AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003017

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003017.t1 MTR_2g024420 99.010 303 3 0 1 303 1 303 0.0 614
MS.gene003017.t1 MTR_5g085870 63.787 301 97 7 7 302 111 404 2.78e-124 361
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003017.t1 AT4G04210 69.579 309 82 6 1 303 1 303 9.61e-138 392
MS.gene003017.t1 AT4G22150 66.343 309 91 6 1 303 1 302 1.95e-131 375
MS.gene003017.t1 AT4G15410 59.000 300 111 6 10 303 128 421 3.27e-110 326
MS.gene003017.t1 AT3G21660 48.705 193 78 5 111 303 267 438 1.39e-50 173
MS.gene003017.t1 AT3G21660 33.500 200 73 10 3 201 84 224 4.82e-12 66.6
MS.gene003017.t1 AT3G21660 44.560 193 83 4 111 303 267 435 1.71e-42 151
MS.gene003017.t1 AT3G21660 33.500 200 73 10 3 201 84 224 4.97e-12 66.6

Find 94 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGAAGCTTGGCTCCTTTC+CGG 0.204643 2.2:+61629276 None:intergenic
GTCTCATCAGCCAGAACCTT+TGG 0.275592 2.2:+61628973 None:intergenic
AAGGAGCCAAGCTTCATTTC+AGG 0.277223 2.2:-61629271 MS.gene003017:CDS
CCAAGGTCAACAAGCTTTAC+TGG 0.296001 2.2:-61630291 MS.gene003017:CDS
TCTGCAGGCTCAAGCTCCTT+GGG 0.307863 2.2:+61629737 None:intergenic
TCTCATCAGCCAGAACCTTT+GGG 0.313071 2.2:+61628974 None:intergenic
CCTCAAAGGTCCGTCATTTA+CGG 0.320498 2.2:+61630167 None:intergenic
TTCATTGATGCGTCTAGACC+TGG 0.350120 2.2:-61629036 MS.gene003017:CDS
TGACGGACCTTTGAGGAGAT+TGG 0.354213 2.2:-61630160 MS.gene003017:CDS
ATCTGCAGGCTCAAGCTCCT+TGG 0.360805 2.2:+61629736 None:intergenic
AAGGCCTCTGGATCAGCTTC+AGG 0.375933 2.2:-61630319 MS.gene003017:CDS
TTCAATCATCACCACACAAT+TGG 0.397764 2.2:-61629072 MS.gene003017:CDS
GACTATAGAGCAAGCAGGAT+TGG 0.411788 2.2:-61628947 MS.gene003017:CDS
CAGCTCCAAGTTGCCTAGCT+TGG 0.415672 2.2:+61630346 None:intergenic
TGGAACTGGCAGGTTACTCT+CGG 0.422568 2.2:-61630271 MS.gene003017:CDS
TCAACAAGCTTTACTGGAAC+TGG 0.423168 2.2:-61630285 MS.gene003017:CDS
TTCAACCAAGCTAGGCAACT+TGG 0.433347 2.2:-61630351 MS.gene003017:CDS
GTCGAGGCAACATTTGTCTC+AGG 0.447502 2.2:+61629207 None:intergenic
GTAAAGCTTGTTGACCTTGG+AGG 0.463131 2.2:+61630294 None:intergenic
GAAGGGGTTGGAGCTGAGGT+GGG 0.464702 2.2:+61629177 None:intergenic
AGAAGGGGTTGGAGCTGAGG+TGG 0.467204 2.2:+61629176 None:intergenic
AACTATCAACTTCAGATGAT+GGG 0.469653 2.2:-61629003 MS.gene003017:CDS
AGTTCTCATTCCTTCTTATG+AGG 0.470919 2.2:+61629690 None:intergenic
AAACTATCAACTTCAGATGA+TGG 0.472909 2.2:-61629004 MS.gene003017:CDS
CTGAGTTGTATTGAGGTTGA+TGG 0.475950 2.2:+61629126 None:intergenic
CCGTAAATGACGGACCTTTG+AGG 0.482107 2.2:-61630167 MS.gene003017:CDS
TCAACCACGAGACCAGTAGA+AGG 0.486622 2.2:+61629159 None:intergenic
TGGAGCTGTAGAAAGGCCTC+TGG 0.487117 2.2:-61630331 MS.gene003017:CDS
TCAGCTCCAACCCCTTCTAC+TGG 0.490883 2.2:-61629171 MS.gene003017:CDS
CCAAGCTTCATTTCAGGGAG+TGG 0.491290 2.2:-61629265 MS.gene003017:CDS
AGGAGCTTGAGCCTGCAGAT+AGG 0.491570 2.2:-61629733 MS.gene003017:CDS
CTCCAGTGGAATGCTTGTCC+AGG 0.494655 2.2:-61630406 MS.gene003017:intron
TGGAAGCAGTTCGGCTTCGA+TGG 0.495383 2.2:-61629232 MS.gene003017:CDS
CAGGGAGTGGGAAGAACACT+TGG 0.496077 2.2:-61629252 MS.gene003017:CDS
CCAGTAAAGCTTGTTGACCT+TGG 0.496881 2.2:+61630291 None:intergenic
AAGAACACTTGGAAGCAGTT+CGG 0.502793 2.2:-61629241 MS.gene003017:CDS
GGAACTGGCAGGTTACTCTC+GGG 0.505832 2.2:-61630270 MS.gene003017:CDS
TAGCGACTCCGATGGTCCTC+AGG 0.506781 2.2:-61632850 MS.gene003017:CDS
AAGGCATCAAGCAGTCGAGC+TGG 0.506928 2.2:-61632921 MS.gene003017:CDS
AGGACCATCGGAGTCGCTAT+CGG 0.507164 2.2:+61632854 None:intergenic
AGCTAGCCTGAGTTGTATTG+AGG 0.511959 2.2:+61629119 None:intergenic
TCATTGATGCGTCTAGACCT+GGG 0.516883 2.2:-61629035 MS.gene003017:CDS
CTTGTCCAGGACCCTTCAAA+AGG 0.517282 2.2:-61630393 MS.gene003017:CDS
AGGAGCCAAGCTTCATTTCA+GGG 0.517684 2.2:-61629270 MS.gene003017:CDS
CCACTCCCTGAAATGAAGCT+TGG 0.521336 2.2:+61629265 None:intergenic
TGTTGAGAGTTAGAAGCAGT+TGG 0.522165 2.2:+61630237 None:intergenic
ACTGAAATCAATGGCGTCAC+GGG 0.524471 2.2:-61632952 None:intergenic
TAAATGTAAACCTCATAAGA+AGG 0.531231 2.2:-61629700 MS.gene003017:CDS
CAAGCTTCATTTCAGGGAGT+GGG 0.535505 2.2:-61629264 MS.gene003017:CDS
GGCAACTTGGAGCTGTAGAA+AGG 0.539850 2.2:-61630338 MS.gene003017:CDS
GGGGTTGGAGCTGAGGTGGG+AGG 0.540439 2.2:+61629180 None:intergenic
AGCAGATGGTCGGTTGAGAT+CGG 0.544156 2.2:+61632881 None:intergenic
ACAGCTGACCTCCTATCTGC+AGG 0.544508 2.2:+61629722 None:intergenic
CTCATCAGCCAGAACCTTTG+GGG 0.554088 2.2:+61628975 None:intergenic
TACTGAAATCAATGGCGTCA+CGG 0.555373 2.2:-61632953 None:intergenic
AGGTCTAGACGCATCAATGA+AGG 0.558576 2.2:+61629038 None:intergenic
GTAATACTCCTGAGGACCAT+CGG 0.566845 2.2:+61632842 None:intergenic
AGTAGAAGGGGTTGGAGCTG+AGG 0.570531 2.2:+61629173 None:intergenic
ATACAACTCAGGCTAGCTGA+TGG 0.570857 2.2:-61629114 MS.gene003017:CDS
CATTGATGCGTCTAGACCTG+GGG 0.576257 2.2:-61629034 MS.gene003017:CDS
CAAGCTTTACTGGAACTGGC+AGG 0.578663 2.2:-61630281 MS.gene003017:CDS
CTGCAGGCTCAAGCTCCTTG+GGG 0.579209 2.2:+61629738 None:intergenic
CAACCACGAGACCAGTAGAA+GGG 0.582379 2.2:+61629160 None:intergenic
TGAGGTGGGAGGCGTTGTCG+AGG 0.582939 2.2:+61629191 None:intergenic
AGCTTGAGCCTGCAGATAGG+AGG 0.585887 2.2:-61629730 MS.gene003017:CDS
TATCGGAATCAGCAGATGGT+CGG 0.590803 2.2:+61632871 None:intergenic
AACCCCTTCTACTGGTCTCG+TGG 0.592080 2.2:-61629163 MS.gene003017:CDS
GGCGTCACGGGACAACAAGA+AGG 0.599291 2.2:-61632940 MS.gene003017:CDS
ACGAGACCAGTAGAAGGGGT+TGG 0.600210 2.2:+61629165 None:intergenic
CCCTTCAAAAGGAAATGATG+TGG 0.602839 2.2:-61630382 MS.gene003017:CDS
GGATCATCCAATCTCCTCAA+AGG 0.604327 2.2:+61630153 None:intergenic
TCATCAGCCAGAACCTTTGG+GGG 0.616171 2.2:+61628976 None:intergenic
ATGTTGTGAACAACAGACTC+AGG 0.616871 2.2:+61630213 None:intergenic
ATTGAAATGTGATATCAAGC+GGG 0.616914 2.2:+61629089 None:intergenic
CATCAACCTCAATACAACTC+AGG 0.620565 2.2:-61629125 MS.gene003017:CDS
ATCAGCTTCAGGAACCTCCA+AGG 0.625174 2.2:-61630308 MS.gene003017:CDS
GAACTGGCAGGTTACTCTCG+GGG 0.628067 2.2:-61630269 MS.gene003017:CDS
ACTATCAACTTCAGATGATG+GGG 0.628203 2.2:-61629002 MS.gene003017:CDS
CATAGCAACAGGAACCGGAA+AGG 0.630097 2.2:-61629290 MS.gene003017:intron
GGTTCCTGAAGCTGATCCAG+AGG 0.630507 2.2:+61630315 None:intergenic
TCGCTATCGGAATCAGCAGA+TGG 0.630862 2.2:+61632867 None:intergenic
AATGGTTTCACCGTAAATGA+CGG 0.634127 2.2:-61630177 MS.gene003017:CDS
CGCGGATGTCGCCAATTGTG+TGG 0.638335 2.2:+61629061 None:intergenic
ACACAGACTATAGAGCAAGC+AGG 0.640891 2.2:-61628952 MS.gene003017:CDS
AACTGGCAGGTTACTCTCGG+GGG 0.645658 2.2:-61630268 MS.gene003017:CDS
AACCACGAGACCAGTAGAAG+GGG 0.651448 2.2:+61629161 None:intergenic
GATTCCGATAGCGACTCCGA+TGG 0.657927 2.2:-61632858 MS.gene003017:CDS
GATTGAAATGTGATATCAAG+CGG 0.665002 2.2:+61629088 None:intergenic
TAGACGCATCAATGAAGGCG+CGG 0.675628 2.2:+61629043 None:intergenic
CCGCCGGTGTAATACTCCTG+AGG 0.683141 2.2:+61632834 None:intergenic
CCTCAGGAGTATTACACCGG+CGG 0.689148 2.2:-61632834 MS.gene003017:CDS
GGTCCTCAGGAGTATTACAC+CGG 0.689346 2.2:-61632837 MS.gene003017:CDS
CATCAGCCAGAACCTTTGGG+GGG 0.692287 2.2:+61628977 None:intergenic
ATTGATGCGTCTAGACCTGG+GGG 0.697222 2.2:-61629033 MS.gene003017:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGTTTAAAATTTTAACTA+GGG + chr2.2:61631104-61631123 None:intergenic 10.0%
!!! ATTTTTCTCAAAATTATTTT+TGG - chr2.2:61629855-61629874 MS.gene003017:intron 10.0%
!!! TATTGTTTAAAATTTTAACT+AGG + chr2.2:61631105-61631124 None:intergenic 10.0%
!!! TCAATAGTTAATAATTTTTT+TGG - chr2.2:61629250-61629269 MS.gene003017:CDS 10.0%
!!! TTTTTCTCAAAATTATTTTT+GGG - chr2.2:61629856-61629875 MS.gene003017:intron 10.0%
!! TCATGTTCTTAAATTATTAT+CGG - chr2.2:61629567-61629586 MS.gene003017:intron 15.0%
!!! AGTTTTTTTAATCTATATTC+AGG - chr2.2:61631851-61631870 MS.gene003017:intron 15.0%
!!! GTTTTTTTAATCTATATTCA+GGG - chr2.2:61631852-61631871 MS.gene003017:intron 15.0%
!!! TTATTGATTTTTAGACTTAT+GGG - chr2.2:61629130-61629149 MS.gene003017:CDS 15.0%
!!! TTTATTGATTTTTAGACTTA+TGG - chr2.2:61629129-61629148 MS.gene003017:CDS 15.0%
!! AAAATCAATAAAACACTGAA+AGG + chr2.2:61629121-61629140 None:intergenic 20.0%
!! AACAATGGTAATTAAATGAA+TGG + chr2.2:61631047-61631066 None:intergenic 20.0%
!! AATAAAGAGAAAACAAGAAA+AGG - chr2.2:61630731-61630750 MS.gene003017:intron 20.0%
!! ACTAATATAATTGCAACTAT+AGG - chr2.2:61629637-61629656 MS.gene003017:intron 20.0%
!! GATTACAATTGAAACTTATT+AGG - chr2.2:61629721-61629740 MS.gene003017:CDS 20.0%
!! TTCTTATTCTGTAAATAGTT+TGG - chr2.2:61631766-61631785 MS.gene003017:intron 20.0%
!!! AACAAAGTTTTGTTAAATGA+CGG + chr2.2:61630294-61630313 None:intergenic 20.0%
!!! ACTTGTTATTTATTGTACAT+TGG + chr2.2:61632543-61632562 None:intergenic 20.0%
!!! ATCGCTAATAAGTTTTAAAA+AGG + chr2.2:61629704-61629723 None:intergenic 20.0%
!!! TCGCTAATAAGTTTTAAAAA+GGG + chr2.2:61629703-61629722 None:intergenic 20.0%
!!! TGATTTTGTACATTAAAAGT+TGG - chr2.2:61631280-61631299 MS.gene003017:intron 20.0%
!!! TGTAAGTAAATTTTCTCTAA+TGG - chr2.2:61631925-61631944 MS.gene003017:intron 20.0%
!!! TTAAAATTTTAACTAGGGAA+TGG + chr2.2:61631099-61631118 None:intergenic 20.0%
! AAATCAAACACTTTCAGTAA+AGG + chr2.2:61631266-61631285 None:intergenic 25.0%
! AAGAGTAACATGATTTCTAT+AGG + chr2.2:61629673-61629692 None:intergenic 25.0%
! AAGATAAGAGTAAGGTAAAA+GGG + chr2.2:61629412-61629431 None:intergenic 25.0%
! ATTAAGATGTTTATCCAAAC+AGG - chr2.2:61632468-61632487 MS.gene003017:intron 25.0%
! CTAAACATCGACATATTTAT+CGG + chr2.2:61631381-61631400 None:intergenic 25.0%
! GTTTGTATTTGTCCAATTTA+GGG - chr2.2:61632223-61632242 MS.gene003017:intron 25.0%
! TAAATGTAAACCTCATAAGA+AGG - chr2.2:61632160-61632179 MS.gene003017:intron 25.0%
! TTAAAAAAACTCGATCTTCT+AGG + chr2.2:61631842-61631861 None:intergenic 25.0%
! TTAAGATGTTTATCCAAACA+GGG - chr2.2:61632469-61632488 MS.gene003017:intron 25.0%
! TTATTCTGTAAATAGTTTGG+AGG - chr2.2:61631769-61631788 MS.gene003017:intron 25.0%
! TTGACAATTAGGCAATTAAA+TGG - chr2.2:61630448-61630467 MS.gene003017:intron 25.0%
! TTTGGAGGTTAGAAAATATT+TGG - chr2.2:61631784-61631803 MS.gene003017:intron 25.0%
!! AAACCAATTTTGCAAAACAA+TGG + chr2.2:61629350-61629369 None:intergenic 25.0%
!! TTTGCAAAATTGGTTTCTAT+TGG - chr2.2:61629354-61629373 MS.gene003017:intron 25.0%
!!! AACATTGTTTTTTGGAGTAA+TGG - chr2.2:61631665-61631684 MS.gene003017:intron 25.0%
!!! AAGTTGAGTTTTTTACAAGA+TGG + chr2.2:61629091-61629110 None:intergenic 25.0%
!!! AGAGTTTTAAGGTAATATAG+TGG - chr2.2:61630201-61630220 MS.gene003017:CDS 25.0%
!!! TTATTTTGTAAGTTCACTGT+AGG - chr2.2:61631953-61631972 MS.gene003017:intron 25.0%
!!! TTCTCAAAATTATTTTTGGG+TGG - chr2.2:61629859-61629878 MS.gene003017:intron 25.0%
!!! TTGTTCACAACATTGTTTTT+TGG - chr2.2:61631657-61631676 MS.gene003017:intron 25.0%
!!! TTTAACATAAGCTGTTTTCA+CGG + chr2.2:61632373-61632392 None:intergenic 25.0%
AAACTATCAACTTCAGATGA+TGG - chr2.2:61632856-61632875 MS.gene003017:CDS 30.0%
AAAGAGAAAACAAGAAAAGG+AGG - chr2.2:61630734-61630753 MS.gene003017:intron 30.0%
AACTATCAACTTCAGATGAT+GGG - chr2.2:61632857-61632876 MS.gene003017:CDS 30.0%
AATCCAAACAAACCCTAAAT+TGG + chr2.2:61632238-61632257 None:intergenic 30.0%
AATCTATATTCAGGGAACAA+TGG - chr2.2:61631860-61631879 MS.gene003017:intron 30.0%
AATGCTCTGCATTCAAAAAT+AGG + chr2.2:61632088-61632107 None:intergenic 30.0%
ACCCAAATGGCATAAAAATA+GGG + chr2.2:61630851-61630870 None:intergenic 30.0%
ATGTGTGATAACAACAACAA+AGG + chr2.2:61632518-61632537 None:intergenic 30.0%
ATTGAAATGTGATATCAAGC+GGG + chr2.2:61632774-61632793 None:intergenic 30.0%
ATTGAACCAAGATAAGAGTA+AGG + chr2.2:61629420-61629439 None:intergenic 30.0%
CAAGATAAGAGTAAGGTAAA+AGG + chr2.2:61629413-61629432 None:intergenic 30.0%
GATGTACTTATTTAATCGAC+AGG + chr2.2:61631325-61631344 None:intergenic 30.0%
GATTGAAATGTGATATCAAG+CGG + chr2.2:61632775-61632794 None:intergenic 30.0%
GGGAAAATATACTTTCTTCA+TGG - chr2.2:61632027-61632046 MS.gene003017:intron 30.0%
GGTTTGTATTTGTCCAATTT+AGG - chr2.2:61632222-61632241 MS.gene003017:intron 30.0%
TAACCACTATTCTATATTCG+AGG + chr2.2:61629787-61629806 None:intergenic 30.0%
TATGTGTGTGTGTAATTTGA+TGG - chr2.2:61629386-61629405 MS.gene003017:intron 30.0%
TTTCATAGTAAAACCCTGTT+TGG + chr2.2:61632485-61632504 None:intergenic 30.0%
TTTCTTCATGGTTATATCGA+TGG - chr2.2:61632039-61632058 MS.gene003017:intron 30.0%
! ATACACTATTTTGCCAATAG+CGG - chr2.2:61630473-61630492 MS.gene003017:intron 30.0%
! CTTTTACCTTACTCTTATCT+TGG - chr2.2:61629411-61629430 MS.gene003017:intron 30.0%
! GTATTATACTTTTCGTGAGA+AGG - chr2.2:61629210-61629229 MS.gene003017:CDS 30.0%
! TGGCTTTTATAATCTTGACA+AGG - chr2.2:61631976-61631995 MS.gene003017:intron 30.0%
!! AGAAAATATTTGGAGTATCG+AGG - chr2.2:61631794-61631813 MS.gene003017:intron 30.0%
!! AGTTTTCTGTTTGAGTTCTT+TGG - chr2.2:61632201-61632220 MS.gene003017:intron 30.0%
!! TTAAGGTAATATAGTGGACT+GGG - chr2.2:61630207-61630226 MS.gene003017:CDS 30.0%
!! TTTAAGGTAATATAGTGGAC+TGG - chr2.2:61630206-61630225 MS.gene003017:CDS 30.0%
!!! TCCCTATTTTTATGCCATTT+GGG - chr2.2:61630847-61630866 MS.gene003017:intron 30.0%
!!! TTCCCTATTTTTATGCCATT+TGG - chr2.2:61630846-61630865 MS.gene003017:intron 30.0%
!!! TTTTCTAGTTCTGGTGTTTT+TGG - chr2.2:61630657-61630676 MS.gene003017:intron 30.0%
AAAAAACTCGATCTTCTAGG+AGG + chr2.2:61631839-61631858 None:intergenic 35.0%
AACACATTAAAGACGTCGAA+AGG + chr2.2:61630135-61630154 None:intergenic 35.0%
AAGAAAGGAGTGAAATGGAA+TGG + chr2.2:61631159-61631178 None:intergenic 35.0%
AAGATTGTAGTGAAACCTCT+TGG + chr2.2:61630898-61630917 None:intergenic 35.0%
AAGCACTCGAAACTTATCTT+AGG - chr2.2:61629882-61629901 MS.gene003017:intron 35.0%
AAGTGCTTTATCATAGCAAC+AGG - chr2.2:61632559-61632578 MS.gene003017:intron 35.0%
AATAAGCTGAAAACAGCTTG+TGG + chr2.2:61632340-61632359 None:intergenic 35.0%
AATGGTTTCACCGTAAATGA+CGG - chr2.2:61631683-61631702 MS.gene003017:intron 35.0%
ACATCAGAAACATATCTTCC+TGG + chr2.2:61631021-61631040 None:intergenic 35.0%
ACCTTAAAACTCTCCAACAA+TGG + chr2.2:61630194-61630213 None:intergenic 35.0%
ACTATCAACTTCAGATGATG+GGG - chr2.2:61632858-61632877 MS.gene003017:CDS 35.0%
AGATTGTAGTGAAACCTCTT+GGG + chr2.2:61630897-61630916 None:intergenic 35.0%
AGCACTCGAAACTTATCTTA+GGG - chr2.2:61629883-61629902 MS.gene003017:intron 35.0%
AGTGTATCCTAGAACTATAG+AGG - chr2.2:61630324-61630343 MS.gene003017:CDS 35.0%
AGTTCTCATTCCTTCTTATG+AGG + chr2.2:61632173-61632192 None:intergenic 35.0%
ATACAGTACCTCCAAAAATG+AGG + chr2.2:61631741-61631760 None:intergenic 35.0%
ATGAAATTCAGACTCAGACA+CGG + chr2.2:61629609-61629628 None:intergenic 35.0%
ATTCAACACCAAGTAACACA+AGG + chr2.2:61630795-61630814 None:intergenic 35.0%
CACCCAAATGGCATAAAAAT+AGG + chr2.2:61630852-61630871 None:intergenic 35.0%
CCATTGTTACAGAGTAACAA+TGG + chr2.2:61631062-61631081 None:intergenic 35.0%
CCATTGTTACTCTGTAACAA+TGG - chr2.2:61631059-61631078 MS.gene003017:intron 35.0%
CCTTAAAACTCTCCAACAAT+GGG + chr2.2:61630193-61630212 None:intergenic 35.0%
CTGGGTAATAATGTTAATCG+TGG - chr2.2:61630225-61630244 MS.gene003017:CDS 35.0%
CTTCCTCGAATATAGAATAG+TGG - chr2.2:61629781-61629800 MS.gene003017:intron 35.0%
GAACAAACCTCTATAGTTCT+AGG + chr2.2:61630334-61630353 None:intergenic 35.0%
GGTCAGAAAACATAAGATTG+TGG + chr2.2:61630683-61630702 None:intergenic 35.0%
TAATTGTCAATTGTCAAGCC+AGG + chr2.2:61630438-61630457 None:intergenic 35.0%
TACTCTGTAACAATGGAAAC+AGG - chr2.2:61631066-61631085 MS.gene003017:intron 35.0%
TGATAACAACAACAAAGGAC+TGG + chr2.2:61632513-61632532 None:intergenic 35.0%
TGGCTTGACAATTGACAATT+AGG - chr2.2:61630437-61630456 MS.gene003017:intron 35.0%
TTCAATCATCACCACACAAT+TGG - chr2.2:61632788-61632807 MS.gene003017:intron 35.0%
TTTATCATAGCAACAGGAAC+CGG - chr2.2:61632565-61632584 MS.gene003017:intron 35.0%
! ATCTTATGTTTTCTGACCTG+TGG - chr2.2:61630685-61630704 MS.gene003017:intron 35.0%
! ATCTTCAAAACTAGTTTGCG+TGG - chr2.2:61629942-61629961 MS.gene003017:intron 35.0%
! ATGCAATTTTCAACCAAGCT+AGG - chr2.2:61631501-61631520 MS.gene003017:intron 35.0%
! ATTTTCCCACACACATATCA+GGG + chr2.2:61632015-61632034 None:intergenic 35.0%
! CCACATCATTTCCTTTTGAA+GGG + chr2.2:61631481-61631500 None:intergenic 35.0%
! GAGAGGTGTGAAACTTATTA+GGG - chr2.2:61629322-61629341 MS.gene003017:intron 35.0%
! TACACCTCTCTATTTGAGAT+TGG - chr2.2:61630985-61631004 MS.gene003017:intron 35.0%
! TATTTTCCCACACACATATC+AGG + chr2.2:61632016-61632035 None:intergenic 35.0%
! TCCACATCATTTCCTTTTGA+AGG + chr2.2:61631482-61631501 None:intergenic 35.0%
! TCTTCAAAACTAGTTTGCGT+GGG - chr2.2:61629943-61629962 MS.gene003017:intron 35.0%
! TGAGAGGTGTGAAACTTATT+AGG - chr2.2:61629321-61629340 MS.gene003017:intron 35.0%
! TGTCCAATTTAGGGTTTGTT+TGG - chr2.2:61632232-61632251 MS.gene003017:intron 35.0%
! TTATACTTTTCGTGAGAAGG+AGG - chr2.2:61629213-61629232 MS.gene003017:CDS 35.0%
! TTTTGTAAGTTCACTGTAGG+TGG - chr2.2:61631956-61631975 MS.gene003017:intron 35.0%
!! AAGTTGAGCTAGTTCTGAAT+AGG + chr2.2:61629979-61629998 None:intergenic 35.0%
!! ACCACATTTGACTTGATTTG+TGG + chr2.2:61630588-61630607 None:intergenic 35.0%
!! AGCTCAACTTGTTAAAGAGT+GGG - chr2.2:61629989-61630008 MS.gene003017:intron 35.0%
!! GCACCATTGTTTTGCAAAAT+TGG - chr2.2:61629344-61629363 MS.gene003017:intron 35.0%
!! TAGCTCAACTTGTTAAAGAG+TGG - chr2.2:61629988-61630007 MS.gene003017:intron 35.0%
AAAGCAAGTCAACCCATTGT+TGG - chr2.2:61630178-61630197 MS.gene003017:CDS 40.0%
AAAGTGACTTCTCCATTCAC+AGG + chr2.2:61631238-61631257 None:intergenic 40.0%
AAGAACACTTGGAAGCAGTT+CGG - chr2.2:61632619-61632638 MS.gene003017:intron 40.0%
AAGTGAGTGAGGTGTGAAAT+TGG - chr2.2:61629290-61629309 MS.gene003017:intron 40.0%
ACGTCAAGAAAGGAGTGAAA+TGG + chr2.2:61631164-61631183 None:intergenic 40.0%
AGACTGCTTAAGAGAGCTTA+TGG - chr2.2:61632296-61632315 MS.gene003017:intron 40.0%
AGGAGTGAAATGGAATGGTT+TGG + chr2.2:61631154-61631173 None:intergenic 40.0%
AGTGAGTGAGGTGTGAAATT+GGG - chr2.2:61629291-61629310 MS.gene003017:intron 40.0%
ATGTTGTGAACAACAGACTC+AGG + chr2.2:61631650-61631669 None:intergenic 40.0%
CAATTGTACATTGTCTCCAG+TGG - chr2.2:61631440-61631459 MS.gene003017:intron 40.0%
CATCAACCTCAATACAACTC+AGG - chr2.2:61632735-61632754 MS.gene003017:intron 40.0%
CCCTTCAAAAGGAAATGATG+TGG - chr2.2:61631478-61631497 MS.gene003017:intron 40.0%
CTATGTTTGCACGTCAAGAA+AGG + chr2.2:61631174-61631193 None:intergenic 40.0%
CTGAGTTGTATTGAGGTTGA+TGG + chr2.2:61632737-61632756 None:intergenic 40.0%
CTTGCCAATCTCAAATAGAG+AGG + chr2.2:61630992-61631011 None:intergenic 40.0%
GCACTCGAAACTTATCTTAG+GGG - chr2.2:61629884-61629903 MS.gene003017:intron 40.0%
GCCACAAATCAAGTCAAATG+TGG - chr2.2:61630584-61630603 MS.gene003017:intron 40.0%
GCTATATCGCTATAGCATAG+CGG + chr2.2:61630362-61630381 None:intergenic 40.0%
GGGTAATTACTCCAATTAGC+TGG - chr2.2:61630410-61630429 MS.gene003017:intron 40.0%
GTAACACAAGGTTGCAGTAA+TGG + chr2.2:61630783-61630802 None:intergenic 40.0%
GTGCAAACATAGCATCTTGA+TGG - chr2.2:61631182-61631201 MS.gene003017:intron 40.0%
GTGGAGAAGTAACATAGAAG+AGG - chr2.2:61630704-61630723 MS.gene003017:intron 40.0%
TAAAAAGTCTGAATGCCCCA+AGG - chr2.2:61632107-61632126 MS.gene003017:intron 40.0%
TCAACAAGCTTTACTGGAAC+TGG - chr2.2:61631575-61631594 MS.gene003017:intron 40.0%
TGAAACCTCTTGGGCTTAAA+AGG + chr2.2:61630888-61630907 None:intergenic 40.0%
TGTTGAGAGTTAGAAGCAGT+TGG + chr2.2:61631626-61631645 None:intergenic 40.0%
TTGAAACAGTGAAGTGAGTG+AGG - chr2.2:61629279-61629298 MS.gene003017:CDS 40.0%
! CAGTCACCACAGACATTTTA+CGG - chr2.2:61630611-61630630 MS.gene003017:intron 40.0%
! CCCATTGTTGGAGAGTTTTA+AGG - chr2.2:61630190-61630209 MS.gene003017:CDS 40.0%
! CTCTCTATTTGAGATTGGCA+AGG - chr2.2:61630990-61631009 MS.gene003017:intron 40.0%
! CTTCTATGTTACTTCTCCAC+AGG + chr2.2:61630704-61630723 None:intergenic 40.0%
! GTCTAATGGCAATGCTCTTT+TGG - chr2.2:61630099-61630118 MS.gene003017:intron 40.0%
! TACTGCAACCTTGTGTTACT+TGG - chr2.2:61630784-61630803 MS.gene003017:intron 40.0%
! TCCAAAAATGAGGCATTTGC+AGG + chr2.2:61631731-61631750 None:intergenic 40.0%
! TCCTGCAAATGCCTCATTTT+TGG - chr2.2:61631727-61631746 MS.gene003017:intron 40.0%
! TCTCAAATAGAGAGGTGTAG+CGG + chr2.2:61630984-61631003 None:intergenic 40.0%
! TGCTATTTGACAACACTGCT+GGG - chr2.2:61630390-61630409 MS.gene003017:CDS 40.0%
! TGGTTTGGAATCAGATAGAG+CGG + chr2.2:61631139-61631158 None:intergenic 40.0%
! TTTATGCCATTTGGGTGAGA+GGG - chr2.2:61630855-61630874 MS.gene003017:intron 40.0%
! TTTTGCTGGAGCAGTTATTG+CGG - chr2.2:61630562-61630581 MS.gene003017:intron 40.0%
!! CTTCTAGGAGGAGTCATTTT+GGG + chr2.2:61631827-61631846 None:intergenic 40.0%
!! GTGTTACTTGGTGTTGAATG+TGG - chr2.2:61630796-61630815 MS.gene003017:intron 40.0%
!! TCAACTTGTTAAAGAGTGGG+AGG - chr2.2:61629992-61630011 MS.gene003017:intron 40.0%
!! TCTTCTAGGAGGAGTCATTT+TGG + chr2.2:61631828-61631847 None:intergenic 40.0%
!! TGCAAATGCCTCATTTTTGG+AGG - chr2.2:61631730-61631749 MS.gene003017:intron 40.0%
!! TTTTATGCCATTTGGGTGAG+AGG - chr2.2:61630854-61630873 MS.gene003017:intron 40.0%
!!! ATTGAACCTTTTTTCACCGC+CGG + chr2.2:61629045-61629064 None:intergenic 40.0%
AAGGAGCCAAGCTTCATTTC+AGG - chr2.2:61632589-61632608 MS.gene003017:intron 45.0%
AATGAAGCTTGGCTCCTTTC+CGG + chr2.2:61632587-61632606 None:intergenic 45.0%
AGAATGCCCTGATATGTGTG+TGG - chr2.2:61632006-61632025 MS.gene003017:intron 45.0%
AGGAGCCAAGCTTCATTTCA+GGG - chr2.2:61632590-61632609 MS.gene003017:intron 45.0%
AGGTCTAGACGCATCAATGA+AGG + chr2.2:61632825-61632844 None:intergenic 45.0%
ATGTGGCTGATGGAAGAAAG+AGG - chr2.2:61630813-61630832 MS.gene003017:intron 45.0%
ATTACACCGGCGGTGAAAAA+AGG - chr2.2:61629036-61629055 MS.gene003017:CDS 45.0%
CAACACGAAACTGGGATAGT+GGG + chr2.2:61630960-61630979 None:intergenic 45.0%
CAAGAAAAGGAGGACAGCAA+CGG - chr2.2:61630744-61630763 MS.gene003017:intron 45.0%
CAAGCTTCATTTCAGGGAGT+GGG - chr2.2:61632596-61632615 MS.gene003017:intron 45.0%
CCAAGGTCAACAAGCTTTAC+TGG - chr2.2:61631569-61631588 MS.gene003017:intron 45.0%
CCTCAAAGGTCCGTCATTTA+CGG + chr2.2:61631696-61631715 None:intergenic 45.0%
GAAATTGGGAGAGATGTGAG+AGG - chr2.2:61629305-61629324 MS.gene003017:intron 45.0%
GAACTTCAAGCACCTGTGAA+TGG - chr2.2:61631223-61631242 MS.gene003017:intron 45.0%
GAATGCCCTGATATGTGTGT+GGG - chr2.2:61632007-61632026 MS.gene003017:intron 45.0%
GCACATGTACTCCTCAGATT+AGG - chr2.2:61629493-61629512 MS.gene003017:intron 45.0%
GCATACTGTCGTAGTAGTGT+AGG - chr2.2:61629754-61629773 MS.gene003017:CDS 45.0%
GGATCATCCAATCTCCTCAA+AGG + chr2.2:61631710-61631729 None:intergenic 45.0%
GTAATACTCCTGAGGACCAT+CGG + chr2.2:61629021-61629040 None:intergenic 45.0%
TATCGGAATCAGCAGATGGT+CGG + chr2.2:61628992-61629011 None:intergenic 45.0%
TCATTGATGCGTCTAGACCT+GGG - chr2.2:61632825-61632844 MS.gene003017:CDS 45.0%
TCTCATCAGCCAGAACCTTT+GGG + chr2.2:61632889-61632908 None:intergenic 45.0%
TGTGGCTGATGGAAGAAAGA+GGG - chr2.2:61630814-61630833 MS.gene003017:intron 45.0%
TTCAACCAAGCTAGGCAACT+TGG - chr2.2:61631509-61631528 MS.gene003017:intron 45.0%
TTCATTGATGCGTCTAGACC+TGG - chr2.2:61632824-61632843 MS.gene003017:intron 45.0%
! ACAGGTGTGTTGCATTTTGC+TGG - chr2.2:61630548-61630567 MS.gene003017:intron 45.0%
! AGCTAGCCTGAGTTGTATTG+AGG + chr2.2:61632744-61632763 None:intergenic 45.0%
! ATACAACTCAGGCTAGCTGA+TGG - chr2.2:61632746-61632765 MS.gene003017:intron 45.0%
! CTGCTATTTGACAACACTGC+TGG - chr2.2:61630389-61630408 MS.gene003017:CDS 45.0%
! GAGGAGTACATGTGCTTCAT+AGG + chr2.2:61629488-61629507 None:intergenic 45.0%
!! AGAGCATTGCCATTAGACCA+AGG + chr2.2:61630097-61630116 None:intergenic 45.0%
!! AGCTGTTTTCACGGAGCTTA+TGG + chr2.2:61632364-61632383 None:intergenic 45.0%
!! CATTTCCTTTTGAAGGGTCC+TGG + chr2.2:61631475-61631494 None:intergenic 45.0%
!! CCAGTAAAGCTTGTTGACCT+TGG + chr2.2:61631572-61631591 None:intergenic 45.0%
!! GTAAAGCTTGTTGACCTTGG+AGG + chr2.2:61631569-61631588 None:intergenic 45.0%
!! TTGGTGTTGAATGTGGCTGA+TGG - chr2.2:61630803-61630822 MS.gene003017:intron 45.0%
!! TTTGGCCTTTTAAGCCCAAG+AGG - chr2.2:61630880-61630899 MS.gene003017:intron 45.0%
!!! CTACAGGGGTTTTCTAGTTC+TGG - chr2.2:61630648-61630667 MS.gene003017:intron 45.0%
AACCACGAGACCAGTAGAAG+GGG + chr2.2:61632702-61632721 None:intergenic 50.0%
ACCTGTGTTCAGAGTTGCAG+TGG + chr2.2:61630534-61630553 None:intergenic 50.0%
AGCAGATGGTCGGTTGAGAT+CGG + chr2.2:61628982-61629001 None:intergenic 50.0%
ATCAGCTTCAGGAACCTCCA+AGG - chr2.2:61631552-61631571 MS.gene003017:intron 50.0%
ATTGATGCGTCTAGACCTGG+GGG - chr2.2:61632827-61632846 MS.gene003017:CDS 50.0%
CAAACTCCCTCTCACCCAAA+TGG + chr2.2:61630864-61630883 None:intergenic 50.0%
CAACCACGAGACCAGTAGAA+GGG + chr2.2:61632703-61632722 None:intergenic 50.0%
CAAGCTTTACTGGAACTGGC+AGG - chr2.2:61631579-61631598 MS.gene003017:intron 50.0%
CATAGCAACAGGAACCGGAA+AGG - chr2.2:61632570-61632589 MS.gene003017:intron 50.0%
CATTGATGCGTCTAGACCTG+GGG - chr2.2:61632826-61632845 MS.gene003017:CDS 50.0%
CATTTGGGTGAGAGGGAGTT+TGG - chr2.2:61630862-61630881 MS.gene003017:intron 50.0%
CCAACACGAAACTGGGATAG+TGG + chr2.2:61630961-61630980 None:intergenic 50.0%
CCAAGCTTCATTTCAGGGAG+TGG - chr2.2:61632595-61632614 MS.gene003017:intron 50.0%
CCACTATCCCAGTTTCGTGT+TGG - chr2.2:61630958-61630977 MS.gene003017:intron 50.0%
CCACTCCCTGAAATGAAGCT+TGG + chr2.2:61632598-61632617 None:intergenic 50.0%
CTCATCAGCCAGAACCTTTG+GGG + chr2.2:61632888-61632907 None:intergenic 50.0%
CTGTGGCCGTAAAATGTCTG+TGG + chr2.2:61630620-61630639 None:intergenic 50.0%
CTTGTCCAGGACCCTTCAAA+AGG - chr2.2:61631467-61631486 MS.gene003017:intron 50.0%
GAGATTGGCAAGGTAGTACC+AGG - chr2.2:61631000-61631019 MS.gene003017:intron 50.0%
GCTGCTCTTCCTTGGTCTAA+TGG - chr2.2:61630085-61630104 MS.gene003017:intron 50.0%
GGCAACTTGGAGCTGTAGAA+AGG - chr2.2:61631522-61631541 MS.gene003017:intron 50.0%
GTCGAGGCAACATTTGTCTC+AGG + chr2.2:61632656-61632675 None:intergenic 50.0%
GTCGTGTCGAACAGATATCC+AGG + chr2.2:61629524-61629543 None:intergenic 50.0%
GTCTCATCAGCCAGAACCTT+TGG + chr2.2:61632890-61632909 None:intergenic 50.0%
GTGGCTGATGGAAGAAAGAG+GGG - chr2.2:61630815-61630834 MS.gene003017:intron 50.0%
TACTCCAATTAGCTGGAGCC+TGG - chr2.2:61630417-61630436 MS.gene003017:intron 50.0%
TAGACGCATCAATGAAGGCG+CGG + chr2.2:61632820-61632839 None:intergenic 50.0%
TCAACCACGAGACCAGTAGA+AGG + chr2.2:61632704-61632723 None:intergenic 50.0%
TCATCAGCCAGAACCTTTGG+GGG + chr2.2:61632887-61632906 None:intergenic 50.0%
TCCACTGCAACTCTGAACAC+AGG - chr2.2:61630530-61630549 MS.gene003017:intron 50.0%
TCGCTATCGGAATCAGCAGA+TGG + chr2.2:61628996-61629015 None:intergenic 50.0%
TGGAACTGGCAGGTTACTCT+CGG - chr2.2:61631589-61631608 MS.gene003017:intron 50.0%
TGGCTGATGGAAGAAAGAGG+GGG - chr2.2:61630816-61630835 MS.gene003017:intron 50.0%
! GACATTTTACGGCCACAGTC+TGG - chr2.2:61630622-61630641 MS.gene003017:intron 50.0%
! TGACGGACCTTTGAGGAGAT+TGG - chr2.2:61631700-61631719 MS.gene003017:intron 50.0%
!! ACGAAACTGGGATAGTGGGA+TGG + chr2.2:61630956-61630975 None:intergenic 50.0%
!! CCGTAAATGACGGACCTTTG+AGG - chr2.2:61631693-61631712 MS.gene003017:intron 50.0%
!! GGTCCTCAGGAGTATTACAC+CGG - chr2.2:61629023-61629042 MS.gene003017:CDS 50.0%
AACTGGCAGGTTACTCTCGG+GGG - chr2.2:61631592-61631611 MS.gene003017:intron 55.0%
AAGGCCTCTGGATCAGCTTC+AGG - chr2.2:61631541-61631560 MS.gene003017:intron 55.0%
AATAGCGGTGCAAGAACGCG+TGG - chr2.2:61630488-61630507 MS.gene003017:intron 55.0%
ACAGCTGACCTCCTATCTGC+AGG + chr2.2:61632141-61632160 None:intergenic 55.0%
ACCAAGGAAGAGCAGCGAGT+GGG + chr2.2:61630081-61630100 None:intergenic 55.0%
ACGAGACCAGTAGAAGGGGT+TGG + chr2.2:61632698-61632717 None:intergenic 55.0%
ACGCGTTCTTGCACCGCTAT+TGG + chr2.2:61630489-61630508 None:intergenic 55.0%
AGCTTGAGCCTGCAGATAGG+AGG - chr2.2:61632130-61632149 MS.gene003017:intron 55.0%
AGGACCATCGGAGTCGCTAT+CGG + chr2.2:61629009-61629028 None:intergenic 55.0%
AGGAGCTTGAGCCTGCAGAT+AGG - chr2.2:61632127-61632146 MS.gene003017:intron 55.0%
AGTAGAAGGGGTTGGAGCTG+AGG + chr2.2:61632690-61632709 None:intergenic 55.0%
AGTTGCAGTGGATCCCTCCA+GGG + chr2.2:61630522-61630541 None:intergenic 55.0%
ATCTGCAGGCTCAAGCTCCT+TGG + chr2.2:61632127-61632146 None:intergenic 55.0%
CAAGCCAGGCTCCAGCTAAT+TGG + chr2.2:61630424-61630443 None:intergenic 55.0%
CAGCTCCAAGTTGCCTAGCT+TGG + chr2.2:61631517-61631536 None:intergenic 55.0%
CAGGGAGTGGGAAGAACACT+TGG - chr2.2:61632608-61632627 MS.gene003017:intron 55.0%
CATCAGCCAGAACCTTTGGG+GGG + chr2.2:61632886-61632905 None:intergenic 55.0%
CCACAGTCTGGTGTCTACAG+GGG - chr2.2:61630634-61630653 MS.gene003017:intron 55.0%
CTCCAGTGGAATGCTTGTCC+AGG - chr2.2:61631454-61631473 MS.gene003017:intron 55.0%
GAAAAGGAGGACAGCAACGG+CGG - chr2.2:61630747-61630766 MS.gene003017:intron 55.0%
GAACTGGCAGGTTACTCTCG+GGG - chr2.2:61631591-61631610 MS.gene003017:intron 55.0%
GATGGAAGAAAGAGGGGGCT+AGG - chr2.2:61630821-61630840 MS.gene003017:intron 55.0%
GATTCCGATAGCGACTCCGA+TGG - chr2.2:61629002-61629021 MS.gene003017:CDS 55.0%
GCCACAGTCTGGTGTCTACA+GGG - chr2.2:61630633-61630652 MS.gene003017:intron 55.0%
GGAACTGGCAGGTTACTCTC+GGG - chr2.2:61631590-61631609 MS.gene003017:intron 55.0%
GGTTCCTGAAGCTGATCCAG+AGG + chr2.2:61631548-61631567 None:intergenic 55.0%
GTAGCGGCCAACACGAAACT+GGG + chr2.2:61630968-61630987 None:intergenic 55.0%
GTCCTGGACAAGCATTCCAC+TGG + chr2.2:61631459-61631478 None:intergenic 55.0%
TCAGCTCCAACCCCTTCTAC+TGG - chr2.2:61632689-61632708 MS.gene003017:intron 55.0%
TCCAGGACACGCCTAATCTG+AGG + chr2.2:61629507-61629526 None:intergenic 55.0%
TCCTCAGATTAGGCGTGTCC+TGG - chr2.2:61629503-61629522 MS.gene003017:intron 55.0%
TCTGCAGGCTCAAGCTCCTT+GGG + chr2.2:61632126-61632145 None:intergenic 55.0%
TGGAAGCAGTTCGGCTTCGA+TGG - chr2.2:61632628-61632647 MS.gene003017:intron 55.0%
TGGAGCTGTAGAAAGGCCTC+TGG - chr2.2:61631529-61631548 MS.gene003017:intron 55.0%
TGTAGCGGCCAACACGAAAC+TGG + chr2.2:61630969-61630988 None:intergenic 55.0%
! AACCCCTTCTACTGGTCTCG+TGG - chr2.2:61632697-61632716 MS.gene003017:intron 55.0%
! AAGGCATCAAGCAGTCGAGC+TGG - chr2.2:61628939-61628958 MS.gene003017:CDS 55.0%
!! CCTCAGGAGTATTACACCGG+CGG - chr2.2:61629026-61629045 MS.gene003017:CDS 55.0%
!! TGATAGTTTTGCCGACCCCC+AGG + chr2.2:61632845-61632864 None:intergenic 55.0%
AAGGAAGAGCAGCGAGTGGG+GGG + chr2.2:61630078-61630097 None:intergenic 60.0%
AGAAGGGGTTGGAGCTGAGG+TGG + chr2.2:61632687-61632706 None:intergenic 60.0%
ATGCGTCTAGACCTGGGGGT+CGG - chr2.2:61632831-61632850 MS.gene003017:CDS 60.0%
CAAGGAAGAGCAGCGAGTGG+GGG + chr2.2:61630079-61630098 None:intergenic 60.0%
CCAAGGAAGAGCAGCGAGTG+GGG + chr2.2:61630080-61630099 None:intergenic 60.0%
CCCCTGTAGACACCAGACTG+TGG + chr2.2:61630637-61630656 None:intergenic 60.0%
CCGCCGGTGTAATACTCCTG+AGG + chr2.2:61629029-61629048 None:intergenic 60.0%
CGCGGATGTCGCCAATTGTG+TGG + chr2.2:61632802-61632821 None:intergenic 60.0%
CTGCAGGCTCAAGCTCCTTG+GGG + chr2.2:61632125-61632144 None:intergenic 60.0%
GAAGGGGTTGGAGCTGAGGT+GGG + chr2.2:61632686-61632705 None:intergenic 60.0%
GACCAAGGAAGAGCAGCGAG+TGG + chr2.2:61630082-61630101 None:intergenic 60.0%
GAGTTGCAGTGGATCCCTCC+AGG + chr2.2:61630523-61630542 None:intergenic 60.0%
GGCCACAGTCTGGTGTCTAC+AGG - chr2.2:61630632-61630651 MS.gene003017:intron 60.0%
GGCGTCACGGGACAACAAGA+AGG - chr2.2:61628920-61628939 MS.gene003017:CDS 60.0%
GGTGCAAGAACGCGTGGTTG+CGG - chr2.2:61630494-61630513 MS.gene003017:intron 60.0%
TAGCGACTCCGATGGTCCTC+AGG - chr2.2:61629010-61629029 MS.gene003017:CDS 60.0%
!! GATGATGGGGTTCCCCCCAA+AGG - chr2.2:61632871-61632890 MS.gene003017:CDS 60.0%
CCCCACTCGCTGCTCTTCCT+TGG - chr2.2:61630077-61630096 MS.gene003017:intron 65.0%
GGGGTTCCCCCCAAAGGTTC+TGG - chr2.2:61632877-61632896 MS.gene003017:CDS 65.0%
!! TGAGGTGGGAGGCGTTGTCG+AGG + chr2.2:61632672-61632691 None:intergenic 65.0%
AACGCGTGGTTGCGGAGCCC+TGG - chr2.2:61630502-61630521 MS.gene003017:intron 70.0%
CGTGGTTGCGGAGCCCTGGA+GGG - chr2.2:61630506-61630525 MS.gene003017:intron 70.0%
GGGGTTGGAGCTGAGGTGGG+AGG + chr2.2:61632683-61632702 None:intergenic 70.0%
GCGTGGTTGCGGAGCCCTGG+AGG - chr2.2:61630505-61630524 MS.gene003017:intron 75.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 61628918 61632964 61628918 ID=MS.gene003017
chr2.2 mRNA 61628918 61632964 61628918 ID=MS.gene003017.t1;Parent=MS.gene003017
chr2.2 exon 61632825 61632964 61632825 ID=MS.gene003017.t1.exon1;Parent=MS.gene003017.t1
chr2.2 CDS 61632825 61632964 61632825 ID=cds.MS.gene003017.t1;Parent=MS.gene003017.t1
chr2.2 exon 61630131 61630422 61630131 ID=MS.gene003017.t1.exon2;Parent=MS.gene003017.t1
chr2.2 CDS 61630131 61630422 61630131 ID=cds.MS.gene003017.t1;Parent=MS.gene003017.t1
chr2.2 exon 61629685 61629780 61629685 ID=MS.gene003017.t1.exon3;Parent=MS.gene003017.t1
chr2.2 CDS 61629685 61629780 61629685 ID=cds.MS.gene003017.t1;Parent=MS.gene003017.t1
chr2.2 exon 61628918 61629301 61628918 ID=MS.gene003017.t1.exon4;Parent=MS.gene003017.t1
chr2.2 CDS 61628918 61629301 61628918 ID=cds.MS.gene003017.t1;Parent=MS.gene003017.t1
Gene Sequence

>MS.gene003017

ATGGCGTCACGGGACAACAAGAAGGCATCAAGCAGTCGAGCTGGCAGAATTCGCACACTCTCCGATCTCAACCGACCATCTGCTGATTCCGATAGCGACTCCGATGGTCCTCAGGAGTATTACACCGGCGGTGAAAAAAGGTTCAATTTTTTTCTCACTCTCTTTTTCTACCATCTTGTAAAAAACTCAACTTTATGATTCCTTTCAGTGTTTTATTGATTTTTAGACTTATGGGTTGTTTCTATTTCTTCTAATTATGTCATAATCATGCTTAAGTTGATGTTTGTACTATGTATTATACTTTTCGTGAGAAGGAGGTTATTTTGTTTGAATCAATAGTTAATAATTTTTTTGGTGTGAATTGAAACAGTGAAGTGAGTGAGGTGTGAAATTGGGAGAGATGTGAGAGGTGTGAAACTTATTAGGGCACCATTGTTTTGCAAAATTGGTTTCTATTGGTGAATTTTTTATGTGTGTGTGTAATTTGATGGCCCTTTTACCTTACTCTTATCTTGGTTCAATTGATTTTATAGTACTAATGATTATAAATCATGTTATTCTTTTGAACCTATGAAGCACATGTACTCCTCAGATTAGGCGTGTCCTGGATATCTGTTCGACACGACAAAAATGATTACATTGAATTATGTCATGTTCTTAAATTATTATCGGTGTTGACGTCTCGTGTCCGTGTCTGAGTCTGAATTTCATAGTTTTGAACTAATATAATTGCAACTATAGGAAATCTTCTTCCTATAGAAATCATGTTACTCTTTTGATGACCCTTTTTAAAACTTATTAGCGATTACAATTGAAACTTATTAGGACATTTTTTAGCATACTGTCGTAGTAGTGTAGGAAATCTTCCTCGAATATAGAATAGTGGTTACAAATCATGTTGTTCTTTTGAACTAATACAATTGCAAAGTTCTTTCAGATTTTTCTCAAAATTATTTTTGGGTGGAAGCACTCGAAACTTATCTTAGGGGATTTAAAAATGATAGTATTTTTGCTTTTGATGAACATCTTCAAAACTAGTTTGCGTGGGCTATTTAAAACCTATTCAGAACTAGCTCAACTTGTTAAAGAGTGGGAGGAGACAAATTTCTCTAAGCGACATGTTTTTTCTCATTTTCTGATTTCATTTGTTCAAATTGCCCCCCACTCGCTGCTCTTCCTTGGTCTAATGGCAATGCTCTTTTGGATTGTGAGCGCCTTTCGACGTCTTTAATGTGTTATGCGAAGTTTTATATTATGACAAAAGCAAGTCAACCCATTGTTGGAGAGTTTTAAGGTAATATAGTGGACTGGGTAATAATGTTAATCGTGGAGTATAGCGTTTTTTTTTTTTATAATTCTAATATGCTATTTTGCCGTCATTTAACAAAACTTTGTTTGTACTAAATAGTGTATCCTAGAACTATAGAGGTTTGTTCAAATTCCGCTATGCTATAGCGATATAGCACTATAACTGCTATTTGACAACACTGCTGGGTAATTACTCCAATTAGCTGGAGCCTGGCTTGACAATTGACAATTAGGCAATTAAATGGTAATACACTATTTTGCCAATAGCGGTGCAAGAACGCGTGGTTGCGGAGCCCTGGAGGGATCCACTGCAACTCTGAACACAGGTGTGTTGCATTTTGCTGGAGCAGTTATTGCGGCCACAAATCAAGTCAAATGTGGTCTGCAGTCACCACAGACATTTTACGGCCACAGTCTGGTGTCTACAGGGGTTTTCTAGTTCTGGTGTTTTTGGCCACAATCTTATGTTTTCTGACCTGTGGAGAAGTAACATAGAAGAGGCTAGAATAAAGAGAAAACAAGAAAAGGAGGACAGCAACGGCGGAGTTGCACAGCCATTACTGCAACCTTGTGTTACTTGGTGTTGAATGTGGCTGATGGAAGAAAGAGGGGGCTAGGTTTTCCCTATTTTTATGCCATTTGGGTGAGAGGGAGTTTGGCCTTTTAAGCCCAAGAGGTTTCACTACAATCTTTTAATTATTTATAAAAAAAAAAAGTAGATTAGCATCCATCCCACTATCCCAGTTTCGTGTTGGCCGCTACACCTCTCTATTTGAGATTGGCAAGGTAGTACCAGGAAGATATGTTTCTGATGTACTCCATTCATTTAATTACCATTGTTACTCTGTAACAATGGAAACAGGATCTTGACCATTCCCTAGTTAAAATTTTAAACAATAATGATTCGTTTCCGCTCTATCTGATTCCAAACCATTCCATTTCACTCCTTTCTTGACGTGCAAACATAGCATCTTGATGGACGTGCTTCACTTTTCTAGAACTTCAAGCACCTGTGAATGGAGAAGTCACTTTGACTACCTTTACTGAAAGTGTTTGATTTTGTACATTAAAAGTTGGTTTTTTGAAAGTATATCTACCTGTCGATTAAATAAGTACATCTGTAATCATGCTATCTAAACTTTTCAAGATTTACCGATAAATATGTCGATGTTTAGTTTGTTTTATGATTTGTTACTTTTCTGCTGATCATGTGACAATTGTACATTGTCTCCAGTGGAATGCTTGTCCAGGACCCTTCAAAAGGAAATGATGTGGATGCAATTTTCAACCAAGCTAGGCAACTTGGAGCTGTAGAAAGGCCTCTGGATCAGCTTCAGGAACCTCCAAGGTCAACAAGCTTTACTGGAACTGGCAGGTTACTCTCGGGGGATACTGTACCAACTGCTTCTAACTCTCAACAACCTGAGTCTGTTGTTCACAACATTGTTTTTTGGAGTAATGGTTTCACCGTAAATGACGGACCTTTGAGGAGATTGGATGATCCTGCAAATGCCTCATTTTTGGAGGTACTGTATTAAGATTCTTATTCTGTAAATAGTTTGGAGGTTAGAAAATATTTGGAGTATCGAGGCTGTTTACCCAAAATGACTCCTCCTAGAAGATCGAGTTTTTTTAATCTATATTCAGGGAACAATGGAATATTAAAAAAAAAATAAAAAATCACTTATATCTTCACTTTTGTAAGTAAATTTTCTCTAATGGTCAGCTTATTTTGTAAGTTCACTGTAGGTGGCTTTTATAATCTTGACAAGGCTATCTAAGAATGCCCTGATATGTGTGTGGGAAAATATACTTTCTTCATGGTTATATCGATGGTTTTATTGTGTTTAGAGATATATCCTATTTTTGAATGCAGAGCATTAAAAAGTCTGAATGCCCCAAGGAGCTTGAGCCTGCAGATAGGAGGTCAGCTGTAAATGTAAACCTCATAAGAAGGAATGAGAACTATCGTGTGAGTTTTCTGTTTGAGTTCTTTGGTTTGTATTTGTCCAATTTAGGGTTTGTTTGGATTGACGTATTTGAGTTTATCTACTGATTTAAGCACTTTTGAGACTGCTTAAGAGAGCTTATGGAAACAGCTGCTGACATGTCCACAAGCTGTTTTCAGCTTATTTCCATAAGCTCCGTGAAAACAGCTTATGTTAAAACAATTCAACTATATTTTATCTTTTGTTATATAAATAGCTTATACGTTAGTATGTACTAATATGATAAACTCTTAATTAAGATGTTTATCCAAACAGGGTTTTACTATGAAACAAAACCAGTCCTTTGTTGTTGTTATCACACATTTCCAATGTACAATAAATAACAAGTGCTTTATCATAGCAACAGGAACCGGAAAGGAGCCAAGCTTCATTTCAGGGAGTGGGAAGAACACTTGGAAGCAGTTCGGCTTCGATGGAACCTGAGACAAATGTTGCCTCGACAACGCCTCCCACCTCAGCTCCAACCCCTTCTACTGGTCTCGTGGTTGATCAGTCATTGCCATCAACCTCAATACAACTCAGGCTAGCTGATGGAACCCGCTTGATATCACATTTCAATCATCACCACACAATTGGCGACATCCGCGCCTTCATTGATGCGTCTAGACCTGGGGGTCGGCAAAACTATCAACTTCAGATGATGGGGTTCCCCCCAAAGGTTCTGGCTGATGAGACACAGACTATAGAGCAAGCAGGATTGGCAAATTCAGTTGTCATGCAGAAATTTTAG
Protein sequence

>MS.gene003017.t1

MASRDNKKASSSRAGRIRTLSDLNRPSADSDSDSDGPQEYYTGGEKSGMLVQDPSKGNDVDAIFNQARQLGAVERPLDQLQEPPRSTSFTGTGRLLSGDTVPTASNSQQPESVVHNIVFWSNGFTVNDGPLRRLDDPANASFLESIKKSECPKELEPADRRSAVNVNLIRRNENYREPERSQASFQGVGRTLGSSSASMEPETNVASTTPPTSAPTPSTGLVVDQSLPSTSIQLRLADGTRLISHFNHHHTIGDIRAFIDASRPGGRQNYQLQMMGFPPKVLADETQTIEQAGLANSVVMQKF