Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003307.t1 | XP_013463012.1 | 85.4 | 857 | 125 | 0 | 1 | 857 | 1 | 857 | 0.00E+00 | 1354.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003307.t1 | Q5BQN5 | 35.0 | 848 | 499 | 14 | 23 | 837 | 1 | 829 | 7.3e-113 | 409.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003307.t1 | A0A072V5F1 | 85.4 | 857 | 125 | 0 | 1 | 857 | 1 | 857 | 0.0e+00 | 1354.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene024274 | MS.gene003307 | PPI |
MS.gene54948 | MS.gene003307 | PPI |
MS.gene065404 | MS.gene003307 | PPI |
MS.gene003307 | MS.gene82956 | PPI |
MS.gene033707 | MS.gene003307 | PPI |
MS.gene83407 | MS.gene003307 | PPI |
MS.gene056552 | MS.gene003307 | PPI |
MS.gene067982 | MS.gene003307 | PPI |
MS.gene065388 | MS.gene003307 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003307.t1 | MTR_2g030300 | 92.765 | 857 | 62 | 0 | 1 | 857 | 1 | 857 | 0.0 | 1571 |
MS.gene003307.t1 | MTR_2g030300 | 92.482 | 838 | 63 | 0 | 2 | 839 | 1 | 838 | 0.0 | 1535 |
MS.gene003307.t1 | MTR_6g060178 | 36.792 | 106 | 67 | 0 | 746 | 851 | 820 | 925 | 1.76e-14 | 78.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003307.t1 | AT2G34730 | 33.871 | 868 | 472 | 20 | 18 | 855 | 27 | 822 | 3.92e-116 | 373 |
MS.gene003307.t1 | AT2G34730 | 32.529 | 870 | 481 | 22 | 18 | 855 | 27 | 822 | 4.59e-103 | 338 |
Find 146 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAACCATTGTCAACAATTTA+TGG | 0.126794 | 2.4:+59379768 | None:intergenic |
CTCAAGTTTGCGTCAGGATT+TGG | 0.210354 | 2.4:-59381184 | MS.gene003307:CDS |
AGACAGATTGTCAACAAAAT+TGG | 0.211709 | 2.4:-59380045 | MS.gene003307:CDS |
GCTTCAACTTTGGAAGAAAA+TGG | 0.221430 | 2.4:-59381024 | MS.gene003307:CDS |
CAATTTATGGATGAGATTAA+TGG | 0.223360 | 2.4:+59379781 | None:intergenic |
TTTGCAGATTATCGAGATTC+TGG | 0.246664 | 2.4:-59376733 | MS.gene003307:intron |
GGTTGACTCCATTTGTTTCC+TGG | 0.252838 | 2.4:+59379802 | None:intergenic |
GATTAGCAAGCCTGATAGTT+TGG | 0.261714 | 2.4:-59380983 | MS.gene003307:CDS |
ATCCGTAATTTCTATCCTTC+TGG | 0.262986 | 2.4:+59381383 | None:intergenic |
TCGACATAAATCCATCTTTC+CGG | 0.263621 | 2.4:+59381447 | None:intergenic |
AACTTGAGATCTCTTTATAT+TGG | 0.270030 | 2.4:+59381199 | None:intergenic |
CCAGGGTAATGTTGCAATAT+TGG | 0.280911 | 2.4:+59377996 | None:intergenic |
TCTCATGCACTTGAGATTCA+TGG | 0.284608 | 2.4:+59380893 | None:intergenic |
GGTGAGTGATTCTGTTATAA+AGG | 0.296011 | 2.4:-59381826 | MS.gene003307:CDS |
GACAGTGCTCAAGTTTCTAA+TGG | 0.302227 | 2.4:-59380337 | MS.gene003307:CDS |
TGAAAGTCTGAAAGATACTA+TGG | 0.302610 | 2.4:-59381415 | MS.gene003307:CDS |
ATGAACGGTTGATTATTTCT+AGG | 0.307582 | 2.4:-59381851 | MS.gene003307:CDS |
TCATTTGTCGGCTTCAACTT+TGG | 0.307670 | 2.4:-59381034 | MS.gene003307:CDS |
TAAATGTCTCTTTAAAGATA+TGG | 0.335516 | 2.4:-59380449 | MS.gene003307:CDS |
CTCCAGAAGGATAGAAATTA+CGG | 0.338178 | 2.4:-59381385 | MS.gene003307:CDS |
GGTTCGGATTTGGTTGGTTT+AGG | 0.341544 | 2.4:-59381492 | MS.gene003307:CDS |
GAAGACTTGCATCTCAAGTA+TGG | 0.342654 | 2.4:-59380403 | MS.gene003307:CDS |
TTGCAGTTTCAAAGATAGAT+TGG | 0.343057 | 2.4:-59380680 | MS.gene003307:CDS |
ATTTAGTTCGGGTTCGGATT+TGG | 0.349008 | 2.4:-59381502 | MS.gene003307:CDS |
TTCTCAGCTTTCTGCTGCTA+TGG | 0.356688 | 2.4:-59380584 | MS.gene003307:CDS |
CATGCTAGCTGATAAGAATA+AGG | 0.365981 | 2.4:-59380623 | MS.gene003307:CDS |
TTCTGAGTGGCAGGAGGAGC+AGG | 0.380725 | 2.4:-59381337 | MS.gene003307:CDS |
TTCAACAAGAAGATTTAGTT+CGG | 0.381962 | 2.4:-59381514 | MS.gene003307:CDS |
GGAGGAGCAGGAGTTTCGTT+TGG | 0.387511 | 2.4:-59381325 | MS.gene003307:CDS |
CTTGTCTTTCTTCAATGAAA+AGG | 0.390403 | 2.4:+59380810 | None:intergenic |
AAGCCTGATAGTTTGGATTC+TGG | 0.395489 | 2.4:-59380976 | MS.gene003307:CDS |
GAGCCAGAATCCAAACTATC+AGG | 0.397077 | 2.4:+59380973 | None:intergenic |
AAATTGAATGAAGTCCTTGA+TGG | 0.397269 | 2.4:-59380745 | MS.gene003307:CDS |
TTTGTTGTTCTCGGCAGCTT+TGG | 0.397817 | 2.4:+59380204 | None:intergenic |
ATGATTGGTGTCATAATAAG+AGG | 0.398440 | 2.4:-59381089 | MS.gene003307:CDS |
AGAAAAGCAAAAGATGGAAT+TGG | 0.398443 | 2.4:-59380098 | MS.gene003307:CDS |
GCAGTTGAGCCAACTCAAAA+AGG | 0.400587 | 2.4:-59381562 | MS.gene003307:CDS |
AAGGAAATAAATAAAATTAG+AGG | 0.402549 | 2.4:-59381543 | MS.gene003307:CDS |
AACGACGTGTACCACCTTCA+TGG | 0.404579 | 2.4:+59381655 | None:intergenic |
ACAAGGGGTAACAGATGCTT+TGG | 0.408825 | 2.4:-59380125 | MS.gene003307:CDS |
GGTTAATGCTGTTGAGGAAC+AGG | 0.417685 | 2.4:-59381799 | MS.gene003307:CDS |
AAGAAGATTTAGTTCGGGTT+CGG | 0.417782 | 2.4:-59381508 | MS.gene003307:CDS |
TGGTAATTCGCAATTGTATC+CGG | 0.418357 | 2.4:-59381290 | MS.gene003307:CDS |
AATTATATTCAAAGGAGCTT+TGG | 0.419678 | 2.4:-59380251 | MS.gene003307:CDS |
TGAGCACATAATTGAGGAAA+TGG | 0.425175 | 2.4:-59381895 | MS.gene003307:CDS |
ATCGAGTCAATTATGATTGA+AGG | 0.426487 | 2.4:-59380292 | MS.gene003307:CDS |
CTTCAACTTTGGAAGAAAAT+GGG | 0.430798 | 2.4:-59381023 | MS.gene003307:CDS |
AAGTAGTTTATGTGTTGGTT+CGG | 0.436422 | 2.4:-59381721 | MS.gene003307:CDS |
GAGGGGTTTGTTGTTATGAA+TGG | 0.440791 | 2.4:-59381969 | MS.gene003307:CDS |
ACAGTGCTCAAGTTTCTAAT+GGG | 0.444042 | 2.4:-59380336 | MS.gene003307:CDS |
TGGTTTAGGTGGTATTCTGC+AGG | 0.444965 | 2.4:-59381478 | MS.gene003307:CDS |
AATTATGATTGAAGGGCTAC+TGG | 0.447637 | 2.4:-59380284 | MS.gene003307:CDS |
GCTTATTTCTCATGGATCCT+TGG | 0.447773 | 2.4:-59381121 | MS.gene003307:CDS |
GGGTTTGTTGTTATGAATGG+TGG | 0.454609 | 2.4:-59381966 | MS.gene003307:CDS |
AGAGATCTCAAGTTTGCGTC+AGG | 0.455688 | 2.4:-59381190 | MS.gene003307:CDS |
AGAAGCTTGAGGATGATGTT+GGG | 0.455998 | 2.4:-59380510 | MS.gene003307:CDS |
TGCTCAAGTTTCTAATGGGC+TGG | 0.456563 | 2.4:-59380332 | MS.gene003307:CDS |
TCGGATTTGGTTGGTTTAGG+TGG | 0.456606 | 2.4:-59381489 | MS.gene003307:CDS |
GTGAGTGATTCTGTTATAAA+GGG | 0.464197 | 2.4:-59381825 | MS.gene003307:CDS |
AAGCTAAGTAGTTTATGTGT+TGG | 0.468005 | 2.4:-59381726 | MS.gene003307:CDS |
TCAACAAGAAGATTTAGTTC+GGG | 0.472303 | 2.4:-59381513 | MS.gene003307:CDS |
GAAATCAACAGTGGAAGAAA+AGG | 0.472349 | 2.4:-59380158 | MS.gene003307:CDS |
GTGCAACGTATATCCTTTCA+AGG | 0.477481 | 2.4:+59378033 | None:intergenic |
GTTGCAATATTGGTGAATAA+TGG | 0.481974 | 2.4:+59378006 | None:intergenic |
TCTCAGCTTTCTGCTGCTAT+GGG | 0.484028 | 2.4:-59380583 | MS.gene003307:CDS |
AAGGGAAACCAGGAAACAAA+TGG | 0.491127 | 2.4:-59379810 | MS.gene003307:CDS |
GCAATTTCTCATTTCCATCA+AGG | 0.492086 | 2.4:+59380731 | None:intergenic |
GTGCACTGGCTTTGTTCTTG+AGG | 0.494154 | 2.4:+59379184 | None:intergenic |
TGATTCTGTTATAAAGGGTA+TGG | 0.496821 | 2.4:-59381820 | MS.gene003307:CDS |
TGTGGAGAACAGTAAAGAGT+TGG | 0.497087 | 2.4:-59380020 | MS.gene003307:CDS |
ACTGGGACGCTTATTTCTCA+TGG | 0.498313 | 2.4:-59381129 | MS.gene003307:CDS |
AACAACACTTTCTGAGTGGC+AGG | 0.500450 | 2.4:-59381346 | MS.gene003307:CDS |
GCTTTCGACAGATCATTTGT+CGG | 0.506401 | 2.4:-59381046 | MS.gene003307:CDS |
ACGACGTGTACCACCTTCAT+GGG | 0.509179 | 2.4:+59381656 | None:intergenic |
ATTAATCAAATTATATTCAA+AGG | 0.512709 | 2.4:-59380259 | MS.gene003307:CDS |
TTTCCTTTGCTGCTGCAACT+AGG | 0.513015 | 2.4:+59379981 | None:intergenic |
AGCTAAAATGATGTGGTCTT+CGG | 0.514765 | 2.4:-59381694 | MS.gene003307:CDS |
CAATATTGCAACATTACCCT+GGG | 0.515679 | 2.4:-59377995 | MS.gene003307:CDS |
ATGTTTCAAGAAATTGTATG+AGG | 0.515816 | 2.4:-59379718 | MS.gene003307:intron |
CAGAAGCTTGAGGATGATGT+TGG | 0.516189 | 2.4:-59380511 | MS.gene003307:CDS |
GGAACAAGAAAAGCAAAAGA+TGG | 0.518661 | 2.4:-59380104 | MS.gene003307:CDS |
TGTTATGAATGGTGGTGAAA+AGG | 0.519449 | 2.4:-59381958 | MS.gene003307:CDS |
TACATGAAGATCTCGAACAA+AGG | 0.522789 | 2.4:-59379928 | MS.gene003307:CDS |
AGTTCGGGTTCGGATTTGGT+TGG | 0.524274 | 2.4:-59381498 | MS.gene003307:CDS |
CAATCTCCTGCTGCAAACTC+CGG | 0.526723 | 2.4:+59381271 | None:intergenic |
TTGTATCCGGAGTTTGCAGC+AGG | 0.528620 | 2.4:-59381277 | MS.gene003307:CDS |
ACATGAAGATCTCGAACAAA+GGG | 0.529153 | 2.4:-59379927 | MS.gene003307:CDS |
TGCACTTAAAACCATGGGAT+TGG | 0.529855 | 2.4:-59379166 | MS.gene003307:CDS |
AGGAGAATGTGCCGGAAAGA+TGG | 0.531020 | 2.4:-59381458 | MS.gene003307:CDS |
CCTTGGAGCATACTGATGAT+TGG | 0.531339 | 2.4:-59381104 | MS.gene003307:CDS |
ACGGTTGATTATTTCTAGGA+TGG | 0.533363 | 2.4:-59381847 | MS.gene003307:CDS |
AAAAGGAGAATTTATTACAA+GGG | 0.533806 | 2.4:-59380141 | MS.gene003307:CDS |
TCGTTTGGAAATTGAGCGGA+TGG | 0.537346 | 2.4:-59381310 | MS.gene003307:CDS |
CTTGTAAGAAGAGAATTGAC+TGG | 0.539649 | 2.4:-59376708 | MS.gene003307:CDS |
TAGGGAAGTGGAAATGATGA+AGG | 0.545644 | 2.4:-59381991 | None:intergenic |
TTTGGATTCTGGCTCTCTGA+AGG | 0.545981 | 2.4:-59380965 | MS.gene003307:CDS |
CCAATATTGCAACATTACCC+TGG | 0.549573 | 2.4:-59377996 | MS.gene003307:CDS |
CTATGGATTCTTTCTCCAGA+AGG | 0.549982 | 2.4:-59381398 | MS.gene003307:CDS |
GAAGTGGAAATGATGAAGGA+GGG | 0.552664 | 2.4:-59381987 | None:intergenic |
GGGTATGGTTAATGCTGTTG+AGG | 0.552686 | 2.4:-59381805 | MS.gene003307:CDS |
GTGTATTGAGGCAAAAGAAA+GGG | 0.560124 | 2.4:-59379828 | MS.gene003307:CDS |
AAAGGAGAATTTATTACAAG+GGG | 0.560840 | 2.4:-59380140 | MS.gene003307:CDS |
CTCTTCTTAGACTCCTTGAA+AGG | 0.561258 | 2.4:-59378046 | MS.gene003307:CDS |
AGTGTATTGAGGCAAAAGAA+AGG | 0.562250 | 2.4:-59379829 | MS.gene003307:CDS |
AAACCTAGTTGCAGCAGCAA+AGG | 0.563546 | 2.4:-59379984 | MS.gene003307:CDS |
GAAAAGGAGAATTTATTACA+AGG | 0.565102 | 2.4:-59380142 | MS.gene003307:CDS |
GCCAGTGCACTTAAAACCAT+GGG | 0.568732 | 2.4:-59379171 | MS.gene003307:CDS |
AGATGCATTGGAGTGTATTG+AGG | 0.572251 | 2.4:-59379840 | MS.gene003307:CDS |
ATCTGAGAATCTTCAACTGA+AGG | 0.576258 | 2.4:-59380647 | MS.gene003307:CDS |
TTGCTTGTACACCAATCCCA+TGG | 0.579201 | 2.4:+59379155 | None:intergenic |
TTGTCAACAAAATTGGATTG+TGG | 0.582697 | 2.4:-59380038 | MS.gene003307:CDS |
TCTTGGTGAGCACATAATTG+AGG | 0.583633 | 2.4:-59381901 | MS.gene003307:CDS |
CATCCATAAATTGTTGACAA+TGG | 0.586642 | 2.4:-59379771 | MS.gene003307:CDS |
TAAACTGTCAAGCTGTTGAG+AGG | 0.588332 | 2.4:+59380075 | None:intergenic |
CTATTGAATCTGAAAGAAAG+AGG | 0.588345 | 2.4:-59380838 | MS.gene003307:CDS |
TCGAGTCAATTATGATTGAA+GGG | 0.591000 | 2.4:-59380291 | MS.gene003307:CDS |
TCGAAAGCTTCAAGTGGACA+TGG | 0.594594 | 2.4:+59381061 | None:intergenic |
AAAGGAAATTGAAGAATACA+AGG | 0.596002 | 2.4:-59379966 | MS.gene003307:CDS |
AGCCAGTGCACTTAAAACCA+TGG | 0.598471 | 2.4:-59379172 | MS.gene003307:CDS |
GGAAGTGGAAATGATGAAGG+AGG | 0.600066 | 2.4:-59381988 | None:intergenic |
TTGGAAGAAAATGGGAAGCA+CGG | 0.601297 | 2.4:-59381015 | MS.gene003307:CDS |
AGGCAAAAGAAAGGGAAACC+AGG | 0.604868 | 2.4:-59379820 | MS.gene003307:CDS |
ACAATCTGTTCAGAAGCTTG+AGG | 0.610988 | 2.4:-59380521 | MS.gene003307:CDS |
AGATAGATTTATGAAGCCTG+TGG | 0.611012 | 2.4:-59381610 | MS.gene003307:CDS |
AAGGATGATGATGAGAGTCT+TGG | 0.618836 | 2.4:-59381918 | MS.gene003307:CDS |
TATTCTGCAGGAGAATGTGC+CGG | 0.623360 | 2.4:-59381466 | MS.gene003307:CDS |
GATCTGTCGAAAGCTTCAAG+TGG | 0.625999 | 2.4:+59381055 | None:intergenic |
TCTTGCAAAGGCTGAAGCAG+AGG | 0.627303 | 2.4:-59379109 | MS.gene003307:intron |
GAAGCTTGAGGATGATGTTG+GGG | 0.628459 | 2.4:-59380509 | MS.gene003307:CDS |
CGTTGTAATGAAACCCATGA+AGG | 0.644493 | 2.4:-59381669 | MS.gene003307:CDS |
AGAAACTTGAGCACTGTCAA+CGG | 0.646105 | 2.4:+59380342 | None:intergenic |
GATAGATTTATGAAGCCTGT+GGG | 0.646275 | 2.4:-59381609 | MS.gene003307:CDS |
AGTTTCGTTTGGAAATTGAG+CGG | 0.647114 | 2.4:-59381314 | MS.gene003307:CDS |
AAGTGGAAATGATGAAGGAG+GGG | 0.647655 | 2.4:-59381986 | None:intergenic |
CGGATGAAGCTAAAATGATG+TGG | 0.651813 | 2.4:-59381701 | MS.gene003307:CDS |
CCAATCATCAGTATGCTCCA+AGG | 0.652705 | 2.4:+59381104 | None:intergenic |
TGTAATGAAACCCATGAAGG+TGG | 0.653529 | 2.4:-59381666 | MS.gene003307:CDS |
TGATTGGTGTCATAATAAGA+GGG | 0.657093 | 2.4:-59381088 | MS.gene003307:CDS |
AACACTTTCTGAGTGGCAGG+AGG | 0.664523 | 2.4:-59381343 | MS.gene003307:CDS |
TCAAATTTAAGACTACCCAC+AGG | 0.666742 | 2.4:+59381594 | None:intergenic |
AATTACGGATCAGTTATCGA+AGG | 0.666771 | 2.4:-59381370 | MS.gene003307:CDS |
GTCACAGCAACAACTGACTG+AGG | 0.687357 | 2.4:-59380554 | MS.gene003307:CDS |
ACTTACGTTGAAATCAACAG+TGG | 0.697644 | 2.4:-59380167 | MS.gene003307:CDS |
TAATGCTGTTGAGGAACAGG+CGG | 0.704892 | 2.4:-59381796 | MS.gene003307:CDS |
AGGTAACAACACTTTCTGAG+TGG | 0.720674 | 2.4:-59381350 | MS.gene003307:CDS |
AATATTGCAACATTACCCTG+GGG | 0.779062 | 2.4:-59377994 | MS.gene003307:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAATCAAATTATATTCAA+AGG | - | chr2.4:59378405-59378424 | MS.gene003307:intron | 10.0% |
!! | ATTTCAAAAAATATCTTATA+GGG | + | chr2.4:59379953-59379972 | None:intergenic | 10.0% |
!! | AAAAATTATATTTAGAAGTG+GGG | + | chr2.4:59380264-59380283 | None:intergenic | 15.0% |
!! | AAGGAAATAAATAAAATTAG+AGG | - | chr2.4:59377121-59377140 | MS.gene003307:intron | 15.0% |
!! | AATTATTACAATTATTAGAG+AGG | + | chr2.4:59379214-59379233 | None:intergenic | 15.0% |
!! | CAAAAATTATATTTAGAAGT+GGG | + | chr2.4:59380265-59380284 | None:intergenic | 15.0% |
!! | CATTTCAAAAAATATCTTAT+AGG | + | chr2.4:59379954-59379973 | None:intergenic | 15.0% |
!! | TTATACTTAACAAATCTAAT+TGG | + | chr2.4:59381640-59381659 | None:intergenic | 15.0% |
!!! | AATTTTTTGAAGGATAATTT+GGG | - | chr2.4:59379158-59379177 | MS.gene003307:CDS | 15.0% |
!!! | ATTGTAATTTGTAAAAACTT+AGG | - | chr2.4:59380164-59380183 | MS.gene003307:CDS | 15.0% |
!!! | TAATTTTTTGAAGGATAATT+TGG | - | chr2.4:59379157-59379176 | MS.gene003307:CDS | 15.0% |
!!! | TAGTTGTTTTTAAATATAGT+TGG | - | chr2.4:59380917-59380936 | MS.gene003307:CDS | 15.0% |
!!! | TAGTTTTCTTATTTGTAATT+TGG | - | chr2.4:59381813-59381832 | MS.gene003307:CDS | 15.0% |
!! | AAAAAATTATGTGATGTTTC+TGG | + | chr2.4:59379588-59379607 | None:intergenic | 20.0% |
!! | AAAAGGAGAATTTATTACAA+GGG | - | chr2.4:59378523-59378542 | MS.gene003307:intron | 20.0% |
!! | AAAATTATATTTAGAAGTGG+GGG | + | chr2.4:59380263-59380282 | None:intergenic | 20.0% |
!! | AAAATTTATATTAACCAGCA+AGG | - | chr2.4:59379097-59379116 | MS.gene003307:intron | 20.0% |
!! | ACATGTTTAATTAAATTAGG+AGG | - | chr2.4:59381765-59381784 | MS.gene003307:CDS | 20.0% |
!! | ATTAAATATGTGTACTCTTT+GGG | + | chr2.4:59380889-59380908 | None:intergenic | 20.0% |
!! | ATTACTAAGTAATGTAGAAT+TGG | - | chr2.4:59381308-59381327 | MS.gene003307:CDS | 20.0% |
!! | CTAATAAACCAAAACAAATA+CGG | + | chr2.4:59381496-59381515 | None:intergenic | 20.0% |
!! | GCAAAAATTATATTTAGAAG+TGG | + | chr2.4:59380266-59380285 | None:intergenic | 20.0% |
!! | GTCACATGTTTAATTAAATT+AGG | - | chr2.4:59381762-59381781 | MS.gene003307:CDS | 20.0% |
!! | GTCTTATATCATAATCATAT+TGG | + | chr2.4:59381424-59381443 | None:intergenic | 20.0% |
!! | TATTAAATATGTGTACTCTT+TGG | + | chr2.4:59380890-59380909 | None:intergenic | 20.0% |
!! | TTAAACTCGATTTCATATTA+TGG | - | chr2.4:59379380-59379399 | MS.gene003307:intron | 20.0% |
!! | TTAATGATTGTACATAATTG+AGG | - | chr2.4:59380721-59380740 | MS.gene003307:CDS | 20.0% |
!! | TTTAAATATAGTTGGATGTT+GGG | - | chr2.4:59380925-59380944 | MS.gene003307:CDS | 20.0% |
!!! | AACAACAAAACTTTCATTTT+CGG | + | chr2.4:59381335-59381354 | None:intergenic | 20.0% |
!!! | AACATTAAAACAAAGTATCA+GGG | + | chr2.4:59381197-59381216 | None:intergenic | 20.0% |
!!! | ATATTTTAGTTTGTTGTTCT+CGG | + | chr2.4:59378472-59378491 | None:intergenic | 20.0% |
!!! | ATTAGATATCTTTTCAAGTT+GGG | + | chr2.4:59380472-59380491 | None:intergenic | 20.0% |
!!! | ATTTTTTGAAGGATAATTTG+GGG | - | chr2.4:59379159-59379178 | MS.gene003307:CDS | 20.0% |
!!! | TAAATGTCTCTTTAAAGATA+TGG | - | chr2.4:59378215-59378234 | MS.gene003307:intron | 20.0% |
!!! | TAACATTAAAACAAAGTATC+AGG | + | chr2.4:59381198-59381217 | None:intergenic | 20.0% |
!!! | TATTTATTTCCTTTTTGAGT+TGG | + | chr2.4:59377114-59377133 | None:intergenic | 20.0% |
!!! | TCATATTATGGTAATGATTA+TGG | - | chr2.4:59379392-59379411 | MS.gene003307:intron | 20.0% |
!!! | TTGTAAAAACTTAGGTATTT+TGG | - | chr2.4:59380172-59380191 | MS.gene003307:CDS | 20.0% |
!!! | TTTTAAATATAGTTGGATGT+TGG | - | chr2.4:59380924-59380943 | MS.gene003307:CDS | 20.0% |
! | AAAAAATCATCAAGATGCAT+TGG | - | chr2.4:59378812-59378831 | MS.gene003307:intron | 25.0% |
! | AAAAGATATCTAATCTTCAC+TGG | - | chr2.4:59380478-59380497 | MS.gene003307:CDS | 25.0% |
! | AAAGATATCTAATCTTCACT+GGG | - | chr2.4:59380479-59380498 | MS.gene003307:CDS | 25.0% |
! | AAAGGAAATTGAAGAATACA+AGG | - | chr2.4:59378698-59378717 | MS.gene003307:intron | 25.0% |
! | AAAGGAGAATTTATTACAAG+GGG | - | chr2.4:59378524-59378543 | MS.gene003307:intron | 25.0% |
! | AAATGTTATAAGTGCCAAAA+AGG | - | chr2.4:59379979-59379998 | MS.gene003307:CDS | 25.0% |
! | AACTTGAGATCTCTTTATAT+TGG | + | chr2.4:59377468-59377487 | None:intergenic | 25.0% |
! | AATTATATTCAAAGGAGCTT+TGG | - | chr2.4:59378413-59378432 | MS.gene003307:intron | 25.0% |
! | ACGAGACATTAAATTAGAAA+AGG | + | chr2.4:59378992-59379011 | None:intergenic | 25.0% |
! | AGAAGGAGAAAAAATAGATT+TGG | - | chr2.4:59380378-59380397 | MS.gene003307:CDS | 25.0% |
! | ATCTAATTGGACACTAAAAA+TGG | + | chr2.4:59381627-59381646 | None:intergenic | 25.0% |
! | ATGATTAATATAACCAACTG+CGG | - | chr2.4:59381075-59381094 | MS.gene003307:CDS | 25.0% |
! | ATGGGAACAAGTAAAAATTT+GGG | + | chr2.4:59379759-59379778 | None:intergenic | 25.0% |
! | ATGTTAACATACACAGAAAA+TGG | - | chr2.4:59380075-59380094 | MS.gene003307:CDS | 25.0% |
! | ATGTTTCAAGAAATTGTATG+AGG | - | chr2.4:59378946-59378965 | MS.gene003307:intron | 25.0% |
! | CAATTTATGGATGAGATTAA+TGG | + | chr2.4:59378886-59378905 | None:intergenic | 25.0% |
! | GAAAAGGAGAATTTATTACA+AGG | - | chr2.4:59378522-59378541 | MS.gene003307:intron | 25.0% |
! | GAAAATATGAAAATACGTCA+AGG | - | chr2.4:59380138-59380157 | MS.gene003307:CDS | 25.0% |
! | GACATTACCTTTGAATTATT+TGG | - | chr2.4:59379119-59379138 | MS.gene003307:CDS | 25.0% |
! | GAGACATTCATGAAAAAAAA+AGG | - | chr2.4:59381129-59381148 | MS.gene003307:CDS | 25.0% |
! | GCTGTTTATTATACAATAGT+GGG | - | chr2.4:59380801-59380820 | MS.gene003307:CDS | 25.0% |
! | GTTAAGTATAACTTGAAAGA+TGG | - | chr2.4:59381649-59381668 | MS.gene003307:CDS | 25.0% |
! | TAACCATTGTCAACAATTTA+TGG | + | chr2.4:59378899-59378918 | None:intergenic | 25.0% |
! | TATGGGAACAAGTAAAAATT+TGG | + | chr2.4:59379760-59379779 | None:intergenic | 25.0% |
! | TATTAGAAAACTACTCATCA+TGG | - | chr2.4:59381004-59381023 | MS.gene003307:CDS | 25.0% |
! | TCACATTCCAAATAATTCAA+AGG | + | chr2.4:59379129-59379148 | None:intergenic | 25.0% |
! | TCTGTGTATGTTAACATTTA+GGG | + | chr2.4:59380072-59380091 | None:intergenic | 25.0% |
! | TGATAAAAATAGACTCTCTA+TGG | + | chr2.4:59380776-59380795 | None:intergenic | 25.0% |
! | TGTTTAATTAAATTAGGAGG+TGG | - | chr2.4:59381768-59381787 | MS.gene003307:CDS | 25.0% |
! | TTCAACAAGAAGATTTAGTT+CGG | - | chr2.4:59377150-59377169 | MS.gene003307:intron | 25.0% |
! | TTCTGTGTATGTTAACATTT+AGG | + | chr2.4:59380073-59380092 | None:intergenic | 25.0% |
!! | TTATCTATTTCTCAATCTTG+TGG | - | chr2.4:59379659-59379678 | MS.gene003307:intron | 25.0% |
!! | TTTCTATCCACAAAATTTTC+AGG | + | chr2.4:59379305-59379324 | None:intergenic | 25.0% |
!! | TTTTAACGCTTCATTATTGA+TGG | + | chr2.4:59379081-59379100 | None:intergenic | 25.0% |
!!! | AAATGTGATTTTGATTACCA+TGG | + | chr2.4:59379798-59379817 | None:intergenic | 25.0% |
!!! | GATTAGATATCTTTTCAAGT+TGG | + | chr2.4:59380473-59380492 | None:intergenic | 25.0% |
!!! | TTTTTGATGATATCGATGAA+CGG | - | chr2.4:59376798-59376817 | MS.gene003307:intron | 25.0% |
AAAGGTCAATTACTAGACTT+AGG | + | chr2.4:59380551-59380570 | None:intergenic | 30.0% | |
AAATTGAATGAAGTCCTTGA+TGG | - | chr2.4:59377919-59377938 | MS.gene003307:intron | 30.0% | |
AACAGCCAAACAAATTAGAA+TGG | + | chr2.4:59380034-59380053 | None:intergenic | 30.0% | |
AAGCTAAGTAGTTTATGTGT+TGG | - | chr2.4:59376938-59376957 | MS.gene003307:intron | 30.0% | |
AAGGCTAAAACAAAAGTTTG+TGG | - | chr2.4:59381148-59381167 | MS.gene003307:CDS | 30.0% | |
ACAGTTAATCGTCAAATCTT+AGG | - | chr2.4:59379910-59379929 | MS.gene003307:CDS | 30.0% | |
AGAAAAGCAAAAGATGGAAT+TGG | - | chr2.4:59378566-59378585 | MS.gene003307:intron | 30.0% | |
AGACAGATTGTCAACAAAAT+TGG | - | chr2.4:59378619-59378638 | MS.gene003307:intron | 30.0% | |
AGGCTAAAACAAAAGTTTGT+GGG | - | chr2.4:59381149-59381168 | MS.gene003307:CDS | 30.0% | |
ATCATGGTGTGTGATATAAA+GGG | - | chr2.4:59381020-59381039 | MS.gene003307:CDS | 30.0% | |
ATCGAGTCAATTATGATTGA+AGG | - | chr2.4:59378372-59378391 | MS.gene003307:intron | 30.0% | |
ATTCATTGTCTTCATGAAGA+AGG | - | chr2.4:59381844-59381863 | MS.gene003307:CDS | 30.0% | |
ATTGTAAATCCAACAGCTTA+GGG | - | chr2.4:59381234-59381253 | MS.gene003307:CDS | 30.0% | |
CAACCATATGATTAATTCAC+TGG | + | chr2.4:59380301-59380320 | None:intergenic | 30.0% | |
CAGTGAATTAATCATATGGT+TGG | - | chr2.4:59380299-59380318 | MS.gene003307:CDS | 30.0% | |
CATAATTGAGGTATATGTAG+TGG | - | chr2.4:59380733-59380752 | MS.gene003307:CDS | 30.0% | |
CATCCATAAATTGTTGACAA+TGG | - | chr2.4:59378893-59378912 | MS.gene003307:intron | 30.0% | |
CCAAAACTAACAATAGTAAC+CGG | - | chr2.4:59381715-59381734 | MS.gene003307:CDS | 30.0% | |
CGCTGTTTATTATACAATAG+TGG | - | chr2.4:59380800-59380819 | MS.gene003307:CDS | 30.0% | |
CTATTGAATCTGAAAGAAAG+AGG | - | chr2.4:59377826-59377845 | MS.gene003307:intron | 30.0% | |
CTTGTCTTTCTTCAATGAAA+AGG | + | chr2.4:59377857-59377876 | None:intergenic | 30.0% | |
GACATAAGGATGAAGTAAAT+TGG | + | chr2.4:59379328-59379347 | None:intergenic | 30.0% | |
GGTGAAGAAATAATTAGTAC+TGG | + | chr2.4:59380013-59380032 | None:intergenic | 30.0% | |
GTGAGTGATTCTGTTATAAA+GGG | - | chr2.4:59376839-59376858 | MS.gene003307:intron | 30.0% | |
GTTCATATTTGTGTTCAACT+TGG | - | chr2.4:59379263-59379282 | MS.gene003307:intron | 30.0% | |
GTTGCAATATTGGTGAATAA+TGG | + | chr2.4:59380661-59380680 | None:intergenic | 30.0% | |
TATTGTAAATCCAACAGCTT+AGG | - | chr2.4:59381233-59381252 | MS.gene003307:CDS | 30.0% | |
TCATCCTTATGTCAAGAAAA+CGG | - | chr2.4:59379335-59379354 | MS.gene003307:intron | 30.0% | |
TCGAGTCAATTATGATTGAA+GGG | - | chr2.4:59378373-59378392 | MS.gene003307:intron | 30.0% | |
TCTACATTGCATAACAGAAT+GGG | - | chr2.4:59381051-59381070 | MS.gene003307:CDS | 30.0% | |
TGAAAGTCTGAAAGATACTA+TGG | - | chr2.4:59377249-59377268 | MS.gene003307:intron | 30.0% | |
TGACATTATGATAGTTGTAC+TGG | - | chr2.4:59381470-59381489 | MS.gene003307:CDS | 30.0% | |
TGATTATGATATAAGACGTG+TGG | - | chr2.4:59381427-59381446 | MS.gene003307:CDS | 30.0% | |
TGATTCTGTTATAAAGGGTA+TGG | - | chr2.4:59376844-59376863 | MS.gene003307:intron | 30.0% | |
TGGGAACAAGTAAAAATTTG+GGG | + | chr2.4:59379758-59379777 | None:intergenic | 30.0% | |
TTCTAATAGAAACTGATGCT+TGG | + | chr2.4:59380992-59381011 | None:intergenic | 30.0% | |
TTGCAGTTTCAAAGATAGAT+TGG | - | chr2.4:59377984-59378003 | MS.gene003307:intron | 30.0% | |
TTGTCAACAAAATTGGATTG+TGG | - | chr2.4:59378626-59378645 | MS.gene003307:intron | 30.0% | |
! | AAAAAGTTCTGATCTTGCAA+AGG | - | chr2.4:59379543-59379562 | MS.gene003307:intron | 30.0% |
! | AAAACCGTTTTCTTGACATA+AGG | + | chr2.4:59379342-59379361 | None:intergenic | 30.0% |
! | AAGAAAACTTTTGTCTTAGG+CGG | - | chr2.4:59377800-59377819 | MS.gene003307:intron | 30.0% |
! | AAGCAAGTAGTGTTATTAGA+AGG | - | chr2.4:59380361-59380380 | MS.gene003307:CDS | 30.0% |
! | AATCATATGGTTGGTTCAAA+TGG | - | chr2.4:59380308-59380327 | MS.gene003307:CDS | 30.0% |
! | AGATTTGGAATCAATGATCA+CGG | - | chr2.4:59380393-59380412 | MS.gene003307:CDS | 30.0% |
! | ATATATGGAACCATCTTTTC+AGG | - | chr2.4:59379428-59379447 | MS.gene003307:intron | 30.0% |
! | ATCATATGGTTGGTTCAAAT+GGG | - | chr2.4:59380309-59380328 | MS.gene003307:CDS | 30.0% |
! | ATGAACGGTTGATTATTTCT+AGG | - | chr2.4:59376813-59376832 | MS.gene003307:intron | 30.0% |
! | CCTAAGACAAAAGTTTTCTT+CGG | + | chr2.4:59377800-59377819 | None:intergenic | 30.0% |
! | CTTCAACTTTGGAAGAAAAT+GGG | - | chr2.4:59377641-59377660 | MS.gene003307:intron | 30.0% |
! | CTTGGTTCACCAAAATTTTA+CGG | + | chr2.4:59380440-59380459 | None:intergenic | 30.0% |
! | CTTTTCATTGAAGAAAGACA+AGG | - | chr2.4:59377855-59377874 | MS.gene003307:intron | 30.0% |
! | TAAAAATATAAGTGTCGCCA+TGG | - | chr2.4:59379778-59379797 | MS.gene003307:CDS | 30.0% |
! | TCAACAAGAAGATTTAGTTC+GGG | - | chr2.4:59377151-59377170 | MS.gene003307:intron | 30.0% |
!! | AAGTAGTTTATGTGTTGGTT+CGG | - | chr2.4:59376943-59376962 | MS.gene003307:intron | 30.0% |
!! | AATATGCATTTGCTATGCTA+TGG | - | chr2.4:59379622-59379641 | MS.gene003307:intron | 30.0% |
!! | ATATGCATTTGCTATGCTAT+GGG | - | chr2.4:59379623-59379642 | MS.gene003307:intron | 30.0% |
!! | ATGATTGGTGTCATAATAAG+AGG | - | chr2.4:59377575-59377594 | MS.gene003307:intron | 30.0% |
!! | CTTCACCATTCTAATTTGTT+TGG | - | chr2.4:59380026-59380045 | MS.gene003307:CDS | 30.0% |
!! | GACTTCATTCAATTTTGAGA+TGG | + | chr2.4:59377914-59377933 | None:intergenic | 30.0% |
!! | GGCGACACTTATATTTTTAT+GGG | + | chr2.4:59379777-59379796 | None:intergenic | 30.0% |
!! | GTAAAATTTTGGTGAACCAA+GGG | - | chr2.4:59380439-59380458 | MS.gene003307:CDS | 30.0% |
!! | TGATTGGTGTCATAATAAGA+GGG | - | chr2.4:59377576-59377595 | MS.gene003307:intron | 30.0% |
!! | TGGCGACACTTATATTTTTA+TGG | + | chr2.4:59379778-59379797 | None:intergenic | 30.0% |
!! | TTTGTTGTTGCAAACATGAA+TGG | - | chr2.4:59381346-59381365 | MS.gene003307:CDS | 30.0% |
!!! | ACGTGCTTCTAATTTTTTGA+AGG | - | chr2.4:59379148-59379167 | MS.gene003307:CDS | 30.0% |
!!! | ATCTTTCAGGTTGATCTTTT+AGG | - | chr2.4:59380581-59380600 | MS.gene003307:CDS | 30.0% |
!!! | TCGTTTTTTAGATGGTGTTA+TGG | - | chr2.4:59377027-59377046 | MS.gene003307:intron | 30.0% |
!!! | TCTTTCAGGTTGATCTTTTA+GGG | - | chr2.4:59380582-59380601 | MS.gene003307:CDS | 30.0% |
AAAACAAAAGTTTGTGGGAG+AGG | - | chr2.4:59381154-59381173 | MS.gene003307:CDS | 35.0% | |
AAACAAAAGTTTGTGGGAGA+GGG | - | chr2.4:59381155-59381174 | MS.gene003307:CDS | 35.0% | |
AAACAAAATATTCTCACCCC+AGG | + | chr2.4:59380689-59380708 | None:intergenic | 35.0% | |
AAAGATGGATGAGACCATAA+GGG | - | chr2.4:59381664-59381683 | MS.gene003307:CDS | 35.0% | |
AAATGGTAAGAACTTCTGCA+TGG | + | chr2.4:59381610-59381629 | None:intergenic | 35.0% | |
AATCGGACTATGGTTAAATC+TGG | - | chr2.4:59379880-59379899 | MS.gene003307:CDS | 35.0% | |
AATTACGGATCAGTTATCGA+AGG | - | chr2.4:59377294-59377313 | MS.gene003307:intron | 35.0% | |
AATTATGATTGAAGGGCTAC+TGG | - | chr2.4:59378380-59378399 | MS.gene003307:intron | 35.0% | |
ACAGTGCTCAAGTTTCTAAT+GGG | - | chr2.4:59378328-59378347 | MS.gene003307:intron | 35.0% | |
ACATGAAGATCTCGAACAAA+GGG | - | chr2.4:59378737-59378756 | MS.gene003307:intron | 35.0% | |
ACTTACGTTGAAATCAACAG+TGG | - | chr2.4:59378497-59378516 | MS.gene003307:intron | 35.0% | |
AGATAGATTTATGAAGCCTG+TGG | - | chr2.4:59377054-59377073 | MS.gene003307:intron | 35.0% | |
AGATCAACCTGAAAGATCAT+AGG | + | chr2.4:59380578-59380597 | None:intergenic | 35.0% | |
AGATGGTTCCATATATGACT+TGG | + | chr2.4:59379424-59379443 | None:intergenic | 35.0% | |
AGCTAAAATGATGTGGTCTT+CGG | - | chr2.4:59376970-59376989 | MS.gene003307:intron | 35.0% | |
AGTGTATTGAGGCAAAAGAA+AGG | - | chr2.4:59378835-59378854 | MS.gene003307:intron | 35.0% | |
AGTTTCGTTTGGAAATTGAG+CGG | - | chr2.4:59377350-59377369 | MS.gene003307:intron | 35.0% | |
ATCAAGAGTCTACACAGAAT+CGG | - | chr2.4:59379863-59379882 | MS.gene003307:CDS | 35.0% | |
ATCCGTAATTTCTATCCTTC+TGG | + | chr2.4:59377284-59377303 | None:intergenic | 35.0% | |
ATCTGAGAATCTTCAACTGA+AGG | - | chr2.4:59378017-59378036 | MS.gene003307:CDS | 35.0% | |
CATCATGGTGTGTGATATAA+AGG | - | chr2.4:59381019-59381038 | MS.gene003307:CDS | 35.0% | |
CATGCTAGCTGATAAGAATA+AGG | - | chr2.4:59378041-59378060 | MS.gene003307:CDS | 35.0% | |
CTCCAGAAGGATAGAAATTA+CGG | - | chr2.4:59377279-59377298 | MS.gene003307:intron | 35.0% | |
CTCTACATTGCATAACAGAA+TGG | - | chr2.4:59381050-59381069 | MS.gene003307:CDS | 35.0% | |
CTTGTAAGAAGAGAATTGAC+TGG | - | chr2.4:59381956-59381975 | MS.gene003307:CDS | 35.0% | |
GAAATCAACAGTGGAAGAAA+AGG | - | chr2.4:59378506-59378525 | MS.gene003307:intron | 35.0% | |
GAGAATTGCGCAAAAAGAAT+CGG | - | chr2.4:59376895-59376914 | MS.gene003307:intron | 35.0% | |
GATAGATTTATGAAGCCTGT+GGG | - | chr2.4:59377055-59377074 | MS.gene003307:intron | 35.0% | |
GATCAACCTGAAAGATCATA+GGG | + | chr2.4:59380577-59380596 | None:intergenic | 35.0% | |
GCAATTTCTCATTTCCATCA+AGG | + | chr2.4:59377936-59377955 | None:intergenic | 35.0% | |
GGAACAAGAAAAGCAAAAGA+TGG | - | chr2.4:59378560-59378579 | MS.gene003307:intron | 35.0% | |
GGAACAAGTAAAAATTTGGG+GGG | + | chr2.4:59379756-59379775 | None:intergenic | 35.0% | |
GGGAACAAGTAAAAATTTGG+GGG | + | chr2.4:59379757-59379776 | None:intergenic | 35.0% | |
GGTGAGTGATTCTGTTATAA+AGG | - | chr2.4:59376838-59376857 | MS.gene003307:intron | 35.0% | |
GTGTATTGAGGCAAAAGAAA+GGG | - | chr2.4:59378836-59378855 | MS.gene003307:intron | 35.0% | |
TAACGGAAAATATGCCCTTA+TGG | + | chr2.4:59381681-59381700 | None:intergenic | 35.0% | |
TACATGAAGATCTCGAACAA+AGG | - | chr2.4:59378736-59378755 | MS.gene003307:intron | 35.0% | |
TATTTCTCAATCTTGTGGAG+AGG | - | chr2.4:59379664-59379683 | MS.gene003307:intron | 35.0% | |
TCGACATAAATCCATCTTTC+CGG | + | chr2.4:59377220-59377239 | None:intergenic | 35.0% | |
TGAAAGATCATAGGGTCAAA+AGG | + | chr2.4:59380569-59380588 | None:intergenic | 35.0% | |
TGAGCACATAATTGAGGAAA+TGG | - | chr2.4:59376769-59376788 | MS.gene003307:intron | 35.0% | |
TGGCCAGTGAATTAATCATA+TGG | - | chr2.4:59380295-59380314 | MS.gene003307:CDS | 35.0% | |
TGGTAATTCGCAATTGTATC+CGG | - | chr2.4:59377374-59377393 | MS.gene003307:intron | 35.0% | |
TGTTATAAGTGCCAAAAAGG+AGG | - | chr2.4:59379982-59380001 | MS.gene003307:CDS | 35.0% | |
TTTGCAGATTATCGAGATTC+TGG | - | chr2.4:59381931-59381950 | MS.gene003307:CDS | 35.0% | |
! | AAGAAGATTTAGTTCGGGTT+CGG | - | chr2.4:59377156-59377175 | MS.gene003307:intron | 35.0% |
! | AGAAAACTTTTGTCTTAGGC+GGG | - | chr2.4:59377801-59377820 | MS.gene003307:intron | 35.0% |
! | ATAATTTTTGCCGCATGTTG+TGG | - | chr2.4:59380275-59380294 | MS.gene003307:CDS | 35.0% |
! | CCGAAGAAAACTTTTGTCTT+AGG | - | chr2.4:59377797-59377816 | MS.gene003307:intron | 35.0% |
! | CTAACAGCCTGAAAATTTTG+TGG | - | chr2.4:59379295-59379314 | MS.gene003307:intron | 35.0% |
! | GCTTCAACTTTGGAAGAAAA+TGG | - | chr2.4:59377640-59377659 | MS.gene003307:intron | 35.0% |
! | TCAAATTTAAGACTACCCAC+AGG | + | chr2.4:59377073-59377092 | None:intergenic | 35.0% |
! | TCACCAAAATTTTACGGCAT+AGG | + | chr2.4:59380434-59380453 | None:intergenic | 35.0% |
! | TGATGGATGACGACATAAAA+TGG | + | chr2.4:59379064-59379083 | None:intergenic | 35.0% |
! | TGTTATGAATGGTGGTGAAA+AGG | - | chr2.4:59376706-59376725 | MS.gene003307:CDS | 35.0% |
! | TTTTGACCCTATGATCTTTC+AGG | - | chr2.4:59380568-59380587 | MS.gene003307:CDS | 35.0% |
!! | ACGGTTGATTATTTCTAGGA+TGG | - | chr2.4:59376817-59376836 | MS.gene003307:intron | 35.0% |
!! | CCGGTTACTATTGTTAGTTT+TGG | + | chr2.4:59381718-59381737 | None:intergenic | 35.0% |
!! | CGTAAAATTTTGGTGAACCA+AGG | - | chr2.4:59380438-59380457 | MS.gene003307:CDS | 35.0% |
!! | GGTGAAAAGGTTTTTGAGAA+TGG | - | chr2.4:59376719-59376738 | MS.gene003307:CDS | 35.0% |
!! | GGTTTTTGAGAATGGTGTTA+AGG | - | chr2.4:59376727-59376746 | MS.gene003307:CDS | 35.0% |
!!! | ACACTGTCTGTTTTTGAAAC+TGG | - | chr2.4:59377517-59377536 | MS.gene003307:intron | 35.0% |
!!! | CACTGTCTGTTTTTGAAACT+GGG | - | chr2.4:59377518-59377537 | MS.gene003307:intron | 35.0% |
!!! | CTTTCAGGTTGATCTTTTAG+GGG | - | chr2.4:59380583-59380602 | MS.gene003307:CDS | 35.0% |
!!! | TCAATTTTGAGATGGCATCA+GGG | + | chr2.4:59377906-59377925 | None:intergenic | 35.0% |
!!! | TTCAATTTTGAGATGGCATC+AGG | + | chr2.4:59377907-59377926 | None:intergenic | 35.0% |
AAAAAGAATCGGAGGTCGTT+GGG | - | chr2.4:59376906-59376925 | MS.gene003307:intron | 40.0% | |
AAGCCTGATAGTTTGGATTC+TGG | - | chr2.4:59377688-59377707 | MS.gene003307:intron | 40.0% | |
AAGGGAAACCAGGAAACAAA+TGG | - | chr2.4:59378854-59378873 | MS.gene003307:intron | 40.0% | |
AATGGTAATTCGTCATCCCA+TGG | - | chr2.4:59381364-59381383 | MS.gene003307:CDS | 40.0% | |
AATTGCGCAAAAAGAATCGG+AGG | - | chr2.4:59376898-59376917 | MS.gene003307:intron | 40.0% | |
ACAATCTGTTCAGAAGCTTG+AGG | - | chr2.4:59378143-59378162 | MS.gene003307:intron | 40.0% | |
AGAAGCTTGAGGATGATGTT+GGG | - | chr2.4:59378154-59378173 | MS.gene003307:intron | 40.0% | |
AGAGACAATTCTTAGCCGAA+TGG | + | chr2.4:59381556-59381575 | None:intergenic | 40.0% | |
AGATGCAGATGAATAGGTGT+GGG | - | chr2.4:59379720-59379739 | MS.gene003307:CDS | 40.0% | |
AGATGCATTGGAGTGTATTG+AGG | - | chr2.4:59378824-59378843 | MS.gene003307:intron | 40.0% | |
AGGTAACAACACTTTCTGAG+TGG | - | chr2.4:59377314-59377333 | MS.gene003307:intron | 40.0% | |
CATTTCCGTGTTCTTTCCAT+GGG | + | chr2.4:59381383-59381402 | None:intergenic | 40.0% | |
CGAATTGTGAGGATACATCA+AGG | - | chr2.4:59380333-59380352 | MS.gene003307:CDS | 40.0% | |
CGGATGAAGCTAAAATGATG+TGG | - | chr2.4:59376963-59376982 | MS.gene003307:intron | 40.0% | |
CGTTGTAATGAAACCCATGA+AGG | - | chr2.4:59376995-59377014 | MS.gene003307:intron | 40.0% | |
CTATGGATTCTTTCTCCAGA+AGG | - | chr2.4:59377266-59377285 | MS.gene003307:intron | 40.0% | |
CTCTTCTTAGACTCCTTGAA+AGG | - | chr2.4:59380618-59380637 | MS.gene003307:CDS | 40.0% | |
GAAAGATGGATGAGACCATA+AGG | - | chr2.4:59381663-59381682 | MS.gene003307:CDS | 40.0% | |
GAAGACTTGCATCTCAAGTA+TGG | - | chr2.4:59378261-59378280 | MS.gene003307:intron | 40.0% | |
GACAGTGCTCAAGTTTCTAA+TGG | - | chr2.4:59378327-59378346 | MS.gene003307:intron | 40.0% | |
GATCACGGTATCAGTATATC+AGG | - | chr2.4:59380408-59380427 | MS.gene003307:CDS | 40.0% | |
GATTAGCAAGCCTGATAGTT+TGG | - | chr2.4:59377681-59377700 | MS.gene003307:intron | 40.0% | |
GCTTTCGACAGATCATTTGT+CGG | - | chr2.4:59377618-59377637 | MS.gene003307:intron | 40.0% | |
GGTCAGAACCAAGTCATATA+TGG | - | chr2.4:59379413-59379432 | MS.gene003307:intron | 40.0% | |
GTGCAACGTATATCCTTTCA+AGG | + | chr2.4:59380634-59380653 | None:intergenic | 40.0% | |
TAAACTGTCAAGCTGTTGAG+AGG | + | chr2.4:59378592-59378611 | None:intergenic | 40.0% | |
TAATATAACCAACTGCGGTG+TGG | - | chr2.4:59381080-59381099 | MS.gene003307:CDS | 40.0% | |
TATTCATCTGCATCTGCCTT+GGG | + | chr2.4:59379715-59379734 | None:intergenic | 40.0% | |
TCATTTCCGTGTTCTTTCCA+TGG | + | chr2.4:59381384-59381403 | None:intergenic | 40.0% | |
TCTCATGCACTTGAGATTCA+TGG | + | chr2.4:59377774-59377793 | None:intergenic | 40.0% | |
TCTTGGTGAGCACATAATTG+AGG | - | chr2.4:59376763-59376782 | MS.gene003307:intron | 40.0% | |
TGCACTTAAAACCATGGGAT+TGG | - | chr2.4:59379498-59379517 | MS.gene003307:intron | 40.0% | |
TGCATTCAAGCCTGAAAAGA+TGG | + | chr2.4:59379441-59379460 | None:intergenic | 40.0% | |
TGGATACACACAAGCTGTAA+CGG | + | chr2.4:59381698-59381717 | None:intergenic | 40.0% | |
TGTAATGAAACCCATGAAGG+TGG | - | chr2.4:59376998-59377017 | MS.gene003307:intron | 40.0% | |
TGTGGAGAACAGTAAAGAGT+TGG | - | chr2.4:59378644-59378663 | MS.gene003307:intron | 40.0% | |
TTCAAAGGTAATGTCCTTGC+TGG | + | chr2.4:59379114-59379133 | None:intergenic | 40.0% | |
TTCAAATGGGTCGAATTGTG+AGG | - | chr2.4:59380322-59380341 | MS.gene003307:CDS | 40.0% | |
TTGCAACATAGGTTTGGAGA+GGG | - | chr2.4:59381740-59381759 | MS.gene003307:CDS | 40.0% | |
TTGGAAGAAAATGGGAAGCA+CGG | - | chr2.4:59377649-59377668 | MS.gene003307:intron | 40.0% | |
! | AAAGTATCAGGGCAATTGAG+AGG | + | chr2.4:59381186-59381205 | None:intergenic | 40.0% |
! | AAGGATGATGATGAGAGTCT+TGG | - | chr2.4:59376746-59376765 | MS.gene003307:intron | 40.0% |
! | AGAAACTTGAGCACTGTCAA+CGG | + | chr2.4:59378325-59378344 | None:intergenic | 40.0% |
! | AGGCCTATGCCGTAAAATTT+TGG | - | chr2.4:59380428-59380447 | MS.gene003307:CDS | 40.0% |
! | ATTTAGTTCGGGTTCGGATT+TGG | - | chr2.4:59377162-59377181 | MS.gene003307:intron | 40.0% |
! | CAAGTTGGGTATTAAACCCT+TGG | + | chr2.4:59380458-59380477 | None:intergenic | 40.0% |
! | GCTTATTTCTCATGGATCCT+TGG | - | chr2.4:59377543-59377562 | MS.gene003307:intron | 40.0% |
! | TGTGTACTCTTTGGGCTTTT+TGG | + | chr2.4:59380881-59380900 | None:intergenic | 40.0% |
!! | GAGGGGTTTGTTGTTATGAA+TGG | - | chr2.4:59376695-59376714 | MS.gene003307:CDS | 40.0% |
!! | GGGTTTGTTGTTATGAATGG+TGG | - | chr2.4:59376698-59376717 | MS.gene003307:CDS | 40.0% |
!! | TACTCTTTGGGCTTTTTGGT+TGG | + | chr2.4:59380877-59380896 | None:intergenic | 40.0% |
!! | TCATTTGTCGGCTTCAACTT+TGG | - | chr2.4:59377630-59377649 | MS.gene003307:intron | 40.0% |
!! | TGGCTTTGTAGAACTAGGAA+GGG | - | chr2.4:59381447-59381466 | MS.gene003307:CDS | 40.0% |
!! | TGTACTGGCCGTATTTGTTT+TGG | - | chr2.4:59381485-59381504 | MS.gene003307:CDS | 40.0% |
!!! | GGTACACGTCGTTTTTTAGA+TGG | - | chr2.4:59377019-59377038 | MS.gene003307:intron | 40.0% |
!!! | TACTGGCTTATCCTCCTTTT+TGG | + | chr2.4:59379996-59380015 | None:intergenic | 40.0% |
AAACCTAGTTGCAGCAGCAA+AGG | - | chr2.4:59378680-59378699 | MS.gene003307:intron | 45.0% | |
AACAACACTTTCTGAGTGGC+AGG | - | chr2.4:59377318-59377337 | MS.gene003307:intron | 45.0% | |
AATTAGGAGGTGGCGACATT+TGG | - | chr2.4:59381778-59381797 | MS.gene003307:CDS | 45.0% | |
AATTCACTGGCCACAACATG+CGG | + | chr2.4:59380288-59380307 | None:intergenic | 45.0% | |
ACAAGGGGTAACAGATGCTT+TGG | - | chr2.4:59378539-59378558 | MS.gene003307:intron | 45.0% | |
ACAATTCTTAGCCGAATGGC+AGG | + | chr2.4:59381552-59381571 | None:intergenic | 45.0% | |
AGAGATCTCAAGTTTGCGTC+AGG | - | chr2.4:59377474-59377493 | MS.gene003307:intron | 45.0% | |
AGCCAGTGCACTTAAAACCA+TGG | - | chr2.4:59379492-59379511 | MS.gene003307:intron | 45.0% | |
AGGCAAAAGAAAGGGAAACC+AGG | - | chr2.4:59378844-59378863 | MS.gene003307:intron | 45.0% | |
ATGCAGATGAATAGGTGTGG+GGG | - | chr2.4:59379722-59379741 | MS.gene003307:CDS | 45.0% | |
CAAAAAGAATCGGAGGTCGT+TGG | - | chr2.4:59376905-59376924 | MS.gene003307:intron | 45.0% | |
CAAGGCAGATGCAGATGAAT+AGG | - | chr2.4:59379714-59379733 | MS.gene003307:intron | 45.0% | |
CAATTCTTAGCCGAATGGCA+GGG | + | chr2.4:59381551-59381570 | None:intergenic | 45.0% | |
CAGAAGCTTGAGGATGATGT+TGG | - | chr2.4:59378153-59378172 | MS.gene003307:intron | 45.0% | |
CAGATGCAGATGAATAGGTG+TGG | - | chr2.4:59379719-59379738 | MS.gene003307:CDS | 45.0% | |
CCAAACCTATGTTGCAACAC+CGG | + | chr2.4:59381737-59381756 | None:intergenic | 45.0% | |
CCAATCATCAGTATGCTCCA+AGG | + | chr2.4:59377563-59377582 | None:intergenic | 45.0% | |
CCTTGGAGCATACTGATGAT+TGG | - | chr2.4:59377560-59377579 | MS.gene003307:intron | 45.0% | |
CGGACTATGGTTAAATCTGG+TGG | - | chr2.4:59379883-59379902 | MS.gene003307:CDS | 45.0% | |
CTATTCATCTGCATCTGCCT+TGG | + | chr2.4:59379716-59379735 | None:intergenic | 45.0% | |
CTCAAGTTTGCGTCAGGATT+TGG | - | chr2.4:59377480-59377499 | MS.gene003307:intron | 45.0% | |
CTCATTTACTTCCCTGAGTC+CGG | + | chr2.4:59380966-59380985 | None:intergenic | 45.0% | |
GAAGCTTGAGGATGATGTTG+GGG | - | chr2.4:59378155-59378174 | MS.gene003307:intron | 45.0% | |
GAGCCAGAATCCAAACTATC+AGG | + | chr2.4:59377694-59377713 | None:intergenic | 45.0% | |
GATCTGTCGAAAGCTTCAAG+TGG | + | chr2.4:59377612-59377631 | None:intergenic | 45.0% | |
GATGCAGATGAATAGGTGTG+GGG | - | chr2.4:59379721-59379740 | MS.gene003307:CDS | 45.0% | |
GCAGTTGAGCCAACTCAAAA+AGG | - | chr2.4:59377102-59377121 | MS.gene003307:intron | 45.0% | |
GCCAGTGCACTTAAAACCAT+GGG | - | chr2.4:59379493-59379512 | MS.gene003307:intron | 45.0% | |
GGGTATGGTTAATGCTGTTG+AGG | - | chr2.4:59376859-59376878 | MS.gene003307:intron | 45.0% | |
GGTGTGTGATATAAAGGGTG+AGG | - | chr2.4:59381025-59381044 | MS.gene003307:CDS | 45.0% | |
GGTTAATGCTGTTGAGGAAC+AGG | - | chr2.4:59376865-59376884 | MS.gene003307:intron | 45.0% | |
GTCATCCCATGGAAAGAACA+CGG | - | chr2.4:59381375-59381394 | MS.gene003307:CDS | 45.0% | |
GTCTACACAGAATCGGACTA+TGG | - | chr2.4:59379870-59379889 | MS.gene003307:CDS | 45.0% | |
GTTGCAACATAGGTTTGGAG+AGG | - | chr2.4:59381739-59381758 | MS.gene003307:CDS | 45.0% | |
TAATGCTGTTGAGGAACAGG+CGG | - | chr2.4:59376868-59376887 | MS.gene003307:intron | 45.0% | |
TATCAGTGACCCTAAGCTGT+TGG | + | chr2.4:59381246-59381265 | None:intergenic | 45.0% | |
TATTCTGCAGGAGAATGTGC+CGG | - | chr2.4:59377198-59377217 | MS.gene003307:intron | 45.0% | |
TCGAAAGCTTCAAGTGGACA+TGG | + | chr2.4:59377606-59377625 | None:intergenic | 45.0% | |
TCGTTTGGAAATTGAGCGGA+TGG | - | chr2.4:59377354-59377373 | MS.gene003307:intron | 45.0% | |
TCTCAGCTTTCTGCTGCTAT+GGG | - | chr2.4:59378081-59378100 | MS.gene003307:intron | 45.0% | |
TGGTTTAGGTGGTATTCTGC+AGG | - | chr2.4:59377186-59377205 | MS.gene003307:intron | 45.0% | |
TGTAGACTCTTGATCGCTGA+GGG | + | chr2.4:59379857-59379876 | None:intergenic | 45.0% | |
TTCTCAGCTTTCTGCTGCTA+TGG | - | chr2.4:59378080-59378099 | MS.gene003307:intron | 45.0% | |
TTGCTTGTACACCAATCCCA+TGG | + | chr2.4:59379512-59379531 | None:intergenic | 45.0% | |
TTTCCTTTGCTGCTGCAACT+AGG | + | chr2.4:59378686-59378705 | None:intergenic | 45.0% | |
! | ACTGGGACGCTTATTTCTCA+TGG | - | chr2.4:59377535-59377554 | MS.gene003307:intron | 45.0% |
! | GGTTGACTCCATTTGTTTCC+TGG | + | chr2.4:59378865-59378884 | None:intergenic | 45.0% |
! | TGCTCAAGTTTCTAATGGGC+TGG | - | chr2.4:59378332-59378351 | MS.gene003307:intron | 45.0% |
!! | ACGTGTGGCTTTGTAGAACT+AGG | - | chr2.4:59381442-59381461 | MS.gene003307:CDS | 45.0% |
!! | AGTAACCGGTGTTGCAACAT+AGG | - | chr2.4:59381729-59381748 | MS.gene003307:CDS | 45.0% |
!! | GGTTCGGATTTGGTTGGTTT+AGG | - | chr2.4:59377172-59377191 | MS.gene003307:intron | 45.0% |
!! | GTGGCTTTGTAGAACTAGGA+AGG | - | chr2.4:59381446-59381465 | MS.gene003307:CDS | 45.0% |
!! | TCGGATTTGGTTGGTTTAGG+TGG | - | chr2.4:59377175-59377194 | MS.gene003307:intron | 45.0% |
!! | TTTGGATTCTGGCTCTCTGA+AGG | - | chr2.4:59377699-59377718 | MS.gene003307:intron | 45.0% |
!! | TTTGTTGTTCTCGGCAGCTT+TGG | + | chr2.4:59378463-59378482 | None:intergenic | 45.0% |
!!! | TCCCATGGTTTTAAGTGCAC+TGG | + | chr2.4:59379497-59379516 | None:intergenic | 45.0% |
AACACTTTCTGAGTGGCAGG+AGG | - | chr2.4:59377321-59377340 | MS.gene003307:intron | 50.0% | |
AACGACGTGTACCACCTTCA+TGG | + | chr2.4:59377012-59377031 | None:intergenic | 50.0% | |
ACGACGTGTACCACCTTCAT+GGG | + | chr2.4:59377011-59377030 | None:intergenic | 50.0% | |
AGGAGAATGTGCCGGAAAGA+TGG | - | chr2.4:59377206-59377225 | MS.gene003307:intron | 50.0% | |
ATTTACTTCCCTGAGTCCGG+AGG | + | chr2.4:59380963-59380982 | None:intergenic | 50.0% | |
CAATCTCCTGCTGCAAACTC+CGG | + | chr2.4:59377396-59377415 | None:intergenic | 50.0% | |
CTTGGGTCACATGAGCACAA+GGG | + | chr2.4:59379698-59379717 | None:intergenic | 50.0% | |
GTCACAGCAACAACTGACTG+AGG | - | chr2.4:59378110-59378129 | MS.gene003307:intron | 50.0% | |
GTGTAGACTCTTGATCGCTG+AGG | + | chr2.4:59379858-59379877 | None:intergenic | 50.0% | |
TCTTGCAAAGGCTGAAGCAG+AGG | - | chr2.4:59379555-59379574 | MS.gene003307:intron | 50.0% | |
TGCAGATGAATAGGTGTGGG+GGG | - | chr2.4:59379723-59379742 | MS.gene003307:CDS | 50.0% | |
TTGTATCCGGAGTTTGCAGC+AGG | - | chr2.4:59377387-59377406 | MS.gene003307:intron | 50.0% | |
TTTACTTCCCTGAGTCCGGA+GGG | + | chr2.4:59380962-59380981 | None:intergenic | 50.0% | |
! | AGTTCGGGTTCGGATTTGGT+TGG | - | chr2.4:59377166-59377185 | MS.gene003307:intron | 50.0% |
!! | CCGGTGTTGCAACATAGGTT+TGG | - | chr2.4:59381734-59381753 | MS.gene003307:CDS | 50.0% |
!! | GGTTGATCTTTTAGGGGACG+AGG | - | chr2.4:59380589-59380608 | MS.gene003307:CDS | 50.0% |
!! | GTGCACTGGCTTTGTTCTTG+AGG | + | chr2.4:59379483-59379502 | None:intergenic | 50.0% |
AATGGCAGGGTTGAGCTGGT+AGG | + | chr2.4:59381538-59381557 | None:intergenic | 55.0% | |
ACCAGCTCAACCCTGCCATT+CGG | - | chr2.4:59381538-59381557 | MS.gene003307:CDS | 55.0% | |
CCTTGGGTCACATGAGCACA+AGG | + | chr2.4:59379699-59379718 | None:intergenic | 55.0% | |
CCTTGTGCTCATGTGACCCA+AGG | - | chr2.4:59379696-59379715 | MS.gene003307:intron | 55.0% | |
GGAGGAGCAGGAGTTTCGTT+TGG | - | chr2.4:59377339-59377358 | MS.gene003307:intron | 55.0% | |
TAGGAGGTGGCGACATTTGG+CGG | - | chr2.4:59381781-59381800 | MS.gene003307:CDS | 55.0% | |
TTACTTCCCTGAGTCCGGAG+GGG | + | chr2.4:59380961-59380980 | None:intergenic | 55.0% | |
CCAACTGCGGTGTGGCAATC+AGG | - | chr2.4:59381088-59381107 | MS.gene003307:CDS | 60.0% | |
CCTGATTGCCACACCGCAGT+TGG | + | chr2.4:59381091-59381110 | None:intergenic | 60.0% | |
TACTTCCCTGAGTCCGGAGG+GGG | + | chr2.4:59380960-59380979 | None:intergenic | 60.0% | |
TGGGAATCTTGACCCCCCTC+CGG | - | chr2.4:59380944-59380963 | MS.gene003307:CDS | 60.0% | |
TTCTGAGTGGCAGGAGGAGC+AGG | - | chr2.4:59377327-59377346 | MS.gene003307:intron | 60.0% | |
ACTTCCCTGAGTCCGGAGGG+GGG | + | chr2.4:59380959-59380978 | None:intergenic | 65.0% | |
GCAGGGTTGAGCTGGTAGGC+TGG | + | chr2.4:59381534-59381553 | None:intergenic | 65.0% | |
GCCGAATGGCAGGGTTGAGC+TGG | + | chr2.4:59381542-59381561 | None:intergenic | 65.0% | |
TTGACCCCCCTCCGGACTCA+GGG | - | chr2.4:59380952-59380971 | MS.gene003307:CDS | 65.0% | |
CTTGACCCCCCTCCGGACTC+AGG | - | chr2.4:59380951-59380970 | MS.gene003307:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 59376686 | 59382000 | 59376686 | ID=MS.gene003307 |
chr2.4 | mRNA | 59376686 | 59382000 | 59376686 | ID=MS.gene003307.t1;Parent=MS.gene003307 |
chr2.4 | exon | 59379719 | 59382000 | 59379719 | ID=MS.gene003307.t1.exon1;Parent=MS.gene003307.t1 |
chr2.4 | CDS | 59379719 | 59382000 | 59379719 | ID=cds.MS.gene003307.t1;Parent=MS.gene003307.t1 |
chr2.4 | exon | 59379110 | 59379236 | 59379110 | ID=MS.gene003307.t1.exon2;Parent=MS.gene003307.t1 |
chr2.4 | CDS | 59379110 | 59379236 | 59379110 | ID=cds.MS.gene003307.t1;Parent=MS.gene003307.t1 |
chr2.4 | exon | 59377995 | 59378096 | 59377995 | ID=MS.gene003307.t1.exon3;Parent=MS.gene003307.t1 |
chr2.4 | CDS | 59377995 | 59378096 | 59377995 | ID=cds.MS.gene003307.t1;Parent=MS.gene003307.t1 |
chr2.4 | exon | 59376686 | 59376748 | 59376686 | ID=MS.gene003307.t1.exon4;Parent=MS.gene003307.t1 |
chr2.4 | CDS | 59376686 | 59376748 | 59376686 | ID=cds.MS.gene003307.t1;Parent=MS.gene003307.t1 |
Gene Sequence |
Protein sequence |