT5G62730 28.336 547 354 7 37 570 3 524 7.52e-64 219
MS.gene001159.t1 AT1G72130 31.519 441 266 8 140 572 3 415 1.56e-61 210
MS.gene001159.t1 AT1G72130 31.519 441 266 8 140 572 3 415 1.56e-61 210
MS.gene001159.t1 AT5G14940 28.444 559 355 12 30 569 6 538 2.32e-59 207
MS.gene001159.t1 AT3G25280 25.933 563 363 14 16 569 4 521 3.22e-54 193
MS.gene001159.t1 AT3G01350 26.702 573 373 9 36 583 12 562 1.59e-51 186
MS.gene001159.t1 AT5G11570 32.127 221 142 5 34 251 16 231 9.27e-31 126
MS.gene001159.t1 AT5G11570 31.276 243 158 4 321 562 235 469 1.42e-30 125
MS.gene001159.t1 AT2G38100 24.436 532 344 16 59 575 2 490 6.09e-26 112
MS.gene001159.t1 AT2G38100 24.436 532 344 16 59 575 18 506 9.78e-26 111
MS.gene001159.t1 AT2G38100 24.436 532 344 16 59 575 24 512 1.31e-25 111

Find 137 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGTCTATGCGGACGGTTTC+TGG 0.124330 8.2:+18138807 MS.gene001159:CDS
CAATGACATCACTTTCATTT+TGG 0.133929 8.2:+18138496 MS.gene001159:CDS
ATGAACAATGTTGACAATTA+AGG 0.178336 8.2:-18138874 None:intergenic
TCAATAATCATCTTTCTATT+TGG 0.182828 8.2:+18138033 MS.gene001159:CDS
TAATGAGTCATTTGAGAAAT+TGG 0.224444 8.2:+18136575 MS.gene001159:CDS
TAATGAGGATAATCAATAAA+AGG 0.244344 8.2:+18138550 MS.gene001159:CDS
AATTAGAGAGCTTCTTTAAT+TGG 0.245054 8.2:+18137896 MS.gene001159:CDS
CAGCTAGGAGTTCTATTTAC+AGG 0.245288 8.2:+18137775 MS.gene001159:CDS
CTTTGCTGCTGTTGCTATAA+TGG 0.251616 8.2:+18138761 MS.gene001159:CDS
CCTTGCCACTTATCAAATAA+TGG 0.254228 8.2:-18139031 None:intergenic
TTATTGATTATCCTCATTAT+AGG 0.258228 8.2:-18138546 None:intergenic
ACTCCTAGCTGCCAATCTTT+TGG 0.277033 8.2:-18137763 None:intergenic
CCATTGGTGCTGGTGGAATT+AGG 0.281293 8.2:+18137812 MS.gene001159:CDS
TGGTTAATGTGGTGCAAATT+TGG 0.285525 8.2:+18136667 MS.gene001159:CDS
TTCATTTCTGATACTTATCT+TGG 0.291357 8.2:+18136726 MS.gene001159:CDS
ACTAATGTAAGCTGGACTTT+AGG 0.309412 8.2:+18137979 MS.gene001159:CDS
TCTCCATCCTCCTGCTTCTC+TGG 0.322425 8.2:-18136422 None:intergenic
ATACTTATCTTGGCCGGTTC+CGG 0.323101 8.2:+18136736 MS.gene001159:CDS
GGAGTTCTATTTACAGGTCT+TGG 0.337419 8.2:+18137781 MS.gene001159:CDS
CTGGATGAAGCTTCATTAGA+TGG 0.345535 8.2:-18136403 None:intergenic
ATACAAACTGATAGGTCTAT+TGG 0.348540 8.2:+18138432 MS.gene001159:CDS
TGTTTGGAATTCTACCAGTA+TGG 0.351509 8.2:+18138346 MS.gene001159:CDS
GAACACTTGAAATGCTTGTT+TGG 0.353749 8.2:+18138330 MS.gene001159:CDS
TGGTTGTATTGCATCACTTC+TGG 0.357555 8.2:+18136770 MS.gene001159:CDS
CGGTTCCGGACCCTCCTATA+TGG 0.362580 8.2:+18136750 MS.gene001159:CDS
TGTCAGAATCAGAAAACATT+AGG 0.363031 8.2:+18138187 MS.gene001159:CDS
TTGCTGTGTTGGTGTCAAAT+TGG 0.373081 8.2:-18137861 None:intergenic
CATAAAGCAACATCACATAA+AGG 0.375246 8.2:+18138894 MS.gene001159:CDS
ATGGATCAGCAGAGCACATT+TGG 0.375422 8.2:+18138396 MS.gene001159:CDS
TTTGTTTCGCCCGTGAGCTT+TGG 0.377058 8.2:+18138696 MS.gene001159:CDS
ATCATTATCATCACAGGTAA+TGG 0.377106 8.2:-18137722 None:intergenic
CAGGTTCAAGTTTCTTGATA+AGG 0.377319 8.2:+18138224 MS.gene001159:CDS
AGGCCTTGCAACATTGCATT+TGG 0.382877 8.2:+18137832 MS.gene001159:CDS
CCTTGGTTGTTCAATTCACT+TGG 0.383589 8.2:-18138264 None:intergenic
CAAATTCCTGTCACCCATAC+TGG 0.392266 8.2:-18138360 None:intergenic
AATTTGTTGTTTCGTTGTAA+TGG 0.392711 8.2:+18138377 MS.gene001159:CDS
ATGGGATGCAGAATCAGAAT+TGG 0.395520 8.2:+18138591 MS.gene001159:CDS
TTGCCGCAGTTTGCATTGTC+AGG 0.400086 8.2:+18138726 MS.gene001159:CDS
ATGGCAATGCCTCATGTTCT+AGG 0.403384 8.2:-18136384 None:intergenic
GTTGTTCAATTCACTTGGTT+CGG 0.416383 8.2:-18138259 None:intergenic
GCTTGCCATTATTTGATAAG+TGG 0.417301 8.2:+18139026 MS.gene001159:CDS
TATTATTTAATTGCTTCCAT+TGG 0.430317 8.2:+18138972 MS.gene001159:CDS
TCAAACATTGCATCATTAGT+TGG 0.432144 8.2:+18136699 MS.gene001159:CDS
AACCATTCTTAGCAATTCCT+TGG 0.434183 8.2:-18138281 None:intergenic
TGTTCTAGGTCGAGTGTAGA+AGG 0.441355 8.2:-18136370 None:intergenic
CATATAGGAGGGTCCGGAAC+CGG 0.441581 8.2:-18136749 None:intergenic
TTAGGCTTGTTCAGACAAAC+AGG 0.442906 8.2:+18138205 MS.gene001159:CDS
TCATTATCATCACAGGTAAT+GGG 0.445502 8.2:-18137721 None:intergenic
ATTGTCAACATCCAAAAGAT+TGG 0.446015 8.2:+18137752 MS.gene001159:CDS
GCTGAGGTGCAACCAATTGC+TGG 0.447890 8.2:+18139065 MS.gene001159:CDS
CATCCAAAAGATTGGCAGCT+AGG 0.450802 8.2:+18137760 MS.gene001159:CDS
GCACTTGTTATTGTGCTCAC+TGG 0.451716 8.2:+18137940 MS.gene001159:CDS
TCTCTGTTCACACCAGCAAT+TGG 0.452312 8.2:-18139077 None:intergenic
GTCTATTGGATCTCACTTCA+AGG 0.458738 8.2:+18138446 MS.gene001159:CDS
ATAAAGCAACATCACATAAA+GGG 0.462265 8.2:+18138895 MS.gene001159:CDS
AACTAATGATGCAATGTTTG+AGG 0.462398 8.2:-18136697 None:intergenic
TTTGACACCAACACAGCAAA+AGG 0.467559 8.2:+18137865 MS.gene001159:CDS
CAACCTGAGTGGAATATTTG+TGG 0.471616 8.2:+18136647 MS.gene001159:CDS
AATGAGGATAATCAATAAAA+GGG 0.479132 8.2:+18138551 MS.gene001159:CDS
TTGTCCATTGCAAACTACTC+TGG 0.481684 8.2:+18138849 MS.gene001159:CDS
TAGAGAGCTTCTTTAATTGG+TGG 0.485786 8.2:+18137899 MS.gene001159:CDS
GTGATGCAATACAACCATAT+AGG 0.488324 8.2:-18136764 None:intergenic
ATTCTTTACCTTGCAAGTGC+CGG 0.491743 8.2:+18138785 MS.gene001159:CDS
GGACTATTATCCATTGGTGC+TGG 0.494849 8.2:+18137802 MS.gene001159:CDS
AGATCTGTTAAATATATCAT+TGG 0.495983 8.2:+18136442 MS.gene001159:CDS
TACAACCATATAGGAGGGTC+CGG 0.500785 8.2:-18136755 None:intergenic
CATTATAGCAACAGCAGCAA+AGG 0.502153 8.2:-18138760 None:intergenic
GAAGCTTCATCCAGAGAAGC+AGG 0.505889 8.2:+18136412 MS.gene001159:CDS
CAAAAGCAAACCAAAGCTCA+CGG 0.506453 8.2:-18138706 None:intergenic
GTCAAGATTTAAATCATACT+AGG 0.509763 8.2:+18138937 MS.gene001159:CDS
TGGGATGCAGAATCAGAATT+GGG 0.510086 8.2:+18138592 MS.gene001159:CDS
CCTAATTCCACCAGCACCAA+TGG 0.510559 8.2:-18137812 None:intergenic
ATATTCAAACTAATGTAAGC+TGG 0.511736 8.2:+18137971 MS.gene001159:CDS
AAAGGGAAAACACCTTGGTT+AGG 0.511814 8.2:+18138912 MS.gene001159:CDS
TGAGAAGAAGCGTCGTGACT+CGG 0.512337 8.2:+18138656 MS.gene001159:CDS
ATTCTACCAGTATGGGTGAC+AGG 0.516346 8.2:+18138354 MS.gene001159:CDS
AACCAAGGAATTGCTAAGAA+TGG 0.517462 8.2:+18138279 MS.gene001159:CDS
GTTATCTATCCTATGTATGT+TGG 0.519802 8.2:+18138620 MS.gene001159:CDS
TACATTTACAAGAAACCTCA+AGG 0.527921 8.2:+18138066 MS.gene001159:CDS
ACTTTGTAGTTTGCAACAAG+TGG 0.530470 8.2:+18138308 MS.gene001159:CDS
TGGAATATTTGTGGTTAATG+TGG 0.535275 8.2:+18136656 MS.gene001159:CDS
GATAAAATTCAAAACTCCAA+TGG 0.535291 8.2:-18138988 None:intergenic
AAAAGCAAACCAAAGCTCAC+GGG 0.536417 8.2:-18138705 None:intergenic
AAGGAATTGCTAAGAATGGT+TGG 0.537199 8.2:+18138283 MS.gene001159:CDS
GGTCTTGGACTATTATCCAT+TGG 0.538384 8.2:+18137796 MS.gene001159:CDS
CTATTATCCATTGGTGCTGG+TGG 0.538784 8.2:+18137805 MS.gene001159:CDS
CATAGACTCCGGCACTTGCA+AGG 0.539862 8.2:-18138793 None:intergenic
GTTTGGAATTCTACCAGTAT+GGG 0.540324 8.2:+18138347 MS.gene001159:CDS
CCATTATTTGATAAGTGGCA+AGG 0.544169 8.2:+18139031 MS.gene001159:CDS
TCTCACTTCAAGGTTCCACC+AGG 0.546207 8.2:+18138456 MS.gene001159:CDS
TTTCTGATACTTATCTTGGC+CGG 0.550033 8.2:+18136730 MS.gene001159:CDS
CATCCAGAGAAGCAGGAGGA+TGG 0.553260 8.2:+18136419 MS.gene001159:CDS
AGGTCTATCATTATCATCAC+AGG 0.553890 8.2:-18137728 None:intergenic
GGCTACAAGAAGAATGAGCA+TGG 0.556808 8.2:+18138572 MS.gene001159:CDS
GTATCTACCTTCCTATAATG+AGG 0.561820 8.2:+18138535 MS.gene001159:CDS
AATGTGGTGCAAATTTGGAA+TGG 0.564294 8.2:+18136672 MS.gene001159:CDS
ACACCAACACAGCAAAAGGA+AGG 0.566907 8.2:+18137869 MS.gene001159:CDS
ATGCAATACAACCATATAGG+AGG 0.569522 8.2:-18136761 None:intergenic
GGAACCAGAGTAGTTTGCAA+TGG 0.569691 8.2:-18138853 None:intergenic
TGAACAAGATGATGAGGAGA+AGG 0.569754 8.2:+18139106 MS.gene001159:CDS
CACATAAAGGGAAAACACCT+TGG 0.572816 8.2:+18138907 MS.gene001159:CDS
CTGCAGCTACCAACATACAT+AGG 0.573320 8.2:-18138629 None:intergenic
GGGAAAACACCTTGGTTAGG+TGG 0.573815 8.2:+18138915 MS.gene001159:CDS
GCACCAAATGCAATGTTGCA+AGG 0.574065 8.2:-18137835 None:intergenic
ACCAACACAGCAAAAGGAAG+GGG 0.574079 8.2:+18137871 MS.gene001159:CDS
TATACCAGCTGTTAATGTCA+TGG 0.582000 8.2:-18137686 None:intergenic
CACCAACACAGCAAAAGGAA+GGG 0.586077 8.2:+18137870 MS.gene001159:CDS
TTCAAGTTATACAAACTGAT+AGG 0.597569 8.2:+18138424 MS.gene001159:CDS
GTTCAAGTTTCTTGATAAGG+CGG 0.599661 8.2:+18138227 MS.gene001159:CDS
TTTAGGATTTGCAATTCCAA+CGG 0.600267 8.2:+18137996 MS.gene001159:CDS
TGATTATCCTCATTATAGGA+AGG 0.600926 8.2:-18138542 None:intergenic
ATCACATGAACAAGATGATG+AGG 0.603566 8.2:+18139100 MS.gene001159:CDS
ATGACCATGACATTAACAGC+TGG 0.609508 8.2:+18137682 MS.gene001159:CDS
GAGAAAGCAAGACAAACCGT+TGG 0.628071 8.2:-18138012 None:intergenic
GAGCACAATAACAAGTGCAA+TGG 0.632899 8.2:-18137935 None:intergenic
ATCAAGTTCATCCACCCTGG+TGG 0.633435 8.2:-18138471 None:intergenic
TCTTGTAAATGTAAGTGTCG+CGG 0.634152 8.2:-18138056 None:intergenic
TGCAAGTGCCGGAGTCTATG+CGG 0.636741 8.2:+18138796 MS.gene001159:CDS
GAAACCGTCCGCATAGACTC+CGG 0.637954 8.2:-18138804 None:intergenic
TAACCACAAATATTCCACTC+AGG 0.639567 8.2:-18136650 None:intergenic
AGGGAGCGTCTTTACAGACA+TGG 0.644390 8.2:+18138086 MS.gene001159:CDS
TACACTCGACCTAGAACATG+AGG 0.646610 8.2:+18136375 MS.gene001159:CDS
TGCAATACAACCATATAGGA+GGG 0.648217 8.2:-18136760 None:intergenic
CGTCTTTACAGACATGGCAA+AGG 0.652076 8.2:+18138092 MS.gene001159:CDS
GCTACAAGAAGAATGAGCAT+GGG 0.656063 8.2:+18138573 MS.gene001159:CDS
GATATCAAGTTCATCCACCC+TGG 0.659106 8.2:-18138474 None:intergenic
CCAAGTGAATTGAACAACCA+AGG 0.659947 8.2:+18138264 MS.gene001159:CDS
AGTGCCGGAGTCTATGCGGA+CGG 0.664385 8.2:+18138800 MS.gene001159:CDS
ACTTCAAGGTTCCACCAGGG+TGG 0.665016 8.2:+18138460 MS.gene001159:CDS
AAATCTTGACCACCTAACCA+AGG 0.667278 8.2:-18138924 None:intergenic
ACATTTACAAGAAACCTCAA+GGG 0.677570 8.2:+18138067 MS.gene001159:CDS
CTAACAAAATACAACCTGAG+TGG 0.686497 8.2:+18136636 MS.gene001159:CDS
AAACCTGACAATGCAAACTG+CGG 0.687628 8.2:-18138729 None:intergenic
CAAGGAAATTGAGAAAGCTG+AGG 0.699712 8.2:+18139049 MS.gene001159:CDS
TCTGTAAAGACGCTCCCTTG+AGG 0.700830 8.2:-18138081 None:intergenic
GCTTCATCCAGAGAAGCAGG+AGG 0.716276 8.2:+18136415 MS.gene001159:CDS
CTCACTTCAAGGTTCCACCA+GGG 0.729774 8.2:+18138457 MS.gene001159:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTATTTTTTTTATTA+AGG + chr8.2:18136552-18136571 MS.gene001159:intron 0.0%
!!! AAATGATATGTTTTATTAAG+TGG + chr8.2:18136944-18136963 MS.gene001159:intron 15.0%
!! AATGAGGATAATCAATAAAA+GGG + chr8.2:18138551-18138570 MS.gene001159:CDS 20.0%
!! AGATCTGTTAAATATATCAT+TGG + chr8.2:18136442-18136461 MS.gene001159:CDS 20.0%
!! CATAACTAACTTATTAACAT+GGG + chr8.2:18137475-18137494 MS.gene001159:intron 20.0%
!! TAATGAGGATAATCAATAAA+AGG + chr8.2:18138550-18138569 MS.gene001159:CDS 20.0%
!! TATTATTTAATTGCTTCCAT+TGG + chr8.2:18138972-18138991 MS.gene001159:CDS 20.0%
!! TCAATAATCATCTTTCTATT+TGG + chr8.2:18138033-18138052 MS.gene001159:CDS 20.0%
!! TCATAACTAACTTATTAACA+TGG + chr8.2:18137474-18137493 MS.gene001159:intron 20.0%
!! TTATATTGGATGGTTATTAT+AGG + chr8.2:18137509-18137528 MS.gene001159:intron 20.0%
!!! TTATTGATTATCCTCATTAT+AGG - chr8.2:18138549-18138568 None:intergenic 20.0%
! AAAAGAATCAATCAAAACCT+TGG - chr8.2:18137576-18137595 None:intergenic 25.0%
! AACATGCACTACATATAAAT+AGG + chr8.2:18137386-18137405 MS.gene001159:intron 25.0%
! AATTAGAGAGCTTCTTTAAT+TGG + chr8.2:18137896-18137915 MS.gene001159:CDS 25.0%
! ATAAAGCAACATCACATAAA+GGG + chr8.2:18138895-18138914 MS.gene001159:CDS 25.0%
! ATATTCAAACTAATGTAAGC+TGG + chr8.2:18137971-18137990 MS.gene001159:CDS 25.0%
! ATGAACAATGTTGACAATTA+AGG - chr8.2:18138877-18138896 None:intergenic 25.0%
! CATGATTTCTTAACATTGTT+TGG + chr8.2:18136519-18136538 MS.gene001159:intron 25.0%
! GATAAAATTCAAAACTCCAA+TGG - chr8.2:18138991-18139010 None:intergenic 25.0%
! GTCAAGATTTAAATCATACT+AGG + chr8.2:18138937-18138956 MS.gene001159:CDS 25.0%
! GTTCATCAATTTATATTGGA+TGG + chr8.2:18137499-18137518 MS.gene001159:intron 25.0%
! TAATGAGTCATTTGAGAAAT+TGG + chr8.2:18136575-18136594 MS.gene001159:CDS 25.0%
! TGAATAAATACATGTATGCA+TGG - chr8.2:18136857-18136876 None:intergenic 25.0%
! TTCATTTCTGATACTTATCT+TGG + chr8.2:18136726-18136745 MS.gene001159:CDS 25.0%
!! TTCAAGTTATACAAACTGAT+AGG + chr8.2:18138424-18138443 MS.gene001159:CDS 25.0%
!!! AATTTGTTGTTTCGTTGTAA+TGG + chr8.2:18138377-18138396 MS.gene001159:CDS 25.0%
AACTAATGATGCAATGTTTG+AGG - chr8.2:18136700-18136719 None:intergenic 30.0%
ACATAGTAATAGGTACATGT+GGG - chr8.2:18136904-18136923 None:intergenic 30.0%
ACATTTACAAGAAACCTCAA+GGG + chr8.2:18138067-18138086 MS.gene001159:CDS 30.0%
ATACAAACTGATAGGTCTAT+TGG + chr8.2:18138432-18138451 MS.gene001159:CDS 30.0%
ATCATTATCATCACAGGTAA+TGG - chr8.2:18137725-18137744 None:intergenic 30.0%
ATTGTCAACATCCAAAAGAT+TGG + chr8.2:18137752-18137771 MS.gene001159:CDS 30.0%
CATAAAGCAACATCACATAA+AGG + chr8.2:18138894-18138913 MS.gene001159:CDS 30.0%
CTGTTTCAAGACATAGTAAT+AGG - chr8.2:18136914-18136933 None:intergenic 30.0%
GATATAAACATAACCAAGCT+TGG + chr8.2:18137639-18137658 MS.gene001159:intron 30.0%
GGGAGTTCATCAATTTATAT+TGG + chr8.2:18137495-18137514 MS.gene001159:intron 30.0%
GTTATCTATCCTATGTATGT+TGG + chr8.2:18138620-18138639 MS.gene001159:CDS 30.0%
TACATTTACAAGAAACCTCA+AGG + chr8.2:18138066-18138085 MS.gene001159:CDS 30.0%
TCAAACATTGCATCATTAGT+TGG + chr8.2:18136699-18136718 MS.gene001159:CDS 30.0%
TCATTATCATCACAGGTAAT+GGG - chr8.2:18137724-18137743 None:intergenic 30.0%
TGACTCATTAAGTAGATGTT+TGG + chr8.2:18137247-18137266 MS.gene001159:intron 30.0%
TGATTATCCTCATTATAGGA+AGG - chr8.2:18138545-18138564 None:intergenic 30.0%
TGGAATATTTGTGGTTAATG+TGG + chr8.2:18136656-18136675 MS.gene001159:CDS 30.0%
TGTCAGAATCAGAAAACATT+AGG + chr8.2:18138187-18138206 MS.gene001159:CDS 30.0%
! AAAGTGAGTCAATGTGATTT+TGG + chr8.2:18137294-18137313 MS.gene001159:intron 30.0%
! CAATGACATCACTTTCATTT+TGG + chr8.2:18138496-18138515 MS.gene001159:CDS 30.0%
! TCTTTTGGATGTTGACAATT+AGG - chr8.2:18137751-18137770 None:intergenic 30.0%
! TTTAGGATTTGCAATTCCAA+CGG + chr8.2:18137996-18138015 MS.gene001159:CDS 30.0%
AACCAAGGAATTGCTAAGAA+TGG + chr8.2:18138279-18138298 MS.gene001159:CDS 35.0%
AACCATTCTTAGCAATTCCT+TGG - chr8.2:18138284-18138303 None:intergenic 35.0%
AAGGAATTGCTAAGAATGGT+TGG + chr8.2:18138283-18138302 MS.gene001159:CDS 35.0%
AATGTGGTGCAAATTTGGAA+TGG + chr8.2:18136672-18136691 MS.gene001159:CDS 35.0%
ACTAATGTAAGCTGGACTTT+AGG + chr8.2:18137979-18137998 MS.gene001159:CDS 35.0%
AGGTCTATCATTATCATCAC+AGG - chr8.2:18137731-18137750 None:intergenic 35.0%
ATCACATGAACAAGATGATG+AGG + chr8.2:18139100-18139119 MS.gene001159:CDS 35.0%
ATGCAATACAACCATATAGG+AGG - chr8.2:18136764-18136783 None:intergenic 35.0%
CCATTATTTGATAAGTGGCA+AGG + chr8.2:18139031-18139050 MS.gene001159:CDS 35.0%
CTAACAAAATACAACCTGAG+TGG + chr8.2:18136636-18136655 MS.gene001159:CDS 35.0%
GAACACTTGAAATGCTTGTT+TGG + chr8.2:18138330-18138349 MS.gene001159:CDS 35.0%
GACATAGTAATAGGTACATG+TGG - chr8.2:18136905-18136924 None:intergenic 35.0%
GCTTGCCATTATTTGATAAG+TGG + chr8.2:18139026-18139045 MS.gene001159:CDS 35.0%
GTATCTACCTTCCTATAATG+AGG + chr8.2:18138535-18138554 MS.gene001159:CDS 35.0%
GTGATGCAATACAACCATAT+AGG - chr8.2:18136767-18136786 None:intergenic 35.0%
GTTGTTCAATTCACTTGGTT+CGG - chr8.2:18138262-18138281 None:intergenic 35.0%
TAACCACAAATATTCCACTC+AGG - chr8.2:18136653-18136672 None:intergenic 35.0%
TAGAGAGCTTCTTTAATTGG+TGG + chr8.2:18137899-18137918 MS.gene001159:CDS 35.0%
TATACCAGCTGTTAATGTCA+TGG - chr8.2:18137689-18137708 None:intergenic 35.0%
TGCAATACAACCATATAGGA+GGG - chr8.2:18136763-18136782 None:intergenic 35.0%
TGGTTAATGTGGTGCAAATT+TGG + chr8.2:18136667-18136686 MS.gene001159:CDS 35.0%
TGTCATATACAAACCAAGCT+TGG - chr8.2:18137655-18137674 None:intergenic 35.0%
TTTCTGATACTTATCTTGGC+CGG + chr8.2:18136730-18136749 MS.gene001159:CDS 35.0%
! ACTTTGTAGTTTGCAACAAG+TGG + chr8.2:18138308-18138327 MS.gene001159:CDS 35.0%
! CAGGTTCAAGTTTCTTGATA+AGG + chr8.2:18138224-18138243 MS.gene001159:CDS 35.0%
! CCTTGCCACTTATCAAATAA+TGG - chr8.2:18139034-18139053 None:intergenic 35.0%
! GTTCAAGTTTCTTGATAAGG+CGG + chr8.2:18138227-18138246 MS.gene001159:CDS 35.0%
! GTTTGGAATTCTACCAGTAT+GGG + chr8.2:18138347-18138366 MS.gene001159:CDS 35.0%
! TCTTGTAAATGTAAGTGTCG+CGG - chr8.2:18138059-18138078 None:intergenic 35.0%
! TGTTTGGAATTCTACCAGTA+TGG + chr8.2:18138346-18138365 MS.gene001159:CDS 35.0%
! TTTTGGCAAAAGCTACACTT+TGG + chr8.2:18137311-18137330 MS.gene001159:intron 35.0%
!! AAGCTTGGTTTGTATATGAC+AGG + chr8.2:18137654-18137673 MS.gene001159:intron 35.0%
!! AGCTTGGTTTGTATATGACA+GGG + chr8.2:18137655-18137674 MS.gene001159:intron 35.0%
!! GACACTGATTCTTAGACAAA+GGG + chr8.2:18137216-18137235 MS.gene001159:intron 35.0%
!! TGACACTGATTCTTAGACAA+AGG + chr8.2:18137215-18137234 MS.gene001159:intron 35.0%
!!! GAGAAGGTTTTAGACATAGT+AGG + chr8.2:18139122-18139141 MS.gene001159:CDS 35.0%
AAAAGCAAACCAAAGCTCAC+GGG - chr8.2:18138708-18138727 None:intergenic 40.0%
AAACCTGACAATGCAAACTG+CGG - chr8.2:18138732-18138751 None:intergenic 40.0%
AAAGGGAAAACACCTTGGTT+AGG + chr8.2:18138912-18138931 MS.gene001159:CDS 40.0%
AAATCTTGACCACCTAACCA+AGG - chr8.2:18138927-18138946 None:intergenic 40.0%
AGCTAGCAAGCATTATACCA+AGG + chr8.2:18137556-18137575 MS.gene001159:intron 40.0%
ATGACCATGACATTAACAGC+TGG + chr8.2:18137682-18137701 MS.gene001159:CDS 40.0%
ATGGGATGCAGAATCAGAAT+TGG + chr8.2:18138591-18138610 MS.gene001159:CDS 40.0%
ATTCTTTACCTTGCAAGTGC+CGG + chr8.2:18138785-18138804 MS.gene001159:CDS 40.0%
CAAAAGCAAACCAAAGCTCA+CGG - chr8.2:18138709-18138728 None:intergenic 40.0%
CAACCTGAGTGGAATATTTG+TGG + chr8.2:18136647-18136666 MS.gene001159:CDS 40.0%
CAAGGAAATTGAGAAAGCTG+AGG + chr8.2:18139049-18139068 MS.gene001159:CDS 40.0%
CACATAAAGGGAAAACACCT+TGG + chr8.2:18138907-18138926 MS.gene001159:CDS 40.0%
CAGCTAGGAGTTCTATTTAC+AGG + chr8.2:18137775-18137794 MS.gene001159:CDS 40.0%
CATTATAGCAACAGCAGCAA+AGG - chr8.2:18138763-18138782 None:intergenic 40.0%
CCAAGTGAATTGAACAACCA+AGG + chr8.2:18138264-18138283 MS.gene001159:CDS 40.0%
CCTTGGTTGTTCAATTCACT+TGG - chr8.2:18138267-18138286 None:intergenic 40.0%
CTGGATGAAGCTTCATTAGA+TGG - chr8.2:18136406-18136425 None:intergenic 40.0%
CTTTGCTGCTGTTGCTATAA+TGG + chr8.2:18138761-18138780 MS.gene001159:CDS 40.0%
GAGCACAATAACAAGTGCAA+TGG - chr8.2:18137938-18137957 None:intergenic 40.0%
GCTACAAGAAGAATGAGCAT+GGG + chr8.2:18138573-18138592 MS.gene001159:CDS 40.0%
GGACAAGCTCAAAAAGAAGA+TGG - chr8.2:18138835-18138854 None:intergenic 40.0%
GGAGTTCTATTTACAGGTCT+TGG + chr8.2:18137781-18137800 MS.gene001159:CDS 40.0%
GGTCTTGGACTATTATCCAT+TGG + chr8.2:18137796-18137815 MS.gene001159:CDS 40.0%
GTAGTGCATGTTTATGATCG+CGG - chr8.2:18137378-18137397 None:intergenic 40.0%
GTCTATTGGATCTCACTTCA+AGG + chr8.2:18138446-18138465 MS.gene001159:CDS 40.0%
TGAACAAGATGATGAGGAGA+AGG + chr8.2:18139106-18139125 MS.gene001159:CDS 40.0%
TGGGATGCAGAATCAGAATT+GGG + chr8.2:18138592-18138611 MS.gene001159:CDS 40.0%
TGGTTGTATTGCATCACTTC+TGG + chr8.2:18136770-18136789 MS.gene001159:CDS 40.0%
TTGTCCATTGCAAACTACTC+TGG + chr8.2:18138849-18138868 MS.gene001159:CDS 40.0%
TTTGACACCAACACAGCAAA+AGG + chr8.2:18137865-18137884 MS.gene001159:CDS 40.0%
! TTAGGCTTGTTCAGACAAAC+AGG + chr8.2:18138205-18138224 MS.gene001159:CDS 40.0%
!! TTGCTGTGTTGGTGTCAAAT+TGG - chr8.2:18137864-18137883 None:intergenic 40.0%
AACAAAATCACGGTGGTCTG+CGG - chr8.2:18137350-18137369 None:intergenic 45.0%
ACACCAACACAGCAAAAGGA+AGG + chr8.2:18137869-18137888 MS.gene001159:CDS 45.0%
ACCAACACAGCAAAAGGAAG+GGG + chr8.2:18137871-18137890 MS.gene001159:CDS 45.0%
AGGCCTTGCAACATTGCATT+TGG + chr8.2:18137832-18137851 MS.gene001159:CDS 45.0%
ATGGATCAGCAGAGCACATT+TGG + chr8.2:18138396-18138415 MS.gene001159:CDS 45.0%
ATGGCAATGCCTCATGTTCT+AGG - chr8.2:18136387-18136406 None:intergenic 45.0%
ATTCTACCAGTATGGGTGAC+AGG + chr8.2:18138354-18138373 MS.gene001159:CDS 45.0%
CAAATTCCTGTCACCCATAC+TGG - chr8.2:18138363-18138382 None:intergenic 45.0%
CACCAACACAGCAAAAGGAA+GGG + chr8.2:18137870-18137889 MS.gene001159:CDS 45.0%
CATCCAAAAGATTGGCAGCT+AGG + chr8.2:18137760-18137779 MS.gene001159:CDS 45.0%
CGCGGTAACCAACAAAATCA+CGG - chr8.2:18137360-18137379 None:intergenic 45.0%
CGTCTTTACAGACATGGCAA+AGG + chr8.2:18138092-18138111 MS.gene001159:CDS 45.0%
CTGCAGCTACCAACATACAT+AGG - chr8.2:18138632-18138651 None:intergenic 45.0%
GAGAAAGCAAGACAAACCGT+TGG - chr8.2:18138015-18138034 None:intergenic 45.0%
GATATCAAGTTCATCCACCC+TGG - chr8.2:18138477-18138496 None:intergenic 45.0%
GCACCAAATGCAATGTTGCA+AGG - chr8.2:18137838-18137857 None:intergenic 45.0%
GGACTATTATCCATTGGTGC+TGG + chr8.2:18137802-18137821 MS.gene001159:CDS 45.0%
GGCTACAAGAAGAATGAGCA+TGG + chr8.2:18138572-18138591 MS.gene001159:CDS 45.0%
GGTAACCAACAAAATCACGG+TGG - chr8.2:18137357-18137376 None:intergenic 45.0%
TACAACCATATAGGAGGGTC+CGG - chr8.2:18136758-18136777 None:intergenic 45.0%
TACACTCGACCTAGAACATG+AGG + chr8.2:18136375-18136394 MS.gene001159:CDS 45.0%
TCTCTGTTCACACCAGCAAT+TGG - chr8.2:18139080-18139099 None:intergenic 45.0%
! ACTCCTAGCTGCCAATCTTT+TGG - chr8.2:18137766-18137785 None:intergenic 45.0%
! ATACTTATCTTGGCCGGTTC+CGG + chr8.2:18136736-18136755 MS.gene001159:CDS 45.0%
! GGAACCAGAGTAGTTTGCAA+TGG - chr8.2:18138856-18138875 None:intergenic 45.0%
! TGTTCTAGGTCGAGTGTAGA+AGG - chr8.2:18136373-18136392 None:intergenic 45.0%
!! CTATTATCCATTGGTGCTGG+TGG + chr8.2:18137805-18137824 MS.gene001159:CDS 45.0%
!! GCACTTGTTATTGTGCTCAC+TGG + chr8.2:18137940-18137959 MS.gene001159:CDS 45.0%
ATCAAGTTCATCCACCCTGG+TGG - chr8.2:18138474-18138493 None:intergenic 50.0%
CCTAATTCCACCAGCACCAA+TGG - chr8.2:18137815-18137834 None:intergenic 50.0%
CTCACTTCAAGGTTCCACCA+GGG + chr8.2:18138457-18138476 MS.gene001159:CDS 50.0%
GAAGCTTCATCCAGAGAAGC+AGG + chr8.2:18136412-18136431 MS.gene001159:CDS 50.0%
GGGAAAACACCTTGGTTAGG+TGG + chr8.2:18138915-18138934 MS.gene001159:CDS 50.0%
TCTCACTTCAAGGTTCCACC+AGG + chr8.2:18138456-18138475 MS.gene001159:CDS 50.0%
TCTGTAAAGACGCTCCCTTG+AGG - chr8.2:18138084-18138103 None:intergenic 50.0%
TTGCCGCAGTTTGCATTGTC+AGG + chr8.2:18138726-18138745 MS.gene001159:CDS 50.0%
TTTGTTTCGCCCGTGAGCTT+TGG + chr8.2:18138696-18138715 MS.gene001159:CDS 50.0%
! GCAGACCACCGTGATTTTGT+TGG + chr8.2:18137349-18137368 MS.gene001159:intron 50.0%
!! AGGGAGCGTCTTTACAGACA+TGG + chr8.2:18138086-18138105 MS.gene001159:CDS 50.0%
!! CCATTGGTGCTGGTGGAATT+AGG + chr8.2:18137812-18137831 MS.gene001159:CDS 50.0%
!! TCCCCTTCCTTTTGCTGTGT+TGG - chr8.2:18137875-18137894 None:intergenic 50.0%
!! TGAGAAGAAGCGTCGTGACT+CGG + chr8.2:18138656-18138675 MS.gene001159:CDS 50.0%
ACTTCAAGGTTCCACCAGGG+TGG + chr8.2:18138460-18138479 MS.gene001159:CDS 55.0%
CATAGACTCCGGCACTTGCA+AGG - chr8.2:18138796-18138815 None:intergenic 55.0%
CATATAGGAGGGTCCGGAAC+CGG - chr8.2:18136752-18136771 None:intergenic 55.0%
CATCCAGAGAAGCAGGAGGA+TGG + chr8.2:18136419-18136438 MS.gene001159:CDS 55.0%
GAAACCGTCCGCATAGACTC+CGG - chr8.2:18138807-18138826 None:intergenic 55.0%
GAGTCTATGCGGACGGTTTC+TGG + chr8.2:18138807-18138826 MS.gene001159:CDS 55.0%
GCTGAGGTGCAACCAATTGC+TGG + chr8.2:18139065-18139084 MS.gene001159:CDS 55.0%
GCTTCATCCAGAGAAGCAGG+AGG + chr8.2:18136415-18136434 MS.gene001159:CDS 55.0%
TCTCCATCCTCCTGCTTCTC+TGG - chr8.2:18136425-18136444 None:intergenic 55.0%
!! TGCAAGTGCCGGAGTCTATG+CGG + chr8.2:18138796-18138815 MS.gene001159:CDS 55.0%
CGGTTCCGGACCCTCCTATA+TGG + chr8.2:18136750-18136769 MS.gene001159:CDS 60.0%
! AGTGCCGGAGTCTATGCGGA+CGG + chr8.2:18138800-18138819 MS.gene001159:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 18136337 18139154 18136337 ID=MS.gene001159
chr8.2 mRNA 18136337 18139154 18136337 ID=MS.gene001159.t1;Parent=MS.gene001159
chr8.2 exon 18136337 18136463 18136337 ID=MS.gene001159.t1.exon1;Parent=MS.gene001159.t1
chr8.2 CDS 18136337 18136463 18136337 ID=cds.MS.gene001159.t1;Parent=MS.gene001159.t1
chr8.2 exon 18136574 18136791 18136574 ID=MS.gene001159.t1.exon2;Parent=MS.gene001159.t1
chr8.2 CDS 18136574 18136791 18136574 ID=cds.MS.gene001159.t1;Parent=MS.gene001159.t1
chr8.2 exon 18137676 18139154 18137676 ID=MS.gene001159.t1.exon3;Parent=MS.gene001159.t1
chr8.2 CDS 18137676 18139154 18137676 ID=cds.MS.gene001159.t1;Parent=MS.gene001159.t1
Gene Sequence

>MS.gene001159

ATGGAGGAGAATGTTGTGAACACAAATTCTTCTCCTTCTACACTCGACCTAGAACATGAGGCATTGCCATCTAATGAAGCTTCATCCAGAGAAGCAGGAGGATGGAGATCTGTTAAATATATCATTGGTAAATATGTTTTCTACATTAATTAATTATAATCATTAATGTTGTTACAAGCATGCATGATTTCTTAACATTGTTTGGTTTTTATTAAATTTTTTATTTTTTTTATTAAGGTAATGAGTCATTTGAGAAATTGGCATCGATGAGTTTGATATCAAATCTAACAGTGTATCTTCTAACAAAATACAACCTGAGTGGAATATTTGTGGTTAATGTGGTGCAAATTTGGAATGGATCCTCAAACATTGCATCATTAGTTGGTGCTTTCATTTCTGATACTTATCTTGGCCGGTTCCGGACCCTCCTATATGGTTGTATTGCATCACTTCTGGTAATTTTTTGCATCTGACTCTTTATTTTCATTTTTGTTCTTCTTCATTAATTAACAATTTGCCATGCATACATGTATTTATTCATTATCATTTTTTCATTCTTGAATTCCCACATGTACCTATTACTATGTCTTGAAACAGAAATAAAGAAAAATGATATGTTTTATTAAGTGGTTTATACATATTTCTTACAAAAACTATTGAGTGTACTAATTTTTATGAGATAATGAAATTTATTTACTAAAGAACTCTTATTAATGATATTAGTGAAATTTATCGAAAAAGAGAGACTATATTAGTAGAAGAAAGTAATTAATAATTCAATGTTGTTGTTGTTATTATTATTATCATTATTATTTGTTACATACTTGAATGATATTCTGAAACAACAAATAATATGACAAAAGCAAATTTTTCATGTGTGACACTGATTCTTAGACAAAGGGAGTAGTAGTGACTCATTAAGTAGATGTTTGGATTGACATTGAGTTAAATAGAATCAAAGTGAGTCAATGTGATTTTGGCAAAAGCTACACTTTGGAGCTTCAAGAAAACCGCAGACCACCGTGATTTTGTTGGTTACCGCGATCATAAACATGCACTACATATAAATAGGAAGTTGTAACTAATGTAATCATAACTGACTAATTAACATGTCAGTTTCATCAATTTATATTGTAATCATAACTAACTTATTAACATGGGAGTTCATCAATTTATATTGGATGGTTATTATAGGAATCATATGTTAATACTGTGATTGAGCTAGCAAGCATTATACCAAGGTTTTGATTGATTCTTTTATTTATTCACTTGATTTTTTATTTAACATGTAAGAATGCACATGATATAAACATAACCAAGCTTGGTTTGTATATGACAGGGTATAATGACCATGACATTAACAGCTGGTATACATCAATTAAGACCCATTACCTGTGATGATAATGATAGACCTAATTGTCAACATCCAAAAGATTGGCAGCTAGGAGTTCTATTTACAGGTCTTGGACTATTATCCATTGGTGCTGGTGGAATTAGGCCTTGCAACATTGCATTTGGTGCTGACCAATTTGACACCAACACAGCAAAAGGAAGGGGACAATTAGAGAGCTTCTTTAATTGGTGGTATTTCACTTTCACCATTGCACTTGTTATTGTGCTCACTGGTGTTGTCTATATTCAAACTAATGTAAGCTGGACTTTAGGATTTGCAATTCCAACGGTTTGTCTTGCTTTCTCAATAATCATCTTTCTATTTGGCCGCGACACTTACATTTACAAGAAACCTCAAGGGAGCGTCTTTACAGACATGGCAAAGGTGATCGTTGCAGCATGTCGAAAACGCAAACTTCAGCTTTCAAATAGAACTTTATATGATCATGTTTCTACATTGTCAGAATCAGAAAACATTAGGCTTGTTCAGACAAACAGGTTCAAGTTTCTTGATAAGGCGGCTATAATAGCCGAACCAAGTGAATTGAACAACCAAGGAATTGCTAAGAATGGTTGGAGACTTTGTAGTTTGCAACAAGTGGAACACTTGAAATGCTTGTTTGGAATTCTACCAGTATGGGTGACAGGAATTTGTTGTTTCGTTGTAATGGATCAGCAGAGCACATTTGGTGTGCTTCAAGTTATACAAACTGATAGGTCTATTGGATCTCACTTCAAGGTTCCACCAGGGTGGATGAACTTGATATCAATGACATCACTTTCATTTTGGATATGCATTTATGAGTGTATCTACCTTCCTATAATGAGGATAATCAATAAAAGGGCTACAAGAAGAATGAGCATGGGATGCAGAATCAGAATTGGGATATTGTTATCTATCCTATGTATGTTGGTAGCTGCAGTTGTTGAGAAGAAGCGTCGTGACTCGGCTTTGAAACATAACTCGTTTGTTTCGCCCGTGAGCTTTGGTTTGCTTTTGCCGCAGTTTGCATTGTCAGGTTTAAATGAAGCCTTTGCTGCTGTTGCTATAATGGAATTCTTTACCTTGCAAGTGCCGGAGTCTATGCGGACGGTTTCTGGTGCCATCTTCTTTTTGAGCTTGTCCATTGCAAACTACTCTGGTTCCTTAATTGTCAACATTGTTCATAAAGCAACATCACATAAAGGGAAAACACCTTGGTTAGGTGGTCAAGATTTAAATCATACTAGGCTTGATTACTATTATTATTTAATTGCTTCCATTGGAGTTTTGAATTTTATCTATTTCAATTTCTTTGCTTGCCATTATTTGATAAGTGGCAAGGAAATTGAGAAAGCTGAGGTGCAACCAATTGCTGGTGTGAACAGAGAATCACATGAACAAGATGATGAGGAGAAGGTTTTAGACATAGTAGGCACTAGATGA
Protein sequence

>MS.gene001159.t1

MEENVVNTNSSPSTLDLEHEALPSNEASSREAGGWRSVKYIIGNESFEKLASMSLISNLTVYLLTKYNLSGIFVVNVVQIWNGSSNIASLVGAFISDTYLGRFRTLLYGCIASLLGIMTMTLTAGIHQLRPITCDDNDRPNCQHPKDWQLGVLFTGLGLLSIGAGGIRPCNIAFGADQFDTNTAKGRGQLESFFNWWYFTFTIALVIVLTGVVYIQTNVSWTLGFAIPTVCLAFSIIIFLFGRDTYIYKKPQGSVFTDMAKVIVAACRKRKLQLSNRTLYDHVSTLSESENIRLVQTNRFKFLDKAAIIAEPSELNNQGIAKNGWRLCSLQQVEHLKCLFGILPVWVTGICCFVVMDQQSTFGVLQVIQTDRSIGSHFKVPPGWMNLISMTSLSFWICIYECIYLPIMRIINKRATRRMSMGCRIRIGILLSILCMLVAAVVEKKRRDSALKHNSFVSPVSFGLLLPQFALSGLNEAFAAVAIMEFFTLQVPESMRTVSGAIFFLSLSIANYSGSLIVNIVHKATSHKGKTPWLGGQDLNHTRLDYYYYLIASIGVLNFIYFNFFACHYLISGKEIEKAEVQPIAGVNRESHEQDDEEKVLDIVGTR