Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002265.t1 | XP_003593320.2 | 98.7 | 607 | 8 | 0 | 1 | 607 | 1 | 607 | 0.00E+00 | 1205.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002265.t1 | Q7XJJ7 | 65.8 | 608 | 206 | 2 | 1 | 607 | 1 | 607 | 1.3e-236 | 820.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002265.t1 | G7ISB0 | 98.7 | 607 | 8 | 0 | 1 | 607 | 1 | 607 | 0.0e+00 | 1205.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene064505 | MS.gene002265 | PPI |
MS.gene26127 | MS.gene002265 | PPI |
MS.gene002265 | MS.gene017382 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002265.t1 | MTR_2g010180 | 98.682 | 607 | 8 | 0 | 1 | 607 | 15 | 621 | 0.0 | 1241 |
MS.gene002265.t1 | MTR_2g010180 | 98.682 | 607 | 8 | 0 | 1 | 607 | 1 | 607 | 0.0 | 1241 |
MS.gene002265.t1 | MTR_2g010180 | 98.637 | 587 | 8 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1198 |
MS.gene002265.t1 | MTR_3g096980 | 43.140 | 605 | 329 | 8 | 6 | 604 | 10 | 605 | 1.06e-163 | 481 |
MS.gene002265.t1 | MTR_8g094740 | 42.787 | 610 | 337 | 7 | 3 | 607 | 7 | 609 | 7.79e-160 | 471 |
MS.gene002265.t1 | MTR_8g094740 | 41.264 | 538 | 304 | 7 | 3 | 535 | 7 | 537 | 9.55e-127 | 384 |
MS.gene002265.t1 | MTR_3g048950 | 34.234 | 444 | 245 | 11 | 179 | 588 | 90 | 520 | 9.47e-45 | 167 |
MS.gene002265.t1 | MTR_4g074030 | 26.577 | 444 | 276 | 13 | 175 | 588 | 76 | 499 | 2.66e-24 | 107 |
MS.gene002265.t1 | MTR_8g080890 | 24.847 | 491 | 306 | 11 | 130 | 588 | 42 | 501 | 1.12e-23 | 105 |
MS.gene002265.t1 | MTR_8g080880 | 24.797 | 492 | 305 | 13 | 130 | 588 | 41 | 500 | 3.61e-23 | 103 |
MS.gene002265.t1 | MTR_8g080840 | 25.203 | 492 | 303 | 12 | 130 | 588 | 41 | 500 | 2.48e-22 | 101 |
MS.gene002265.t1 | MTR_8g097220 | 26.141 | 482 | 311 | 14 | 130 | 588 | 38 | 497 | 2.59e-22 | 101 |
MS.gene002265.t1 | MTR_4g094205 | 36.158 | 177 | 109 | 2 | 195 | 370 | 72 | 245 | 5.14e-22 | 100 |
MS.gene002265.t1 | MTR_1g082750 | 36.943 | 157 | 98 | 1 | 188 | 343 | 19 | 175 | 3.05e-21 | 97.1 |
MS.gene002265.t1 | MTR_8g080870 | 25.157 | 477 | 323 | 12 | 130 | 588 | 12 | 472 | 5.22e-19 | 90.9 |
MS.gene002265.t1 | MTR_8g095600 | 28.571 | 189 | 125 | 4 | 178 | 363 | 208 | 389 | 1.14e-15 | 80.5 |
MS.gene002265.t1 | MTR_8g095600 | 28.571 | 189 | 125 | 4 | 178 | 363 | 224 | 405 | 1.83e-15 | 80.1 |
MS.gene002265.t1 | MTR_8g095600 | 28.571 | 189 | 125 | 4 | 178 | 363 | 208 | 389 | 1.84e-15 | 80.1 |
MS.gene002265.t1 | MTR_8g095600 | 28.358 | 201 | 129 | 5 | 178 | 375 | 208 | 396 | 4.10e-15 | 79.0 |
MS.gene002265.t1 | MTR_8g066660 | 80.000 | 35 | 6 | 1 | 232 | 265 | 82 | 116 | 8.97e-13 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002265.t1 | AT5G64440 | 65.789 | 608 | 206 | 2 | 1 | 607 | 1 | 607 | 0.0 | 848 |
MS.gene002265.t1 | AT3G25660 | 32.731 | 443 | 259 | 11 | 176 | 588 | 88 | 521 | 5.95e-43 | 162 |
MS.gene002265.t1 | AT5G09420 | 36.667 | 150 | 94 | 1 | 196 | 344 | 71 | 220 | 6.53e-20 | 94.4 |
MS.gene002265.t1 | AT1G08980 | 41.045 | 134 | 78 | 1 | 196 | 328 | 28 | 161 | 7.06e-20 | 92.8 |
MS.gene002265.t1 | AT5G07360 | 26.882 | 186 | 128 | 3 | 178 | 361 | 250 | 429 | 1.81e-15 | 80.5 |
MS.gene002265.t1 | AT5G07360 | 26.882 | 186 | 128 | 3 | 178 | 361 | 250 | 429 | 1.81e-15 | 80.5 |
MS.gene002265.t1 | AT4G34880 | 24.066 | 482 | 317 | 13 | 130 | 588 | 45 | 500 | 4.13e-15 | 79.0 |
MS.gene002265.t1 | AT3G17970 | 34.014 | 147 | 96 | 1 | 198 | 343 | 60 | 206 | 6.34e-14 | 75.1 |
MS.gene002265.t1 | AT3G17970 | 34.014 | 147 | 96 | 1 | 198 | 343 | 60 | 206 | 7.56e-14 | 75.1 |
MS.gene002265.t1 | AT5G07360 | 26.344 | 186 | 122 | 4 | 178 | 361 | 250 | 422 | 1.34e-12 | 71.2 |
Find 157 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACAGGTCCTTGTGTGATTC+TGG | 0.133397 | 2.3:-73073636 | MS.gene002265:intron |
AGTTGTTATACCAGAGATTT+TGG | 0.172948 | 2.3:-73071130 | MS.gene002265:CDS |
GAATAACCTTGAACAATTTC+AGG | 0.191012 | 2.3:+73077037 | None:intergenic |
CCAATAGGTTTGCAAGTAAT+TGG | 0.196360 | 2.3:-73068224 | MS.gene002265:CDS |
AAGGGCACTTGGAGGTATTC+TGG | 0.210956 | 2.3:+73069838 | None:intergenic |
ATTATGATCCTGCTAAATTA+TGG | 0.211377 | 2.3:-73076088 | MS.gene002265:CDS |
CTCCGCATTTGACTGGCTTT+TGG | 0.226279 | 2.3:-73076921 | MS.gene002265:CDS |
CGTTGTTCCAGCAAATCTTT+TGG | 0.234166 | 2.3:-73069394 | MS.gene002265:CDS |
TCACCTTGAGGTGGATATTC+AGG | 0.249639 | 2.3:+73076423 | None:intergenic |
ATTCCATCCAATATTGATAA+TGG | 0.265502 | 2.3:+73075625 | None:intergenic |
ATGTTGCAGCTCAATGTATT+AGG | 0.284658 | 2.3:-73070539 | MS.gene002265:intron |
CCAGCTGCAATTGTTGCTTC+TGG | 0.294358 | 2.3:-73074806 | MS.gene002265:CDS |
CCAATTACTTGCAAACCTAT+TGG | 0.297929 | 2.3:+73068224 | None:intergenic |
TTCATACTGATTCTATTTGC+AGG | 0.302516 | 2.3:+73072628 | None:intergenic |
TGAATGTCACATACCATAGA+TGG | 0.310578 | 2.3:+73075990 | None:intergenic |
TCTGGGACAGTGGAAGTTAT+TGG | 0.318055 | 2.3:-73073618 | MS.gene002265:CDS |
AGGAAATCCATTATCAATAT+TGG | 0.345811 | 2.3:-73075632 | MS.gene002265:CDS |
CTTTGAGATCATTAAGAATA+GGG | 0.348168 | 2.3:-73071443 | MS.gene002265:CDS |
AAGGATTATGCATTACTTCA+TGG | 0.364578 | 2.3:-73070402 | MS.gene002265:CDS |
TATACTGGTGGATCCTCTTC+AGG | 0.367952 | 2.3:-73074830 | MS.gene002265:CDS |
ACAGGAAATAATTCTAATTA+CGG | 0.369913 | 2.3:-73075352 | MS.gene002265:CDS |
ACATACCCGTCTTCAATATC+AGG | 0.370840 | 2.3:+73071051 | None:intergenic |
GTCATAGTGACTCCAACAAC+TGG | 0.380427 | 2.3:-73070359 | MS.gene002265:CDS |
TGTGACATACTACGATGTTC+TGG | 0.382706 | 2.3:-73067759 | MS.gene002265:CDS |
TTATGATCCTGCTAAATTAT+GGG | 0.383864 | 2.3:-73076087 | MS.gene002265:CDS |
CATCTGCACCCTTTCGGTAC+TGG | 0.388404 | 2.3:-73076058 | MS.gene002265:CDS |
GCAATCTATGTCATCTTTGA+TGG | 0.392919 | 2.3:+73075594 | None:intergenic |
AGCTGTGGTGTCATATTCAT+AGG | 0.394249 | 2.3:-73075409 | MS.gene002265:CDS |
TAGAAAAGTAACCCCATCTA+TGG | 0.395573 | 2.3:-73076003 | MS.gene002265:intron |
TTTGCAGCTCCGCATTTGAC+TGG | 0.396207 | 2.3:-73076928 | MS.gene002265:intron |
AGGGCACTTGGAGGTATTCT+GGG | 0.398378 | 2.3:+73069839 | None:intergenic |
ATATGATACTCGCACAAGTT+TGG | 0.399269 | 2.3:-73070592 | MS.gene002265:CDS |
GATAAAGAAGGACTTCCAAT+AGG | 0.405504 | 2.3:-73068239 | MS.gene002265:CDS |
TATCAGAGACTTCAGTTGAA+TGG | 0.410074 | 2.3:+73071321 | None:intergenic |
TAGATGCTGCTGCCTGCTTT+CGG | 0.412185 | 2.3:+73075797 | None:intergenic |
ACAGGTCCTTGTGTGATTCT+GGG | 0.412487 | 2.3:-73073635 | MS.gene002265:intron |
AAAATTCATCTGCACCCTTT+CGG | 0.413448 | 2.3:-73076064 | MS.gene002265:CDS |
AAGACAAATATGCACGAGTT+TGG | 0.417094 | 2.3:-73075385 | MS.gene002265:CDS |
GGGAGTCCCAAAAGATTTGC+TGG | 0.418915 | 2.3:+73069387 | None:intergenic |
TTTGTTGACTATGTTGAAGA+AGG | 0.420160 | 2.3:-73076851 | MS.gene002265:CDS |
GCTTTGAGATCATTAAGAAT+AGG | 0.422297 | 2.3:-73071444 | MS.gene002265:CDS |
GAAGGAAAATAAAATTGATC+AGG | 0.430407 | 2.3:-73076833 | MS.gene002265:intron |
GATCCACCAGTATACCTATC+AGG | 0.431268 | 2.3:+73074839 | None:intergenic |
TGCCATCCTCACCCGTCTAC+TGG | 0.432336 | 2.3:-73075574 | MS.gene002265:intron |
TCCTCTACCGTTGAAGCAAT+GGG | 0.433112 | 2.3:+73073594 | None:intergenic |
ACTGCCCATCTTGTTTCCAT+TGG | 0.434178 | 2.3:-73071099 | MS.gene002265:CDS |
TTAATTGAAGCTCCATTGAT+AGG | 0.434858 | 2.3:-73076880 | MS.gene002265:CDS |
GTAGGATTGAAGATAAATTA+CGG | 0.435294 | 2.3:-73074631 | MS.gene002265:CDS |
TTTAGGTATGCGGCAATGTT+GGG | 0.435375 | 2.3:-73072658 | MS.gene002265:intron |
TACGAACCTGAAATTGTTCA+AGG | 0.435654 | 2.3:-73077043 | MS.gene002265:intron |
CATGCACCTGATAGGTATAC+TGG | 0.436633 | 2.3:-73074845 | MS.gene002265:CDS |
CAGGAAATAATTCTAATTAC+GGG | 0.439620 | 2.3:-73075351 | MS.gene002265:intron |
ATTTAGGTATGCGGCAATGT+TGG | 0.440660 | 2.3:-73072659 | MS.gene002265:intron |
GTGACATACTACGATGTTCT+GGG | 0.442941 | 2.3:-73067758 | MS.gene002265:CDS |
CGCACTTACCGGGACAGAAA+TGG | 0.443679 | 2.3:+73069362 | None:intergenic |
TAGGATTGAAGATAAATTAC+GGG | 0.444516 | 2.3:-73074630 | MS.gene002265:CDS |
GGTTTAAACATGGGTTCCTC+GGG | 0.447719 | 2.3:+73076444 | None:intergenic |
AGGTTTAAACATGGGTTCCT+CGG | 0.451628 | 2.3:+73076443 | None:intergenic |
GAAATCCTCATGCACCTGAT+AGG | 0.452101 | 2.3:-73074853 | MS.gene002265:CDS |
AATCTGCTGCGGTAAATGAC+TGG | 0.461517 | 2.3:+73070562 | None:intergenic |
TTGTTGAGCTTGACGAAGAC+GGG | 0.465538 | 2.3:-73076154 | MS.gene002265:CDS |
GAGTTTGGCATGGGTACAAC+AGG | 0.465699 | 2.3:-73075370 | MS.gene002265:CDS |
ATACATGCATACCCAGTTGT+TGG | 0.471985 | 2.3:+73070347 | None:intergenic |
TCTTCCCTATGTGGTGTGGT+AGG | 0.475797 | 2.3:-73074649 | MS.gene002265:CDS |
ACCCATTGCTTCAACGGTAG+AGG | 0.481675 | 2.3:-73073595 | MS.gene002265:CDS |
TCTACTCAGAGGTTTGAATC+AGG | 0.485167 | 2.3:-73075778 | MS.gene002265:intron |
TAATTATTCAGAAACTCTGC+GGG | 0.488714 | 2.3:-73067799 | MS.gene002265:intron |
ATCCTCTACCGTTGAAGCAA+TGG | 0.489941 | 2.3:+73073593 | None:intergenic |
GGACTATGTTCTGCTGCACT+TGG | 0.490197 | 2.3:-73074785 | MS.gene002265:CDS |
CGTATTCCTTCTTCCCTATG+TGG | 0.495505 | 2.3:-73074658 | MS.gene002265:CDS |
GTTCGCATCTCCAAAATCTC+TGG | 0.505306 | 2.3:+73071120 | None:intergenic |
GCATCAAAAGATAACAATAG+TGG | 0.509099 | 2.3:+73075829 | None:intergenic |
CCTCCAAGTGCCCTTAAAAG+TGG | 0.512760 | 2.3:-73069830 | MS.gene002265:CDS |
CAATCCTACCACACCACATA+GGG | 0.513714 | 2.3:+73074645 | None:intergenic |
TGCAAGTAATTGGCCGACCA+TGG | 0.514606 | 2.3:-73068214 | MS.gene002265:CDS |
ACTCCCTGCCATTTCTGTCC+CGG | 0.516543 | 2.3:-73069370 | MS.gene002265:intron |
TATTGGACCCATTGCTTCAA+CGG | 0.522918 | 2.3:-73073601 | MS.gene002265:CDS |
GCGCATCATCTCAATTATAG+AGG | 0.524591 | 2.3:-73075878 | MS.gene002265:CDS |
CAGAGCCAATGGAAACAAGA+TGG | 0.528434 | 2.3:+73071094 | None:intergenic |
ATCTCAATTATAGAGGAGAA+TGG | 0.531095 | 2.3:-73075871 | MS.gene002265:CDS |
ATAATGTGGAAGACAGTTCA+AGG | 0.534127 | 2.3:+73076106 | None:intergenic |
GACGACAGAGTTGGCAAACA+AGG | 0.536294 | 2.3:+73071483 | None:intergenic |
CCAGAAGCAACAATTGCAGC+TGG | 0.536492 | 2.3:+73074806 | None:intergenic |
TCCTTCTTCCCTATGTGGTG+TGG | 0.537280 | 2.3:-73074653 | MS.gene002265:CDS |
ACCACACCACATAGGGAAGA+AGG | 0.538090 | 2.3:+73074652 | None:intergenic |
GCGTGTAATGGTGCCGGCGA+AGG | 0.542213 | 2.3:-73077089 | MS.gene002265:CDS |
AATCCATTATCAATATTGGA+TGG | 0.543937 | 2.3:-73075628 | MS.gene002265:CDS |
GCAAGTAATTGGCCGACCAT+GGG | 0.544819 | 2.3:-73068213 | MS.gene002265:CDS |
TCTGCTGCACTTGGTACTGA+TGG | 0.547010 | 2.3:-73074776 | MS.gene002265:CDS |
TGCTGCAGAAGTCCGAAAGC+AGG | 0.549249 | 2.3:-73075809 | MS.gene002265:CDS |
GACAAATCTACGTCCTTCGC+CGG | 0.549587 | 2.3:+73077076 | None:intergenic |
GAAACAGATATGCCGACTAC+AGG | 0.549803 | 2.3:-73069806 | MS.gene002265:intron |
GAATGTCACATACCATAGAT+GGG | 0.549812 | 2.3:+73075991 | None:intergenic |
TACGGGCGAACAAGCATGCA+GGG | 0.550171 | 2.3:-73074613 | MS.gene002265:CDS |
TCAATCCTACCACACCACAT+AGG | 0.550943 | 2.3:+73074644 | None:intergenic |
TTACGGGCGAACAAGCATGC+AGG | 0.553152 | 2.3:-73074614 | MS.gene002265:CDS |
GTTGTTGAGCTTGACGAAGA+CGG | 0.553945 | 2.3:-73076155 | MS.gene002265:CDS |
TTTCCTCAGGTTACCTCATG+CGG | 0.555175 | 2.3:-73069419 | MS.gene002265:intron |
CTGAATCCTGATATTGAAGA+CGG | 0.555687 | 2.3:-73071057 | MS.gene002265:CDS |
ACTTAAGCATTCAGAGCCAA+TGG | 0.556698 | 2.3:+73071083 | None:intergenic |
GCAGACTCAACTCTACCTTC+AGG | 0.561557 | 2.3:+73076128 | None:intergenic |
CTTGTGTGATTCTGGGACAG+TGG | 0.562726 | 2.3:-73073628 | MS.gene002265:CDS |
TACCAGTAGACGGGTGAGGA+TGG | 0.564172 | 2.3:+73075572 | None:intergenic |
AATTGCAGCTGGACCTGAAG+AGG | 0.566596 | 2.3:+73074817 | None:intergenic |
AAAATAGTAGCTTCTGCCCA+TGG | 0.567660 | 2.3:+73068197 | None:intergenic |
AAGACTTGCTTACCAGTAGA+CGG | 0.569754 | 2.3:+73075562 | None:intergenic |
AAATATGCACGAGTTTGGCA+TGG | 0.570637 | 2.3:-73075380 | MS.gene002265:CDS |
AAAGATAACAATAGTGGTGA+CGG | 0.574864 | 2.3:+73075835 | None:intergenic |
TGCTCTTAATCTGCTGACAA+AGG | 0.575420 | 2.3:-73071288 | MS.gene002265:CDS |
GCGTGTAGCAGCTGCAGTAG+AGG | 0.576619 | 2.3:-73068174 | MS.gene002265:intron |
AAATAGAATCAGTATGAAGC+CGG | 0.580983 | 2.3:-73072623 | MS.gene002265:intron |
GACGAAGACGGGAGACCTGA+AGG | 0.582768 | 2.3:-73076143 | MS.gene002265:CDS |
GCTGCACTTGGTACTGATGG+TGG | 0.585858 | 2.3:-73074773 | MS.gene002265:CDS |
AGAGCCAATGGAAACAAGAT+GGG | 0.587028 | 2.3:+73071095 | None:intergenic |
AGAACATCGTAGTATGTCAC+AGG | 0.588463 | 2.3:+73067761 | None:intergenic |
TGAGGTACGTGATGTAAAGA+TGG | 0.590401 | 2.3:-73075458 | MS.gene002265:CDS |
GGATATTCAGGTTTAAACAT+GGG | 0.591927 | 2.3:+73076435 | None:intergenic |
CTGGAACAACGAACCGCATG+AGG | 0.598017 | 2.3:+73069406 | None:intergenic |
GCTGTGGTGTCATATTCATA+GGG | 0.598801 | 2.3:-73075408 | MS.gene002265:CDS |
TGAATCCTGATATTGAAGAC+GGG | 0.601894 | 2.3:-73071056 | MS.gene002265:intron |
TGGATATTCAGGTTTAAACA+TGG | 0.605365 | 2.3:+73076434 | None:intergenic |
TCATCATCAGACGACAGAGT+TGG | 0.605407 | 2.3:+73071474 | None:intergenic |
AGACTTGCTTACCAGTAGAC+GGG | 0.606123 | 2.3:+73075563 | None:intergenic |
TGCTTACCAGTAGACGGGTG+AGG | 0.609661 | 2.3:+73075568 | None:intergenic |
AAACCTGAATATCCACCTCA+AGG | 0.614550 | 2.3:-73076426 | MS.gene002265:intron |
AATATGCACGAGTTTGGCAT+GGG | 0.615363 | 2.3:-73075379 | MS.gene002265:CDS |
TTGATGATGAACAGTTATTG+CGG | 0.622495 | 2.3:-73076479 | MS.gene002265:intron |
TAGTAGCTTCTGCCCATGGT+CGG | 0.623776 | 2.3:+73068201 | None:intergenic |
CTTACCGGGACAGAAATGGC+AGG | 0.627245 | 2.3:+73069366 | None:intergenic |
AAGAATAGGGATTTACACAC+CGG | 0.628557 | 2.3:-73071430 | MS.gene002265:intron |
TGACATACTACGATGTTCTG+GGG | 0.629045 | 2.3:-73067757 | MS.gene002265:CDS |
GTTTCAAGACTTCGTAGCTG+TGG | 0.631384 | 2.3:-73075424 | MS.gene002265:CDS |
TATAAGAAATCACCTTGAGG+TGG | 0.632445 | 2.3:+73076414 | None:intergenic |
AGCTGCAACATAATCTGCTG+CGG | 0.633134 | 2.3:+73070551 | None:intergenic |
GCACTTGGTACTGATGGTGG+AGG | 0.634647 | 2.3:-73074770 | MS.gene002265:intron |
CTAATTATTCAGAAACTCTG+CGG | 0.635675 | 2.3:-73067800 | MS.gene002265:intron |
GTGCTCATAATTTAGGTATG+CGG | 0.636761 | 2.3:-73072668 | MS.gene002265:intron |
CACTGTCCCAGAATCACACA+AGG | 0.642913 | 2.3:+73073629 | None:intergenic |
AACCAAAAGCCAGTCAAATG+CGG | 0.643609 | 2.3:+73076919 | None:intergenic |
TGAAGACAATCACCTGTAGT+CGG | 0.645553 | 2.3:+73069794 | None:intergenic |
TCATAGTGACTCCAACAACT+GGG | 0.645754 | 2.3:-73070358 | MS.gene002265:intron |
GCACCTGATAGGTATACTGG+TGG | 0.651148 | 2.3:-73074842 | MS.gene002265:CDS |
AATTTAGCAGGATCATAATG+TGG | 0.654665 | 2.3:+73076092 | None:intergenic |
TGATGGCAGGTGGATCAACA+TGG | 0.655375 | 2.3:-73075486 | MS.gene002265:intron |
GCGGAACACTGTGTTTCCCG+AGG | 0.661305 | 2.3:-73076460 | MS.gene002265:CDS |
GTATACCTATCAGGTGCATG+AGG | 0.661313 | 2.3:+73074848 | None:intergenic |
AGGCAGCAGCATCTACTCAG+AGG | 0.664025 | 2.3:-73075789 | MS.gene002265:CDS |
TAGGTGGGTTACGATAAAGA+AGG | 0.665548 | 2.3:-73068251 | MS.gene002265:CDS |
GATAACAATAGTGGTGACGG+AGG | 0.668297 | 2.3:+73075838 | None:intergenic |
GACATACTACGATGTTCTGG+GGG | 0.678417 | 2.3:-73067756 | MS.gene002265:CDS |
TTACCGGGACAGAAATGGCA+GGG | 0.679571 | 2.3:+73069367 | None:intergenic |
TGGATCAACATGGATGCATG+AGG | 0.684231 | 2.3:-73075476 | MS.gene002265:CDS |
AATCTGCTGACAAAGGCACA+TGG | 0.685458 | 2.3:-73071281 | MS.gene002265:CDS |
TGAAGTCTCTGATAAATGTG+AGG | 0.686127 | 2.3:-73071312 | MS.gene002265:CDS |
AATGTCACATACCATAGATG+GGG | 0.687753 | 2.3:+73075992 | None:intergenic |
ACGGGCGAACAAGCATGCAG+GGG | 0.697506 | 2.3:-73074612 | MS.gene002265:intron |
AATTATTCAGAAACTCTGCG+GGG | 0.779744 | 2.3:-73067798 | MS.gene002265:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 73067748 | 73077122 | 73067748 | ID=MS.gene002265 |
chr2.3 | mRNA | 73067748 | 73077122 | 73067748 | ID=MS.gene002265.t1;Parent=MS.gene002265 |
chr2.3 | exon | 73077044 | 73077122 | 73077044 | ID=MS.gene002265.t1.exon1;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73077044 | 73077122 | 73077044 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73076834 | 73076943 | 73076834 | ID=MS.gene002265.t1.exon2;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73076834 | 73076943 | 73076834 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73076427 | 73076487 | 73076427 | ID=MS.gene002265.t1.exon3;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73076427 | 73076487 | 73076427 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73076004 | 73076191 | 73076004 | ID=MS.gene002265.t1.exon4;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73076004 | 73076191 | 73076004 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73075779 | 73075908 | 73075779 | ID=MS.gene002265.t1.exon5;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73075779 | 73075908 | 73075779 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73075575 | 73075652 | 73075575 | ID=MS.gene002265.t1.exon6;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73075575 | 73075652 | 73075575 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73075352 | 73075499 | 73075352 | ID=MS.gene002265.t1.exon7;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73075352 | 73075499 | 73075352 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73074771 | 73074883 | 73074771 | ID=MS.gene002265.t1.exon8;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73074771 | 73074883 | 73074771 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73074613 | 73074688 | 73074613 | ID=MS.gene002265.t1.exon9;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73074613 | 73074688 | 73074613 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73073582 | 73073653 | 73073582 | ID=MS.gene002265.t1.exon10;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73073582 | 73073653 | 73073582 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73072624 | 73072675 | 73072624 | ID=MS.gene002265.t1.exon11;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73072624 | 73072675 | 73072624 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73071431 | 73071511 | 73071431 | ID=MS.gene002265.t1.exon12;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73071431 | 73071511 | 73071431 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73071274 | 73071357 | 73071274 | ID=MS.gene002265.t1.exon13;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73071274 | 73071357 | 73071274 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73071057 | 73071160 | 73071057 | ID=MS.gene002265.t1.exon14;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73071057 | 73071160 | 73071057 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73070540 | 73070632 | 73070540 | ID=MS.gene002265.t1.exon15;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73070540 | 73070632 | 73070540 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73070359 | 73070427 | 73070359 | ID=MS.gene002265.t1.exon16;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73070359 | 73070427 | 73070359 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73069807 | 73069871 | 73069807 | ID=MS.gene002265.t1.exon17;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73069807 | 73069871 | 73069807 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73069371 | 73069432 | 73069371 | ID=MS.gene002265.t1.exon18;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73069371 | 73069432 | 73069371 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73068175 | 73068270 | 73068175 | ID=MS.gene002265.t1.exon19;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73068175 | 73068270 | 73068175 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
chr2.3 | exon | 73067748 | 73067810 | 73067748 | ID=MS.gene002265.t1.exon20;Parent=MS.gene002265.t1 |
chr2.3 | CDS | 73067748 | 73067810 | 73067748 | ID=cds.MS.gene002265.t1;Parent=MS.gene002265.t1 |
Gene Sequence |
Protein sequence |