AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene004347

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004347.t1 MTR_0565s0010 98.904 365 4 0 1 365 1 365 0.0 733
MS.gene004347.t1 MTR_3g024510 80.508 354 67 2 13 365 18 370 0.0 589
MS.gene004347.t1 MTR_8g087890 71.585 366 100 3 1 365 1 363 0.0 540
MS.gene004347.t1 MTR_3g005660 56.305 341 144 4 28 365 32 370 2.33e-130 378
MS.gene004347.t1 MTR_3g005650 52.408 353 162 5 13 365 11 357 1.91e-125 365
MS.gene004347.t1 MTR_3g098270 45.205 365 183 7 14 364 7 368 5.63e-109 324
MS.gene004347.t1 MTR_8g087870 46.356 343 161 5 29 365 26 351 2.51e-105 313
MS.gene004347.t1 MTR_3g023220 45.266 338 172 4 27 364 28 352 2.07e-104 311
MS.gene004347.t1 MTR_4g035353 45.098 357 189 6 13 365 10 363 6.05e-104 310
MS.gene004347.t1 MTR_2g017955 46.450 338 171 5 29 364 30 359 1.87e-102 307
MS.gene004347.t1 MTR_2g017925 44.382 356 182 6 13 364 11 354 7.08e-102 305
MS.gene004347.t1 MTR_2g017875 45.930 344 174 6 25 365 27 361 1.53e-101 304
MS.gene004347.t1 MTR_2g017965 43.716 366 190 9 7 364 3 360 3.86e-96 291
MS.gene004347.t1 MTR_2g017915 42.192 365 175 7 7 364 3 338 1.91e-92 281
MS.gene004347.t1 MTR_2g033920 40.960 354 201 7 15 364 18 367 2.88e-87 268
MS.gene004347.t1 MTR_2g033930 38.920 352 209 6 15 364 15 362 7.14e-83 256
MS.gene004347.t1 MTR_4g122200 38.056 360 214 8 9 364 13 367 7.29e-83 256
MS.gene004347.t1 MTR_5g078210 38.329 347 202 11 6 348 1 339 5.40e-78 244
MS.gene004347.t1 MTR_1g079540 39.286 336 198 5 15 346 12 345 9.46e-76 238
MS.gene004347.t1 MTR_5g009100 37.838 333 201 5 34 363 48 377 2.12e-75 238
MS.gene004347.t1 MTR_7g116570 37.427 342 203 6 8 344 11 346 5.03e-73 231
MS.gene004347.t1 MTR_7g116500 39.104 335 193 7 33 362 34 362 5.80e-72 229
MS.gene004347.t1 MTR_1g069175 38.889 342 203 5 13 350 14 353 2.06e-70 225
MS.gene004347.t1 MTR_1g024890 35.613 351 219 6 14 360 12 359 2.35e-70 224
MS.gene004347.t1 MTR_7g116510 35.854 357 222 7 13 365 5 358 1.19e-69 223
MS.gene004347.t1 MTR_3g052490 38.286 350 197 9 23 362 23 363 1.39e-69 223
MS.gene004347.t1 MTR_3g052480 37.234 376 212 10 5 365 2 368 7.22e-69 221
MS.gene004347.t1 MTR_7g116520 36.872 358 216 8 9 362 12 363 9.22e-69 221
MS.gene004347.t1 MTR_8g079050 36.517 356 214 7 1 344 1 356 1.28e-68 220
MS.gene004347.t1 MTR_2g018015 39.645 338 132 7 29 364 33 300 3.79e-68 217
MS.gene004347.t1 MTR_5g093090 37.396 361 206 11 13 362 8 359 6.01e-68 218
MS.gene004347.t1 MTR_1g025780 35.806 310 189 6 30 335 39 342 9.21e-67 215
MS.gene004347.t1 MTR_1g079530 36.212 359 208 8 14 365 11 355 1.20e-66 215
MS.gene004347.t1 MTR_4g019880 37.389 337 196 8 14 341 13 343 4.36e-66 213
MS.gene004347.t1 MTR_4g108690 35.783 313 193 6 34 342 29 337 6.34e-66 213
MS.gene004347.t1 MTR_3g435540 35.821 335 202 9 13 342 7 333 1.49e-65 212
MS.gene004347.t1 MTR_5g084790 35.447 347 216 6 1 343 1 343 1.77e-65 211
MS.gene004347.t1 MTR_3g082830 37.188 320 193 6 27 342 33 348 2.04e-65 211
MS.gene004347.t1 MTR_6g021530 36.522 345 205 7 14 346 8 350 2.78e-65 211
MS.gene004347.t1 MTR_1g025760 34.375 352 209 8 1 336 39 384 2.85e-64 210
MS.gene004347.t1 MTR_2g084585 35.088 342 212 7 6 342 4 340 4.32e-64 208
MS.gene004347.t1 MTR_2g033920 41.281 281 159 5 15 292 18 295 4.36e-64 206
MS.gene004347.t1 MTR_8g074570 37.791 344 186 10 13 340 17 348 7.25e-64 208
MS.gene004347.t1 MTR_4g056160 35.694 353 203 10 16 357 11 350 1.01e-63 207
MS.gene004347.t1 MTR_1g025700 36.452 310 190 5 30 336 48 353 1.57e-63 207
MS.gene004347.t1 MTR_5g084750 35.569 343 208 8 6 340 1 338 5.89e-63 205
MS.gene004347.t1 MTR_1g025720 35.806 310 190 6 31 336 36 340 6.17e-63 205
MS.gene004347.t1 MTR_3g052580 35.068 365 211 11 13 365 11 361 1.17e-62 205
MS.gene004347.t1 MTR_3g052580 35.068 365 211 11 13 365 10 360 2.37e-62 205
MS.gene004347.t1 MTR_3g114120 34.516 310 196 5 30 336 45 350 6.68e-62 202
MS.gene004347.t1 MTR_2g100620 36.364 319 192 7 30 342 29 342 2.22e-61 201
MS.gene004347.t1 MTR_7g008060 33.934 333 202 5 13 341 11 329 3.87e-61 200
MS.gene004347.t1 MTR_8g014910 35.398 339 205 9 13 342 10 343 6.29e-61 200
MS.gene004347.t1 MTR_4g056280 36.392 316 193 6 30 341 28 339 6.60e-61 200
MS.gene004347.t1 MTR_5g084770 36.443 343 204 9 8 341 1 338 8.57e-61 199
MS.gene004347.t1 MTR_3g114090 34.839 310 194 6 31 336 35 340 9.04e-60 197
MS.gene004347.t1 MTR_3g464730 33.724 341 219 6 6 342 2 339 9.69e-60 196
MS.gene004347.t1 MTR_1g025680 34.821 336 204 8 11 336 8 338 1.01e-59 199
MS.gene004347.t1 MTR_8g075230 34.356 326 206 6 28 349 32 353 2.20e-58 193
MS.gene004347.t1 MTR_3g021460 33.520 358 216 9 11 364 10 349 3.05e-56 187
MS.gene004347.t1 MTR_5g078210 36.677 319 190 11 6 319 1 312 3.31e-56 187
MS.gene004347.t1 MTR_5g022640 32.915 319 205 6 28 341 39 353 4.21e-56 187
MS.gene004347.t1 MTR_0009s0250 33.528 343 201 12 13 346 12 336 1.03e-55 186
MS.gene004347.t1 MTR_2g461580 31.793 368 228 9 1 364 1 349 1.71e-55 186
MS.gene004347.t1 MTR_5g022630 30.966 352 231 9 6 349 15 362 2.08e-55 186
MS.gene004347.t1 MTR_2g015080 30.994 342 214 9 14 337 15 352 6.65e-54 182
MS.gene004347.t1 MTR_5g074270 34.177 316 198 7 34 343 35 346 2.83e-53 180
MS.gene004347.t1 MTR_2g017925 39.004 241 134 5 125 364 23 251 4.25e-53 177
MS.gene004347.t1 MTR_8g075200 31.464 321 212 6 28 344 37 353 6.74e-53 180
MS.gene004347.t1 MTR_2g017895 35.294 289 159 6 79 365 5 267 1.04e-52 176
MS.gene004347.t1 MTR_8g075220 30.395 329 220 6 28 349 36 362 2.20e-52 178
MS.gene004347.t1 MTR_5g093090 37.801 291 162 10 13 292 8 290 4.43e-47 162
MS.gene004347.t1 MTR_4g087985 31.746 315 200 8 34 337 38 348 2.15e-46 162
MS.gene004347.t1 MTR_5g083040 31.498 327 201 8 29 341 29 346 2.60e-46 162
MS.gene004347.t1 MTR_2g044100 34.118 340 203 12 34 362 45 374 3.33e-46 162
MS.gene004347.t1 MTR_1g025910 32.915 319 196 6 37 351 41 345 1.18e-44 158
MS.gene004347.t1 MTR_8g074580 31.965 341 216 7 28 360 40 372 1.56e-44 158
MS.gene004347.t1 MTR_8g022790 30.189 371 232 12 6 365 7 361 3.74e-44 156
MS.gene004347.t1 MTR_8g022810 29.582 311 206 6 34 337 43 347 3.08e-43 154
MS.gene004347.t1 MTR_8g031390 29.651 344 214 9 24 355 29 356 4.31e-43 154
MS.gene004347.t1 MTR_0127s0040 31.818 242 160 4 125 365 1 238 1.76e-42 148
MS.gene004347.t1 MTR_8g074560 29.730 370 235 11 6 364 12 367 1.97e-42 152
MS.gene004347.t1 MTR_8g031420 28.977 352 227 9 16 357 19 357 5.70e-42 150
MS.gene004347.t1 MTR_8g031400 30.030 333 211 8 24 347 29 348 1.00e-41 150
MS.gene004347.t1 MTR_5g087690 30.029 343 211 8 34 364 52 377 1.91e-40 147
MS.gene004347.t1 MTR_8g031430 29.341 334 214 8 24 348 29 349 1.63e-39 144
MS.gene004347.t1 MTR_8g031390 30.508 295 183 7 24 312 29 307 1.10e-37 138
MS.gene004347.t1 MTR_3g011860 64.835 91 32 0 232 322 232 322 4.69e-36 134
MS.gene004347.t1 MTR_1g079590 35.859 198 124 3 13 208 12 208 5.05e-35 128
MS.gene004347.t1 MTR_7g087190 27.577 359 223 9 29 359 40 389 3.48e-34 130
MS.gene004347.t1 MTR_7g033155 25.313 399 240 10 7 357 6 394 1.33e-32 126
MS.gene004347.t1 MTR_5g093090 40.291 206 107 9 13 207 8 208 5.84e-32 120
MS.gene004347.t1 MTR_1g030340 27.838 370 219 10 4 341 14 367 5.92e-32 124
MS.gene004347.t1 MTR_8g089805 27.763 371 230 11 6 347 12 373 1.59e-30 120
MS.gene004347.t1 MTR_1g030268 27.487 382 235 12 8 361 13 380 4.74e-30 119
MS.gene004347.t1 MTR_7g033150 24.409 381 241 10 14 357 10 380 1.82e-29 117
MS.gene004347.t1 MTR_8g028160 25.967 362 223 10 34 365 38 384 2.51e-29 117
MS.gene004347.t1 MTR_1g030230 27.202 386 244 11 1 361 1 374 5.60e-29 115
MS.gene004347.t1 MTR_1g030275 27.247 356 224 10 11 341 16 361 7.67e-29 115
MS.gene004347.t1 MTR_7g111780 26.012 346 229 8 25 357 29 360 1.66e-28 114
MS.gene004347.t1 MTR_7g116870 25.260 384 231 12 9 356 7 370 1.98e-28 114
MS.gene004347.t1 MTR_1g030220 26.720 378 226 11 1 341 1 364 3.28e-28 114
MS.gene004347.t1 MTR_8g038680 28.779 344 200 9 31 344 27 355 3.88e-28 113
MS.gene004347.t1 MTR_8g022810 26.452 310 162 8 34 336 43 293 1.31e-27 111
MS.gene004347.t1 MTR_2g087292 27.941 340 155 12 13 346 12 267 2.00e-27 109
MS.gene004347.t1 MTR_6g007100 28.116 345 211 11 31 357 32 357 4.13e-27 110
MS.gene004347.t1 MTR_1108s0010 30.952 210 130 4 133 341 3 198 4.15e-27 107
MS.gene004347.t1 MTR_6g007090 28.488 344 200 10 29 344 36 361 7.43e-27 110
MS.gene004347.t1 MTR_6g007095 27.476 313 199 8 59 357 394 692 1.31e-26 111
MS.gene004347.t1 MTR_6g007095 27.809 356 209 12 31 357 40 376 2.71e-23 101
MS.gene004347.t1 MTR_1g060500 25.816 337 216 10 34 357 42 357 2.34e-26 108
MS.gene004347.t1 MTR_5g074210 37.226 137 85 1 208 343 66 202 8.94e-26 103
MS.gene004347.t1 MTR_4g036375 40.132 152 86 4 30 178 28 177 2.11e-25 102
MS.gene004347.t1 MTR_7g033165 26.629 353 223 10 31 357 32 374 4.77e-25 105
MS.gene004347.t1 MTR_1g060490 27.445 317 192 12 34 337 39 330 4.89e-25 104
MS.gene004347.t1 MTR_2g015630 27.576 330 205 12 37 342 36 355 1.95e-24 103
MS.gene004347.t1 MTR_3g463960 24.706 340 209 11 34 343 46 368 5.31e-24 102
MS.gene004347.t1 MTR_3g463950 24.706 340 209 11 34 343 46 368 5.31e-24 102
MS.gene004347.t1 MTR_3g463970 24.706 340 209 11 34 343 46 368 5.31e-24 102
MS.gene004347.t1 MTR_3g463940 24.706 340 209 11 34 343 46 368 5.31e-24 102
MS.gene004347.t1 MTR_7g113860 25.000 368 224 11 26 357 23 374 1.27e-23 100
MS.gene004347.t1 MTR_3g463930 24.706 340 216 11 34 343 46 375 1.65e-23 100
MS.gene004347.t1 MTR_7g113860 25.193 389 233 13 10 357 9 380 3.36e-23 99.8
MS.gene004347.t1 MTR_7g104220 26.562 320 192 11 34 337 44 336 1.25e-22 97.8
MS.gene004347.t1 MTR_6g049220 52.809 89 39 2 30 115 28 116 4.17e-22 92.4
MS.gene004347.t1 MTR_1g082390 24.457 368 231 10 8 344 7 358 1.28e-21 95.1
MS.gene004347.t1 MTR_7g111780 28.431 204 133 4 162 357 63 261 1.57e-21 93.2
MS.gene004347.t1 MTR_8g089805 26.761 284 176 8 91 347 27 305 1.86e-21 94.0
MS.gene004347.t1 MTR_4g104240 24.234 359 238 10 6 341 8 355 2.61e-21 94.4
MS.gene004347.t1 MTR_1g030268 28.000 300 186 9 11 292 16 303 6.32e-21 92.8
MS.gene004347.t1 MTR_1g030265 26.087 299 182 8 91 361 60 347 1.17e-20 92.0
MS.gene004347.t1 MTR_2g043980 25.490 357 222 14 9 343 7 341 1.99e-20 91.7
MS.gene004347.t1 MTR_8g012540 28.618 304 180 9 31 312 27 315 2.05e-20 91.3
MS.gene004347.t1 MTR_1g092740 25.223 337 190 12 34 345 40 339 2.71e-20 91.3
MS.gene004347.t1 MTR_2g015590 25.904 332 212 10 32 338 28 350 4.45e-19 87.8
MS.gene004347.t1 MTR_1g092690 26.168 321 190 11 34 337 53 343 6.69e-19 87.4
MS.gene004347.t1 MTR_2g015580 25.378 331 215 11 34 342 49 369 7.98e-19 87.4
MS.gene004347.t1 MTR_3g069780 23.724 333 218 14 34 343 32 351 1.58e-18 86.3
MS.gene004347.t1 MTR_3g438030 23.724 333 218 14 34 343 32 351 3.45e-18 85.5
MS.gene004347.t1 MTR_1g092750 25.545 321 194 13 34 337 42 334 3.97e-18 85.1
MS.gene004347.t1 MTR_2g015650 27.928 333 206 13 34 343 33 354 1.36e-17 83.6
MS.gene004347.t1 MTR_1g079570 27.737 137 97 2 226 362 4 138 6.71e-17 77.4
MS.gene004347.t1 MTR_7g113860 24.092 303 183 9 88 357 18 306 1.54e-16 79.7
MS.gene004347.t1 MTR_2g015670 26.946 334 194 13 34 343 33 340 3.17e-15 76.6
MS.gene004347.t1 MTR_2g087190 49.367 79 15 1 237 315 93 146 4.32e-15 73.2
MS.gene004347.t1 MTR_5g084880 35.849 106 68 0 187 292 7 112 6.48e-15 71.6
MS.gene004347.t1 MTR_1g092760 26.087 322 190 12 34 337 41 332 9.22e-15 75.1
MS.gene004347.t1 MTR_8g062580 33.051 118 72 3 227 343 67 178 1.83e-14 72.8
MS.gene004347.t1 MTR_4g056220 34.259 108 68 2 235 341 71 176 2.27e-14 71.2
MS.gene004347.t1 MTR_3g448360 22.455 334 222 12 34 343 31 351 2.69e-14 73.9
MS.gene004347.t1 MTR_3g069520 23.881 335 213 13 34 343 32 349 2.19e-13 70.9
MS.gene004347.t1 MTR_4g036385 30.476 105 72 1 241 344 22 126 1.50e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004347.t1 AT1G29670 74.790 357 82 4 14 365 78 431 0.0 544
MS.gene004347.t1 AT1G29670 74.790 357 82 4 14 365 10 363 0.0 541
MS.gene004347.t1 AT5G45670 67.123 365 117 1 1 365 1 362 1.18e-179 503
MS.gene004347.t1 AT1G29660 65.915 355 120 1 11 365 11 364 6.06e-177 496
MS.gene004347.t1 AT4G18970 70.149 335 100 0 31 365 27 361 3.43e-174 489
MS.gene004347.t1 AT4G18970 70.149 335 100 0 31 365 27 361 8.24e-173 487
MS.gene004347.t1 AT1G33811 54.519 343 147 5 29 365 31 370 1.25e-125 366
MS.gene004347.t1 AT1G71691 47.564 349 175 6 17 365 43 383 1.18e-113 336
MS.gene004347.t1 AT5G08460 45.789 380 186 7 3 365 9 385 2.39e-111 330
MS.gene004347.t1 AT5G15720 46.045 354 180 7 20 365 14 364 7.42e-107 318
MS.gene004347.t1 AT1G71250 45.777 367 186 6 9 365 10 373 1.97e-106 317
MS.gene004347.t1 AT2G19010 43.220 354 182 6 13 364 11 347 9.24e-101 302
MS.gene004347.t1 AT2G19010 43.220 354 182 6 13 364 41 377 3.83e-100 301
MS.gene004347.t1 AT2G19050 43.440 343 173 6 26 365 25 349 3.95e-96 290
MS.gene004347.t1 AT2G19060 43.827 324 162 6 28 346 26 334 3.05e-93 283
MS.gene004347.t1 AT4G30140 47.493 339 153 8 28 362 29 346 1.23e-89 273
MS.gene004347.t1 AT1G71691 44.161 274 149 4 92 365 13 282 5.95e-84 256
MS.gene004347.t1 AT1G71691 47.464 276 138 5 17 292 43 311 9.52e-83 254
MS.gene004347.t1 AT2G19050 47.826 253 124 2 26 278 25 269 1.02e-82 253
MS.gene004347.t1 AT5G15720 43.750 288 156 5 82 365 48 333 2.43e-81 251
MS.gene004347.t1 AT5G15720 45.552 281 143 6 20 292 14 292 4.00e-77 240
MS.gene004347.t1 AT4G10950 37.278 338 206 5 30 364 69 403 1.54e-75 239
MS.gene004347.t1 AT2G23540 40.252 318 183 5 34 344 50 367 2.79e-74 235
MS.gene004347.t1 AT4G10950 36.391 338 205 5 30 364 69 399 8.89e-72 229
MS.gene004347.t1 AT5G33370 36.119 335 209 5 33 365 31 362 5.57e-71 226
MS.gene004347.t1 AT3G50400 38.298 329 193 7 25 344 27 354 1.12e-70 226
MS.gene004347.t1 AT5G37690 37.658 316 189 7 34 346 29 339 2.01e-70 224
MS.gene004347.t1 AT3G04290 39.683 315 178 7 33 341 30 338 4.39e-68 219
MS.gene004347.t1 AT4G28780 38.217 314 184 6 33 341 32 340 4.38e-67 216
MS.gene004347.t1 AT1G74460 37.061 313 189 7 34 342 25 333 7.61e-67 215
MS.gene004347.t1 AT5G55050 38.438 333 188 9 20 341 27 353 2.71e-65 212
MS.gene004347.t1 AT2G42990 35.693 339 209 7 13 347 10 343 2.72e-65 211
MS.gene004347.t1 AT5G18430 38.679 318 185 5 33 344 29 342 3.60e-65 211
MS.gene004347.t1 AT3G53100 37.725 334 198 7 14 342 11 339 4.94e-65 210
MS.gene004347.t1 AT5G37690 33.721 344 212 8 6 346 1 331 8.11e-65 209
MS.gene004347.t1 AT1G75880 36.991 319 188 8 30 341 50 362 4.58e-63 206
MS.gene004347.t1 AT1G75880 37.304 319 186 9 30 341 50 361 6.84e-63 205
MS.gene004347.t1 AT2G04570 34.218 339 215 6 14 348 10 344 1.05e-62 204
MS.gene004347.t1 AT5G22810 35.938 320 194 7 30 342 32 347 4.05e-62 203
MS.gene004347.t1 AT5G42170 34.385 317 195 7 30 341 48 356 5.24e-62 203
MS.gene004347.t1 AT3G14820 32.571 350 215 10 5 344 2 340 8.91e-62 202
MS.gene004347.t1 AT1G75890 34.954 329 197 10 28 347 43 363 1.71e-61 201
MS.gene004347.t1 AT1G75890 34.954 329 197 10 28 347 72 392 2.61e-61 202
MS.gene004347.t1 AT5G41890 35.150 367 211 9 18 365 17 375 5.66e-61 201
MS.gene004347.t1 AT1G75890 33.724 341 198 10 28 347 43 376 2.19e-59 196
MS.gene004347.t1 AT5G03810 34.535 333 208 8 16 342 13 341 4.53e-59 195
MS.gene004347.t1 AT5G03820 34.384 349 218 8 1 342 1 345 9.45e-59 194
MS.gene004347.t1 AT5G03820 35.329 334 205 8 16 342 44 373 2.31e-58 194
MS.gene004347.t1 AT3G16370 34.154 325 203 8 24 342 22 341 7.03e-58 192
MS.gene004347.t1 AT4G26790 33.648 318 203 6 29 342 26 339 1.74e-57 191
MS.gene004347.t1 AT4G26790 33.648 318 203 6 29 342 26 339 1.74e-57 191
MS.gene004347.t1 AT1G75900 32.595 316 204 6 30 341 41 351 2.24e-57 191
MS.gene004347.t1 AT1G59406 33.333 345 207 10 9 341 3 336 3.45e-57 190
MS.gene004347.t1 AT1G59030 33.333 345 207 10 9 341 3 336 3.45e-57 190
MS.gene004347.t1 AT1G58725 33.333 345 207 10 9 341 3 336 3.45e-57 190
MS.gene004347.t1 AT4G16230 40.000 240 138 5 13 248 10 247 4.88e-56 184
MS.gene004347.t1 AT2G31540 35.016 317 198 7 31 342 34 347 6.79e-56 187
MS.gene004347.t1 AT2G24560 34.591 318 198 8 31 342 33 346 1.45e-55 186
MS.gene004347.t1 AT1G20132 34.603 315 192 7 28 335 57 364 8.46e-55 184
MS.gene004347.t1 AT1G20135 32.024 331 205 8 10 335 5 320 5.67e-54 181
MS.gene004347.t1 AT2G30310 33.956 321 196 9 31 342 33 346 1.72e-52 178
MS.gene004347.t1 AT5G63170 33.742 326 196 7 14 335 10 319 1.89e-52 177
MS.gene004347.t1 AT5G33370 37.262 263 161 4 32 292 30 290 2.40e-52 177
MS.gene004347.t1 AT2G30220 33.232 328 189 9 31 342 32 345 3.17e-52 177
MS.gene004347.t1 AT1G20120 31.761 318 209 6 31 344 77 390 3.26e-52 178
MS.gene004347.t1 AT2G03980 33.739 329 198 9 31 350 42 359 3.30e-52 177
MS.gene004347.t1 AT2G03980 33.739 329 198 9 31 350 42 359 3.30e-52 177
MS.gene004347.t1 AT2G03980 33.739 329 198 9 31 350 42 359 3.30e-52 177
MS.gene004347.t1 AT2G03980 33.739 329 198 9 31 350 42 359 3.30e-52 177
MS.gene004347.t1 AT1G58520 32.308 325 194 10 25 341 23 329 9.05e-52 176
MS.gene004347.t1 AT1G58525 32.308 325 194 10 25 341 23 329 9.05e-52 176
MS.gene004347.t1 AT1G58430 33.019 318 203 8 31 342 34 347 9.97e-51 173
MS.gene004347.t1 AT1G73610 33.739 329 191 8 24 342 21 332 1.32e-49 170
MS.gene004347.t1 AT1G06990 32.390 318 204 7 31 342 36 348 2.82e-49 169
MS.gene004347.t1 AT1G23500 33.233 331 195 8 24 344 21 335 8.77e-49 168
MS.gene004347.t1 AT1G20130 31.611 329 206 8 28 343 180 502 3.95e-48 170
MS.gene004347.t1 AT1G20130 31.611 329 206 8 28 343 200 522 6.41e-48 170
MS.gene004347.t1 AT2G40250 30.218 321 210 7 34 345 38 353 3.89e-47 164
MS.gene004347.t1 AT3G43570 29.912 341 195 9 9 341 3 307 5.68e-47 162
MS.gene004347.t1 AT5G45950 30.564 337 222 9 12 345 20 347 3.37e-46 161
MS.gene004347.t1 AT1G53920 29.714 350 221 7 30 365 46 384 1.29e-43 155
MS.gene004347.t1 AT1G71120 31.118 331 203 9 27 347 26 341 5.98e-43 153
MS.gene004347.t1 AT3G43550 31.864 295 182 9 6 292 3 286 2.48e-42 149
MS.gene004347.t1 AT5G45960 28.797 316 213 7 28 335 43 354 2.42e-41 149
MS.gene004347.t1 AT1G75930 30.696 316 199 9 34 343 31 332 3.30e-40 145
MS.gene004347.t1 AT1G75920 29.619 341 216 8 15 344 6 333 1.42e-39 144
MS.gene004347.t1 AT2G24560 33.088 272 172 8 31 296 33 300 5.73e-37 136
MS.gene004347.t1 AT1G75910 30.117 342 215 10 14 344 5 333 2.29e-36 135
MS.gene004347.t1 AT1G75920 28.487 337 208 8 28 344 20 343 1.11e-35 133
MS.gene004347.t1 AT5G40990 30.031 323 204 8 34 343 39 352 1.14e-35 134
MS.gene004347.t1 AT3G14225 30.094 319 209 7 34 343 39 352 3.66e-35 132
MS.gene004347.t1 AT3G14225 29.907 321 211 7 34 343 39 356 8.94e-35 131
MS.gene004347.t1 AT2G04020 36.620 213 121 5 31 238 42 245 1.95e-34 128
MS.gene004347.t1 AT2G04020 36.538 208 118 5 31 233 42 240 6.96e-33 125
MS.gene004347.t1 AT1G53940 28.659 328 216 8 34 350 41 361 3.06e-32 124
MS.gene004347.t1 AT1G09390 27.273 374 243 9 1 356 1 363 3.79e-32 124
MS.gene004347.t1 AT3G05180 28.378 370 209 14 26 359 30 379 4.87e-32 124
MS.gene004347.t1 AT1G53990 28.483 323 210 8 34 347 37 347 2.81e-31 122
MS.gene004347.t1 AT2G31550 30.622 209 142 3 137 344 2 208 3.39e-31 118
MS.gene004347.t1 AT1G56670 26.503 366 231 10 11 356 19 366 1.60e-30 120
MS.gene004347.t1 AT3G27950 25.532 376 242 9 6 356 3 365 1.98e-30 119
MS.gene004347.t1 AT1G75920 27.961 304 201 7 46 344 15 305 5.12e-30 117
MS.gene004347.t1 AT1G54790 26.440 382 234 11 10 356 7 376 5.14e-30 119
MS.gene004347.t1 AT1G75920 26.844 339 197 8 15 344 6 302 1.66e-29 116
MS.gene004347.t1 AT4G16233 42.636 129 72 2 238 365 3 130 2.16e-29 110
MS.gene004347.t1 AT3G62280 28.746 327 209 10 27 341 31 345 8.85e-29 115
MS.gene004347.t1 AT3G26430 26.836 354 223 10 31 357 30 374 7.75e-28 112
MS.gene004347.t1 AT1G54020 26.377 345 227 11 11 348 9 333 1.05e-27 112
MS.gene004347.t1 AT1G67830 26.100 341 214 9 29 341 27 357 1.58e-27 112
MS.gene004347.t1 AT3G48460 25.762 361 231 13 8 342 8 357 4.37e-27 110
MS.gene004347.t1 AT1G54790 23.834 386 248 10 6 356 1 375 9.15e-26 107
MS.gene004347.t1 AT3G09930 27.329 322 191 14 34 337 41 337 8.29e-25 103
MS.gene004347.t1 AT3G09930 27.329 322 191 14 34 337 41 337 8.29e-25 103
MS.gene004347.t1 AT1G54030 26.959 319 204 11 34 348 54 347 1.09e-24 104
MS.gene004347.t1 AT1G28640 25.287 348 217 13 36 355 39 371 1.86e-24 103
MS.gene004347.t1 AT5G14450 26.912 353 222 11 31 357 40 382 5.97e-24 102
MS.gene004347.t1 AT5G03610 27.619 315 198 11 34 337 45 340 6.54e-24 101
MS.gene004347.t1 AT1G28600 24.468 376 235 13 13 355 7 366 1.49e-23 100
MS.gene004347.t1 AT1G53940 29.167 264 175 7 34 292 41 297 2.14e-23 99.4
MS.gene004347.t1 AT5G03600 24.845 322 202 9 28 337 10 303 2.41e-23 99.4
MS.gene004347.t1 AT1G31550 25.610 328 206 10 36 338 40 354 3.18e-23 100
MS.gene004347.t1 AT1G54010 25.000 372 251 12 1 362 1 354 4.90e-23 99.4
MS.gene004347.t1 AT5G03600 24.845 322 202 9 28 337 45 338 4.99e-23 99.0
MS.gene004347.t1 AT2G27360 27.108 332 208 12 36 343 37 358 3.08e-22 97.4
MS.gene004347.t1 AT1G28650 25.215 349 216 12 36 355 41 373 3.17e-22 97.1
MS.gene004347.t1 AT1G54000 24.661 369 242 13 8 362 8 354 3.36e-22 97.1
MS.gene004347.t1 AT4G16220 46.429 112 57 2 13 122 11 121 4.41e-22 94.4
MS.gene004347.t1 AT1G28570 24.791 359 226 14 16 343 13 358 5.00e-22 96.7
MS.gene004347.t1 AT4G01130 24.654 361 226 13 13 341 14 360 1.04e-21 95.5
MS.gene004347.t1 AT3G14220 27.762 353 215 13 24 362 24 350 1.73e-21 94.7
MS.gene004347.t1 AT1G54790 22.816 412 246 12 6 356 1 401 8.32e-21 93.2
MS.gene004347.t1 AT1G28580 23.161 367 244 12 13 351 13 369 1.48e-20 92.4
MS.gene004347.t1 AT1G28660 24.207 347 222 12 36 355 39 371 1.88e-20 92.0
MS.gene004347.t1 AT1G28670 23.977 342 230 11 36 355 39 372 3.15e-20 91.3
MS.gene004347.t1 AT1G56670 26.599 297 185 8 11 292 19 297 3.26e-20 90.1
MS.gene004347.t1 AT1G31550 24.848 330 203 11 36 338 40 351 4.54e-20 90.9
MS.gene004347.t1 AT1G28610 25.069 363 231 14 1 337 1 348 5.76e-20 90.5
MS.gene004347.t1 AT3G62280 27.586 261 170 7 27 280 31 279 9.03e-20 89.0
MS.gene004347.t1 AT1G28660 23.919 347 222 13 36 355 39 370 1.46e-19 89.4
MS.gene004347.t1 AT3G14210 26.946 334 199 15 34 349 38 344 1.85e-17 83.6
MS.gene004347.t1 AT2G36325 26.959 319 193 13 34 337 49 342 4.84e-17 82.0
MS.gene004347.t1 AT1G54020 23.413 252 172 6 100 348 14 247 4.65e-16 78.2
MS.gene004347.t1 AT1G54020 23.413 252 172 6 100 348 14 247 4.65e-16 78.2
MS.gene004347.t1 AT1G54020 23.413 252 172 6 100 348 14 247 4.65e-16 78.2
MS.gene004347.t1 AT1G54030 25.856 263 168 9 34 292 54 293 8.53e-15 74.7
MS.gene004347.t1 AT1G54020 24.500 200 143 4 152 348 4 198 9.11e-15 73.6
MS.gene004347.t1 AT4G01130 25.871 201 123 6 160 341 81 274 9.92e-15 74.3
MS.gene004347.t1 AT1G28600 28.814 177 102 7 13 172 7 176 1.81e-12 66.6
MS.gene004347.t1 AT5G03590 37.838 111 59 4 3 110 8 111 3.73e-11 62.4

Find 76 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATCTATGTAAATGTTTA+TGG 0.116985 2.4:+67977036 MS.gene004347:CDS
TCCCAATTGGTAAATTATTT+TGG 0.123489 2.4:+67976487 MS.gene004347:CDS
ATAGGAATGGGTTCTTATTT+TGG 0.148038 2.4:+67977467 MS.gene004347:CDS
TTCTACCATCTGGACTGTTT+TGG 0.208325 2.4:-67976918 None:intergenic
GCAAGGAAAATGGCATTATT+TGG 0.226099 2.4:+67976859 MS.gene004347:CDS
AAAGCTAATTACTTACCTTA+TGG 0.274170 2.4:+67975590 MS.gene004347:CDS
GAAGCTGGAAATAGTGTTAT+TGG 0.291749 2.4:+67977508 MS.gene004347:CDS
TAATTATGGGGCAAGGAAAA+TGG 0.308096 2.4:+67976849 MS.gene004347:CDS
CCTTATGGAATTGACTTTCC+TGG 0.310132 2.4:+67975605 MS.gene004347:CDS
CTCCAAAATAATTTACCAAT+TGG 0.315553 2.4:-67976489 None:intergenic
GGAGACTCTTTGGTGGATAA+TGG 0.317349 2.4:+67975539 MS.gene004347:CDS
TTATTTGGAGTTGGTCAAAT+AGG 0.339134 2.4:+67976874 MS.gene004347:CDS
AGCAAGTGCATTTATACAAT+TGG 0.341319 2.4:+67976538 MS.gene004347:CDS
GACTTTCCTGGCGGACCAAC+TGG 0.344384 2.4:+67975617 MS.gene004347:CDS
ACCTCTCTATGATTAATATA+GGG 0.359317 2.4:+67975444 MS.gene004347:CDS
TTGAGTTTGTGGAGTGGAAT+TGG 0.370240 2.4:+67975482 MS.gene004347:CDS
GACCTCTCTATGATTAATAT+AGG 0.379454 2.4:+67975443 MS.gene004347:CDS
AAATTTAACAGCTGAGCAAT+TGG 0.383884 2.4:+67976195 MS.gene004347:intron
GTGCATTTATACAATTGGAT+TGG 0.387852 2.4:+67976543 MS.gene004347:CDS
CTACTAGTAGAATAGATTGT+AGG 0.390611 2.4:-67976598 None:intergenic
GGATTTAGAGTTACAAATGC+TGG 0.410117 2.4:+67977379 MS.gene004347:intron
TAGGCATGAAATAGTTGTTA+AGG 0.410823 2.4:-67976579 None:intergenic
TGCATTTATACAATTGGATT+GGG 0.411957 2.4:+67976544 MS.gene004347:CDS
TCCAAAATAATTTACCAATT+GGG 0.418563 2.4:-67976488 None:intergenic
AATTTAACAGCTGAGCAATT+GGG 0.419050 2.4:+67976196 MS.gene004347:intron
CCAATTGGGACACTGTCCTT+TGG 0.421179 2.4:-67976474 None:intergenic
AACCTTCCAGTTGGTCCGCC+AGG 0.439561 2.4:-67975623 None:intergenic
TGACTCCTCTCAGTATTTGT+CGG 0.442316 2.4:-67976258 None:intergenic
GCCCTTTCAACCTGCATGTA+GGG 0.443708 2.4:+67977444 MS.gene004347:CDS
GCTGAGCAATTGGGGTTCAA+TGG 0.449798 2.4:+67976205 MS.gene004347:intron
AATTATGCTTCAGCAGCTGC+TGG 0.456416 2.4:+67976280 MS.gene004347:CDS
AGAAGAAACAGGACAACAAT+TGG 0.456656 2.4:+67976309 MS.gene004347:CDS
GCTAAACGATTAATATCAAT+AGG 0.459606 2.4:-67977571 None:intergenic
ACATAGATGAATCTTGCATC+AGG 0.464951 2.4:-67977024 None:intergenic
AAAATGGCATTATTTGGAGT+TGG 0.465463 2.4:+67976865 MS.gene004347:CDS
GCATTCCATCCAACTGAAGC+TGG 0.466707 2.4:+67977493 MS.gene004347:CDS
TATTTCCAGCTTCAGTTGGA+TGG 0.471745 2.4:-67977498 None:intergenic
AAGCATATGCTCAGCAACTC+AGG 0.475429 2.4:+67976659 MS.gene004347:CDS
GCTACACATGTTCTACCATC+TGG 0.484122 2.4:-67976928 None:intergenic
AAATAATTACCATAGGATGA+TGG 0.485604 2.4:-67977084 None:intergenic
ATCCCTACATGCAGGTTGAA+AGG 0.488239 2.4:-67977446 None:intergenic
TCCCTACATGCAGGTTGAAA+GGG 0.491272 2.4:-67977445 None:intergenic
AATAATTACCATAGGATGAT+GGG 0.493093 2.4:-67977083 None:intergenic
TAATATAGGGATAGTAGTGT+TGG 0.495285 2.4:+67975457 MS.gene004347:CDS
ACACTATTTCCAGCTTCAGT+TGG 0.498634 2.4:-67977502 None:intergenic
CCAAAGGACAGTGTCCCAAT+TGG 0.502815 2.4:+67976474 MS.gene004347:CDS
GCTGGAATCAGAGAAGAAAC+AGG 0.503846 2.4:+67976298 MS.gene004347:CDS
GCAAATCAATTATTCAACAA+TGG 0.525590 2.4:+67976964 MS.gene004347:CDS
TGCCCTTTCAACCTGCATGT+AGG 0.528510 2.4:+67977443 MS.gene004347:CDS
CCAGGAAAGTCAATTCCATA+AGG 0.532610 2.4:-67975605 None:intergenic
AAAACCACTGTTGATGTCAT+TGG 0.535324 2.4:+67975656 MS.gene004347:CDS
ATTTAACAGCTGAGCAATTG+GGG 0.548458 2.4:+67976197 MS.gene004347:intron
CTGCATGTAGGGATAGGAAT+GGG 0.549161 2.4:+67977455 MS.gene004347:CDS
ATAACCAGCCCATCATCCTA+TGG 0.566345 2.4:+67977075 MS.gene004347:CDS
GCTGAGCATATGCTTGAAGA+AGG 0.570230 2.4:-67976651 None:intergenic
CCGTTGGAAAACCTTCCAGT+TGG 0.572941 2.4:-67975632 None:intergenic
TTCCTGGCGGACCAACTGGA+AGG 0.581746 2.4:+67975621 MS.gene004347:CDS
CCTGCATGTAGGGATAGGAA+TGG 0.583234 2.4:+67977454 MS.gene004347:CDS
TTCAACCTGCATGTAGGGAT+AGG 0.585091 2.4:+67977449 MS.gene004347:CDS
ATTACCATAGGATGATGGGC+TGG 0.593277 2.4:-67977079 None:intergenic
CCTTCCTATGCATCAGCTAG+AGG 0.593466 2.4:+67976235 MS.gene004347:CDS
AATGCTGGATGCTGTGGTGT+AGG 0.601465 2.4:+67977394 MS.gene004347:CDS
CCATTCCTATCCCTACATGC+AGG 0.604308 2.4:-67977454 None:intergenic
AGCATATGCTCAGCAACTCA+GGG 0.609775 2.4:+67976660 MS.gene004347:CDS
TTGGCCCAAAACAGTCCAGA+TGG 0.615814 2.4:+67976913 MS.gene004347:CDS
AGGACATTAGCATATTGTTG+AGG 0.616243 2.4:-67976631 None:intergenic
AGGTTGCACCCCAAATGCAT+TGG 0.618893 2.4:+67976894 MS.gene004347:CDS
TCGGCCTCTAGCTGATGCAT+AGG 0.621799 2.4:-67976239 None:intergenic
TCCCTATATTAATCATAGAG+AGG 0.629627 2.4:-67975445 None:intergenic
GACAAGTGCAAAATTACCAA+AGG 0.632000 2.4:+67976458 MS.gene004347:CDS
CCTCTAGCTGATGCATAGGA+AGG 0.633798 2.4:-67976235 None:intergenic
GTTACAAATGCTGGATGCTG+TGG 0.642532 2.4:+67977388 MS.gene004347:CDS
AGAGGCCGACAAATACTGAG+AGG 0.678735 2.4:+67976253 MS.gene004347:CDS
TATGGAATTGACTTTCCTGG+CGG 0.683663 2.4:+67975608 MS.gene004347:CDS
CTCACCAATGACATCAACAG+TGG 0.697219 2.4:-67975660 None:intergenic
TGTGGTGTAGGAAGAAACAA+CGG 0.771390 2.4:+67977406 MS.gene004347:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTCAGATTTTATATAATTA+TGG + chr2.4:67976835-67976854 MS.gene004347:intron 10.0%
!!! TTCAGATTTTATATAATTAT+GGG + chr2.4:67976836-67976855 MS.gene004347:intron 10.0%
!! ATAAAAATTTCAATTACCAA+AGG - chr2.4:67976775-67976794 None:intergenic 15.0%
!! TACAAAATAGTGATAAATTA+TGG - chr2.4:67976415-67976434 None:intergenic 15.0%
!!! AACAATTTAATTTTGCAATT+GGG + chr2.4:67976742-67976761 MS.gene004347:intron 15.0%
!!! ATAATTTATCACTATTTTGT+AGG + chr2.4:67976414-67976433 MS.gene004347:intron 15.0%
!!! ATATTTTTGTTCTAATTTTC+AGG + chr2.4:67977358-67977377 MS.gene004347:intron 15.0%
!!! ATTTTGTTATTCAATAGTTT+GGG + chr2.4:67975823-67975842 MS.gene004347:intron 15.0%
!!! TAACAATTTAATTTTGCAAT+TGG + chr2.4:67976741-67976760 MS.gene004347:intron 15.0%
!!! TAATTTATCACTATTTTGTA+GGG + chr2.4:67976415-67976434 MS.gene004347:intron 15.0%
!!! TATAAGAATATTTTGAATCT+TGG + chr2.4:67976010-67976029 MS.gene004347:intron 15.0%
!!! TCAGATTTTATATAATTATG+GGG + chr2.4:67976837-67976856 MS.gene004347:intron 15.0%
!! AATATATGAACAACCTAAAA+AGG + chr2.4:67977217-67977236 MS.gene004347:intron 20.0%
!! TCCAAAATAATTTACCAATT+GGG - chr2.4:67976491-67976510 None:intergenic 20.0%
!! TTCATCTATGTAAATGTTTA+TGG + chr2.4:67977036-67977055 MS.gene004347:CDS 20.0%
!!! GATTATCTTTTTTCTTCATT+TGG + chr2.4:67976366-67976385 MS.gene004347:intron 20.0%
!!! GATTTTGTTATTCAATAGTT+TGG + chr2.4:67975822-67975841 MS.gene004347:intron 20.0%
!!! TGTGAATTTAAGCTATTTTA+GGG - chr2.4:67977113-67977132 None:intergenic 20.0%
!!! TTGTGAATTTAAGCTATTTT+AGG - chr2.4:67977114-67977133 None:intergenic 20.0%
! AAAGCTAATTACTTACCTTA+TGG + chr2.4:67975590-67975609 MS.gene004347:CDS 25.0%
! AAATAATTACCATAGGATGA+TGG - chr2.4:67977087-67977106 None:intergenic 25.0%
! AATAATTACCATAGGATGAT+GGG - chr2.4:67977086-67977105 None:intergenic 25.0%
! ACCTCTCTATGATTAATATA+GGG + chr2.4:67975444-67975463 MS.gene004347:CDS 25.0%
! CTCCAAAATAATTTACCAAT+TGG - chr2.4:67976492-67976511 None:intergenic 25.0%
! GCAAATCAATTATTCAACAA+TGG + chr2.4:67976964-67976983 MS.gene004347:CDS 25.0%
! GCTAAACGATTAATATCAAT+AGG - chr2.4:67977574-67977593 None:intergenic 25.0%
! TACTCTTGTCTAACATTTAA+TGG + chr2.4:67976172-67976191 MS.gene004347:intron 25.0%
! TCTCCAAAAATAAAATAGCA+AGG - chr2.4:67975524-67975543 None:intergenic 25.0%
! TGCATTTATACAATTGGATT+GGG + chr2.4:67976544-67976563 MS.gene004347:CDS 25.0%
!! ACACAACAATTGAACTTTTA+AGG - chr2.4:67976810-67976829 None:intergenic 25.0%
!! TCCCAATTGGTAAATTATTT+TGG + chr2.4:67976487-67976506 MS.gene004347:CDS 25.0%
!! TTTTATATAATTATGGGGCA+AGG + chr2.4:67976842-67976861 MS.gene004347:CDS 25.0%
!!! ATGTATTTTTTCATCAGAGA+CGG + chr2.4:67976700-67976719 MS.gene004347:intron 25.0%
!!! CAATTTTTGAAGTCAAAGTT+TGG + chr2.4:67977139-67977158 MS.gene004347:intron 25.0%
!!! GTACCTTGCTATTTTATTTT+TGG + chr2.4:67975518-67975537 MS.gene004347:CDS 25.0%
!!! TTTTATTTTTGGAGACTCTT+TGG + chr2.4:67975529-67975548 MS.gene004347:CDS 25.0%
AAACTAGAGTAATACTGATC+TGG - chr2.4:67976068-67976087 None:intergenic 30.0%
AAATTTAACAGCTGAGCAAT+TGG + chr2.4:67976195-67976214 MS.gene004347:intron 30.0%
AATTTAACAGCTGAGCAATT+GGG + chr2.4:67976196-67976215 MS.gene004347:intron 30.0%
AGCAAGTGCATTTATACAAT+TGG + chr2.4:67976538-67976557 MS.gene004347:CDS 30.0%
AGGGAGAAAATAATTACCAT+AGG - chr2.4:67977094-67977113 None:intergenic 30.0%
ATGGAAAATAGTTAAGCATG+TGG - chr2.4:67976396-67976415 None:intergenic 30.0%
CATTGCATTCTTAATTAGCT+AGG + chr2.4:67975764-67975783 MS.gene004347:intron 30.0%
CTACTAGTAGAATAGATTGT+AGG - chr2.4:67976601-67976620 None:intergenic 30.0%
GACCTCTCTATGATTAATAT+AGG + chr2.4:67975443-67975462 MS.gene004347:CDS 30.0%
GTGCATTTATACAATTGGAT+TGG + chr2.4:67976543-67976562 MS.gene004347:CDS 30.0%
TAATATAGGGATAGTAGTGT+TGG + chr2.4:67975457-67975476 MS.gene004347:CDS 30.0%
TAGGCATGAAATAGTTGTTA+AGG - chr2.4:67976582-67976601 None:intergenic 30.0%
TCCCTATATTAATCATAGAG+AGG - chr2.4:67975448-67975467 None:intergenic 30.0%
! AAAATGGCATTATTTGGAGT+TGG + chr2.4:67976865-67976884 MS.gene004347:CDS 30.0%
! TTATTTGGAGTTGGTCAAAT+AGG + chr2.4:67976874-67976893 MS.gene004347:CDS 30.0%
!! ATAGGAATGGGTTCTTATTT+TGG + chr2.4:67977467-67977486 MS.gene004347:CDS 30.0%
!!! CAATGAGAAGTTGTTTTGAA+TGG - chr2.4:67975885-67975904 None:intergenic 30.0%
!!! TAGGAATGGGTTCTTATTTT+GGG + chr2.4:67977468-67977487 MS.gene004347:CDS 30.0%
AAAACCACTGTTGATGTCAT+TGG + chr2.4:67975656-67975675 MS.gene004347:CDS 35.0%
ACATAGATGAATCTTGCATC+AGG - chr2.4:67977027-67977046 None:intergenic 35.0%
AGAAGAAACAGGACAACAAT+TGG + chr2.4:67976309-67976328 MS.gene004347:CDS 35.0%
AGGACATTAGCATATTGTTG+AGG - chr2.4:67976634-67976653 None:intergenic 35.0%
ATTTAACAGCTGAGCAATTG+GGG + chr2.4:67976197-67976216 MS.gene004347:intron 35.0%
CTCAAATTAGAAGACTCACA+TGG - chr2.4:67977193-67977212 None:intergenic 35.0%
GAAGCTGGAAATAGTGTTAT+TGG + chr2.4:67977508-67977527 MS.gene004347:CDS 35.0%
GACAAGTGCAAAATTACCAA+AGG + chr2.4:67976458-67976477 MS.gene004347:CDS 35.0%
GCAAGGAAAATGGCATTATT+TGG + chr2.4:67976859-67976878 MS.gene004347:CDS 35.0%
TAATTATGGGGCAAGGAAAA+TGG + chr2.4:67976849-67976868 MS.gene004347:CDS 35.0%
TTTCTCTACTAATTCGTGTC+TGG - chr2.4:67977296-67977315 None:intergenic 35.0%
! CTTTTGCAATAGAAGTGAGT+TGG - chr2.4:67975574-67975593 None:intergenic 35.0%
! GGATTTAGAGTTACAAATGC+TGG + chr2.4:67977379-67977398 MS.gene004347:intron 35.0%
! GTTAAGATATCGTTTGCTAC+AGG + chr2.4:67975786-67975805 MS.gene004347:intron 35.0%
!!! GGACAACGAATTAGTTTTAG+AGG + chr2.4:67976436-67976455 MS.gene004347:CDS 35.0%
!!! TAGTGTTGGTTTTGAGTTTG+TGG + chr2.4:67975471-67975490 MS.gene004347:CDS 35.0%
!!! TATTTTTGGAGACTCTTTGG+TGG + chr2.4:67975532-67975551 MS.gene004347:CDS 35.0%
AAAGGTTGTCGTATGCACAT+TGG + chr2.4:67977235-67977254 MS.gene004347:intron 40.0%
ACACTATTTCCAGCTTCAGT+TGG - chr2.4:67977505-67977524 None:intergenic 40.0%
CCAGGAAAGTCAATTCCATA+AGG - chr2.4:67975608-67975627 None:intergenic 40.0%
TATTTCCAGCTTCAGTTGGA+TGG - chr2.4:67977501-67977520 None:intergenic 40.0%
TGACTCCTCTCAGTATTTGT+CGG - chr2.4:67976261-67976280 None:intergenic 40.0%
TGTGGTGTAGGAAGAAACAA+CGG + chr2.4:67977406-67977425 MS.gene004347:CDS 40.0%
TTGAGTTTGTGGAGTGGAAT+TGG + chr2.4:67975482-67975501 MS.gene004347:CDS 40.0%
! CCTTATGGAATTGACTTTCC+TGG + chr2.4:67975605-67975624 MS.gene004347:CDS 40.0%
! GTGCATACGACAACCTTTTT+AGG - chr2.4:67977233-67977252 None:intergenic 40.0%
! TATGGAATTGACTTTCCTGG+CGG + chr2.4:67975608-67975627 MS.gene004347:CDS 40.0%
! TCTACCATCTGGACTGTTTT+GGG - chr2.4:67976920-67976939 None:intergenic 40.0%
! TTCTACCATCTGGACTGTTT+TGG - chr2.4:67976921-67976940 None:intergenic 40.0%
!! TGTTTTGGGCCAATGCATTT+GGG - chr2.4:67976906-67976925 None:intergenic 40.0%
!!! TTGGTTTTGAGTTTGTGGAG+TGG + chr2.4:67975476-67975495 MS.gene004347:CDS 40.0%
AAGCATATGCTCAGCAACTC+AGG + chr2.4:67976659-67976678 MS.gene004347:CDS 45.0%
AATTATGCTTCAGCAGCTGC+TGG + chr2.4:67976280-67976299 MS.gene004347:CDS 45.0%
AGCATATGCTCAGCAACTCA+GGG + chr2.4:67976660-67976679 MS.gene004347:CDS 45.0%
ATAACCAGCCCATCATCCTA+TGG + chr2.4:67977075-67977094 MS.gene004347:CDS 45.0%
CTCACCAATGACATCAACAG+TGG - chr2.4:67975663-67975682 None:intergenic 45.0%
CTGCATGTAGGGATAGGAAT+GGG + chr2.4:67977455-67977474 MS.gene004347:CDS 45.0%
GCTACACATGTTCTACCATC+TGG - chr2.4:67976931-67976950 None:intergenic 45.0%
GCTGAGCATATGCTTGAAGA+AGG - chr2.4:67976654-67976673 None:intergenic 45.0%
GCTGGAATCAGAGAAGAAAC+AGG + chr2.4:67976298-67976317 MS.gene004347:CDS 45.0%
GTTACAAATGCTGGATGCTG+TGG + chr2.4:67977388-67977407 MS.gene004347:CDS 45.0%
TTCAACCTGCATGTAGGGAT+AGG + chr2.4:67977449-67977468 MS.gene004347:CDS 45.0%
! ATCCCTACATGCAGGTTGAA+AGG - chr2.4:67977449-67977468 None:intergenic 45.0%
! CCAACTGGAAGGTTTTCCAA+CGG + chr2.4:67975632-67975651 MS.gene004347:CDS 45.0%
! GGAGACTCTTTGGTGGATAA+TGG + chr2.4:67975539-67975558 MS.gene004347:CDS 45.0%
! TCCCTACATGCAGGTTGAAA+GGG - chr2.4:67977448-67977467 None:intergenic 45.0%
!! ATCAACAGTGGTTTTGCCGT+TGG - chr2.4:67975651-67975670 None:intergenic 45.0%
!! ATTACCATAGGATGATGGGC+TGG - chr2.4:67977082-67977101 None:intergenic 45.0%
!! CTGTTTTGGGCCAATGCATT+TGG - chr2.4:67976907-67976926 None:intergenic 45.0%
!! GTTTTGGGCCAATGCATTTG+GGG - chr2.4:67976905-67976924 None:intergenic 45.0%
AATGCTGGATGCTGTGGTGT+AGG + chr2.4:67977394-67977413 MS.gene004347:CDS 50.0%
AGAGGCCGACAAATACTGAG+AGG + chr2.4:67976253-67976272 MS.gene004347:CDS 50.0%
AGGTTGCACCCCAAATGCAT+TGG + chr2.4:67976894-67976913 MS.gene004347:CDS 50.0%
CCAAAGGACAGTGTCCCAAT+TGG + chr2.4:67976474-67976493 MS.gene004347:CDS 50.0%
CCAATTGGGACACTGTCCTT+TGG - chr2.4:67976477-67976496 None:intergenic 50.0%
CCATTCCTATCCCTACATGC+AGG - chr2.4:67977457-67977476 None:intergenic 50.0%
CCGTTGGAAAACCTTCCAGT+TGG - chr2.4:67975635-67975654 None:intergenic 50.0%
CCTCTAGCTGATGCATAGGA+AGG - chr2.4:67976238-67976257 None:intergenic 50.0%
CCTGCATGTAGGGATAGGAA+TGG + chr2.4:67977454-67977473 MS.gene004347:CDS 50.0%
CCTTCCTATGCATCAGCTAG+AGG + chr2.4:67976235-67976254 MS.gene004347:CDS 50.0%
GCAATTGGGACACTGTCCTT+TGG + chr2.4:67976756-67976775 MS.gene004347:intron 50.0%
GCATTCCATCCAACTGAAGC+TGG + chr2.4:67977493-67977512 MS.gene004347:CDS 50.0%
GCCCTTTCAACCTGCATGTA+GGG + chr2.4:67977444-67977463 MS.gene004347:CDS 50.0%
GCTGAGCAATTGGGGTTCAA+TGG + chr2.4:67976205-67976224 MS.gene004347:intron 50.0%
TGCCCTTTCAACCTGCATGT+AGG + chr2.4:67977443-67977462 MS.gene004347:CDS 50.0%
TTGGCCCAAAACAGTCCAGA+TGG + chr2.4:67976913-67976932 MS.gene004347:CDS 50.0%
TCGGCCTCTAGCTGATGCAT+AGG - chr2.4:67976242-67976261 None:intergenic 55.0%
AACCTTCCAGTTGGTCCGCC+AGG - chr2.4:67975626-67975645 None:intergenic 60.0%
! GACTTTCCTGGCGGACCAAC+TGG + chr2.4:67975617-67975636 MS.gene004347:CDS 60.0%
! TTCCTGGCGGACCAACTGGA+AGG + chr2.4:67975621-67975640 MS.gene004347:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 67975431 67977603 67975431 ID=MS.gene004347
chr2.4 mRNA 67975431 67977603 67975431 ID=MS.gene004347.t1;Parent=MS.gene004347
chr2.4 exon 67975431 67975677 67975431 ID=MS.gene004347.t1.exon1;Parent=MS.gene004347.t1
chr2.4 CDS 67975431 67975677 67975431 ID=cds.MS.gene004347.t1;Parent=MS.gene004347.t1
chr2.4 exon 67976206 67976330 67976206 ID=MS.gene004347.t1.exon2;Parent=MS.gene004347.t1
chr2.4 CDS 67976206 67976330 67976206 ID=cds.MS.gene004347.t1;Parent=MS.gene004347.t1
chr2.4 exon 67976436 67976681 67976436 ID=MS.gene004347.t1.exon3;Parent=MS.gene004347.t1
chr2.4 CDS 67976436 67976681 67976436 ID=cds.MS.gene004347.t1;Parent=MS.gene004347.t1
chr2.4 exon 67976841 67977096 67976841 ID=MS.gene004347.t1.exon4;Parent=MS.gene004347.t1
chr2.4 CDS 67976841 67977096 67976841 ID=cds.MS.gene004347.t1;Parent=MS.gene004347.t1
chr2.4 exon 67977380 67977603 67977380 ID=MS.gene004347.t1.exon5;Parent=MS.gene004347.t1
chr2.4 CDS 67977380 67977603 67977380 ID=cds.MS.gene004347.t1;Parent=MS.gene004347.t1
Gene Sequence

>MS.gene004347

ATGGCATTTTGGGACCTCTCTATGATTAATATAGGGATAGTAGTGTTGGTTTTGAGTTTGTGGAGTGGAATTGGAGTTGCACAACAAGTACCTTGCTATTTTATTTTTGGAGACTCTTTGGTGGATAATGGTAACAACAACCAACTCACTTCTATTGCAAAAGCTAATTACTTACCTTATGGAATTGACTTTCCTGGCGGACCAACTGGAAGGTTTTCCAACGGCAAAACCACTGTTGATGTCATTGGTGAGATTTCTTTTAATTTCGAGATTAATTTATTTATAAAAAAATATACTAAAAAAATTATTTATTTATTTAAAAAATTAAGTCAACATTGCATTCTTAATTAGCTAGGTTAAGATATCGTTTGCTACAGGTTATAAAAAAAGTGATTTTGTTATTCAATAGTTTGGGCATTAAATCAATTATAAACATGATTTTTTAGAAAAACCATTCAAAACAACTTCTCATTGTTAAAAAATATATATGTAACAAACAGATAAAATCTTTTTAAAATGATTATTTTGTTTAAATATTTTTTCAATGTAACAAAAAAAAGAAGTGATAATTTCACATTATATAAGAATATTTTGAATCTTGGATGACTTAATATAACTTTTTATTTGTACTGTACCAGATCAGTATTACTCTAGTTTATTTATCTTTCTCAACTATATATTGATATTTTGACTCTTCAATTAATATATAACTTCGTATGCATGCAAGTAATTGTCTTTATTTACTCTTGTCTAACATTTAATGGAAATTTAACAGCTGAGCAATTGGGGTTCAATGGTTACATACCTTCCTATGCATCAGCTAGAGGCCGACAAATACTGAGAGGAGTCAATTATGCTTCAGCAGCTGCTGGAATCAGAGAAGAAACAGGACAACAATTGGTACTTTTTTTTCTACTTATAATAATGTCACATATGATTATCTTTTTTCTTCATTTGGATAACCACATGCTTAACTATTTTCCATAATTTATCACTATTTTGTAGGGACAACGAATTAGTTTTAGAGGACAAGTGCAAAATTACCAAAGGACAGTGTCCCAATTGGTAAATTATTTTGGAGATGAGAACACTGCTGCAAATTATCTTAGCAAGTGCATTTATACAATTGGATTGGGTAGCAATGATTACCTTAACAACTATTTCATGCCTACAATCTATTCTACTAGTAGACAATTCACACCTCAACAATATGCTAATGTCCTTCTTCAAGCATATGCTCAGCAACTCAGGGTCAGACTCTTTTTCTATATGTATTTTTTCATCAGAGACGGTTGTAAAATGATCATTAATAACAATTTAATTTTGCAATTGGGACACTGTCCTTTGGTAATTGAAATTTTTATATATGCTAATGTCCTTAAAAGTTCAATTGTTGTGTTTGTGATTCAGATTTTATATAATTATGGGGCAAGGAAAATGGCATTATTTGGAGTTGGTCAAATAGGTTGCACCCCAAATGCATTGGCCCAAAACAGTCCAGATGGTAGAACATGTGTAGCAAGAATCAATTCTGCAAATCAATTATTCAACAATGGATTAAGATCTCTTGTTGATCAACTCAATAATCAACTTCCTGATGCAAGATTCATCTATGTAAATGTTTATGGCATCTTTCAAGACATCATAACCAGCCCATCATCCTATGGTAATTATTTTCTCCCTAAAATAGCTTAAATTCACAATTCATCAATTTTTGAAGTCAAAGTTTGGACATATATATATTTTGCTAATTTTATTTCCATGTGAGTCTTCTAATTTGAGTAATAATATATGAACAACCTAAAAAGGTTGTCGTATGCACATTGGATAAGTTATATGTAGATTTAAGTCTGACACGCATACCAGACACGAATTAGTAGAGAAAAAAAAAGAAAGAGTAGATATATGTTTTCAAGTTATCAAAATAATATTTTTGTTCTAATTTTCAGGATTTAGAGTTACAAATGCTGGATGCTGTGGTGTAGGAAGAAACAACGGTCAAATTACATGTTTGCCCTTTCAACCTGCATGTAGGGATAGGAATGGGTTCTTATTTTGGGATGCATTCCATCCAACTGAAGCTGGAAATAGTGTTATTGGTAGAAGAGCTTACAATGCTCAATCTGCTTCAGATGCATATCCTATTGATATTAATCGTTTAGCTCAAATCTGA
Protein sequence

>MS.gene004347.t1

MAFWDLSMINIGIVVLVLSLWSGIGVAQQVPCYFIFGDSLVDNGNNNQLTSIAKANYLPYGIDFPGGPTGRFSNGKTTVDVIAEQLGFNGYIPSYASARGRQILRGVNYASAAAGIREETGQQLGQRISFRGQVQNYQRTVSQLVNYFGDENTAANYLSKCIYTIGLGSNDYLNNYFMPTIYSTSRQFTPQQYANVLLQAYAQQLRILYNYGARKMALFGVGQIGCTPNALAQNSPDGRTCVARINSANQLFNNGLRSLVDQLNNQLPDARFIYVNVYGIFQDIITSPSSYGFRVTNAGCCGVGRNNGQITCLPFQPACRDRNGFLFWDAFHPTEAGNSVIGRRAYNAQSASDAYPIDINRLAQI