Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001729.t1 | XP_024640583.1 | 98.8 | 1059 | 13 | 0 | 1 | 1059 | 1 | 1059 | 0.00E+00 | 2046.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001729.t1 | Q8WTW3 | 23.9 | 992 | 616 | 26 | 25 | 957 | 16 | 927 | 3.3e-54 | 215.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001729.t1 | A0A396JZ67 | 98.8 | 1059 | 13 | 0 | 1 | 1059 | 1 | 1059 | 0.0e+00 | 2046.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024389 | MS.gene001729 | PPI |
| MS.gene22749 | MS.gene001729 | PPI |
| MS.gene050696 | MS.gene001729 | PPI |
| MS.gene001729 | MS.gene001540 | PPI |
| MS.gene001729 | MS.gene025857 | PPI |
| MS.gene22747 | MS.gene001729 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001729.t1 | MTR_1g492710 | 98.483 | 791 | 12 | 0 | 1 | 791 | 1 | 791 | 0.0 | 1608 |
| MS.gene001729.t1 | MTR_1g492710 | 95.062 | 162 | 8 | 0 | 783 | 944 | 930 | 1091 | 5.99e-92 | 318 |
| MS.gene001729.t1 | MTR_1g492720 | 100.000 | 59 | 0 | 0 | 945 | 1003 | 16 | 74 | 1.41e-31 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001729.t1 | AT5G16300 | 62.500 | 1080 | 372 | 14 | 1 | 1059 | 1 | 1068 | 0.0 | 1321 |
| MS.gene001729.t1 | AT5G16300 | 60.890 | 1079 | 357 | 13 | 1 | 1059 | 1 | 1034 | 0.0 | 1276 |
| MS.gene001729.t1 | AT5G16300 | 60.223 | 1076 | 365 | 14 | 5 | 1059 | 2 | 1035 | 0.0 | 1252 |
| MS.gene001729.t1 | AT5G16300 | 61.561 | 1025 | 367 | 13 | 1 | 1004 | 1 | 1019 | 0.0 | 1240 |
Find 265 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGGTGTTGGACTTGTTTC+TGG | 0.129159 | 1.3:+64293675 | MS.gene001729:intron |
| TTGATACGCCGGAGAATATT+TGG | 0.133282 | 1.3:+64292758 | MS.gene001729:CDS |
| TACTTGGTTCTCCCAGATTT+TGG | 0.137160 | 1.3:+64294829 | MS.gene001729:CDS |
| CTCTGGTGGCGATTCAAATT+TGG | 0.140474 | 1.3:+64297877 | MS.gene001729:CDS |
| CAATCATTGACTTGAGATTT+AGG | 0.165545 | 1.3:+64294283 | MS.gene001729:CDS |
| TCTTGTCTTAATGCCTATTT+TGG | 0.191178 | 1.3:+64294498 | MS.gene001729:CDS |
| TAAACTTGCATCAAGGTTAT+TGG | 0.209158 | 1.3:+64296922 | MS.gene001729:CDS |
| TTAAGGTTTGTTTGTCTTCC+TGG | 0.233821 | 1.3:-64294939 | None:intergenic |
| TCTAGGTTGGAAGCAGGTTT+GGG | 0.249144 | 1.3:+64299935 | MS.gene001729:intron |
| TTCTAGGTTGGAAGCAGGTT+TGG | 0.258849 | 1.3:+64299934 | MS.gene001729:intron |
| TGGAAGATGATTCTGATCTT+TGG | 0.258991 | 1.3:+64294220 | MS.gene001729:CDS |
| AAACAAACCTTAACTCTAAA+AGG | 0.259558 | 1.3:+64294949 | MS.gene001729:CDS |
| ACTTACTTCAGGACCAAAAT+AGG | 0.266675 | 1.3:-64294511 | None:intergenic |
| TAACATTTACTTTGCAGATA+TGG | 0.267231 | 1.3:-64294636 | None:intergenic |
| TATTCAATTCTTCCAATTCA+TGG | 0.270315 | 1.3:-64295022 | None:intergenic |
| GTGCTAGATCCCTCAGTCTT+TGG | 0.274785 | 1.3:-64294614 | None:intergenic |
| ATTCCCACTGGCCCAAAATC+TGG | 0.279074 | 1.3:-64294841 | None:intergenic |
| GACTGAAATTCACTTTCTTC+AGG | 0.282420 | 1.3:-64294477 | None:intergenic |
| GTATATGTTTAGAATGGTTT+TGG | 0.284554 | 1.3:-64294800 | None:intergenic |
| TGCTAGATCCCTCAGTCTTT+GGG | 0.291204 | 1.3:-64294613 | None:intergenic |
| TTGGGAATGGAGTTTGGTTC+GGG | 0.295422 | 1.3:-64292689 | None:intergenic |
| TCTGCCACAGCAGCCTTGTT+TGG | 0.296679 | 1.3:+64294981 | MS.gene001729:CDS |
| GCTCATCAAGTGACAGAAAA+AGG | 0.297837 | 1.3:+64297809 | MS.gene001729:CDS |
| AATCATTGACTTGAGATTTA+GGG | 0.303397 | 1.3:+64294284 | MS.gene001729:CDS |
| CTGTTTACGGGTTGAGGATT+CGG | 0.308969 | 1.3:-64292497 | None:intergenic |
| CTAGTGAAACATTCTCGTTT+TGG | 0.316077 | 1.3:+64294891 | MS.gene001729:CDS |
| TAGGATTCGGGAACTCGTTT+TGG | 0.320530 | 1.3:+64294200 | MS.gene001729:CDS |
| CAAAGCTTAACTTCCTCTTC+AGG | 0.325723 | 1.3:-64293919 | None:intergenic |
| CTCTCATTCTCCCAGAGATA+TGG | 0.340747 | 1.3:-64298324 | None:intergenic |
| CCTACAACTTATGGATACTA+TGG | 0.344473 | 1.3:+64295072 | MS.gene001729:CDS |
| GATGGGGTGAATGTCTTCTT+TGG | 0.353422 | 1.3:-64299405 | None:intergenic |
| TGATACGCCGGAGAATATTT+GGG | 0.353456 | 1.3:+64292759 | MS.gene001729:CDS |
| CTAAGAGAAGACTTTGCCTT+TGG | 0.354459 | 1.3:-64297920 | None:intergenic |
| AATGCGGTGGTCGTCGGCGT+GGG | 0.355766 | 1.3:-64292407 | None:intergenic |
| TCGGGATTGGGAATGGAGTT+TGG | 0.356270 | 1.3:-64292695 | None:intergenic |
| CCACCAGCTTCACAATTGTT+TGG | 0.359106 | 1.3:+64293883 | MS.gene001729:CDS |
| TTCTGTCTTGTGTGATGTGT+TGG | 0.362077 | 1.3:+64293768 | MS.gene001729:CDS |
| CAAACACCGCCTGCTGTATA+AGG | 0.362242 | 1.3:-64294399 | None:intergenic |
| GTATTAGAGCCTACAACTTA+TGG | 0.363762 | 1.3:+64295063 | MS.gene001729:CDS |
| GGAAGATGATTCTGATCTTT+GGG | 0.364524 | 1.3:+64294221 | MS.gene001729:CDS |
| GTCGTGGATATCGCAAGTTT+TGG | 0.367262 | 1.3:+64293708 | MS.gene001729:CDS |
| TCGAATCTCGGCGATGGGTT+TGG | 0.372072 | 1.3:-64292470 | None:intergenic |
| AGTTGCCTTGGAGTAGGATT+CGG | 0.376951 | 1.3:+64294187 | MS.gene001729:CDS |
| GCCTTAACTTTGAGCACGCC+TGG | 0.378141 | 1.3:+64295146 | MS.gene001729:CDS |
| CTTATACAGCAGGCGGTGTT+TGG | 0.379413 | 1.3:+64294400 | MS.gene001729:CDS |
| TCCCTGATTCGACTTACTTC+AGG | 0.380422 | 1.3:-64294522 | None:intergenic |
| TTAACTTCCTCTTCAGGATT+GGG | 0.381330 | 1.3:-64293913 | None:intergenic |
| CAAGAATGACTTTGTAGAAA+AGG | 0.383535 | 1.3:-64293855 | None:intergenic |
| GTCCTGAAGTAAGTCGAATC+AGG | 0.384077 | 1.3:+64294520 | MS.gene001729:CDS |
| ATTGGGAATGGAGTTTGGTT+CGG | 0.384204 | 1.3:-64292690 | None:intergenic |
| CTTAACTTCCTCTTCAGGAT+TGG | 0.385326 | 1.3:-64293914 | None:intergenic |
| AGAAGATGCAAGCCATGAAT+TGG | 0.386596 | 1.3:+64295010 | MS.gene001729:CDS |
| TGGATGACAGCTCAAGTCTT+GGG | 0.386894 | 1.3:+64299499 | MS.gene001729:CDS |
| GTGGCGATTCAAATTTGGTT+GGG | 0.388856 | 1.3:+64297882 | MS.gene001729:CDS |
| GGGTCATCATCAATCTGATC+TGG | 0.389500 | 1.3:-64300097 | None:intergenic |
| CTTCCGCGGAGAAATCAATA+AGG | 0.394324 | 1.3:+64294091 | MS.gene001729:CDS |
| GTATTAGATTCTGAATTAGT+AGG | 0.398427 | 1.3:-64298429 | None:intergenic |
| CTCAGTCTTTGGGAGGCCTT+CGG | 0.399852 | 1.3:-64294603 | None:intergenic |
| GTTGCCTTGGAGTAGGATTC+GGG | 0.401004 | 1.3:+64294188 | MS.gene001729:CDS |
| AAGAATGACTTTGTAGAAAA+GGG | 0.403222 | 1.3:-64293854 | None:intergenic |
| AAATCTCTTCAAGAAGTTCA+TGG | 0.404740 | 1.3:+64299436 | MS.gene001729:CDS |
| CTGAAGAGGAAGTTAAGCTT+TGG | 0.406834 | 1.3:+64293920 | MS.gene001729:CDS |
| TAAGAGAAGACTTTGCCTTT+GGG | 0.409198 | 1.3:-64297919 | None:intergenic |
| TTTGTCATTGATGTTCTCTC+TGG | 0.410244 | 1.3:+64297860 | MS.gene001729:CDS |
| TGATGTGTTGGGAATCATTC+AGG | 0.411058 | 1.3:+64293780 | MS.gene001729:CDS |
| GGAAAGTAAACAAGTTCTAC+AGG | 0.414373 | 1.3:+64294122 | MS.gene001729:CDS |
| AGATAAGCTGGAATCGGTTA+TGG | 0.414553 | 1.3:+64293954 | MS.gene001729:CDS |
| GCAGCGGCTATGTCCACATT+TGG | 0.416741 | 1.3:+64300024 | MS.gene001729:CDS |
| CTGATTAGACCGTTCTCTAA+TGG | 0.417724 | 1.3:-64297975 | None:intergenic |
| GTTCCCGCTGCCGGAGAGGA+TGG | 0.418700 | 1.3:-64292382 | None:intergenic |
| TCCATTCCCAATCCCGAGCC+TGG | 0.421161 | 1.3:+64292701 | MS.gene001729:CDS |
| AAGCTCCTGGCCACTGCCAA+TGG | 0.422355 | 1.3:-64294067 | None:intergenic |
| CCATAGTATCCATAAGTTGT+AGG | 0.423408 | 1.3:-64295072 | None:intergenic |
| TCTTTCTCAAAAGATAAATC+TGG | 0.424373 | 1.3:+64299479 | MS.gene001729:CDS |
| GAAGAGATTTCATTTGAAGA+TGG | 0.424725 | 1.3:-64299423 | None:intergenic |
| GTCGATCTGTTTACGGGTTG+AGG | 0.425080 | 1.3:-64292503 | None:intergenic |
| TGCATCAAGGTTATTGGAAA+AGG | 0.425874 | 1.3:+64296928 | MS.gene001729:CDS |
| GACCACCGCATTTCCACTTC+CGG | 0.425926 | 1.3:+64292418 | MS.gene001729:CDS |
| GCCTTTCTTTCCACTGAAGT+GGG | 0.425997 | 1.3:+64297782 | MS.gene001729:CDS |
| GTAAGTCCAGGCTCGGGATT+GGG | 0.427588 | 1.3:-64292707 | None:intergenic |
| CATCTGAACATCATTCTGTT+TGG | 0.427866 | 1.3:-64294364 | None:intergenic |
| CCCAGGCGTGCTCAAAGTTA+AGG | 0.428583 | 1.3:-64295147 | None:intergenic |
| ACTGAAATTCACTTTCTTCA+GGG | 0.430090 | 1.3:-64294476 | None:intergenic |
| TCTGTCTTGTGTGATGTGTT+GGG | 0.432407 | 1.3:+64293769 | MS.gene001729:CDS |
| TTTGGTTCGGGATTGAGATT+CGG | 0.432821 | 1.3:-64292677 | None:intergenic |
| AAAGGTATGAACCATATCTC+TGG | 0.433620 | 1.3:+64298313 | MS.gene001729:intron |
| GGGAATCATTCAGGTCACTC+TGG | 0.435233 | 1.3:+64293789 | MS.gene001729:CDS |
| TTTGTCGTCGATCTGTTTAC+GGG | 0.435378 | 1.3:-64292509 | None:intergenic |
| CAATCCCGAGCCTGGACTTA+CGG | 0.438237 | 1.3:+64292709 | MS.gene001729:CDS |
| ATCAGACTGATCTTGCTTGA+CGG | 0.443865 | 1.3:-64296771 | None:intergenic |
| GCTTGCTGCTATTGTCTCTC+AGG | 0.444950 | 1.3:+64295106 | MS.gene001729:CDS |
| AAACATATACCCTTGATACT+TGG | 0.448713 | 1.3:+64294813 | MS.gene001729:CDS |
| TCATGGAATTCAATTACAAA+TGG | 0.449641 | 1.3:+64299453 | MS.gene001729:CDS |
| CGTAAGTCCAGGCTCGGGAT+TGG | 0.451443 | 1.3:-64292708 | None:intergenic |
| GGATTCGGTGTTTCGAATCT+CGG | 0.452411 | 1.3:-64292482 | None:intergenic |
| GAAGAATTGAATAAGACTAT+AGG | 0.452669 | 1.3:+64295032 | MS.gene001729:CDS |
| TTTGGATTCTGATGAGGGTA+AGG | 0.452923 | 1.3:+64292858 | MS.gene001729:CDS |
| GTCCCATCCTCTCCGGCAGC+GGG | 0.454699 | 1.3:+64292379 | MS.gene001729:CDS |
| AAGAGATTTCATTTGAAGAT+GGG | 0.456289 | 1.3:-64299422 | None:intergenic |
| AGAAATTTAATTGATGCCAT+TGG | 0.456984 | 1.3:+64294051 | MS.gene001729:CDS |
| TGCATCGCGGTAGCCGGAAG+TGG | 0.461378 | 1.3:-64292431 | None:intergenic |
| CAGCTTCACAATTGTTTGGC+GGG | 0.462106 | 1.3:+64293887 | MS.gene001729:CDS |
| TGGCTGAGATTGTCAAACTT+TGG | 0.462256 | 1.3:-64297955 | None:intergenic |
| TCAAGGGTATATGTTTAGAA+TGG | 0.463200 | 1.3:-64294806 | None:intergenic |
| GGTTTAAATACCTCCCCATC+AGG | 0.463246 | 1.3:+64298475 | MS.gene001729:CDS |
| TGAGGGTAAGGTTAAGATCT+TGG | 0.463258 | 1.3:+64292870 | MS.gene001729:CDS |
| AGAAGACCAGCTGCCTGAGC+AGG | 0.465139 | 1.3:-64300057 | None:intergenic |
| CTGGATGACAGCTCAAGTCT+TGG | 0.465347 | 1.3:+64299498 | MS.gene001729:CDS |
| GGCCTTTCTTTCCACTGAAG+TGG | 0.465406 | 1.3:+64297781 | MS.gene001729:CDS |
| TGGAGATATTCTACCTGCTC+AGG | 0.465773 | 1.3:+64300044 | MS.gene001729:CDS |
| GCGTGGGGTGTTCCCGCTGC+CGG | 0.466673 | 1.3:-64292391 | None:intergenic |
| TCAGGTCACTCTGGGTCAGG+TGG | 0.469957 | 1.3:+64293798 | MS.gene001729:CDS |
| GATCTGAGATTGAGTTGCCT+TGG | 0.470997 | 1.3:+64294175 | MS.gene001729:CDS |
| GGTCTAATCAGTTGTTAAAC+CGG | 0.471854 | 1.3:+64297987 | MS.gene001729:CDS |
| AAACCGGCTTTCTCAGAGAC+TGG | 0.473732 | 1.3:+64298003 | MS.gene001729:CDS |
| TCAGATCTCGCAGCGGAGTC+GGG | 0.474276 | 1.3:+64292945 | MS.gene001729:CDS |
| TGATGGGGAGGTATTTAAAC+CGG | 0.475659 | 1.3:-64298473 | None:intergenic |
| TCTCCGCGGAAGCAAGCTCC+TGG | 0.476685 | 1.3:-64294080 | None:intergenic |
| ACAGGTGGTTGGAATCTTTG+AGG | 0.478209 | 1.3:+64297760 | MS.gene001729:intron |
| ACTTACGTAAGCCAGTCTAT+AGG | 0.479011 | 1.3:-64298028 | None:intergenic |
| ATTCTACCTGCTCAGGCAGC+TGG | 0.479804 | 1.3:+64300051 | MS.gene001729:CDS |
| GTCTTCTCTTAGAAGAAAGC+AGG | 0.480005 | 1.3:+64297931 | MS.gene001729:CDS |
| GTGTTTCGAATCTCGGCGAT+GGG | 0.482849 | 1.3:-64292475 | None:intergenic |
| CATTCAGGTCACTCTGGGTC+AGG | 0.483438 | 1.3:+64293795 | MS.gene001729:CDS |
| TTAATTGATGCCATTGGCAG+TGG | 0.486951 | 1.3:+64294057 | MS.gene001729:CDS |
| TTCCCACTGGCCCAAAATCT+GGG | 0.488521 | 1.3:-64294840 | None:intergenic |
| ACAAACAACATTACCTTCTC+CGG | 0.489314 | 1.3:-64293048 | None:intergenic |
| GGTGGCGATTCAAATTTGGT+TGG | 0.491145 | 1.3:+64297881 | MS.gene001729:CDS |
| AGTCCCATCCTCTCCGGCAG+CGG | 0.494366 | 1.3:+64292378 | MS.gene001729:CDS |
| GTCATTGATGTTCTCTCTGG+TGG | 0.495949 | 1.3:+64297863 | MS.gene001729:CDS |
| TCTGGGAGAACCAAGTATCA+AGG | 0.496917 | 1.3:-64294823 | None:intergenic |
| CCGCCAAACAATTGTGAAGC+TGG | 0.498037 | 1.3:-64293886 | None:intergenic |
| TTCCCGCTGCCGGAGAGGAT+GGG | 0.498120 | 1.3:-64292381 | None:intergenic |
| ATTTGGGGATGTCTTGATGA+AGG | 0.500777 | 1.3:+64292775 | MS.gene001729:CDS |
| TTCGGGATTGAGATTCGGAC+TGG | 0.502450 | 1.3:-64292672 | None:intergenic |
| AGACTCTGCATCGCGGTAGC+CGG | 0.505054 | 1.3:-64292437 | None:intergenic |
| CCAGCTTCACAATTGTTTGG+CGG | 0.505359 | 1.3:+64293886 | MS.gene001729:CDS |
| TGATGCCATTGGCAGTGGCC+AGG | 0.505848 | 1.3:+64294062 | MS.gene001729:CDS |
| CGAGAATGTTTCACTAGAGA+TGG | 0.508905 | 1.3:-64294885 | None:intergenic |
| TCCAGGCTCGGGATTGGGAA+TGG | 0.509168 | 1.3:-64292702 | None:intergenic |
| TTCCTCTTCTTCAGCATCAG+TGG | 0.509680 | 1.3:+64292899 | MS.gene001729:CDS |
| CTCAGATCTCGCAGCGGAGT+CGG | 0.511516 | 1.3:+64292944 | MS.gene001729:CDS |
| TGCTCCAAACAAGGCTGCTG+TGG | 0.512339 | 1.3:-64294985 | None:intergenic |
| AAATGCGGTGGTCGTCGGCG+TGG | 0.512764 | 1.3:-64292408 | None:intergenic |
| TGGCCAGGAGCTTGCTTCCG+CGG | 0.514245 | 1.3:+64294077 | MS.gene001729:CDS |
| ACCGCCTGCTGTATAAGGTC+TGG | 0.515915 | 1.3:-64294394 | None:intergenic |
| ACCCACTTCAGTGGAAAGAA+AGG | 0.517882 | 1.3:-64297783 | None:intergenic |
| TGGCGATTCAAATTTGGTTG+GGG | 0.518062 | 1.3:+64297883 | MS.gene001729:CDS |
| ATCTTCTCTTGCTCCAAACA+AGG | 0.518368 | 1.3:-64294994 | None:intergenic |
| AACGGTTACCGACGAGTTGA+CGG | 0.518579 | 1.3:-64292543 | None:intergenic |
| TTCTACAGGGGAGTCTAGAA+TGG | 0.519002 | 1.3:+64294136 | MS.gene001729:CDS |
| AGTGGAAATGCGGTGGTCGT+CGG | 0.519750 | 1.3:-64292413 | None:intergenic |
| ATGCGGTGGTCGTCGGCGTG+GGG | 0.521294 | 1.3:-64292406 | None:intergenic |
| CGATGAATTTCAGCCGGAGA+AGG | 0.522546 | 1.3:+64293035 | MS.gene001729:CDS |
| TGCCACTGATGCTGAAGAAG+AGG | 0.523386 | 1.3:-64292901 | None:intergenic |
| AACACAATTTCTGCAGCAGT+TGG | 0.526156 | 1.3:+64294333 | MS.gene001729:CDS |
| GGTGTTTCGAATCTCGGCGA+TGG | 0.526162 | 1.3:-64292476 | None:intergenic |
| TGAGGTGTTCTACAGTTCCC+CGG | 0.527851 | 1.3:+64298454 | MS.gene001729:CDS |
| GAAGAAGTTCATCGAGTTGG+AGG | 0.528343 | 1.3:+64296872 | MS.gene001729:CDS |
| GGCCCTCTAGAGGACAATGC+TGG | 0.528993 | 1.3:-64299384 | None:intergenic |
| GGAATCATTCAGGTCACTCT+GGG | 0.530902 | 1.3:+64293790 | MS.gene001729:CDS |
| CATGAGAGTCCCATCCTCTC+CGG | 0.531528 | 1.3:+64292372 | None:intergenic |
| AGATTGAGTTGCCTTGGAGT+AGG | 0.532804 | 1.3:+64294181 | MS.gene001729:CDS |
| CAATATCAAACTGACCTGAT+GGG | 0.532941 | 1.3:-64298489 | None:intergenic |
| AGTGGGAATGCATCTACAGT+TGG | 0.533871 | 1.3:+64294855 | MS.gene001729:CDS |
| ATGCTAACTGATGGGCAAGT+TGG | 0.535035 | 1.3:+64299982 | MS.gene001729:CDS |
| ATATAGAGAGAAGGCATAGA+CGG | 0.535269 | 1.3:-64296824 | None:intergenic |
| GTGGGAATGCATCTACAGTT+GGG | 0.536592 | 1.3:+64294856 | MS.gene001729:CDS |
| GCACGCGATGCCGTAAGTCC+AGG | 0.537198 | 1.3:-64292719 | None:intergenic |
| CGATGCCGTAAGTCCAGGCT+CGG | 0.538406 | 1.3:-64292714 | None:intergenic |
| CTTTGGGATGAGATATTTGA+GGG | 0.538918 | 1.3:+64294237 | MS.gene001729:CDS |
| CGGAGAGGATGGGACTCTCA+TGG | 0.540821 | 1.3:-64292371 | None:intergenic |
| TTTCATGTTGACGATGGAGT+CGG | 0.541804 | 1.3:-64292587 | None:intergenic |
| TGTGAAGAAGTTCATCGAGT+TGG | 0.544251 | 1.3:+64296869 | MS.gene001729:CDS |
| AACTTTGAGCACGCCTGGGA+GGG | 0.546184 | 1.3:+64295151 | MS.gene001729:CDS |
| AGAGATTTCATTTGAAGATG+GGG | 0.546216 | 1.3:-64299421 | None:intergenic |
| CCTTAACTTTGAGCACGCCT+GGG | 0.547017 | 1.3:+64295147 | MS.gene001729:CDS |
| TCTTTGGGATGAGATATTTG+AGG | 0.548135 | 1.3:+64294236 | MS.gene001729:CDS |
| TATAGAGAGAAGGCATAGAC+GGG | 0.549045 | 1.3:-64296823 | None:intergenic |
| CTGGGATCAATGCTAACTGA+TGG | 0.549686 | 1.3:+64299973 | MS.gene001729:CDS |
| AATGAGATTATATAGAGAGA+AGG | 0.550213 | 1.3:-64296833 | None:intergenic |
| GGGTGTTCCCGCTGCCGGAG+AGG | 0.553714 | 1.3:-64292386 | None:intergenic |
| TTCTGGAATCGAGGAAGTCG+TGG | 0.555193 | 1.3:+64293692 | MS.gene001729:CDS |
| AACTGTAGATGCATTCCCAC+TGG | 0.555315 | 1.3:-64294853 | None:intergenic |
| TTTCTTTCCACTGAAGTGGG+TGG | 0.557146 | 1.3:+64297785 | MS.gene001729:CDS |
| CAGGTCACTCTGGGTCAGGT+GGG | 0.557190 | 1.3:+64293799 | MS.gene001729:CDS |
| GCTCCAGCATTGTCCTCTAG+AGG | 0.560921 | 1.3:+64299381 | MS.gene001729:CDS |
| GAAATCAATAAGGGAGACAA+TGG | 0.561377 | 1.3:+64294101 | MS.gene001729:CDS |
| TTCCGCGGAGAAATCAATAA+GGG | 0.562678 | 1.3:+64294092 | MS.gene001729:CDS |
| TGTTATCGATGAATTTCAGC+CGG | 0.567099 | 1.3:+64293029 | MS.gene001729:CDS |
| AAGGTATGAACCATATCTCT+GGG | 0.568167 | 1.3:+64298314 | MS.gene001729:intron |
| GGTCATCATCAATCTGATCT+GGG | 0.568388 | 1.3:-64300096 | None:intergenic |
| TCTGCTATCTGTGATAGTCC+AGG | 0.568587 | 1.3:+64294921 | MS.gene001729:CDS |
| TCAGTCTGATGAGAACCAAT+CGG | 0.570120 | 1.3:+64296784 | MS.gene001729:CDS |
| TGTCTTCTTTGGCCCTCTAG+AGG | 0.571932 | 1.3:-64299394 | None:intergenic |
| AGACATCCCCAAATATTCTC+CGG | 0.572034 | 1.3:-64292766 | None:intergenic |
| AAAATGTCACTTACCCTCCC+AGG | 0.572386 | 1.3:-64295164 | None:intergenic |
| ATGAGCACCACCCACTTCAG+TGG | 0.574773 | 1.3:-64297792 | None:intergenic |
| AGCGGAGATTGCGGTGCATG+AGG | 0.575698 | 1.3:-64292611 | None:intergenic |
| AGAACGAATGCGATCGTGAA+CGG | 0.575714 | 1.3:-64292644 | None:intergenic |
| CGGGATCGTTTGCTTGATCG+TGG | 0.576724 | 1.3:+64292964 | MS.gene001729:CDS |
| CTGGGAGAACCAAGTATCAA+GGG | 0.578029 | 1.3:-64294822 | None:intergenic |
| TCGGGATTGAGATTCGGACT+GGG | 0.587511 | 1.3:-64292671 | None:intergenic |
| GTTAACCAGCACGGTTGATG+TGG | 0.588280 | 1.3:+64294308 | MS.gene001729:CDS |
| CATGTTGACGATGGAGTCGG+CGG | 0.589713 | 1.3:-64292584 | None:intergenic |
| TTGACCAGACCTTATACAGC+AGG | 0.590278 | 1.3:+64294390 | MS.gene001729:CDS |
| GATACGCCGGAGAATATTTG+GGG | 0.591429 | 1.3:+64292760 | MS.gene001729:CDS |
| GAAGAGCTCCGTCAACTCGT+CGG | 0.591523 | 1.3:+64292535 | MS.gene001729:CDS |
| AGTCGATGAGGTCACGGTAA+CGG | 0.591952 | 1.3:-64292561 | None:intergenic |
| TGATAGTTTATATGTCTCGA+TGG | 0.592465 | 1.3:+64294701 | MS.gene001729:CDS |
| GTTCACCACATCAACCGTGC+TGG | 0.593350 | 1.3:-64294313 | None:intergenic |
| AGAGACTGGATCCTATAGAC+TGG | 0.594900 | 1.3:+64298017 | MS.gene001729:CDS |
| TGGGATCAATGCTAACTGAT+GGG | 0.595228 | 1.3:+64299974 | MS.gene001729:CDS |
| GGATGACAGCTCAAGTCTTG+GGG | 0.597612 | 1.3:+64299500 | MS.gene001729:CDS |
| GTGAACGGCGGTGATGTTAG+CGG | 0.598642 | 1.3:-64292629 | None:intergenic |
| GATGCCGTAAGTCCAGGCTC+GGG | 0.598897 | 1.3:-64292713 | None:intergenic |
| TTATATGTCTCGATGGAAAG+TGG | 0.599105 | 1.3:+64294708 | MS.gene001729:CDS |
| CGGGATTCCCAATCCTGAAG+AGG | 0.601860 | 1.3:+64293906 | MS.gene001729:CDS |
| TCTTCTCTTAGAAGAAAGCA+GGG | 0.604861 | 1.3:+64297932 | MS.gene001729:CDS |
| CGGCGGAGTCGATGAGGTCA+CGG | 0.605056 | 1.3:-64292567 | None:intergenic |
| GATCCAGTCTCTGAGAAAGC+CGG | 0.605086 | 1.3:-64298006 | None:intergenic |
| CATATCTCTGGGAGAATGAG+AGG | 0.605460 | 1.3:+64298325 | MS.gene001729:CDS |
| CGAAGGCCTCCCAAAGACTG+AGG | 0.606469 | 1.3:+64294604 | MS.gene001729:CDS |
| TAACTTTGAGCACGCCTGGG+AGG | 0.607220 | 1.3:+64295150 | MS.gene001729:CDS |
| CTCCAGCATTGTCCTCTAGA+GGG | 0.608602 | 1.3:+64299382 | MS.gene001729:CDS |
| TCCTGAAGTAAGTCGAATCA+GGG | 0.610907 | 1.3:+64294521 | MS.gene001729:CDS |
| CAAGTATCTTGTTGATACGC+CGG | 0.611300 | 1.3:+64292747 | MS.gene001729:CDS |
| CCAAACAATTGTGAAGCTGG+TGG | 0.612633 | 1.3:-64293883 | None:intergenic |
| AAGTTTCTTAGAATCTCCGA+AGG | 0.612765 | 1.3:+64294587 | MS.gene001729:CDS |
| AATATCAAACTGACCTGATG+GGG | 0.614646 | 1.3:-64298488 | None:intergenic |
| CACAAAAGAAGAATCGTCAC+CGG | 0.618519 | 1.3:-64293743 | None:intergenic |
| GAAGGCCTCCCAAAGACTGA+GGG | 0.619317 | 1.3:+64294605 | MS.gene001729:CDS |
| CTAGGTTGGAAGCAGGTTTG+GGG | 0.621040 | 1.3:+64299936 | MS.gene001729:intron |
| GATGGGGAGGTATTTAAACC+GGG | 0.621555 | 1.3:-64298472 | None:intergenic |
| ATCAAACTGACCTGATGGGG+AGG | 0.624136 | 1.3:-64298485 | None:intergenic |
| TGGACTTGTTTCTGGAATCG+AGG | 0.625618 | 1.3:+64293683 | MS.gene001729:CDS |
| AGCCGGAAGTGGAAATGCGG+TGG | 0.627371 | 1.3:-64292420 | None:intergenic |
| AGAATGACTTTGTAGAAAAG+GGG | 0.628281 | 1.3:-64293853 | None:intergenic |
| TTCTTGTCAGAGCATCCTTG+AGG | 0.630385 | 1.3:+64294557 | MS.gene001729:CDS |
| GTTTACTTAACAGGGATGGG+AGG | 0.633012 | 1.3:+64296742 | MS.gene001729:intron |
| TAGATCCCTCAGTCTTTGGG+AGG | 0.634391 | 1.3:-64294610 | None:intergenic |
| GAAATTCACTTTCTTCAGGG+TGG | 0.634719 | 1.3:-64294473 | None:intergenic |
| GGAATTATCTAATAACCCAA+AGG | 0.640432 | 1.3:+64297904 | MS.gene001729:CDS |
| GAAAGTAAACAAGTTCTACA+GGG | 0.640980 | 1.3:+64294123 | MS.gene001729:CDS |
| TGACAGCTCAAGTCTTGGGG+TGG | 0.641795 | 1.3:+64299503 | MS.gene001729:CDS |
| ATTTAGGGAGTTAACCAGCA+CGG | 0.645100 | 1.3:+64294299 | MS.gene001729:CDS |
| AGAAACTTAACAGATCCTCA+AGG | 0.648118 | 1.3:-64294572 | None:intergenic |
| AGGTAGAATATCTCCAAATG+TGG | 0.648626 | 1.3:-64300037 | None:intergenic |
| CAATCTCAGCCATTAGAGAA+CGG | 0.648660 | 1.3:+64297966 | MS.gene001729:CDS |
| GATGGAAAGTGGTGACAAAG+AGG | 0.649981 | 1.3:+64294719 | MS.gene001729:CDS |
| AGTTCCCGAATCCTACTCCA+AGG | 0.652818 | 1.3:-64294192 | None:intergenic |
| TCTCGGCGATGGGTTTGGTG+CGG | 0.653566 | 1.3:-64292465 | None:intergenic |
| TGGAGTCGGCGGAGTCGATG+AGG | 0.661209 | 1.3:-64292573 | None:intergenic |
| TGAGGATTTCATGTTGACGA+TGG | 0.661877 | 1.3:-64292593 | None:intergenic |
| GGTGATGTTAGCGGAGATTG+CGG | 0.663510 | 1.3:-64292620 | None:intergenic |
| ACCAGACCTTATACAGCAGG+CGG | 0.668431 | 1.3:+64294393 | MS.gene001729:CDS |
| CTCCCTTATTGATTTCTCCG+CGG | 0.673803 | 1.3:-64294094 | None:intergenic |
| ATTCAGAATCTAATACTCTG+AGG | 0.683698 | 1.3:+64298436 | MS.gene001729:CDS |
| TTAGAGCTCAGATCTCGCAG+CGG | 0.695588 | 1.3:+64292938 | MS.gene001729:CDS |
| AAAGTAAACAAGTTCTACAG+GGG | 0.712947 | 1.3:+64294124 | MS.gene001729:CDS |
| ACGAATGCGATCGTGAACGG+CGG | 0.720227 | 1.3:-64292641 | None:intergenic |
| GGTAGCCGGAAGTGGAAATG+CGG | 0.722038 | 1.3:-64292423 | None:intergenic |
| TATCAACAAGATACTTGACA+CGG | 0.731031 | 1.3:-64292741 | None:intergenic |
| ATGGGGAGGTATTTAAACCG+GGG | 0.735896 | 1.3:-64298471 | None:intergenic |
| GGAAGAGAGACTCTGCATCG+CGG | 0.773308 | 1.3:-64292444 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 64292373 | 64300110 | 64292373 | ID=MS.gene001729 |
| chr1.3 | mRNA | 64292373 | 64300110 | 64292373 | ID=MS.gene001729.t1;Parent=MS.gene001729 |
| chr1.3 | exon | 64292373 | 64293056 | 64292373 | ID=MS.gene001729.t1.exon1;Parent=MS.gene001729.t1 |
| chr1.3 | CDS | 64292373 | 64293056 | 64292373 | ID=cds.MS.gene001729.t1;Parent=MS.gene001729.t1 |
| chr1.3 | exon | 64293679 | 64295172 | 64293679 | ID=MS.gene001729.t1.exon2;Parent=MS.gene001729.t1 |
| chr1.3 | CDS | 64293679 | 64295172 | 64293679 | ID=cds.MS.gene001729.t1;Parent=MS.gene001729.t1 |
| chr1.3 | exon | 64296755 | 64296949 | 64296755 | ID=MS.gene001729.t1.exon3;Parent=MS.gene001729.t1 |
| chr1.3 | CDS | 64296755 | 64296949 | 64296755 | ID=cds.MS.gene001729.t1;Parent=MS.gene001729.t1 |
| chr1.3 | exon | 64297764 | 64298044 | 64297764 | ID=MS.gene001729.t1.exon4;Parent=MS.gene001729.t1 |
| chr1.3 | CDS | 64297764 | 64298044 | 64297764 | ID=cds.MS.gene001729.t1;Parent=MS.gene001729.t1 |
| chr1.3 | exon | 64298317 | 64298496 | 64298317 | ID=MS.gene001729.t1.exon5;Parent=MS.gene001729.t1 |
| chr1.3 | CDS | 64298317 | 64298496 | 64298317 | ID=cds.MS.gene001729.t1;Parent=MS.gene001729.t1 |
| chr1.3 | exon | 64299380 | 64299554 | 64299380 | ID=MS.gene001729.t1.exon6;Parent=MS.gene001729.t1 |
| chr1.3 | CDS | 64299380 | 64299554 | 64299380 | ID=cds.MS.gene001729.t1;Parent=MS.gene001729.t1 |
| chr1.3 | exon | 64299940 | 64300110 | 64299940 | ID=MS.gene001729.t1.exon7;Parent=MS.gene001729.t1 |
| chr1.3 | CDS | 64299940 | 64300110 | 64299940 | ID=cds.MS.gene001729.t1;Parent=MS.gene001729.t1 |
| Gene Sequence |
| Protein sequence |