AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00342

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00342.t1 MTR_2g437480 92.344 1045 33 5 1 1001 1 1042 0.0 1956
MS.gene00342.t1 MTR_8g037345 78.031 833 129 9 172 1000 110 892 0.0 1284
MS.gene00342.t1 MTR_8g037345 47.239 163 49 7 1 145 12 155 3.27e-26 116
MS.gene00342.t1 MTR_1g081750 32.230 695 368 21 347 960 399 1071 8.65e-93 320
MS.gene00342.t1 MTR_7g026650 31.313 693 389 19 348 960 423 1108 1.74e-86 303
MS.gene00342.t1 MTR_3g071860 31.159 690 377 21 357 960 545 1222 1.18e-85 301
MS.gene00342.t1 MTR_7g450790 31.085 682 351 22 362 960 744 1389 5.58e-85 300
MS.gene00342.t1 MTR_7g029525 31.286 700 353 22 346 960 618 1274 1.52e-84 298
MS.gene00342.t1 MTR_7g450820 31.620 642 345 23 391 960 567 1186 1.14e-78 281
MS.gene00342.t1 MTR_5g083300 29.000 700 408 21 343 960 567 1259 1.08e-77 278
MS.gene00342.t1 MTR_5g083300 29.000 700 408 21 343 960 604 1296 1.59e-77 278
MS.gene00342.t1 MTR_7g050445 30.663 649 345 22 391 960 630 1252 1.11e-76 275
MS.gene00342.t1 MTR_4g088650 30.255 628 343 16 391 960 578 1168 3.10e-74 267
MS.gene00342.t1 MTR_7g450860 29.082 643 354 20 391 960 611 1224 6.23e-71 258
MS.gene00342.t1 MTR_7g450780 27.864 707 383 20 346 960 627 1298 1.33e-68 251
MS.gene00342.t1 MTR_1g080420 24.828 580 335 14 464 956 576 1141 1.45e-42 169
MS.gene00342.t1 MTR_1g080420 24.610 577 340 13 464 956 707 1272 2.36e-42 169
MS.gene00342.t1 MTR_3g106210 24.708 514 318 14 470 958 288 757 1.28e-30 131
MS.gene00342.t1 MTR_3g106210 24.708 514 318 14 470 958 288 757 1.48e-30 131
MS.gene00342.t1 MTR_3g106210 24.708 514 318 14 470 958 288 757 1.84e-30 130
MS.gene00342.t1 MTR_3g106210 24.708 514 318 14 470 958 288 757 1.99e-30 130
MS.gene00342.t1 MTR_7g026620 24.873 591 324 22 344 906 144 642 4.99e-30 127
MS.gene00342.t1 MTR_4g096930 25.486 514 306 17 472 959 736 1198 1.40e-29 128
MS.gene00342.t1 MTR_5g005840 26.141 482 310 16 469 943 362 804 4.72e-29 125
MS.gene00342.t1 MTR_5g004720 24.725 546 335 18 458 958 172 686 5.32e-29 125
MS.gene00342.t1 MTR_8g094070 25.704 533 324 17 463 952 378 881 1.48e-28 124
MS.gene00342.t1 MTR_8g094070 25.516 533 325 16 463 952 378 881 1.64e-28 124
MS.gene00342.t1 MTR_1g013190 25.549 501 318 14 473 955 289 752 3.22e-28 123
MS.gene00342.t1 MTR_5g090090 26.265 514 300 18 469 955 616 1077 4.01e-27 120
MS.gene00342.t1 MTR_5g090090 26.441 503 291 18 469 944 616 1066 4.33e-27 120
MS.gene00342.t1 MTR_1g105050 26.186 485 307 19 469 943 375 818 8.31e-27 119
MS.gene00342.t1 MTR_1g035330 23.870 553 354 17 450 952 175 710 2.94e-26 116
MS.gene00342.t1 MTR_3g053910 25.189 528 316 19 456 955 584 1060 1.16e-24 112
MS.gene00342.t1 MTR_3g053910 25.189 528 316 19 456 955 555 1031 1.42e-24 112
MS.gene00342.t1 MTR_5g020000 24.793 484 325 14 469 942 183 637 5.26e-24 108
MS.gene00342.t1 MTR_1g069755 24.194 496 320 14 491 956 410 879 9.20e-23 105
MS.gene00342.t1 MTR_4g118720 24.259 540 343 19 466 981 1001 1498 6.12e-22 103
MS.gene00342.t1 MTR_4g078495 35.000 180 101 3 808 978 522 694 1.61e-18 91.7
MS.gene00342.t1 MTR_4g078495 27.363 201 115 8 473 662 134 314 2.08e-11 68.6
MS.gene00342.t1 MTR_4g078460 35.000 180 101 3 808 978 808 980 1.88e-18 91.7
MS.gene00342.t1 MTR_4g078460 27.363 201 115 8 473 662 420 600 4.03e-11 67.8
MS.gene00342.t1 MTR_7g078090 25.743 505 295 20 466 937 990 1447 9.47e-18 89.7
MS.gene00342.t1 MTR_2g084695 32.719 217 108 8 710 923 59 240 2.72e-17 84.0
MS.gene00342.t1 MTR_1g053955 31.351 185 109 4 769 943 1017 1193 7.49e-16 83.6
MS.gene00342.t1 MTR_7g039320 22.836 543 322 22 470 992 39 504 5.83e-14 77.0
MS.gene00342.t1 MTR_7g039320 22.836 543 322 22 470 992 39 504 6.10e-14 77.0
MS.gene00342.t1 MTR_1g044120 33.333 144 91 2 810 953 990 1128 9.18e-14 76.6
MS.gene00342.t1 MTR_2g012830 38.211 123 71 2 821 943 1146 1263 2.91e-13 75.1
MS.gene00342.t1 MTR_7g045505 22.388 536 322 22 500 992 18 502 8.24e-13 73.2
MS.gene00342.t1 MTR_7g045505 22.391 527 333 21 500 992 18 502 1.20e-12 72.8
MS.gene00342.t1 MTR_2g084630 31.210 157 96 3 805 953 848 1000 9.33e-12 69.7
MS.gene00342.t1 MTR_2g084630 30.000 150 98 3 805 953 854 997 2.42e-11 68.6
MS.gene00342.t1 MTR_7g089190 32.450 151 93 3 798 944 639 784 3.66e-11 67.8
MS.gene00342.t1 MTR_1g115215 34.127 126 77 3 819 943 880 1000 5.79e-11 67.4
MS.gene00342.t1 MTR_4g078460 27.363 201 115 8 473 662 420 600 6.53e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00342.t1 AT2G16390 63.953 688 230 7 328 1001 208 891 0.0 911
MS.gene00342.t1 AT2G16390 63.953 688 230 7 328 1001 205 888 0.0 910
MS.gene00342.t1 AT2G21450 54.328 670 283 5 352 1001 148 814 0.0 747
MS.gene00342.t1 AT2G21450 54.328 670 283 5 352 1001 155 821 0.0 746
MS.gene00342.t1 AT2G21450 54.328 670 283 5 352 1001 57 723 0.0 746
MS.gene00342.t1 AT1G05490 30.256 704 380 22 343 960 675 1353 6.26e-88 309
MS.gene00342.t1 AT3G42670 28.426 686 401 16 353 960 539 1212 7.05e-81 287
MS.gene00342.t1 AT3G42670 28.467 685 400 17 353 960 539 1210 9.60e-81 287
MS.gene00342.t1 AT3G42670 28.467 685 400 17 353 960 539 1210 9.60e-81 287
MS.gene00342.t1 AT3G42670 28.467 685 400 17 353 960 539 1210 9.60e-81 287
MS.gene00342.t1 AT3G24340 31.644 651 378 15 355 960 453 1081 2.31e-79 281
MS.gene00342.t1 AT5G20420 29.513 698 405 21 348 971 542 1226 5.11e-78 279
MS.gene00342.t1 AT3G32330 37.283 346 175 4 448 784 1 313 2.32e-64 221
MS.gene00342.t1 AT3G32280 35.870 276 128 2 389 664 248 474 6.98e-51 187
MS.gene00342.t1 AT1G08600 26.598 579 322 18 464 956 712 1273 1.20e-43 173
MS.gene00342.t1 AT1G08600 26.598 579 322 18 464 956 712 1273 1.20e-43 173
MS.gene00342.t1 AT1G08600 26.598 579 322 18 464 956 712 1273 1.20e-43 173
MS.gene00342.t1 AT3G31900 32.734 278 127 5 389 666 153 370 4.67e-38 147
MS.gene00342.t1 AT1G08600 26.170 577 306 19 464 956 712 1252 6.11e-37 152
MS.gene00342.t1 AT5G63950 24.859 708 424 23 304 952 214 872 3.99e-29 126
MS.gene00342.t1 AT5G44800 25.144 521 321 16 473 972 692 1164 7.25e-29 125
MS.gene00342.t1 AT3G06010 26.337 486 305 19 469 943 402 845 4.02e-27 119
MS.gene00342.t1 AT5G63950 24.143 700 422 22 304 952 214 855 4.24e-27 119
MS.gene00342.t1 AT4G31900 24.903 518 311 16 470 969 184 641 1.64e-26 117
MS.gene00342.t1 AT4G31900 24.903 518 311 16 470 969 225 682 1.70e-26 117
MS.gene00342.t1 AT4G31900 24.903 518 311 16 470 969 225 682 2.08e-26 117
MS.gene00342.t1 AT2G13370 25.498 502 293 16 470 944 625 1072 2.12e-26 117
MS.gene00342.t1 AT2G13370 25.498 502 293 16 470 944 625 1072 2.12e-26 117
MS.gene00342.t1 AT2G13370 25.498 502 293 16 470 944 625 1072 2.12e-26 117
MS.gene00342.t1 AT2G25170 24.310 580 357 20 420 958 204 742 1.58e-25 115
MS.gene00342.t1 AT2G25170 24.310 580 357 20 420 958 204 742 1.58e-25 115
MS.gene00342.t1 AT2G25170 24.310 580 357 20 420 958 221 759 2.22e-25 114
MS.gene00342.t1 AT2G25170 24.310 580 357 20 420 958 230 768 2.55e-25 114
MS.gene00342.t1 AT5G19310 25.979 485 307 17 469 943 121 563 2.77e-25 113
MS.gene00342.t1 AT5G19310 25.979 485 307 17 469 943 385 827 6.63e-25 112
MS.gene00342.t1 AT2G28290 25.000 532 334 18 469 976 753 1243 1.07e-22 106
MS.gene00342.t1 AT2G28290 25.000 532 334 18 469 976 753 1243 1.08e-22 106
MS.gene00342.t1 AT2G28290 25.000 532 334 18 469 976 753 1243 1.08e-22 106
MS.gene00342.t1 AT2G28290 25.000 532 334 18 469 976 754 1244 1.09e-22 106
MS.gene00342.t1 AT2G28290 25.000 532 334 18 469 976 754 1244 1.12e-22 105
MS.gene00342.t1 AT2G28290 25.000 532 334 18 469 976 753 1243 1.18e-22 105
MS.gene00342.t1 AT2G18760 24.308 506 305 17 491 956 404 871 7.68e-22 102
MS.gene00342.t1 AT2G18760 24.308 506 305 17 491 956 404 871 7.68e-22 102
MS.gene00342.t1 AT2G18760 24.308 506 305 17 491 956 404 871 7.68e-22 102
MS.gene00342.t1 AT2G18760 24.308 506 305 17 491 956 404 871 7.68e-22 102
MS.gene00342.t1 AT2G18760 24.308 506 305 17 491 956 404 871 7.68e-22 102
MS.gene00342.t1 AT2G18760 24.308 506 305 17 491 956 404 871 7.68e-22 102
MS.gene00342.t1 AT2G18760 24.308 506 305 17 491 956 463 930 1.05e-21 102
MS.gene00342.t1 AT2G02090 22.015 536 351 17 470 955 213 731 2.11e-19 94.4
MS.gene00342.t1 AT1G03750 36.306 157 95 2 802 958 523 674 1.37e-18 92.0
MS.gene00342.t1 AT3G19210 30.137 219 127 5 456 662 166 370 1.49e-18 91.7
MS.gene00342.t1 AT3G19210 27.211 147 101 2 813 958 541 682 4.32e-11 67.8
MS.gene00342.t1 AT5G66750 24.863 547 348 20 469 1000 201 699 1.55e-18 91.7
MS.gene00342.t1 AT3G19210 30.137 219 127 5 456 662 166 370 1.81e-18 91.7
MS.gene00342.t1 AT3G19210 27.211 147 101 2 813 958 541 682 2.27e-11 68.6
MS.gene00342.t1 AT3G19210 30.137 219 127 5 456 662 166 370 1.91e-18 91.7
MS.gene00342.t1 AT3G19210 27.211 147 101 2 813 958 539 680 2.58e-11 68.6
MS.gene00342.t1 AT2G46020 25.651 499 302 18 466 937 977 1433 3.04e-18 91.3
MS.gene00342.t1 AT2G46020 25.651 499 302 18 466 937 977 1433 3.04e-18 91.3
MS.gene00342.t1 AT2G46020 25.651 499 302 18 466 937 977 1433 3.04e-18 91.3
MS.gene00342.t1 AT2G46020 24.901 506 298 16 466 937 977 1434 5.75e-18 90.5
MS.gene00342.t1 AT2G46020 24.901 506 298 16 466 937 977 1434 5.75e-18 90.5
MS.gene00342.t1 AT2G46020 24.901 506 298 16 466 937 977 1434 5.75e-18 90.5
MS.gene00342.t1 AT5G43530 37.121 132 78 2 822 953 1126 1252 1.69e-15 82.4
MS.gene00342.t1 AT3G12810 29.577 213 126 4 805 1001 1069 1273 1.78e-15 82.4
MS.gene00342.t1 AT3G12810 29.577 213 126 4 805 1001 1073 1277 1.93e-15 82.4
MS.gene00342.t1 AT2G44980 24.390 492 312 22 470 943 51 500 5.99e-15 80.1
MS.gene00342.t1 AT1G61140 33.566 143 90 1 822 964 1122 1259 1.16e-12 73.2
MS.gene00342.t1 AT1G11100 35.246 122 74 1 822 943 971 1087 1.25e-12 72.8
MS.gene00342.t1 AT1G11100 35.246 122 74 1 822 943 927 1043 1.35e-12 72.8
MS.gene00342.t1 AT1G61140 33.813 139 87 1 822 960 964 1097 1.44e-12 72.8
MS.gene00342.t1 AT1G11100 35.246 122 74 1 822 943 1113 1229 1.47e-12 72.8
MS.gene00342.t1 AT1G11100 35.246 122 74 1 822 943 1070 1186 1.53e-12 72.8
MS.gene00342.t1 AT1G11100 35.246 122 74 1 822 943 1114 1230 1.67e-12 72.4
MS.gene00342.t1 AT3G20010 33.871 124 67 2 825 943 628 741 4.58e-11 67.4
MS.gene00342.t1 AT3G20010 33.871 124 67 2 825 943 603 716 4.99e-11 67.4
MS.gene00342.t1 AT3G20010 33.871 124 67 2 825 943 894 1007 8.61e-11 66.6
MS.gene00342.t1 AT3G20010 33.871 124 67 2 825 943 894 1007 8.61e-11 66.6
MS.gene00342.t1 AT3G20010 33.871 124 67 2 825 943 894 1007 8.61e-11 66.6

Find 192 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTTGCCTCTAAAATATT+TGG 0.125276 2.1:-55996214 MS.gene00342:CDS
CGCTTAGAGAGTGGAAAATT+TGG 0.193521 2.1:-56000982 MS.gene00342:CDS
AACCCAGAAAATGCAAATAT+TGG 0.211991 2.1:-56000929 MS.gene00342:CDS
CAGCAATTGGTTTCAAGTTT+GGG 0.234471 2.1:+55996388 None:intergenic
TCAGCAATTGGTTTCAAGTT+TGG 0.251036 2.1:+55996387 None:intergenic
ACATGAGGAAGAAGATAATA+AGG 0.284394 2.1:-55999005 MS.gene00342:CDS
TCATCTGAATCAATGATAAA+TGG 0.290481 2.1:+56000706 None:intergenic
ATGTAAAAGCCCTGTATAAA+AGG 0.296271 2.1:-55995729 MS.gene00342:intron
ATGGAAAATAAGAACGTTAC+TGG 0.297270 2.1:-56000826 MS.gene00342:CDS
ACATCATAATGTCATAGATT+TGG 0.300000 2.1:-56000797 MS.gene00342:CDS
TTTCTAGAAAGTCCATTGTT+AGG 0.301488 2.1:-55995757 MS.gene00342:CDS
AGTCTTTCACACCAGGTAAA+TGG 0.310452 2.1:+55996667 None:intergenic
GCAGGAGACTGAACTGGTTT+TGG 0.312654 2.1:+56000304 None:intergenic
GTACTGTGGTCTTCCTCTTC+TGG 0.313307 2.1:+55995889 None:intergenic
CTTGTATTGGAACTCAAATA+TGG 0.319708 2.1:+55997907 None:intergenic
TCTTTCTTTGTGTTATCATT+AGG 0.322201 2.1:+55999049 None:intergenic
TAATGTCATAGATTTGGATT+TGG 0.328783 2.1:-56000791 MS.gene00342:CDS
TTTCGAAAATGTGGTTTGAA+TGG 0.333393 2.1:-55995846 MS.gene00342:CDS
AATACTATCGACTTGGAAAA+AGG 0.333771 2.1:-55997120 MS.gene00342:CDS
GTTTCCATCTTTATAAACTT+TGG 0.336727 2.1:+55996726 None:intergenic
GGATGAAGCAGGGCGTTTAC+TGG 0.339733 2.1:+56001759 None:intergenic
ATTACAGTTATCACAGATAA+TGG 0.340357 2.1:+55996953 None:intergenic
TCTGTTACTCGTCAAGCTAT+TGG 0.341013 2.1:-55995976 MS.gene00342:CDS
TTTCCATCTTTATAAACTTT+GGG 0.344732 2.1:+55996727 None:intergenic
CTCCTAATGCGTTGGACAAT+AGG 0.350767 2.1:+55996696 None:intergenic
AAATAAGAACGTTACTGGTT+TGG 0.351586 2.1:-56000821 MS.gene00342:CDS
ATCTTCCTCATTTGAATCAA+TGG 0.354796 2.1:+56000570 None:intergenic
ATTCAAATGAGGAAGATGAT+AGG 0.367687 2.1:-56000564 MS.gene00342:CDS
TGTGAAAGACTTCTGTGATT+TGG 0.367803 2.1:-55996655 MS.gene00342:CDS
GGCAATGCAACTTCATGAAA+TGG 0.373763 2.1:+56000325 None:intergenic
CTGGCTCATGCTCCAGGATC+TGG 0.375281 2.1:-55997227 MS.gene00342:CDS
ATAGTAGTGCAGTACCTTGC+TGG 0.375718 2.1:+55996560 None:intergenic
GTTTCTTAAGCAATATATCT+TGG 0.378503 2.1:+55996910 None:intergenic
GCACACCGAAAAGGATGTTT+TGG 0.378651 2.1:-56000761 MS.gene00342:CDS
AGCTGTTATACATGATTTGC+GGG 0.378708 2.1:-55996589 MS.gene00342:CDS
GTGAGGGTATATCATTGGTT+GGG 0.379973 2.1:-55996038 MS.gene00342:CDS
AATGTTATCATTGATTCAAA+TGG 0.380062 2.1:-56000379 MS.gene00342:CDS
CAAGTCGATAGTATTCCTTT+AGG 0.381924 2.1:+55997128 None:intergenic
TCACTACATTTCTCAGCAAT+TGG 0.391419 2.1:+55996375 None:intergenic
ATCAGCTGGTGAGAAGCTTT+TGG 0.391575 2.1:-55996250 MS.gene00342:CDS
ATTCAGACGAGGAAGATGAT+AGG 0.395674 2.1:-56000462 MS.gene00342:CDS
CCGCCCAAAGTTTATAAAGA+TGG 0.396049 2.1:-55996730 MS.gene00342:CDS
TGCATTCTGGCTCATGCTCC+AGG 0.404134 2.1:-55997233 MS.gene00342:CDS
ATGTTATCATTGATTCAAAT+GGG 0.404166 2.1:-56000378 MS.gene00342:CDS
ACCCAGAAAATGCAAATATT+GGG 0.408264 2.1:-56000928 MS.gene00342:CDS
TGGAAAGGTTAGCTATGAAA+TGG 0.408305 2.1:-55996194 MS.gene00342:CDS
ATGACGGGCTAGAAGATGTT+TGG 0.408645 2.1:-55998883 MS.gene00342:CDS
TTCTAGAAAGTCCATTGTTA+GGG 0.412455 2.1:-55995756 MS.gene00342:CDS
GTTATGTTTGTCGCGTTTGT+GGG 0.414777 2.1:-55997952 MS.gene00342:CDS
ACCACGAGAGGTCGTGCATC+AGG 0.437867 2.1:+55997155 None:intergenic
TCACCCCGTCTCTCACATCT+TGG 0.439166 2.1:+55996310 None:intergenic
AGGAATTAATTTCGAAAATG+TGG 0.440301 2.1:-55995855 MS.gene00342:CDS
ATGAATGTCTTTCCAGATCC+TGG 0.441533 2.1:+55997215 None:intergenic
AACCTATTGTCCAACGCATT+AGG 0.441584 2.1:-55996698 MS.gene00342:CDS
TCATCTAAAATGAGAATTGA+CGG 0.441909 2.1:+55996888 None:intergenic
ACCTGGTGGGAGACCATCCT+GGG 0.448352 2.1:-55997259 MS.gene00342:CDS
TCTAATGCAGGAGACTGAAC+TGG 0.453819 2.1:+56000298 None:intergenic
GGTTATGTTTGTCGCGTTTG+TGG 0.457173 2.1:-55997953 MS.gene00342:CDS
CATATTTGAGTTCCAATACA+AGG 0.465416 2.1:-55997906 MS.gene00342:intron
AAAGACAAAGGTAATTATGT+TGG 0.466178 2.1:-55999031 MS.gene00342:CDS
ACCAGTGTCTAACCTTGTAT+TGG 0.466307 2.1:+55997894 None:intergenic
AACCTGGTGGGAGACCATCC+TGG 0.468533 2.1:-55997260 MS.gene00342:CDS
TCTTCATCATGATCATCTGT+TGG 0.469032 2.1:+56000649 None:intergenic
TTCTCCTCCATGGTAAGCAT+TGG 0.471176 2.1:+55999105 None:intergenic
ATGAAGTTAAGACAATAAAG+AGG 0.472373 2.1:-55996461 MS.gene00342:CDS
AAGGTACTGCACTACTATAA+AGG 0.474619 2.1:-55996555 MS.gene00342:CDS
TTCAGATGAGGAGGATGATA+AGG 0.476090 2.1:-56000692 MS.gene00342:CDS
CCCCAGGATGGTCTCCCACC+AGG 0.479756 2.1:+55997258 None:intergenic
CTTTCCGACCAGGCCAGAAA+AGG 0.480032 2.1:-55995948 MS.gene00342:CDS
CTTACAATCATTTCTAATGC+AGG 0.480541 2.1:+56000286 None:intergenic
ATTGGCCGTGCTTTCCGACC+AGG 0.480741 2.1:-55995958 MS.gene00342:CDS
AAAGCTTCTCACCAGCTGAT+TGG 0.482830 2.1:+55996253 None:intergenic
TGACAGTAGATCACAACAAT+TGG 0.483985 2.1:-55997039 MS.gene00342:CDS
AGGATCTGGAAAGACATTCA+TGG 0.485077 2.1:-55997213 MS.gene00342:CDS
TTGGTTTCAAGTTTGGGTGC+AGG 0.489269 2.1:+55996394 None:intergenic
GAACTTATATGTCTGAATCA+TGG 0.492636 2.1:-55997421 MS.gene00342:CDS
TGCCTCTAAAATATTTGGAA+AGG 0.493636 2.1:-55996209 MS.gene00342:CDS
AAATGGAAGGACAGGAGTCT+TGG 0.494932 2.1:-55996177 MS.gene00342:CDS
AGTAAACGCCCTGCTTCATC+CGG 0.495513 2.1:-56001757 MS.gene00342:intron
ACTGTTGGTATCCTAAGAAA+AGG 0.496655 2.1:+55996982 None:intergenic
ATGATAATGACTTCATGAAA+TGG 0.499153 2.1:+56000487 None:intergenic
CTAAAGGAATACTATCGACT+TGG 0.500033 2.1:-55997127 MS.gene00342:CDS
GATCTGCATGTTCTCCTCCA+TGG 0.504352 2.1:+55999095 None:intergenic
TTCATTTGCTTTGCATGTCG+AGG 0.504870 2.1:+55997320 None:intergenic
TCATAGATTTGGATTTGGAC+GGG 0.504963 2.1:-56000786 MS.gene00342:CDS
GGTGAGGGTATATCATTGGT+TGG 0.506967 2.1:-55996039 MS.gene00342:CDS
CCTCTCGTGGTGCTTCCTAA+AGG 0.507652 2.1:-55997143 MS.gene00342:CDS
TCTCCTCCATGGTAAGCATT+GGG 0.510319 2.1:+55999106 None:intergenic
GTCATAGATTTGGATTTGGA+CGG 0.511781 2.1:-56000787 MS.gene00342:CDS
TCAGGAATTTCGCCTGAAGA+AGG 0.514055 2.1:-56001069 MS.gene00342:intron
AATGTAATACCGGATGAAGC+AGG 0.517228 2.1:+56001748 None:intergenic
TAGCTATGAAATGGAAGGAC+AGG 0.517268 2.1:-55996185 MS.gene00342:CDS
GACGAGTAACAGACGGGTTG+AGG 0.521054 2.1:+55995986 None:intergenic
TAGATGAGGGACACACTCCT+AGG 0.521780 2.1:-55996872 MS.gene00342:CDS
CGAACCAAGATGTGAGAGAC+GGG 0.522137 2.1:-55996314 MS.gene00342:CDS
ATGACTTCATGAAATGGTGC+TGG 0.522586 2.1:+56000493 None:intergenic
TAGCTGTTATACATGATTTG+CGG 0.523136 2.1:-55996590 MS.gene00342:CDS
GAGGGAGATGGCAATGGCAA+TGG 0.526773 2.1:-55998861 MS.gene00342:CDS
TTATAAACTTTGGGCGGACA+AGG 0.528879 2.1:+55996736 None:intergenic
GGAGCACTCCCTTTGTTCAG+TGG 0.530923 2.1:+55996122 None:intergenic
TTCAAATGAGGAAGATGATA+GGG 0.531045 2.1:-56000563 MS.gene00342:CDS
AGAATCGTCCACTGAACAAA+GGG 0.535424 2.1:-55996130 MS.gene00342:CDS
TGTTACCATTGATTCAAATG+AGG 0.536803 2.1:-56000575 MS.gene00342:CDS
GAGGAGGATGATAAGGATCA+TGG 0.536967 2.1:-56000685 MS.gene00342:CDS
CCACAGTACTTGTGTCAAGA+AGG 0.540817 2.1:-55995875 MS.gene00342:CDS
GTATCAGTATTCTCGTTCCT+AGG 0.541700 2.1:+55996855 None:intergenic
TGAGGGTATATCATTGGTTG+GGG 0.542484 2.1:-55996037 MS.gene00342:CDS
TTCAGACGAGGAAGATGATA+GGG 0.544307 2.1:-56000461 MS.gene00342:CDS
GGACGGGGAGCACACCGAAA+AGG 0.549194 2.1:-56000770 MS.gene00342:CDS
GGATCCTACTCCTAATGCGT+TGG 0.553435 2.1:+55996688 None:intergenic
CATAGATTTGGATTTGGACG+GGG 0.557112 2.1:-56000785 MS.gene00342:CDS
TTCTATATCTGAGCATACAA+TGG 0.558790 2.1:-55996349 MS.gene00342:CDS
TGAACAAAGGGAGTGCTCCA+TGG 0.559236 2.1:-55996118 MS.gene00342:CDS
AGCTGCTGATTCTCCAGAAG+AGG 0.560162 2.1:-55995902 MS.gene00342:CDS
AAACACTTTGCAGAAGGACC+CGG 0.561229 2.1:-55996628 MS.gene00342:CDS
TATCATTGATTCAGATGAGG+AGG 0.561761 2.1:-56000701 MS.gene00342:CDS
AAAGACAAAGGTGTTTACAT+TGG 0.561970 2.1:-55998944 MS.gene00342:CDS
GTTATAAATCGCTTAGAGAG+TGG 0.562015 2.1:-56000991 MS.gene00342:CDS
TCTGGCCTGGTCGGAAAGCA+CGG 0.562735 2.1:+55995953 None:intergenic
GGTTGAAAACACTTTGCAGA+AGG 0.564686 2.1:-55996634 MS.gene00342:CDS
TTTACATCTTCCCCTAACAA+TGG 0.567105 2.1:+55995745 None:intergenic
CATGATCCCAATGCTTACCA+TGG 0.571021 2.1:-55999112 MS.gene00342:CDS
ACAGTAAAATCAACTAGGCC+AGG 0.571652 2.1:+55996513 None:intergenic
TCAATCAAAGCATGTGGTGA+GGG 0.572090 2.1:-55996054 MS.gene00342:CDS
AGATCATCCACCCGAAGAAG+AGG 0.572717 2.1:-55998023 MS.gene00342:CDS
AATAGTTGATTAGCAAGTCT+AGG 0.577621 2.1:+56000886 None:intergenic
TCCTGATGCACGACCTCTCG+TGG 0.577790 2.1:-55997156 MS.gene00342:CDS
TCAACTATTCAGAGTGGTGA+CGG 0.581469 2.1:-56000872 MS.gene00342:CDS
ACGGGCTAGAAGATGTTTGG+AGG 0.582292 2.1:-55998880 MS.gene00342:CDS
AGGTTGACACTGAAGATGAC+GGG 0.586083 2.1:-55998898 MS.gene00342:CDS
CTGAATCTATGCCAATCAGC+TGG 0.587383 2.1:-55996264 MS.gene00342:CDS
GGAGTTTCTGACATGGCAAG+TGG 0.588515 2.1:-55997099 MS.gene00342:CDS
CGGGCTAGAAGATGTTTGGA+GGG 0.589781 2.1:-55998879 MS.gene00342:CDS
GAAAATTGAATCCTTCGACT+TGG 0.592086 2.1:+55997291 None:intergenic
AGAAGATGTTTGGAGGGAGA+TGG 0.593018 2.1:-55998873 MS.gene00342:CDS
TTGTCCAACGCATTAGGAGT+AGG 0.597875 2.1:-55996692 MS.gene00342:CDS
TAGGAACGAGAATACTGATA+CGG 0.598994 2.1:-55996853 MS.gene00342:CDS
AAGGTTAGCTATGAAATGGA+AGG 0.600529 2.1:-55996190 MS.gene00342:CDS
GAGAATCGTCCACTGAACAA+AGG 0.601522 2.1:-55996131 MS.gene00342:CDS
ATGTGGTGAGGGTATATCAT+TGG 0.601963 2.1:-55996043 MS.gene00342:CDS
ATGAAACCGCACCAAGTCGA+AGG 0.602444 2.1:-55997302 MS.gene00342:CDS
AGATAATGGACGAAAACTGT+TGG 0.602446 2.1:+55996967 None:intergenic
AAGGTTGACACTGAAGATGA+CGG 0.603475 2.1:-55998899 MS.gene00342:CDS
AGGAGTAGGATCCATTTACC+TGG 0.603942 2.1:-55996678 MS.gene00342:CDS
ATGTAATACCGGATGAAGCA+GGG 0.604945 2.1:+56001749 None:intergenic
TGAAGTTAAGACAATAAAGA+GGG 0.605026 2.1:-55996460 MS.gene00342:CDS
TGTTTACATTGGTGTACATG+AGG 0.605749 2.1:-55998933 MS.gene00342:CDS
ATTTATCATTGATTCAGATG+AGG 0.606144 2.1:-56000704 MS.gene00342:CDS
TTGAATCCTTCGACTTGGTG+CGG 0.606513 2.1:+55997296 None:intergenic
GGAAGTCTTAAAACAGTGGG+TGG 0.608781 2.1:-55997018 MS.gene00342:CDS
AGTTGAGACAGTTGATGTGA+AGG 0.609517 2.1:-55995794 MS.gene00342:CDS
TTTATATCAAAATCATGTCA+AGG 0.609653 2.1:-55996778 MS.gene00342:CDS
TAATTATGTTGGAGTACATG+AGG 0.612315 2.1:-55999020 MS.gene00342:CDS
TTTGGGTCAATCAAAGCATG+TGG 0.612350 2.1:-55996060 MS.gene00342:CDS
ATTGGAAGTCTTAAAACAGT+GGG 0.613903 2.1:-55997021 MS.gene00342:CDS
AAGTTCAAGATGTCTTCTGT+AGG 0.616210 2.1:-55996429 MS.gene00342:CDS
GTTTGTGGGGTTATTGACAG+AGG 0.616734 2.1:-55997938 MS.gene00342:CDS
GCGAACCAAGATGTGAGAGA+CGG 0.616830 2.1:-55996315 MS.gene00342:CDS
GTCAATCAAAGCATGTGGTG+AGG 0.617648 2.1:-55996055 MS.gene00342:CDS
TGTTATCATTGATTCAAATG+GGG 0.619334 2.1:-56000377 MS.gene00342:CDS
ACAGTTGATGTGAAGGAATG+TGG 0.620738 2.1:-55995787 MS.gene00342:CDS
TGATGAAGAAACTCCCAACA+TGG 0.622428 2.1:-56000434 MS.gene00342:CDS
TGATGAAGAAACTCCCAACA+TGG 0.622428 2.1:-56000845 MS.gene00342:CDS
TTTGAATGGAATGAATATTG+TGG 0.623573 2.1:-55995832 MS.gene00342:CDS
CCATCTTTATAAACTTTGGG+CGG 0.625396 2.1:+55996730 None:intergenic
GCACCACAGTAAAATCAACT+AGG 0.627117 2.1:+55996508 None:intergenic
TAGCTTGACGAGTAACAGAC+GGG 0.631651 2.1:+55995980 None:intergenic
TCACAGAAGTCTTTCACACC+AGG 0.631873 2.1:+55996660 None:intergenic
GATAACACAAAGAAAGACAA+AGG 0.636337 2.1:-55998956 MS.gene00342:CDS
TTTCTTGTCAGAAACCTGGT+GGG 0.638542 2.1:-55997272 MS.gene00342:CDS
ACATCACCATGTGTTAAACA+TGG 0.639224 2.1:+56001012 None:intergenic
GATAACACAAAGAAAGACAA+AGG 0.642384 2.1:-55999043 MS.gene00342:CDS
AATTGGAAGTCTTAAAACAG+TGG 0.644070 2.1:-55997022 MS.gene00342:CDS
CCTTTAGGAAGCACCACGAG+AGG 0.646282 2.1:+55997143 None:intergenic
ATAGCTTGACGAGTAACAGA+CGG 0.650423 2.1:+55995979 None:intergenic
GATCCCAATGCTTACCATGG+AGG 0.651668 2.1:-55999109 MS.gene00342:CDS
TGAAGCAGGGCGTTTACTGG+AGG 0.656942 2.1:+56001762 None:intergenic
CATTATCATCGATTCAGACG+AGG 0.657741 2.1:-56000473 MS.gene00342:CDS
TGTTTGGAGGGAGATGGCAA+TGG 0.662485 2.1:-55998867 MS.gene00342:CDS
ACATGAGGAAGAAGATAACA+AGG 0.662860 2.1:-55998918 MS.gene00342:CDS
TTATGTTTGTCGCGTTTGTG+GGG 0.662905 2.1:-55997951 MS.gene00342:CDS
CCTGGTGGGAGACCATCCTG+GGG 0.668528 2.1:-55997258 MS.gene00342:CDS
CCTTCTTGACACAAGTACTG+TGG 0.673674 2.1:+55995875 None:intergenic
ACTTCATGAAATGGTGCTGG+AGG 0.677441 2.1:+56000496 None:intergenic
AAAATTCAACAATTCACCCG+AGG 0.695204 2.1:-55996094 MS.gene00342:CDS
AGCTTGCCATGTTTAACACA+TGG 0.699668 2.1:-56001018 MS.gene00342:CDS
TGCTAATCAACTATTCAGAG+TGG 0.701124 2.1:-56000878 MS.gene00342:CDS
TCTAGAAAGTCCATTGTTAG+GGG 0.705989 2.1:-55995755 MS.gene00342:CDS
CTGGTGGGAGACCATCCTGG+GGG 0.719970 2.1:-55997257 MS.gene00342:CDS
TTTGCGGGAGATGACCAGCA+AGG 0.730371 2.1:-55996574 MS.gene00342:CDS
GAACCAAGATGTGAGAGACG+GGG 0.738263 2.1:-55996313 MS.gene00342:CDS
ATATCAAAATCATGTCAAGG+AGG 0.742826 2.1:-55996775 MS.gene00342:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAATAAATAAAAAAAA+TGG - chr2.1:55997854-55997873 MS.gene00342:intron 0.0%
!! AAAAAAAAAAAAATCCTTAA+TGG - chr2.1:55996267-55996286 MS.gene00342:CDS 10.0%
!! ACATATTAAAGTAAAAAATA+AGG + chr2.1:55997336-55997355 None:intergenic 10.0%
!! AAAAAATATATATTGATCCA+TGG + chr2.1:55995882-55995901 None:intergenic 15.0%
!! AATAAAAAAAATGGATATTG+TGG - chr2.1:55997863-55997882 MS.gene00342:intron 15.0%
!! AATGTATAACTTATCATTAT+AGG - chr2.1:55997502-55997521 MS.gene00342:intron 15.0%
!! AATTATAGATTGGAAAATAT+TGG - chr2.1:55997831-55997850 MS.gene00342:intron 15.0%
!! ATACAAATAAAACAAGAATT+AGG + chr2.1:56001761-56001780 None:intergenic 15.0%
!! TAAAATAATTTCTATGCATA+TGG - chr2.1:55999143-55999162 MS.gene00342:intron 15.0%
!! TCATTAACAGATATATATTA+AGG + chr2.1:55998695-55998714 None:intergenic 15.0%
!! TTACTTTAATATGTATAAAG+TGG - chr2.1:55997342-55997361 MS.gene00342:CDS 15.0%
!!! AAAGAAATTTTTGTAATATC+AGG - chr2.1:56001248-56001267 MS.gene00342:intron 15.0%
!! AAAGAAAAAGCTGATATATT+TGG - chr2.1:56000009-56000028 MS.gene00342:intron 20.0%
!! AAATATGCATTACATTAACT+AGG + chr2.1:55998968-55998987 None:intergenic 20.0%
!! AACATGTTTGGAAAAATAAA+TGG + chr2.1:55998000-55998019 None:intergenic 20.0%
!! AACCTTCAATAAAATTGATA+CGG + chr2.1:55999947-55999966 None:intergenic 20.0%
!! AATACATGAATAAGAACAAA+TGG + chr2.1:55996212-55996231 None:intergenic 20.0%
!! AATTTAGTCTGACATATATT+TGG - chr2.1:55997396-55997415 MS.gene00342:CDS 20.0%
!! AGTGAAAAGAAAAGAAAAAA+AGG + chr2.1:55998133-55998152 None:intergenic 20.0%
!! GAAATAATATGAAGAAAAAC+AGG + chr2.1:55998659-55998678 None:intergenic 20.0%
!! TAAAATGAAGTACAATAGTT+CGG + chr2.1:55997211-55997230 None:intergenic 20.0%
!! TACAAAAAATTATGTAACAG+TGG + chr2.1:56001703-56001722 None:intergenic 20.0%
!! TAGTTATGCAAATTATAGAT+TGG - chr2.1:55997821-55997840 MS.gene00342:intron 20.0%
!! TGTCTTAAAATTAGATTCAT+AGG - chr2.1:55999606-55999625 MS.gene00342:intron 20.0%
!! TTTATATCAAAATCATGTCA+AGG - chr2.1:56000623-56000642 MS.gene00342:CDS 20.0%
!! TTTCCATCTTTATAAACTTT+GGG + chr2.1:56000677-56000696 None:intergenic 20.0%
!!! AAATATATCAGCTTTTTCTT+TGG + chr2.1:56000010-56000029 None:intergenic 20.0%
!!! AACTTTATCATTTCATTTTC+AGG + chr2.1:55996138-55996157 None:intergenic 20.0%
!!! AATGTTATCATTGATTCAAA+TGG - chr2.1:55997022-55997041 MS.gene00342:CDS 20.0%
!!! AGCTAAAAACAATGATTTTA+GGG - chr2.1:55995713-55995732 MS.gene00342:intron 20.0%
!!! ATCAATGATAACATTTTGAT+CGG + chr2.1:55997017-55997036 None:intergenic 20.0%
!!! ATGTTATCATTGATTCAAAT+GGG - chr2.1:55997023-55997042 MS.gene00342:CDS 20.0%
!!! CTCTTACAATATAAATTTTC+TGG - chr2.1:55997783-55997802 MS.gene00342:intron 20.0%
!!! CTTTTTTTTAGAAATGTGTT+TGG - chr2.1:55995989-55996008 MS.gene00342:CDS 20.0%
!!! TAGCTAAAAACAATGATTTT+AGG - chr2.1:55995712-55995731 MS.gene00342:intron 20.0%
!!! TTGTTTTATTTGTATTTGTC+AGG - chr2.1:56001766-56001785 MS.gene00342:CDS 20.0%
! AAAGACAAAGGTAATTATGT+TGG - chr2.1:55998370-55998389 MS.gene00342:intron 25.0%
! AAATGATAAAATGGCACATT+AGG - chr2.1:55999825-55999844 MS.gene00342:intron 25.0%
! AACTTATCATTATAGGTCTT+TGG - chr2.1:55997509-55997528 MS.gene00342:intron 25.0%
! ACACTGTAAAAATCATAAAG+TGG + chr2.1:56000336-56000355 None:intergenic 25.0%
! ACAGAATCTCTTATAGTTTA+TGG - chr2.1:55999695-55999714 MS.gene00342:intron 25.0%
! ACATCATAATGTCATAGATT+TGG - chr2.1:55996604-55996623 MS.gene00342:CDS 25.0%
! ACCAAACCAAAATGATAAAA+TGG - chr2.1:55999816-55999835 MS.gene00342:intron 25.0%
! AGGAATTAATTTCGAAAATG+TGG - chr2.1:56001546-56001565 MS.gene00342:intron 25.0%
! ATATCAAATGATTACCAAGT+TGG + chr2.1:55997754-55997773 None:intergenic 25.0%
! ATCATAATTCAGAAGATTTC+AGG + chr2.1:55999006-55999025 None:intergenic 25.0%
! ATGAAGTTAAGACAATAAAG+AGG - chr2.1:56000940-56000959 MS.gene00342:CDS 25.0%
! ATTACAGTTATCACAGATAA+TGG + chr2.1:56000451-56000470 None:intergenic 25.0%
! CAAGATACTAATATCCATTA+AGG + chr2.1:55996284-55996303 None:intergenic 25.0%
! GTTCGATAGTAACAAAAAAA+GGG + chr2.1:55996017-55996036 None:intergenic 25.0%
! GTTTCCATCTTTATAAACTT+TGG + chr2.1:56000678-56000697 None:intergenic 25.0%
! GTTTCTTAAGCAATATATCT+TGG + chr2.1:56000494-56000513 None:intergenic 25.0%
! TAATACAAAGAATCTTACCA+AGG + chr2.1:55998070-55998089 None:intergenic 25.0%
! TAATGTCATAGATTTGGATT+TGG - chr2.1:55996610-55996629 MS.gene00342:CDS 25.0%
! TATCAAATGATTACCAAGTT+GGG + chr2.1:55997753-55997772 None:intergenic 25.0%
! TCATCTGAATCAATGATAAA+TGG + chr2.1:55996698-55996717 None:intergenic 25.0%
! TCGAAATAATCTGTAACAAA+CGG - chr2.1:55995823-55995842 MS.gene00342:CDS 25.0%
! TCTTTCTTTGTGTTATCATT+AGG + chr2.1:55998355-55998374 None:intergenic 25.0%
! TGAAGTTAAGACAATAAAGA+GGG - chr2.1:56000941-56000960 MS.gene00342:CDS 25.0%
! TTAAACTAAATCAATCCCAA+AGG + chr2.1:55999332-55999351 None:intergenic 25.0%
! TTGGTAAGATTCTTTGTATT+AGG - chr2.1:55998069-55998088 MS.gene00342:intron 25.0%
! TTTAAACACACCTTTCATTT+GGG - chr2.1:55997160-55997179 MS.gene00342:CDS 25.0%
! TTTGAATGGAATGAATATTG+TGG - chr2.1:56001569-56001588 MS.gene00342:intron 25.0%
!! AACTGTATTTGTAACTTGTA+AGG - chr2.1:55995966-55995985 MS.gene00342:CDS 25.0%
!! AATCAATGGTAACATTTTGA+TGG + chr2.1:55996820-55996839 None:intergenic 25.0%
!! ATGATAATGACTTCATGAAA+TGG + chr2.1:55996917-55996936 None:intergenic 25.0%
!! ATTTTCCTTATGAAAACAAG+GGG - chr2.1:55998729-55998748 MS.gene00342:intron 25.0%
!! CATTTTCCTTATGAAAACAA+GGG - chr2.1:55998728-55998747 MS.gene00342:intron 25.0%
!! GGATCAAAAAAAGGATATTT+TGG - chr2.1:55996859-55996878 MS.gene00342:CDS 25.0%
!! TACCGTATCAATTTTATTGA+AGG - chr2.1:55999942-55999961 MS.gene00342:intron 25.0%
!! TATTTTTCCAAACATGTTGT+AGG - chr2.1:55998002-55998021 MS.gene00342:CDS 25.0%
!! TCAATTCTCATTTTAGATGA+GGG - chr2.1:56000516-56000535 MS.gene00342:CDS 25.0%
!! TCATCTAAAATGAGAATTGA+CGG + chr2.1:56000516-56000535 None:intergenic 25.0%
!! TGAATTGTTGAATTTTTCCA+TGG + chr2.1:56001303-56001322 None:intergenic 25.0%
!! TTATGATTTTTACAGTGTGA+AGG - chr2.1:56000338-56000357 MS.gene00342:CDS 25.0%
!!! AACCTTTCCAAATATTTTAG+AGG + chr2.1:56001197-56001216 None:intergenic 25.0%
!!! AACTTTTTCATTTTCCATGT+TGG + chr2.1:55996984-55997003 None:intergenic 25.0%
!!! AATGTGCCATTTTATCATTT+TGG + chr2.1:55999825-55999844 None:intergenic 25.0%
!!! ACATTTCATTTTCTGAAATC+AGG - chr2.1:55996314-55996333 MS.gene00342:CDS 25.0%
!!! ACTTTTTCATTTTCCATGTT+GGG + chr2.1:55996983-55997002 None:intergenic 25.0%
!!! ATCAATGGTAACATTTTGAT+GGG + chr2.1:55996819-55996838 None:intergenic 25.0%
!!! ATGATTTTGATATAAAGTCC+CGG + chr2.1:56000619-56000638 None:intergenic 25.0%
!!! ATTTATCATTGATTCAGATG+AGG - chr2.1:55996697-55996716 MS.gene00342:CDS 25.0%
!!! TGTTATCATTGATTCAAATG+GGG - chr2.1:55997024-55997043 MS.gene00342:CDS 25.0%
!!! TTCATTTTAAAAGACGATCT+TGG - chr2.1:55999427-55999446 MS.gene00342:intron 25.0%
AAAAGTTCCTACAACATGTT+TGG + chr2.1:55998012-55998031 None:intergenic 30.0%
AACCCAGAAAATGCAAATAT+TGG - chr2.1:55996472-55996491 MS.gene00342:CDS 30.0%
AATAGTTGATTAGCAAGTCT+AGG + chr2.1:55996518-55996537 None:intergenic 30.0%
AATTGGAAGTCTTAAAACAG+TGG - chr2.1:56000379-56000398 MS.gene00342:CDS 30.0%
ACATGAGGAAGAAGATAATA+AGG - chr2.1:55998396-55998415 MS.gene00342:intron 30.0%
ACCCAGAAAATGCAAATATT+GGG - chr2.1:55996473-55996492 MS.gene00342:CDS 30.0%
AGAATGGAAGAATGTAATAC+CGG + chr2.1:55995666-55995685 None:intergenic 30.0%
AGATGATAGGGATCAAAAAA+AGG - chr2.1:55996850-55996869 MS.gene00342:CDS 30.0%
AGTTTAAATGTACTCCTACT+AGG - chr2.1:55999345-55999364 MS.gene00342:intron 30.0%
ATATATTGATCCATGGACAA+TGG + chr2.1:55995875-55995894 None:intergenic 30.0%
ATATCAAAATCATGTCAAGG+AGG - chr2.1:56000626-56000645 MS.gene00342:CDS 30.0%
ATCTTCCTCATTTGAATCAA+TGG + chr2.1:55996834-55996853 None:intergenic 30.0%
ATGGAAAATAAGAACGTTAC+TGG - chr2.1:55996575-55996594 MS.gene00342:CDS 30.0%
ATGTAAAAGCCCTGTATAAA+AGG - chr2.1:56001672-56001691 MS.gene00342:intron 30.0%
ATGTATAAAGTGGAATCTTC+TGG - chr2.1:55997352-55997371 MS.gene00342:CDS 30.0%
ATTATCTCTTAGAGTTCCTT+TGG - chr2.1:55999313-55999332 MS.gene00342:intron 30.0%
ATTCAAATGAGGAAGATGAT+AGG - chr2.1:55996837-55996856 MS.gene00342:CDS 30.0%
ATTGGAAGTCTTAAAACAGT+GGG - chr2.1:56000380-56000399 MS.gene00342:CDS 30.0%
CGAAATAATCTGTAACAAAC+GGG - chr2.1:55995824-55995843 MS.gene00342:CDS 30.0%
CTAAATGAAGCCGATAAAAA+TGG + chr2.1:55998910-55998929 None:intergenic 30.0%
CTAAGAGAAATCCAACATTT+AGG + chr2.1:55997589-55997608 None:intergenic 30.0%
CTCTTATAGTTTATGGTTTC+AGG - chr2.1:55999702-55999721 MS.gene00342:intron 30.0%
CTGAACGATGAACAATATAT+GGG - chr2.1:55997969-55997988 MS.gene00342:CDS 30.0%
CTGTGCAAAAATGCTTTATA+GGG - chr2.1:55998262-55998281 MS.gene00342:intron 30.0%
CTTACAATCATTTCTAATGC+AGG + chr2.1:55997118-55997137 None:intergenic 30.0%
CTTGTATTGGAACTCAAATA+TGG + chr2.1:55999497-55999516 None:intergenic 30.0%
CTTTAAACACACCTTTCATT+TGG - chr2.1:55997159-55997178 MS.gene00342:CDS 30.0%
GAACTTATATGTCTGAATCA+TGG - chr2.1:55999980-55999999 MS.gene00342:intron 30.0%
GATAACACAAAGAAAGACAA+AGG - chr2.1:55998358-55998377 MS.gene00342:intron 30.0%
GCAAAAAGAAAGAGAAAGAA+TGG + chr2.1:55995682-55995701 None:intergenic 30.0%
GGTTCGATAGTAACAAAAAA+AGG + chr2.1:55996018-55996037 None:intergenic 30.0%
GTCAGACTAAATTATATCTC+TGG + chr2.1:55997389-55997408 None:intergenic 30.0%
TAATTATGTTGGAGTACATG+AGG - chr2.1:55998381-55998400 MS.gene00342:intron 30.0%
TAGCTGTTATACATGATTTG+CGG - chr2.1:56000811-56000830 MS.gene00342:CDS 30.0%
TAGTCTGACATATATTTGGA+AGG - chr2.1:55997400-55997419 MS.gene00342:CDS 30.0%
TCAAGTTACATGCATATAAC+AGG + chr2.1:55999077-55999096 None:intergenic 30.0%
TCATAGGAGTAAAGGAAAAA+AGG + chr2.1:55997926-55997945 None:intergenic 30.0%
TCTGTGCAAAAATGCTTTAT+AGG - chr2.1:55998261-55998280 MS.gene00342:intron 30.0%
TGAACGATGAACAATATATG+GGG - chr2.1:55997970-55997989 MS.gene00342:CDS 30.0%
TGCATTACATTAACTAGGTA+TGG + chr2.1:55998963-55998982 None:intergenic 30.0%
TTAGTCTCGAAATGAAATGA+GGG - chr2.1:55996165-55996184 MS.gene00342:CDS 30.0%
TTATCTCTTAGAGTTCCTTT+GGG - chr2.1:55999314-55999333 MS.gene00342:intron 30.0%
TTATTGCATAGCCTAAATGT+TGG - chr2.1:55997575-55997594 MS.gene00342:intron 30.0%
TTCAAATGAGGAAGATGATA+GGG - chr2.1:55996838-55996857 MS.gene00342:CDS 30.0%
TTCTATATCTGAGCATACAA+TGG - chr2.1:56001052-56001071 MS.gene00342:CDS 30.0%
TTTAAAGGATTGCAAAAGCA+GGG + chr2.1:55997146-55997165 None:intergenic 30.0%
TTTCGAAAATGTGGTTTGAA+TGG - chr2.1:56001555-56001574 MS.gene00342:intron 30.0%
! AAATAAGAACGTTACTGGTT+TGG - chr2.1:55996580-55996599 MS.gene00342:CDS 30.0%
! AACATTCTTTTTCCCACTTT+GGG + chr2.1:55998204-55998223 None:intergenic 30.0%
! ATAGGTTGAATGTTTCAACA+TGG - chr2.1:55999624-55999643 MS.gene00342:intron 30.0%
! ATTAGGACATTTTATGGCAT+GGG - chr2.1:55999842-55999861 MS.gene00342:intron 30.0%
! CAAATGAAAGGTGTGTTTAA+AGG + chr2.1:55997161-55997180 None:intergenic 30.0%
! CATATTTGAGTTCCAATACA+AGG - chr2.1:55999495-55999514 MS.gene00342:intron 30.0%
! GATTGACCCAAAAAAGATTT+TGG + chr2.1:56001333-56001352 None:intergenic 30.0%
! GCATTTTCCTTATGAAAACA+AGG - chr2.1:55998727-55998746 MS.gene00342:intron 30.0%
! GGAACATTGTTTTCTCTTTT+CGG + chr2.1:55996887-55996906 None:intergenic 30.0%
! GTACTTCATTTTACCATTTG+TGG - chr2.1:55997218-55997237 MS.gene00342:CDS 30.0%
! GTCAATTCTCATTTTAGATG+AGG - chr2.1:56000515-56000534 MS.gene00342:CDS 30.0%
! GTTTGTTACAGATTATTTCG+AGG + chr2.1:55995824-55995843 None:intergenic 30.0%
! TAACATTCTTTTTCCCACTT+TGG + chr2.1:55998205-55998224 None:intergenic 30.0%
! TAGGACATTTTGCAAAGTAA+GGG + chr2.1:55996499-55996518 None:intergenic 30.0%
! TAGGTTGAATGTTTCAACAT+GGG - chr2.1:55999625-55999644 MS.gene00342:intron 30.0%
! TTAACTTCATGCTTTTGTCT+GGG + chr2.1:56000930-56000949 None:intergenic 30.0%
! TTCTAGAAAGTCCATTGTTA+GGG - chr2.1:56001645-56001664 MS.gene00342:intron 30.0%
! TTTCTAGAAAGTCCATTGTT+AGG - chr2.1:56001644-56001663 MS.gene00342:intron 30.0%
! TTTGCATTTTCTGGGTTATA+AGG + chr2.1:55996469-55996488 None:intergenic 30.0%
! TTTTCCTTATGAAAACAAGG+GGG - chr2.1:55998730-55998749 MS.gene00342:intron 30.0%
!! AAAGACAAAGGTGTTTACAT+TGG - chr2.1:55998457-55998476 MS.gene00342:intron 30.0%
!! AATACTATCGACTTGGAAAA+AGG - chr2.1:56000281-56000300 MS.gene00342:intron 30.0%
!! AATTTGACTTTAAGAGCATC+AGG - chr2.1:55999167-55999186 MS.gene00342:intron 30.0%
!! ATTTTGATGTTCACTGAGAA+TGG - chr2.1:55998879-55998898 MS.gene00342:CDS 30.0%
!! GCTTGTTTGGTCTTAAATAT+TGG - chr2.1:55999542-55999561 MS.gene00342:intron 30.0%
!! TATCGGCTTCATTTAGTATA+GGG - chr2.1:55998914-55998933 MS.gene00342:CDS 30.0%
!! TCTCTTGCCTCTAAAATATT+TGG - chr2.1:56001187-56001206 MS.gene00342:intron 30.0%
!! TGCCTCTAAAATATTTGGAA+AGG - chr2.1:56001192-56001211 MS.gene00342:intron 30.0%
!! TGTTACCATTGATTCAAATG+AGG - chr2.1:55996826-55996845 MS.gene00342:CDS 30.0%
!! TTATCGGCTTCATTTAGTAT+AGG - chr2.1:55998913-55998932 MS.gene00342:CDS 30.0%
!! TTGTAGGAACTTTTTCCATA+GGG - chr2.1:55998018-55998037 MS.gene00342:CDS 30.0%
!! TTTCAGATTGCTTAGTTTTC+TGG - chr2.1:55996230-55996249 MS.gene00342:CDS 30.0%
!!! AACAAGAGTATCCTTTTCTT+AGG - chr2.1:56000408-56000427 MS.gene00342:CDS 30.0%
!!! AACGTTCTTATTTTCCATGT+TGG + chr2.1:55996573-55996592 None:intergenic 30.0%
!!! ACGTTCTTATTTTCCATGTT+GGG + chr2.1:55996572-55996591 None:intergenic 30.0%
!!! AGCTTTTTCACTTTCAATGT+AGG + chr2.1:55996783-55996802 None:intergenic 30.0%
!!! ATCATTTTGGTTTGGTAAAG+AGG + chr2.1:55999812-55999831 None:intergenic 30.0%
!!! CTACTTTCCTTTTAAAATCC+GGG + chr2.1:56000794-56000813 None:intergenic 30.0%
!!! GCCATTTTATCATTTTGGTT+TGG + chr2.1:55999820-55999839 None:intergenic 30.0%
!!! GCTACTTTCCTTTTAAAATC+CGG + chr2.1:56000795-56000814 None:intergenic 30.0%
!!! GCTTTTTCACTTTCAATGTA+GGG + chr2.1:55996782-55996801 None:intergenic 30.0%
!!! TAGGGAGAATCACATTTTTT+AGG - chr2.1:55995731-55995750 MS.gene00342:CDS 30.0%
!!! TTTTTTCCTTTACTCCTATG+AGG - chr2.1:55997925-55997944 MS.gene00342:CDS 30.0%
AAAAACAGGTTACAAACGAG+TGG + chr2.1:55998645-55998664 None:intergenic 35.0%
AAAACAGGTTACAAACGAGT+GGG + chr2.1:55998644-55998663 None:intergenic 35.0%
AAAATTCAACAATTCACCCG+AGG - chr2.1:56001307-56001326 MS.gene00342:intron 35.0%
AAGGATACAACCCAAATGAA+AGG + chr2.1:55997173-55997192 None:intergenic 35.0%
AAGTTCAAGATGTCTTCTGT+AGG - chr2.1:56000972-56000991 MS.gene00342:CDS 35.0%
ACAATTTCCTCACGAAAACA+TGG + chr2.1:55995919-55995938 None:intergenic 35.0%
ACATCACCATGTGTTAAACA+TGG + chr2.1:55996392-55996411 None:intergenic 35.0%
ACATGAGGAAGAAGATAACA+AGG - chr2.1:55998483-55998502 MS.gene00342:intron 35.0%
ACTGTTGGTATCCTAAGAAA+AGG + chr2.1:56000422-56000441 None:intergenic 35.0%
AGGAGTAAAGGAAAAAAGGA+AGG + chr2.1:55997922-55997941 None:intergenic 35.0%
AGTAAAACGCTCATCAAAGA+AGG + chr2.1:55998817-55998836 None:intergenic 35.0%
AGTGAAACTTGACAGTAGAA+TGG + chr2.1:55997699-55997718 None:intergenic 35.0%
AGTTAAATCACCATTGTCCA+TGG - chr2.1:55995862-55995881 MS.gene00342:CDS 35.0%
ATGAGCATTAACAATCCCTA+TGG + chr2.1:55998036-55998055 None:intergenic 35.0%
CAAGTCGATAGTATTCCTTT+AGG + chr2.1:56000276-56000295 None:intergenic 35.0%
CCATCTTTATAAACTTTGGG+CGG + chr2.1:56000674-56000693 None:intergenic 35.0%
GAAAATTGAATCCTTCGACT+TGG + chr2.1:56000113-56000132 None:intergenic 35.0%
GCTCATAAATCTAGATTCCT+TGG - chr2.1:55998050-55998069 MS.gene00342:intron 35.0%
GCTGAACGATGAACAATATA+TGG - chr2.1:55997968-55997987 MS.gene00342:CDS 35.0%
GTCATAGATTTGGATTTGGA+CGG - chr2.1:55996614-55996633 MS.gene00342:CDS 35.0%
GTTATAAATCGCTTAGAGAG+TGG - chr2.1:55996410-55996429 MS.gene00342:CDS 35.0%
GTTTAAAGGATTGCAAAAGC+AGG + chr2.1:55997147-55997166 None:intergenic 35.0%
TAAGGAAAATGCTCTGTCTT+AGG + chr2.1:55998719-55998738 None:intergenic 35.0%
TAGGAACGAGAATACTGATA+CGG - chr2.1:56000548-56000567 MS.gene00342:CDS 35.0%
TAGTCTCGAAATGAAATGAG+GGG - chr2.1:55996166-55996185 MS.gene00342:CDS 35.0%
TATGAAAACAAGGGGGAAAT+GGG - chr2.1:55998737-55998756 MS.gene00342:intron 35.0%
TCACTACATTTCTCAGCAAT+TGG + chr2.1:56001029-56001048 None:intergenic 35.0%
TCATAGATTTGGATTTGGAC+GGG - chr2.1:55996615-55996634 MS.gene00342:CDS 35.0%
TCTAGAAAGTCCATTGTTAG+GGG - chr2.1:56001646-56001665 MS.gene00342:intron 35.0%
TCTCTGCATTAATGCTTGTT+TGG - chr2.1:55999529-55999548 MS.gene00342:intron 35.0%
TCTTCATCATGATCATCTGT+TGG + chr2.1:55996755-55996774 None:intergenic 35.0%
TGACAGTAGATCACAACAAT+TGG - chr2.1:56000362-56000381 MS.gene00342:CDS 35.0%
TGCTAATCAACTATTCAGAG+TGG - chr2.1:55996523-55996542 MS.gene00342:CDS 35.0%
TGTGAAAGACTTCTGTGATT+TGG - chr2.1:56000746-56000765 MS.gene00342:CDS 35.0%
TGTTTACATTGGTGTACATG+AGG - chr2.1:55998468-55998487 MS.gene00342:intron 35.0%
TTATGAAAACAAGGGGGAAA+TGG - chr2.1:55998736-55998755 MS.gene00342:intron 35.0%
TTTACATCTTCCCCTAACAA+TGG + chr2.1:56001659-56001678 None:intergenic 35.0%
! AAGGTTAGCTATGAAATGGA+AGG - chr2.1:56001211-56001230 MS.gene00342:intron 35.0%
! ACACAAACACTTTCCTTTTC+TGG + chr2.1:56001469-56001488 None:intergenic 35.0%
! ACATTCTTTTTCCCACTTTG+GGG + chr2.1:55998203-55998222 None:intergenic 35.0%
! AGCTGTTATACATGATTTGC+GGG - chr2.1:56000812-56000831 MS.gene00342:CDS 35.0%
! AGTGGTCTAACCTTTTATAC+AGG + chr2.1:56001685-56001704 None:intergenic 35.0%
! CAATTTTCTTGTCAGAAACC+TGG - chr2.1:56000125-56000144 MS.gene00342:intron 35.0%
! CATTAGGACATTTTATGGCA+TGG - chr2.1:55999841-55999860 MS.gene00342:intron 35.0%
! CTAAAGGAATACTATCGACT+TGG - chr2.1:56000274-56000293 MS.gene00342:intron 35.0%
! CTAGGACATTTTGCAAAGTA+AGG + chr2.1:55996500-55996519 None:intergenic 35.0%
! CTTAACTTCATGCTTTTGTC+TGG + chr2.1:56000931-56000950 None:intergenic 35.0%
! CTTCATTTTACCATTTGTGG+CGG - chr2.1:55997221-55997240 MS.gene00342:CDS 35.0%
! GCCCAATATTTGCATTTTCT+GGG + chr2.1:55996477-55996496 None:intergenic 35.0%
! GTGACATTGTATCCTCTTTT+TGG + chr2.1:55996668-55996687 None:intergenic 35.0%
! GTGGTCTAACCTTTTATACA+GGG + chr2.1:56001684-56001703 None:intergenic 35.0%
! GTTAGTCTCGAAATGAAATG+AGG - chr2.1:55996164-55996183 MS.gene00342:CDS 35.0%
! TACCTCTTTTGTGGGAAAAA+TGG - chr2.1:55999725-55999744 MS.gene00342:intron 35.0%
! TGGAAAGGTTAGCTATGAAA+TGG - chr2.1:56001207-56001226 MS.gene00342:intron 35.0%
! TGGCACATTAGGACATTTTA+TGG - chr2.1:55999836-55999855 MS.gene00342:intron 35.0%
!! AAGGTACTGCACTACTATAA+AGG - chr2.1:56000846-56000865 MS.gene00342:CDS 35.0%
!! AATGGCCTGTCCATTTTTAT+CGG - chr2.1:55998897-55998916 MS.gene00342:CDS 35.0%
!! ACTATCGAACCTTTTCTAGT+AGG - chr2.1:55996027-55996046 MS.gene00342:CDS 35.0%
!! AGATAATGGACGAAAACTGT+TGG + chr2.1:56000437-56000456 None:intergenic 35.0%
!! ATTTGGGTTGTATCCTTCTT+GGG - chr2.1:55997176-55997195 MS.gene00342:CDS 35.0%
!! CAAGAAAAGTTGTTTTGTCC+GGG - chr2.1:56000598-56000617 MS.gene00342:CDS 35.0%
!! CAGCAATTGGTTTCAAGTTT+GGG + chr2.1:56001016-56001035 None:intergenic 35.0%
!! CCAAGAAAAGTTGTTTTGTC+CGG - chr2.1:56000597-56000616 MS.gene00342:CDS 35.0%
!! CTATCGAACCTTTTCTAGTA+GGG - chr2.1:55996028-55996047 MS.gene00342:CDS 35.0%
!! GTTGTAGGAACTTTTTCCAT+AGG - chr2.1:55998017-55998036 MS.gene00342:CDS 35.0%
!! TATCATTGATTCAGATGAGG+AGG - chr2.1:55996700-55996719 MS.gene00342:CDS 35.0%
!! TCAGCAATTGGTTTCAAGTT+TGG + chr2.1:56001017-56001036 None:intergenic 35.0%
!! TTTAAGAGCATCAGGAATGT+TGG - chr2.1:55999175-55999194 MS.gene00342:intron 35.0%
!!! ATTTCCCCCTTGTTTTCATA+AGG + chr2.1:55998737-55998756 None:intergenic 35.0%
AAAACTGGACTATCGTGTAG+GGG - chr2.1:55998760-55998779 MS.gene00342:intron 40.0%
AAACAGGTTACAAACGAGTG+GGG + chr2.1:55998643-55998662 None:intergenic 40.0%
AACCTATTGTCCAACGCATT+AGG - chr2.1:56000703-56000722 MS.gene00342:CDS 40.0%
AAGGTTGACACTGAAGATGA+CGG - chr2.1:55998502-55998521 MS.gene00342:intron 40.0%
AATGTAATACCGGATGAAGC+AGG + chr2.1:55995656-55995675 None:intergenic 40.0%
ACAGTAAAATCAACTAGGCC+AGG + chr2.1:56000891-56000910 None:intergenic 40.0%
ACCAGTGTCTAACCTTGTAT+TGG + chr2.1:55999510-55999529 None:intergenic 40.0%
AGAATCGTCCACTGAACAAA+GGG - chr2.1:56001271-56001290 MS.gene00342:intron 40.0%
AGCTTGCCATGTTTAACACA+TGG - chr2.1:55996383-55996402 MS.gene00342:CDS 40.0%
AGGATCTGGAAAGACATTCA+TGG - chr2.1:56000188-56000207 MS.gene00342:intron 40.0%
AGTCTTTCACACCAGGTAAA+TGG + chr2.1:56000737-56000756 None:intergenic 40.0%
ATAGCTTGACGAGTAACAGA+CGG + chr2.1:56001425-56001444 None:intergenic 40.0%
ATCTGCAGAAACATCCTAGT+AGG + chr2.1:55999362-55999381 None:intergenic 40.0%
ATGAATGTCTTTCCAGATCC+TGG + chr2.1:56000189-56000208 None:intergenic 40.0%
ATGACTTCATGAAATGGTGC+TGG + chr2.1:55996911-55996930 None:intergenic 40.0%
ATGTAATACCGGATGAAGCA+GGG + chr2.1:55995655-55995674 None:intergenic 40.0%
ATTCAGACGAGGAAGATGAT+AGG - chr2.1:55996939-55996958 MS.gene00342:CDS 40.0%
ATTTGGTTATGCAGCCATGT+CGG - chr2.1:55996080-55996099 MS.gene00342:CDS 40.0%
CATAGATTTGGATTTGGACG+GGG - chr2.1:55996616-55996635 MS.gene00342:CDS 40.0%
CCGCCCAAAGTTTATAAAGA+TGG - chr2.1:56000671-56000690 MS.gene00342:CDS 40.0%
CGCTTAGAGAGTGGAAAATT+TGG - chr2.1:55996419-55996438 MS.gene00342:CDS 40.0%
GAAAACTGGACTATCGTGTA+GGG - chr2.1:55998759-55998778 MS.gene00342:intron 40.0%
GAAAGTGAAAAAGCTACTGC+TGG - chr2.1:55996788-55996807 MS.gene00342:CDS 40.0%
GCACCACAGTAAAATCAACT+AGG + chr2.1:56000896-56000915 None:intergenic 40.0%
GGAAAAAGGAGTTTCTGACA+TGG - chr2.1:56000295-56000314 MS.gene00342:CDS 40.0%
GGACAATGGTGATTTAACTC+AGG + chr2.1:55995861-55995880 None:intergenic 40.0%
GGCAATGCAACTTCATGAAA+TGG + chr2.1:55997079-55997098 None:intergenic 40.0%
GGCATAACAACGAGAAAGAA+AGG + chr2.1:55999056-55999075 None:intergenic 40.0%
GGGTATATGTGTGTATATGC+TGG - chr2.1:55998934-55998953 MS.gene00342:CDS 40.0%
GGTTGAAAACACTTTGCAGA+AGG - chr2.1:56000767-56000786 MS.gene00342:CDS 40.0%
GTATCAGTATTCTCGTTCCT+AGG + chr2.1:56000549-56000568 None:intergenic 40.0%
GTTATGTTTGTCGCGTTTGT+GGG - chr2.1:55999449-55999468 MS.gene00342:intron 40.0%
TAGCTATGAAATGGAAGGAC+AGG - chr2.1:56001216-56001235 MS.gene00342:intron 40.0%
TCAACTATTCAGAGTGGTGA+CGG - chr2.1:55996529-55996548 MS.gene00342:CDS 40.0%
TCAATCAAAGCATGTGGTGA+GGG - chr2.1:56001347-56001366 MS.gene00342:intron 40.0%
TCCAATACAAGGTTAGACAC+TGG - chr2.1:55999506-55999525 MS.gene00342:intron 40.0%
TCTGTTACTCGTCAAGCTAT+TGG - chr2.1:56001425-56001444 MS.gene00342:intron 40.0%
TGAAGCCGATAAAAATGGAC+AGG + chr2.1:55998905-55998924 None:intergenic 40.0%
TGATGAAGAAACTCCCAACA+TGG - chr2.1:55996556-55996575 MS.gene00342:CDS 40.0%
TGCATAACTACCAAGCAACA+AGG + chr2.1:55997811-55997830 None:intergenic 40.0%
TTATAAACTTTGGGCGGACA+AGG + chr2.1:56000668-56000687 None:intergenic 40.0%
TTATGTTTGTCGCGTTTGTG+GGG - chr2.1:55999450-55999469 MS.gene00342:intron 40.0%
TTCAGACGAGGAAGATGATA+GGG - chr2.1:55996940-55996959 MS.gene00342:CDS 40.0%
TTCAGATGAGGAGGATGATA+AGG - chr2.1:55996709-55996728 MS.gene00342:CDS 40.0%
TTCATTTGCTTTGCATGTCG+AGG + chr2.1:56000084-56000103 None:intergenic 40.0%
TTTCTTGTCAGAAACCTGGT+GGG - chr2.1:56000129-56000148 MS.gene00342:intron 40.0%
TTTGGGTCAATCAAAGCATG+TGG - chr2.1:56001341-56001360 MS.gene00342:intron 40.0%
! ACAGTTGATGTGAAGGAATG+TGG - chr2.1:56001614-56001633 MS.gene00342:intron 40.0%
! AGAAGGACCCGGATTTTAAA+AGG - chr2.1:56000784-56000803 MS.gene00342:CDS 40.0%
! AGTTGAGACAGTTGATGTGA+AGG - chr2.1:56001607-56001626 MS.gene00342:intron 40.0%
! ATGTGGTGAGGGTATATCAT+TGG - chr2.1:56001358-56001377 MS.gene00342:intron 40.0%
! CCGGACAAAACAACTTTTCT+TGG + chr2.1:56000600-56000619 None:intergenic 40.0%
! GATTTGTCCATGTTTTCGTG+AGG - chr2.1:55995909-55995928 MS.gene00342:CDS 40.0%
! GATTTTCTTGATGAGCTTCC+TGG - chr2.1:56000870-56000889 MS.gene00342:CDS 40.0%
! GGCCCAATATTTGCATTTTC+TGG + chr2.1:55996478-55996497 None:intergenic 40.0%
! GTGAGGGTATATCATTGGTT+GGG - chr2.1:56001363-56001382 MS.gene00342:intron 40.0%
! TAAAGTGGAATCTTCTGGAG+AGG - chr2.1:55997357-55997376 MS.gene00342:CDS 40.0%
! TGAGGGTATATCATTGGTTG+GGG - chr2.1:56001364-56001383 MS.gene00342:intron 40.0%
! TGGTGTTTGTACTTTTGCGA+GGG + chr2.1:56000580-56000599 None:intergenic 40.0%
! TTTTCTTGTCAGAAACCTGG+TGG - chr2.1:56000128-56000147 MS.gene00342:intron 40.0%
!! AGCGTCATTTTCCTCTTCTT+CGG + chr2.1:55999392-55999411 None:intergenic 40.0%
!! CACCATTTTTCCCACAAAAG+AGG + chr2.1:55999730-55999749 None:intergenic 40.0%
!! CATTATCATCGATTCAGACG+AGG - chr2.1:55996928-55996947 MS.gene00342:CDS 40.0%
!! CATTTGGGTTGTATCCTTCT+TGG - chr2.1:55997175-55997194 MS.gene00342:CDS 40.0%
!! CCAAAAAAGATTTTGGCCTC+GGG + chr2.1:56001326-56001345 None:intergenic 40.0%
!! CCCAAAAAAGATTTTGGCCT+CGG + chr2.1:56001327-56001346 None:intergenic 40.0%
!! GTTAGATGCTAGAGAGCATT+TGG - chr2.1:55996063-55996082 MS.gene00342:CDS 40.0%
!! GTTTCAGGTACCTCTTTTGT+GGG - chr2.1:55999717-55999736 MS.gene00342:intron 40.0%
!! TGGCCTAGTTGATTTTACTG+TGG - chr2.1:56000890-56000909 MS.gene00342:CDS 40.0%
!! TGGTGCCAAAACATCCTTTT+CGG + chr2.1:55996648-55996667 None:intergenic 40.0%
!! TTGGTGTTTGTACTTTTGCG+AGG + chr2.1:56000581-56000600 None:intergenic 40.0%
!! TTTTCTGGTACCTTGTTGCT+TGG - chr2.1:55997798-55997817 MS.gene00342:intron 40.0%
!!! AGTTTTTTGCGTCCTTCTTC+AGG + chr2.1:55996347-55996366 None:intergenic 40.0%
!!! CCGAGGCCAAAATCTTTTTT+GGG - chr2.1:56001324-56001343 MS.gene00342:intron 40.0%
!!! GATGTTTTGGCACCAAAAAG+AGG - chr2.1:55996653-55996672 MS.gene00342:CDS 40.0%
AAACACTTTGCAGAAGGACC+CGG - chr2.1:56000773-56000792 MS.gene00342:CDS 45.0%
AAAGCTTCTCACCAGCTGAT+TGG + chr2.1:56001151-56001170 None:intergenic 45.0%
AAATGGAAGGACAGGAGTCT+TGG - chr2.1:56001224-56001243 MS.gene00342:intron 45.0%
AACAGGTTACAAACGAGTGG+GGG + chr2.1:55998642-55998661 None:intergenic 45.0%
AGAAGATGTTTGGAGGGAGA+TGG - chr2.1:55998528-55998547 MS.gene00342:intron 45.0%
AGGAGTAGGATCCATTTACC+TGG - chr2.1:56000723-56000742 MS.gene00342:CDS 45.0%
AGGTTGACACTGAAGATGAC+GGG - chr2.1:55998503-55998522 MS.gene00342:intron 45.0%
ATAGTAGTGCAGTACCTTGC+TGG + chr2.1:56000844-56000863 None:intergenic 45.0%
CATGATCCCAATGCTTACCA+TGG - chr2.1:55998289-55998308 MS.gene00342:intron 45.0%
CCACAGTACTTGTGTCAAGA+AGG - chr2.1:56001526-56001545 MS.gene00342:intron 45.0%
CCTTTACTCCTATGAGGCTA+CGG - chr2.1:55997931-55997950 MS.gene00342:CDS 45.0%
CTAGAATCTTCCGCCACAAA+TGG + chr2.1:55997234-55997253 None:intergenic 45.0%
CTCCTAATGCGTTGGACAAT+AGG + chr2.1:56000708-56000727 None:intergenic 45.0%
CTGAATCTATGCCAATCAGC+TGG - chr2.1:56001137-56001156 MS.gene00342:intron 45.0%
GAGAATCGTCCACTGAACAA+AGG - chr2.1:56001270-56001289 MS.gene00342:intron 45.0%
GAGGAGGATGATAAGGATCA+TGG - chr2.1:55996716-55996735 MS.gene00342:CDS 45.0%
GGAAAACTGGACTATCGTGT+AGG - chr2.1:55998758-55998777 MS.gene00342:intron 45.0%
GGAAGTCTTAAAACAGTGGG+TGG - chr2.1:56000383-56000402 MS.gene00342:CDS 45.0%
GGTTATGTTTGTCGCGTTTG+TGG - chr2.1:55999448-55999467 MS.gene00342:intron 45.0%
GTCAATCAAAGCATGTGGTG+AGG - chr2.1:56001346-56001365 MS.gene00342:intron 45.0%
GTTGGGACACTTGAGACAAA+AGG + chr2.1:55997736-55997755 None:intergenic 45.0%
GTTTGTGGGGTTATTGACAG+AGG - chr2.1:55999463-55999482 MS.gene00342:intron 45.0%
TAGCTTGACGAGTAACAGAC+GGG + chr2.1:56001424-56001443 None:intergenic 45.0%
TATCTAGCCAACCCCAAAGT+GGG - chr2.1:55998189-55998208 MS.gene00342:intron 45.0%
TCACAGAAGTCTTTCACACC+AGG + chr2.1:56000744-56000763 None:intergenic 45.0%
TCAGACCACCCTACTAGAAA+AGG + chr2.1:55996039-55996058 None:intergenic 45.0%
TCAGGAATTTCGCCTGAAGA+AGG - chr2.1:55996332-55996351 MS.gene00342:CDS 45.0%
TCGGTCAAATCATCCCAAGA+AGG + chr2.1:55997192-55997211 None:intergenic 45.0%
TCTAATGCAGGAGACTGAAC+TGG + chr2.1:55997106-55997125 None:intergenic 45.0%
TCTCCTCCATGGTAAGCATT+GGG + chr2.1:55998298-55998317 None:intergenic 45.0%
TTCTCCTCCATGGTAAGCAT+TGG + chr2.1:55998299-55998318 None:intergenic 45.0%
TTGTCCAACGCATTAGGAGT+AGG - chr2.1:56000709-56000728 MS.gene00342:CDS 45.0%
TTGTCTCAAGTGTCCCAACT+TGG - chr2.1:55997737-55997756 MS.gene00342:intron 45.0%
! ACTTCATGAAATGGTGCTGG+AGG + chr2.1:55996908-55996927 None:intergenic 45.0%
! ATCAGCTGGTGAGAAGCTTT+TGG - chr2.1:56001151-56001170 MS.gene00342:intron 45.0%
! CCTTCTTGACACAAGTACTG+TGG + chr2.1:56001529-56001548 None:intergenic 45.0%
! GCACACCGAAAAGGATGTTT+TGG - chr2.1:55996640-55996659 MS.gene00342:CDS 45.0%
! GGTGAGGGTATATCATTGGT+TGG - chr2.1:56001362-56001381 MS.gene00342:intron 45.0%
! TCATTTTCCTCTTCTTCGGG+TGG + chr2.1:55999388-55999407 None:intergenic 45.0%
!! AACACTTTCCTTTTCTGGCC+TGG + chr2.1:56001464-56001483 None:intergenic 45.0%
!! ATGACGGGCTAGAAGATGTT+TGG - chr2.1:55998518-55998537 MS.gene00342:intron 45.0%
!! GCGTCATTTTCCTCTTCTTC+GGG + chr2.1:55999391-55999410 None:intergenic 45.0%
!! GGTTTCAGGTACCTCTTTTG+TGG - chr2.1:55999716-55999735 MS.gene00342:intron 45.0%
!! TCGAACCTTTTCTAGTAGGG+TGG - chr2.1:55996031-55996050 MS.gene00342:CDS 45.0%
!! TTGAATCCTTCGACTTGGTG+CGG + chr2.1:56000108-56000127 None:intergenic 45.0%
!! TTGGTTTCAAGTTTGGGTGC+AGG + chr2.1:56001010-56001029 None:intergenic 45.0%
!!! CCCGAGGCCAAAATCTTTTT+TGG - chr2.1:56001323-56001342 MS.gene00342:intron 45.0%
!!! TCTTTTTCCCACTTTGGGGT+TGG + chr2.1:55998199-55998218 None:intergenic 45.0%
!! TAAAAAAAATAACAAAATTA+AGG + chr2.1:55997299-55997318 None:intergenic 5.0%
ACAGGTTACAAACGAGTGGG+GGG + chr2.1:55998641-55998660 None:intergenic 50.0%
AGATCATCCACCCGAAGAAG+AGG - chr2.1:55999378-55999397 MS.gene00342:intron 50.0%
AGTAAACGCCCTGCTTCATC+CGG - chr2.1:55995644-55995663 MS.gene00342:intron 50.0%
ATGAAACCGCACCAAGTCGA+AGG - chr2.1:56000099-56000118 MS.gene00342:intron 50.0%
CAAGGGGGAAATGGGAAAAC+TGG - chr2.1:55998745-55998764 MS.gene00342:intron 50.0%
CCGTAGCCTCATAGGAGTAA+AGG + chr2.1:55997934-55997953 None:intergenic 50.0%
CGAACCAAGATGTGAGAGAC+GGG - chr2.1:56001087-56001106 MS.gene00342:intron 50.0%
CTATCTAGCCAACCCCAAAG+TGG - chr2.1:55998188-55998207 MS.gene00342:intron 50.0%
GAACCAAGATGTGAGAGACG+GGG - chr2.1:56001088-56001107 MS.gene00342:intron 50.0%
GATCCCAATGCTTACCATGG+AGG - chr2.1:55998292-55998311 MS.gene00342:intron 50.0%
GATCTGCATGTTCTCCTCCA+TGG + chr2.1:55998309-55998328 None:intergenic 50.0%
GCGAACCAAGATGTGAGAGA+CGG - chr2.1:56001086-56001105 MS.gene00342:intron 50.0%
GGAGTTTCTGACATGGCAAG+TGG - chr2.1:56000302-56000321 MS.gene00342:CDS 50.0%
GGATCCTACTCCTAATGCGT+TGG + chr2.1:56000716-56000735 None:intergenic 50.0%
GTACTGTGGTCTTCCTCTTC+TGG + chr2.1:56001515-56001534 None:intergenic 50.0%
TAGATGAGGGACACACTCCT+AGG - chr2.1:56000529-56000548 MS.gene00342:CDS 50.0%
TCTGCATGCACGCTGTTCTT+TGG - chr2.1:55999227-55999246 MS.gene00342:intron 50.0%
TGTTTGGAGGGAGATGGCAA+TGG - chr2.1:55998534-55998553 MS.gene00342:intron 50.0%
! CGGGCTAGAAGATGTTTGGA+GGG - chr2.1:55998522-55998541 MS.gene00342:intron 50.0%
! GGAATCTTCTGGAGAGGAAG+AGG - chr2.1:55997363-55997382 MS.gene00342:CDS 50.0%
!! ACGGGCTAGAAGATGTTTGG+AGG - chr2.1:55998521-55998540 MS.gene00342:intron 50.0%
!! AGCTGCTGATTCTCCAGAAG+AGG - chr2.1:56001499-56001518 MS.gene00342:intron 50.0%
!! CTTTCCTTTTCTGGCCTGGT+CGG + chr2.1:56001460-56001479 None:intergenic 50.0%
!! GCAGGAGACTGAACTGGTTT+TGG + chr2.1:55997100-55997119 None:intergenic 50.0%
!! TGAACAAAGGGAGTGCTCCA+TGG - chr2.1:56001283-56001302 MS.gene00342:intron 50.0%
CAGGTTACAAACGAGTGGGG+GGG + chr2.1:55998640-55998659 None:intergenic 55.0%
CCTCTCGTGGTGCTTCCTAA+AGG - chr2.1:56000258-56000277 MS.gene00342:intron 55.0%
CTCCAACCAGCAAACCGACA+TGG + chr2.1:55996097-55996116 None:intergenic 55.0%
CTTTCCGACCAGGCCAGAAA+AGG - chr2.1:56001453-56001472 MS.gene00342:intron 55.0%
GAGGGAGATGGCAATGGCAA+TGG - chr2.1:55998540-55998559 MS.gene00342:intron 55.0%
GATGTGAGCCGTAGCCTCAT+AGG + chr2.1:55997942-55997961 None:intergenic 55.0%
TCACCCCGTCTCTCACATCT+TGG + chr2.1:56001094-56001113 None:intergenic 55.0%
TTTGCGGGAGATGACCAGCA+AGG - chr2.1:56000827-56000846 MS.gene00342:CDS 55.0%
! GGAGCACTCCCTTTGTTCAG+TGG + chr2.1:56001282-56001301 None:intergenic 55.0%
! GGATGAAGCAGGGCGTTTAC+TGG + chr2.1:55995645-55995664 None:intergenic 55.0%
! TGAAGCAGGGCGTTTACTGG+AGG + chr2.1:55995642-55995661 None:intergenic 55.0%
!! AGCCATGTCGGTTTGCTGGT+TGG - chr2.1:55996092-55996111 MS.gene00342:CDS 55.0%
!! ATGCAGCCATGTCGGTTTGC+TGG - chr2.1:55996088-55996107 MS.gene00342:CDS 55.0%
!! CATGTCGGTTTGCTGGTTGG+AGG - chr2.1:55996095-55996114 MS.gene00342:CDS 55.0%
!! CCTTTAGGAAGCACCACGAG+AGG + chr2.1:56000261-56000280 None:intergenic 55.0%
!! GACGAGTAACAGACGGGTTG+AGG + chr2.1:56001418-56001437 None:intergenic 55.0%
!! TGCATTCTGGCTCATGCTCC+AGG - chr2.1:56000168-56000187 MS.gene00342:intron 55.0%
AACCTGGTGGGAGACCATCC+TGG - chr2.1:56000141-56000160 MS.gene00342:intron 60.0%
ACCACGAGAGGTCGTGCATC+AGG + chr2.1:56000249-56000268 None:intergenic 60.0%
ACCTGGTGGGAGACCATCCT+GGG - chr2.1:56000142-56000161 MS.gene00342:intron 60.0%
ATTGGCCGTGCTTTCCGACC+AGG - chr2.1:56001443-56001462 MS.gene00342:intron 60.0%
CCAGAATGCATCCCCCAGGA+TGG + chr2.1:56000158-56000177 None:intergenic 60.0%
CCATCCTGGGGGATGCATTC+TGG - chr2.1:56000155-56000174 MS.gene00342:intron 60.0%
CTGGCTCATGCTCCAGGATC+TGG - chr2.1:56000174-56000193 MS.gene00342:intron 60.0%
TCCTGATGCACGACCTCTCG+TGG - chr2.1:56000245-56000264 MS.gene00342:intron 60.0%
TCTGGCCTGGTCGGAAAGCA+CGG + chr2.1:56001451-56001470 None:intergenic 60.0%
TGAGCCAGAATGCATCCCCC+AGG + chr2.1:56000162-56000181 None:intergenic 60.0%
! TTGCTGGTTGGAGGTGGTGG+TGG - chr2.1:55996104-55996123 MS.gene00342:CDS 60.0%
!! GGTTTGCTGGTTGGAGGTGG+TGG - chr2.1:55996101-55996120 MS.gene00342:CDS 60.0%
!! GTCGGTTTGCTGGTTGGAGG+TGG - chr2.1:55996098-55996117 MS.gene00342:CDS 60.0%
CCTGGTGGGAGACCATCCTG+GGG - chr2.1:56000143-56000162 MS.gene00342:intron 65.0%
CTGGTGGGAGACCATCCTGG+GGG - chr2.1:56000144-56000163 MS.gene00342:intron 65.0%
! GGACGGGGAGCACACCGAAA+AGG - chr2.1:55996631-55996650 MS.gene00342:CDS 65.0%
CCCCAGGATGGTCTCCCACC+AGG + chr2.1:56000146-56000165 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 55995632 56001791 55995632 ID=MS.gene00342
chr2.1 mRNA 55995632 56001791 55995632 ID=MS.gene00342.t1;Parent=MS.gene00342
chr2.1 exon 56001758 56001791 56001758 ID=MS.gene00342.t1.exon1;Parent=MS.gene00342.t1
chr2.1 CDS 56001758 56001791 56001758 ID=cds.MS.gene00342.t1;Parent=MS.gene00342.t1
chr2.1 exon 56000291 56001087 56000291 ID=MS.gene00342.t1.exon2;Parent=MS.gene00342.t1
chr2.1 CDS 56000291 56001087 56000291 ID=cds.MS.gene00342.t1;Parent=MS.gene00342.t1
chr2.1 exon 55998850 55999140 55998850 ID=MS.gene00342.t1.exon3;Parent=MS.gene00342.t1
chr2.1 CDS 55998850 55999140 55998850 ID=cds.MS.gene00342.t1;Parent=MS.gene00342.t1
chr2.1 exon 55997907 55998056 55997907 ID=MS.gene00342.t1.exon4;Parent=MS.gene00342.t1
chr2.1 CDS 55997907 55998056 55997907 ID=cds.MS.gene00342.t1;Parent=MS.gene00342.t1
chr2.1 exon 55995730 55997459 55995730 ID=MS.gene00342.t1.exon5;Parent=MS.gene00342.t1
chr2.1 CDS 55995730 55997459 55995730 ID=cds.MS.gene00342.t1;Parent=MS.gene00342.t1
chr2.1 exon 55995632 55995635 55995632 ID=MS.gene00342.t1.exon6;Parent=MS.gene00342.t1
chr2.1 CDS 55995632 55995635 55995632 ID=cds.MS.gene00342.t1;Parent=MS.gene00342.t1
Gene Sequence

>MS.gene00342

ATGGCGTCCTCCAGTAAACGCCCTGCTTCATCCGGTATTACATTCTTCCATTCTTTCTCTTTCTTTTTGCTTTCTTTAATTAGCTAAAAACAATGATTTTAGGGAGAATCACATTTTTTAGGTTTTTCTCTAAATGTTACGCTCATAAACTTCTAAAAGTGATTATTTTGTTTAAAAATCGTAACTTTTCCTCGAAATAATCTGTAACAAACGGGCTCTTACTCGTCCTGAGTTAAATCACCATTGTCCATGGATCAATATATATTTTTTTTCATGTGATTTGTCCATGTTTTCGTGAGGAAATTGTCTATACAATGTAATGTAGCTTTGTGCTAACTGTATTTGTAACTTGTAAGGCTTTTTTTTAGAAATGTGTTTGGAACCCTTTTTTTGTTACTATCGAACCTTTTCTAGTAGGGTGGTCTGAAAGTGTTAGATGCTAGAGAGCATTTGGTTATGCAGCCATGTCGGTTTGCTGGTTGGAGGTGGTGGTGGTGTGTGTGCCTGAAAATGAAATGATAAAGTTACTCGAGTTAGTCTCGAAATGAAATGAGGGGTGTGTCTAACATGAAGTAATCCATTTGTTCTTATTCATGTATTTCAGATTGCTTAGTTTTCTGGTTTATTTGAAGTAAAAAAAAAAAAAAATCCTTAATGGATATTAGTATCTTGTAATTTTTATACATTTCATTTTCTGAAATCAGGAATTTCGCCTGAAGAAGGACGCAAAAAACTTAAACTGTCAAGTGATAGCTTGCCATGTTTAACACATGGTGATGTTATAAATCGCTTAGAGAGTGGAAAATTTGGAAGTGTGACAAAAAATATTGAAGACCTTATAACCCAGAAAATGCAAATATTGGGCCCTTACTTTGCAAAATGTCCTAGACTTGCTAATCAACTATTCAGAGTGGTGACGGATCATGATGAAGAAACTCCCAACATGGAAAATAAGAACGTTACTGGTTTGGAACATCATAATGTCATAGATTTGGATTTGGACGGGGAGCACACCGAAAAGGATGTTTTGGCACCAAAAAGAGGATACAATGTCACTGCAGTACCATTTATCATTGATTCAGATGAGGAGGATGATAAGGATCATGGTCATGATACTGTTCCAACAGATGATCATGATGAAGAAACTCCCTACATTGAAAGTGAAAAAGCTACTGCTGGTATGTCCCATCAAAATGTTACCATTGATTCAAATGAGGAAGATGATAGGGATCAAAAAAAGGATATTTTGGCACCGAAAAGAGAAAACAATGTTCCTCCAGCACCATTTCATGAAGTCATTATCATCGATTCAGACGAGGAAGATGATAGGGATCATGATGAAGAAACTCCCAACATGGAAAATGAAAAAGTTACTGCTATGTCCGATCAAAATGTTATCATTGATTCAAATGGGGAAGATGACAAAGATCAAACTTCTTTTCTTCCATTTCATGAAGTTGCATTGCCAAAACCAGTTCAGTCTCCTGCATTAGAAATGATTGTAAGCTCTGCCCTGCTTTTGCAATCCTTTAAACACACCTTTCATTTGGGTTGTATCCTTCTTGGGATGATTTGACCGAACTATTGTACTTCATTTTACCATTTGTGGCGGAAGATTCTAGTAAATTCATAATTGATTCTTTCTTGAATTTTTTTTTATCTTTCCTTAATTTTGTTATTTTTTTTATCAAGAATATGCTGCCTTATTTTTTACTTTAATATGTATAAAGTGGAATCTTCTGGAGAGGAAGAGGCCAGAGATATAATTTAGTCTGACATATATTTGGAAGGCATGCTTTAAAAAGTTAATCATGCAATCTATATATTTTTTCTATATGTTTACATTTTTTCGCTTATTATATCTTTTTACAATGTATAACTTATCATTATAGGTCTTTGGCGTTATTCTGTAAAAGATAGAGATATGATAGAGATATAATACATTATTGCATAGCCTAAATGTTGGATTTCTCTTAGTTGTTGTAGAAGTTCTCTTCATTGAATCATGTGCGTTTTTAAGTACATTCTCTCAACATTTTCACTAATTACATAGTCAATTGATTACCATTCTACTGTCAAGTTTCACTGAAGTGAAGTCTGACCTTTTGTCTCAAGTGTCCCAACTTGGTAATCATTTGATATCTTGATAAACTCTTACAATATAAATTTTCTGGTACCTTGTTGCTTGGTAGTTATGCAAATTATAGATTGGAAAATATTGGAAAATAATAAATAAAAAAAATGGATATTGTGGATTTACATTTATCTGAATGTCATGCTATTTCTACCTTCCTTTTTTCCTTTACTCCTATGAGGCTACGGCTCACATCATTACTGCTGAACGATGAACAATATATGGGGTTTTCCATTTATTTTTCCAAACATGTTGTAGGAACTTTTTCCATAGGGATTGTTAATGCTCATAAATCTAGATTCCTTGGTAAGATTCTTTGTATTAGGTTTAAAAATTGTAGCTACTTTTCTTGAGAAGATGCATGCCTTTTTTTCTTTTCTTTTCACTACACAAGTTTTTTTTTCTTTCTTTTCTTTTCAGTTCTATCTAGCCAACCCCAAAGTGGGAAAAAGAATGTTATTGTTGTTGTTGTTTCACTGACATTCTTGACTACTCTCTGTGCAAAAATGCTTTATAGGGATATCATGATCCCAATGCTTACCATGGAGGAGAACATGCAGATCTAAAATTTGAAACAAGTCTGCTTCCTAATGATAACACAAAGAAAGACAAAGGTAATTATGTTGGAGTACATGAGGAAGAAGATAATAAGGAATTTGAAACAAGTCTGTCTCTTGAAGATAACACAAAGAAAGACAAAGGTGTTTACATTGGTGTACATGAGGAAGAAGATAACAAGGTTGACACTGAAGATGACGGGCTAGAAGATGTTTGGAGGGAGATGGCAATGGCAATGGAAACTTCTAAAGTATGTATACATTCTTTTGATTTTACTTTTCAACTAGAACAACTATCTTTGTCAAGTAGATTTCCCCCCCACTCGTTTGTAACCTGTTTTTCTTCATATTATTTCTTTTGCAGTGCTTCCTTAATATATATCTGTTAATGATCCTAAGACAGAGCATTTTCCTTATGAAAACAAGGGGGAAATGGGAAAACTGGACTATCGTGTAGGGGAATGAATTGATAAAGATTTGCGACACTGTTTCCTTCTTTGATGAGCGTTTTACTTATTAACATGAATATACATTGATTTATAAAGAAGACTAAATAATTTTGATGTTCACTGAGAATGGCCTGTCCATTTTTATCGGCTTCATTTAGTATAGGGTATATGTGTGTATATGCTGGTGACCATACCTAGTTAATGTAATGCATATTTCATGTACTATTATGTCCTGAAATCTTCTGAATTATGATGTTTAATTATTTAGCACTTACATTCAACCTTTCTTTCTCGTTGTTATGCCTGTTATATGCATGTAACTTGAAATTCTTCTGTCAAATTTTATATTGCAATTATGTTTTTATTATCAATAAAATAATTTCTATGCATATGGTAATTTGACTTTAAGAGCATCAGGAATGTTGGTTCTGTTACTAAAACTTGAGATAGTTGCATCTGCATGCACGCTGTTCTTTGGTTTTTATTGTTCATCTCTATCATATTGATCATTTTTGTTTAAACTTTGAATTTTACTCATTATATTATCTCTTAGAGTTCCTTTGGGATTGATTTAGTTTAAATGTACTCCTACTAGGATGTTTCTGCAGATCATCCACCCGAAGAAGAGGAAAATGACGCTGACTGTGATCATTCTTTCATTTTAAAAGACGATCTTGGTTATGTTTGTCGCGTTTGTGGGGTTATTGACAGAGGAATTGAAACCATATTTGAGTTCCAATACAAGGTTAGACACTGGTCTCTGCATTAATGCTTGTTTGGTCTTAAATATTGGTCATAAGAACATAGCAAGTGTGTGAATTGAGTTATAAAGTATGTCTTAAAATTAGATTCATAGGTTGAATGTTTCAACATGGGATAATAATACAGAGTGAAACAGTTAGAATTTAGAAACTTGATGTGTTACAGAATCTCTTATAGTTTATGGTTTCAGGTACCTCTTTTGTGGGAAAAATGGTGATTTATTTTATTCAATTCAATTCAATTCAATGTATAAAGCTTTGTAAAACAATCAAGAACCTCTTTACCAAACCAAAATGATAAAATGGCACATTAGGACATTTTATGGCATGGGCTAACATTGCTTTGTAAAACAGTGTGTTCTTCGTAATTCACAAAACTGATTTATTGTTATTGTTATTTATTAGTTATTACCGTATCAATTTTATTGAAGGTTAAAAAGAGCACAAGAACTTATATGTCTGAATCATGGAATGCCAAAGAAAAAGCTGATATATTTGGAGTTAAGATTGCTAAAGATGATCTCTCAGTAACTGAAATATCAGCACATCCTCGACATGCAAAGCAAATGAAACCGCACCAAGTCGAAGGATTCAATTTTCTTGTCAGAAACCTGGTGGGAGACCATCCTGGGGGATGCATTCTGGCTCATGCTCCAGGATCTGGAAAGACATTCATGGTTATCTGTTTCATACAGAGTTTTCTAGAGAAGTATCCTGATGCACGACCTCTCGTGGTGCTTCCTAAAGGAATACTATCGACTTGGAAAAAGGAGTTTCTGACATGGCAAGTGGAAGATGTACCACTTTATGATTTTTACAGTGTGAAGGCTGACAGTAGATCACAACAATTGGAAGTCTTAAAACAGTGGGTGGATAACAAGAGTATCCTTTTCTTAGGATACCAACAGTTTTCGTCCATTATCTGTGATAACTGTAATAACAATACATCAATATCTTGCCAAGATATATTGCTTAAGAAACCGTCAATTCTCATTTTAGATGAGGGACACACTCCTAGGAACGAGAATACTGATACGGTACAGTCCCTCGCAAAAGTACAAACACCAAGAAAAGTTGTTTTGTCCGGGACTTTATATCAAAATCATGTCAAGGAGGTATTTAACGTGCTTAACCTTGTCCGCCCAAAGTTTATAAAGATGGAAACGTCTAAACCTATTGTCCAACGCATTAGGAGTAGGATCCATTTACCTGGTGTGAAAGACTTCTGTGATTTGGTTGAAAACACTTTGCAGAAGGACCCGGATTTTAAAAGGAAAGTAGCTGTTATACATGATTTGCGGGAGATGACCAGCAAGGTACTGCACTACTATAAAGGAGATTTTCTTGATGAGCTTCCTGGCCTAGTTGATTTTACTGTGGTGCTCAACATGACACCCAGACAAAAGCATGAAGTTAAGACAATAAAGAGGGTATTTAGAAAGTTCAAGATGTCTTCTGTAGGTAGTGCTGTATACCTGCACCCAAACTTGAAACCAATTGCTGAGAAATGTAGTGAAAATTCTATATCTGAGCATACAATGGATGATCTAATAGCGAACCAAGATGTGAGAGACGGGGTGAAATTAAAATTCTTTCGCAATATGCTGAATCTATGCCAATCAGCTGGTGAGAAGCTTTTGGTGTTCAGTCAATATCTCTTGCCTCTAAAATATTTGGAAAGGTTAGCTATGAAATGGAAGGACAGGAGTCTTGGCAAAGAAATTTTTGTAATATCAGGAGAATCGTCCACTGAACAAAGGGAGTGCTCCATGGAAAAATTCAACAATTCACCCGAGGCCAAAATCTTTTTTGGGTCAATCAAAGCATGTGGTGAGGGTATATCATTGGTTGGGGCATCTCGTGTCATCATCTTAGATGTGCACCTCAACCCGTCTGTTACTCGTCAAGCTATTGGCCGTGCTTTCCGACCAGGCCAGAAAAGGAAAGTGTTTGTGTATCGATTGATAGCTGCTGATTCTCCAGAAGAGGAAGACCACAGTACTTGTGTCAAGAAGGAATTAATTTCGAAAATGTGGTTTGAATGGAATGAATATTGTGGTGACAAAGCTTTTGAAGTTGAGACAGTTGATGTGAAGGAATGTGGTGATATGTTTCTAGAAAGTCCATTGTTAGGGGAAGATGTAAAAGCCCTGTATAAAAGGTTAGACCACTGTTACATAATTTTTTGTATATCATAAGAAAATAAGACAGTTATTTTGTTTTGTCCTAATTCTTGTTTTATTTGTATTTGTCAGGTAA
Protein sequence

>MS.gene00342.t1

MASSSKRPASSGISPEEGRKKLKLSSDSLPCLTHGDVINRLESGKFGSVTKNIEDLITQKMQILGPYFAKCPRLANQLFRVVTDHDEETPNMENKNVTGLEHHNVIDLDLDGEHTEKDVLAPKRGYNVTAVPFIIDSDEEDDKDHGHDTVPTDDHDEETPYIESEKATAGMSHQNVTIDSNEEDDRDQKKDILAPKRENNVPPAPFHEVIIIDSDEEDDRDHDEETPNMENEKVTAMSDQNVIIDSNGEDDKDQTSFLPFHEVALPKPVQSPALEMIGYHDPNAYHGGEHADLKFETSLLPNDNTKKDKGNYVGVHEEEDNKEFETSLSLEDNTKKDKGVYIGVHEEEDNKVDTEDDGLEDVWREMAMAMETSKDVSADHPPEEEENDADCDHSFILKDDLGYVCRVCGVIDRGIETIFEFQYKVKKSTRTYMSESWNAKEKADIFGVKIAKDDLSVTEISAHPRHAKQMKPHQVEGFNFLVRNLVGDHPGGCILAHAPGSGKTFMVICFIQSFLEKYPDARPLVVLPKGILSTWKKEFLTWQVEDVPLYDFYSVKADSRSQQLEVLKQWVDNKSILFLGYQQFSSIICDNCNNNTSISCQDILLKKPSILILDEGHTPRNENTDTVQSLAKVQTPRKVVLSGTLYQNHVKEVFNVLNLVRPKFIKMETSKPIVQRIRSRIHLPGVKDFCDLVENTLQKDPDFKRKVAVIHDLREMTSKVLHYYKGDFLDELPGLVDFTVVLNMTPRQKHEVKTIKRVFRKFKMSSVGSAVYLHPNLKPIAEKCSENSISEHTMDDLIANQDVRDGVKLKFFRNMLNLCQSAGEKLLVFSQYLLPLKYLERLAMKWKDRSLGKEIFVISGESSTEQRECSMEKFNNSPEAKIFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQKRKVFVYRLIAADSPEEEDHSTCVKKELISKMWFEWNEYCGDKAFEVETVDVKECGDMFLESPLLGEDVKALYKR