AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene004407

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004407.t1 MTR_2g019230 97.007 401 12 0 92 492 1 401 0.0 819
MS.gene004407.t1 MTR_3g108860 33.702 362 212 7 133 492 7 342 7.91e-64 211
MS.gene004407.t1 MTR_4g114110 33.566 286 175 8 135 416 73 347 6.82e-42 155
MS.gene004407.t1 MTR_8g085600 31.834 289 182 8 140 424 74 351 9.84e-38 144
MS.gene004407.t1 MTR_3g073640 27.536 345 178 12 143 421 43 381 1.47e-30 124
MS.gene004407.t1 MTR_8g030940 29.938 324 206 11 142 456 24 335 1.42e-29 119
MS.gene004407.t1 MTR_2g008440 28.205 351 171 13 143 421 43 384 3.77e-29 120
MS.gene004407.t1 MTR_8g080370 30.263 304 186 9 136 425 34 325 4.72e-28 115
MS.gene004407.t1 MTR_3g085570 27.682 289 195 7 140 425 32 309 1.80e-23 102
MS.gene004407.t1 MTR_3g094850 30.272 294 176 11 143 429 9 280 2.99e-22 98.6
MS.gene004407.t1 MTR_2g094093 26.377 345 230 9 141 477 18 346 7.18e-20 91.7
MS.gene004407.t1 MTR_8g085650 30.357 224 140 4 143 353 7 227 3.46e-18 86.3
MS.gene004407.t1 MTR_0345s0010 23.120 359 226 12 103 445 67 391 1.28e-16 82.4
MS.gene004407.t1 MTR_1330s0010 23.120 359 226 12 103 445 80 404 1.30e-16 82.4
MS.gene004407.t1 MTR_0105s0170 23.120 359 226 12 103 445 80 404 2.75e-16 81.6
MS.gene004407.t1 MTR_0105s0040 23.120 359 226 12 103 445 165 489 4.15e-16 81.3
MS.gene004407.t1 MTR_0105s0130 23.120 359 226 12 103 445 67 391 4.51e-16 80.9
MS.gene004407.t1 MTR_7g095220 29.954 217 135 7 143 349 4 213 4.55e-16 79.7
MS.gene004407.t1 MTR_6g023805 24.662 296 196 9 144 424 57 340 6.23e-16 80.1
MS.gene004407.t1 MTR_0105s0020 22.563 359 228 12 103 445 67 391 1.24e-15 79.3
MS.gene004407.t1 MTR_0496s0010 21.907 388 259 13 106 469 25 392 3.43e-15 77.8
MS.gene004407.t1 MTR_2g019220 67.925 53 15 1 21 73 64 114 2.21e-14 74.3
MS.gene004407.t1 MTR_4g022260 21.693 378 253 12 106 457 25 385 1.98e-13 72.4
MS.gene004407.t1 MTR_4g108280 22.191 356 241 12 135 470 23 362 9.24e-13 70.1
MS.gene004407.t1 MTR_7g070320 32.192 146 93 5 247 390 526 667 2.83e-11 66.2
MS.gene004407.t1 MTR_7g029290 23.256 301 206 9 137 424 43 331 4.76e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004407.t1 AT1G30090 68.159 402 119 2 92 492 1 394 0.0 594
MS.gene004407.t1 AT2G24540 37.398 369 214 9 126 490 11 366 5.21e-81 256
MS.gene004407.t1 AT1G55270 33.094 278 177 7 140 416 75 344 4.44e-41 153
MS.gene004407.t1 AT1G22040 30.233 344 169 13 143 421 43 380 6.77e-34 134
MS.gene004407.t1 AT1G67480 32.069 290 186 6 133 419 29 310 8.34e-33 129
MS.gene004407.t1 AT1G67480 32.069 290 186 6 133 419 29 310 8.34e-33 129
MS.gene004407.t1 AT1G67480 32.069 290 186 6 133 419 29 310 8.34e-33 129
MS.gene004407.t1 AT1G27420 26.087 322 185 9 142 463 9 277 2.68e-24 104
MS.gene004407.t1 AT1G55270 29.596 223 149 6 195 416 3 218 8.41e-22 96.3
MS.gene004407.t1 AT5G60570 27.703 296 192 8 136 423 39 320 2.95e-20 93.2
MS.gene004407.t1 AT5G60570 27.703 296 192 8 136 423 39 320 2.95e-20 93.2
MS.gene004407.t1 AT5G60570 27.703 296 192 8 136 423 39 320 2.95e-20 93.2
MS.gene004407.t1 AT3G63220 28.472 288 173 10 143 419 11 276 2.08e-19 90.1
MS.gene004407.t1 AT3G63220 28.472 288 173 10 143 419 11 276 2.08e-19 90.1
MS.gene004407.t1 AT3G63220 28.472 288 173 10 143 419 4 269 2.86e-19 89.4
MS.gene004407.t1 AT1G16250 27.530 247 162 7 140 376 5 244 2.69e-18 87.0
MS.gene004407.t1 AT1G16250 27.530 247 162 7 140 376 5 244 2.69e-18 87.0
MS.gene004407.t1 AT3G61350 22.956 318 219 11 143 452 21 320 4.93e-18 85.9
MS.gene004407.t1 AT3G61350 22.956 318 219 11 143 452 21 320 4.93e-18 85.9
MS.gene004407.t1 AT2G21950 27.303 304 194 11 143 435 20 307 1.08e-16 82.0
MS.gene004407.t1 AT4G39580 25.874 286 184 10 147 421 26 294 1.50e-14 75.5
MS.gene004407.t1 AT3G27150 24.483 290 198 7 144 424 71 348 1.93e-13 72.4
MS.gene004407.t1 AT3G27150 24.483 290 198 7 144 424 71 348 1.93e-13 72.4
MS.gene004407.t1 AT1G26930 23.602 322 212 10 143 445 71 377 1.39e-12 70.1
MS.gene004407.t1 AT1G60570 25.342 292 189 11 140 419 17 291 6.65e-12 67.4

Find 136 sgRNAs with CRISPR-Local

Find 226 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCCCTCACAACTTTCTTT+TGG 0.176864 2.4:+67223204 None:intergenic
ATCAGGTAAGCCCGGAATTA+AGG 0.209782 2.4:+67224157 None:intergenic
GGTTCAAGCGTGGTTGTTTA+TGG 0.236597 2.4:-67223426 MS.gene004407:CDS
GTTTGTTGGTATCAGTAATT+TGG 0.269841 2.4:+67225891 None:intergenic
TAATTGTCTTCTTCGTCTTC+CGG 0.313205 2.4:-67224123 MS.gene004407:CDS
TTGTCCTTGCAAGGCATTGC+AGG 0.324010 2.4:+67223906 None:intergenic
TGTCGTAGGCCGGAATCTTC+TGG 0.330235 2.4:-67223256 MS.gene004407:CDS
AAGAAAGTTGTGAGGGGAAA+TGG 0.336256 2.4:-67223200 MS.gene004407:CDS
TGACACTATCTCCCAAGTTT+AGG 0.343062 2.4:-67224247 MS.gene004407:CDS
AGCCATAGTTTCCCAGCTAT+TGG 0.348050 2.4:+67223473 None:intergenic
TGCCAACATGGGAACCAATA+TGG 0.351045 2.4:-67223598 MS.gene004407:CDS
CTTCCCAGGAATCGGCTTCC+TGG 0.361899 2.4:+67223352 None:intergenic
AGGCAAAGGGGAGCCATCTA+TGG 0.368132 2.4:+67223329 None:intergenic
CCTCTAGGAGAGACATAAAA+AGG 0.369553 2.4:+67223516 None:intergenic
AGAGCTTGAAGGGGTCAAAT+TGG 0.369698 2.4:+67223131 None:intergenic
TAGATCCGATTAGCGGGAAT+TGG 0.370137 2.4:-67223629 MS.gene004407:CDS
AACCAATAGCTGGGAAACTA+TGG 0.377206 2.4:-67223475 MS.gene004407:CDS
GAACTCATTTATCTCCTTGA+AGG 0.380491 2.4:-67226041 MS.gene004407:CDS
GCGTGCCAATTCCCGCTAAT+CGG 0.383115 2.4:+67223624 None:intergenic
AGAGAAGAACCCTTAATTCC+GGG 0.383870 2.4:-67224167 MS.gene004407:CDS
AAGAGAAGAACCCTTAATTC+CGG 0.391873 2.4:-67224168 MS.gene004407:CDS
GTTCAGAACTGCAGCATCAT+AGG 0.399835 2.4:+67223572 None:intergenic
ATAACCAGGAAGCCGATTCC+TGG 0.405175 2.4:-67223356 MS.gene004407:CDS
ATGAGATTCAATTCAGTTGA+AGG 0.417309 2.4:+67225078 None:intergenic
GTTTCCCAGCTATTGGTTCT+CGG 0.422970 2.4:+67223480 None:intergenic
GAAGAGTAACATGAGTTTGT+TGG 0.423561 2.4:+67225877 None:intergenic
AGCATCATAGGATGCCATAT+TGG 0.428156 2.4:+67223584 None:intergenic
TCAGGTAAGCCCGGAATTAA+GGG 0.433050 2.4:+67224158 None:intergenic
TGCATATTTGCTCAGGCAAA+GGG 0.438541 2.4:+67223316 None:intergenic
GCTCGAAAGAATGAAGCTTA+AGG 0.440805 2.4:-67223382 MS.gene004407:CDS
GGTGGTAGACTTTACCTTCA+AGG 0.442207 2.4:+67226027 None:intergenic
TCACAAGCATTCACAGCAAA+AGG 0.445454 2.4:+67223291 None:intergenic
CAACAGCAACCAGAAGATTC+CGG 0.446885 2.4:+67223247 None:intergenic
TTATGTCTCTCCTAGAGGAC+AGG 0.451993 2.4:-67223511 MS.gene004407:CDS
TTTGACCCCTTCAAGCTCTC+AGG 0.453320 2.4:-67223127 None:intergenic
AACCACCGCTAACCTAAACT+TGG 0.453592 2.4:+67224235 None:intergenic
AAAGGTTTGCATATTTGCTC+AGG 0.456311 2.4:+67223309 None:intergenic
CGTGGATTGTCCTCTTGACT+TGG 0.459145 2.4:-67223805 MS.gene004407:CDS
TTTGCATATCATAAGTGTAC+TGG 0.463348 2.4:-67223981 MS.gene004407:CDS
AAGGACAAGGTTTGTCCTCA+TGG 0.464137 2.4:-67223891 MS.gene004407:CDS
ATGATGCTGCAGTTCTGAAC+GGG 0.464281 2.4:-67223569 MS.gene004407:CDS
AAATGGGTTTCAAAGATCCT+TGG 0.469304 2.4:-67224013 MS.gene004407:CDS
ATCTATGGCTTCCCAGGAAT+CGG 0.471739 2.4:+67223344 None:intergenic
GATTCCTGGGAAGCCATAGA+TGG 0.472750 2.4:-67223342 MS.gene004407:CDS
CCTCTTGCAGACAGCCCTAC+AGG 0.472883 2.4:+67224085 None:intergenic
GTCAAATTTATGTCGTAGGC+CGG 0.477828 2.4:-67223266 MS.gene004407:CDS
ATCTCCCAAGTTTAGGTTAG+CGG 0.477981 2.4:-67224240 MS.gene004407:CDS
TATTGAAAGGAATGGTGAAT+GGG 0.478006 2.4:+67225992 None:intergenic
TACTGGAAAGATTCAATGGC+AGG 0.482203 2.4:-67223964 MS.gene004407:CDS
TTGTAACAGAAGGATGGTTA+TGG 0.483194 2.4:-67223539 MS.gene004407:CDS
CAATTAAGAGCAACATCATC+AGG 0.483657 2.4:+67224140 None:intergenic
CGGAATCTTCTGGTTGCTGT+TGG 0.483823 2.4:-67223246 MS.gene004407:CDS
GGAGCCATCTATGGCTTCCC+AGG 0.485903 2.4:+67223338 None:intergenic
TAGTACTGATCTTTATGAGC+TGG 0.486572 2.4:-67223667 MS.gene004407:CDS
TTCATCGGAAGAAAGATGAT+TGG 0.488823 2.4:+67225919 None:intergenic
AGTAATTTGGCAAGCTTCAT+CGG 0.489235 2.4:+67225904 None:intergenic
ACGATCCGAGAACCAATAGC+TGG 0.496530 2.4:-67223485 MS.gene004407:CDS
TCATCGGAAGAAAGATGATT+GGG 0.498963 2.4:+67225920 None:intergenic
TTTACTAATAGGAAGCAAAT+GGG 0.500450 2.4:-67224029 MS.gene004407:CDS
AATAGCACCTGAGAGCTTGA+AGG 0.504117 2.4:+67223120 None:intergenic
TTGCATATTTGCTCAGGCAA+AGG 0.504929 2.4:+67223315 None:intergenic
CTTGCAAGGCATTGCAGGGA+TGG 0.507543 2.4:+67223911 None:intergenic
AGCTGGGAAACTATGGCTGT+TGG 0.507613 2.4:-67223468 MS.gene004407:CDS
GATGGGATGGTTTATGCAGC+TGG 0.507844 2.4:-67223696 MS.gene004407:CDS
CAGGATGAATGACTTTGAAC+CGG 0.508558 2.4:+67224104 None:intergenic
TGCCATATTGGTTCCCATGT+TGG 0.508940 2.4:+67223596 None:intergenic
GTATTGAAAGGAATGGTGAA+TGG 0.509396 2.4:+67225991 None:intergenic
TGCAATGCCTTGCAAGGACA+AGG 0.510866 2.4:-67223904 MS.gene004407:CDS
ATGGGATGGTTTATGCAGCT+GGG 0.512009 2.4:-67223695 MS.gene004407:CDS
AGGTATTAGATCCGATTAGC+GGG 0.521082 2.4:-67223635 MS.gene004407:CDS
TTGGGAGATAGTGTCATTTG+AGG 0.521340 2.4:+67224254 None:intergenic
AATGGAACTTCAGTGTTCAA+TGG 0.527552 2.4:-67223182 MS.gene004407:CDS
AGTGTACTGGAAAGATTCAA+TGG 0.529957 2.4:-67223968 MS.gene004407:CDS
ATAGCACCTGAGAGCTTGAA+GGG 0.534517 2.4:+67223121 None:intergenic
GCTCAGAAACAACAAATAAG+TGG 0.537113 2.4:+67223403 None:intergenic
TAACCAGGAAGCCGATTCCT+GGG 0.538113 2.4:-67223355 MS.gene004407:CDS
CTTAGAGAATGATCTAACTC+TGG 0.539641 2.4:+67224188 None:intergenic
TTTGCCAGTGGAGTAATCGA+TGG 0.542803 2.4:-67223714 MS.gene004407:CDS
CAAGCACCGGTTCACAAGCT+AGG 0.543317 2.4:-67224281 MS.gene004407:CDS
TTGCCAGTGGAGTAATCGAT+GGG 0.543911 2.4:-67223713 MS.gene004407:CDS
AAGAGGTGGCATATGTTACT+TGG 0.546808 2.4:-67224068 MS.gene004407:CDS
GGACTTAGAGAAGGGTGGAC+TGG 0.550423 2.4:-67223447 MS.gene004407:CDS
GGATCACCTAGCTTGTGAAC+CGG 0.553072 2.4:+67224275 None:intergenic
TTGGCACGCTATTGCCAACA+TGG 0.553982 2.4:-67223610 MS.gene004407:CDS
GCAACATCATCAGGTAAGCC+CGG 0.556029 2.4:+67224149 None:intergenic
TCAAAGTCATTCATCCTGTA+GGG 0.557607 2.4:-67224099 MS.gene004407:CDS
GGATCGTAGACCTGTCCTCT+AGG 0.560032 2.4:+67223501 None:intergenic
CATCCCTGCAATGCCTTGCA+AGG 0.560526 2.4:-67223910 MS.gene004407:CDS
GATTGTCAAATTTATGTCGT+AGG 0.561359 2.4:-67223270 MS.gene004407:CDS
GAATGATCTAACTCTGGCAT+CGG 0.561877 2.4:+67224194 None:intergenic
GTAACGAACATTGTATTGAA+AGG 0.563382 2.4:+67225979 None:intergenic
CATCCCATCGATTACTCCAC+TGG 0.564791 2.4:+67223710 None:intergenic
TGTCCTTGCAAGGCATTGCA+GGG 0.566024 2.4:+67223907 None:intergenic
TCTTTACGTATGCGGTGGCA+TGG 0.567533 2.4:-67223835 MS.gene004407:CDS
AACCCAAAAGAAAGTTGTGA+GGG 0.567884 2.4:-67223207 MS.gene004407:CDS
TTCAAAGTCATTCATCCTGT+AGG 0.569327 2.4:-67224100 MS.gene004407:CDS
TATGATGCTGCAGTTCTGAA+CGG 0.569619 2.4:-67223570 MS.gene004407:CDS
CTTACAAGAAGCAAATAAAG+TGG 0.570941 2.4:+67225039 None:intergenic
GTAGGGCTGTCTGCAAGAGG+TGG 0.571680 2.4:-67224082 MS.gene004407:CDS
ATGGCTGTTGGACTTAGAGA+AGG 0.574595 2.4:-67223456 MS.gene004407:CDS
CCTGTAGGGCTGTCTGCAAG+AGG 0.578172 2.4:-67224085 MS.gene004407:CDS
CAGTGGAGTAATCGATGGGA+TGG 0.581579 2.4:-67223709 MS.gene004407:CDS
TGTTACTTGGTAGTAAAGAG+AGG 0.594306 2.4:-67224055 MS.gene004407:CDS
GGACAAACCTTGTCCTTGCA+AGG 0.597418 2.4:+67223897 None:intergenic
TGGGATGGTTTATGCAGCTG+GGG 0.601401 2.4:-67223694 MS.gene004407:CDS
GAAGCTTAAGGTTTATAACC+AGG 0.604476 2.4:-67223370 MS.gene004407:CDS
TCCCAAGTTTAGGTTAGCGG+TGG 0.605858 2.4:-67224237 MS.gene004407:CDS
TTATGAGCTGGATTCAGCTG+AGG 0.606127 2.4:-67223655 MS.gene004407:CDS
TATTTCAACACCAAGTCAAG+AGG 0.607388 2.4:+67223795 None:intergenic
TTGAAAGGAATGGTGAATGG+GGG 0.607448 2.4:+67225994 None:intergenic
CGGTGGCATGGTCTCTGACG+TGG 0.609464 2.4:-67223823 MS.gene004407:CDS
GAACATTGTATTGAAAGGAA+TGG 0.617348 2.4:+67225984 None:intergenic
GAGGTATTAGATCCGATTAG+CGG 0.618113 2.4:-67223636 MS.gene004407:CDS
GGGAAACTGCTTGTAACAGA+AGG 0.619168 2.4:-67223549 MS.gene004407:CDS
CGATCCGAGAACCAATAGCT+GGG 0.621734 2.4:-67223484 MS.gene004407:CDS
TGGCTGTTGGACTTAGAGAA+GGG 0.623432 2.4:-67223455 MS.gene004407:CDS
AACTGCTTGTAACAGAAGGA+TGG 0.627353 2.4:-67223545 MS.gene004407:CDS
TGGCACGCTATTGCCAACAT+GGG 0.627378 2.4:-67223609 MS.gene004407:CDS
ATTGAAAGGAATGGTGAATG+GGG 0.634124 2.4:+67225993 None:intergenic
TGAATCGAATGATCAGTGCT+AGG 0.644133 2.4:-67223743 MS.gene004407:CDS
CTGTTGGACTTAGAGAAGGG+TGG 0.655252 2.4:-67223452 MS.gene004407:CDS
GGTAATCTTTACGTATGCGG+TGG 0.656082 2.4:-67223840 MS.gene004407:CDS
TGTGTTTCGATGCCTCACGA+TGG 0.656289 2.4:-67223861 MS.gene004407:CDS
ACCACCGCTAACCTAAACTT+GGG 0.656767 2.4:+67224236 None:intergenic
GCATATTTGCTCAGGCAAAG+GGG 0.660049 2.4:+67223317 None:intergenic
ACGTAAAGATTACCATCGTG+AGG 0.668276 2.4:+67223849 None:intergenic
AGGGTGGACTGGTTCAAGCG+TGG 0.672213 2.4:-67223436 MS.gene004407:CDS
GGGATGGTTTATGCAGCTGG+GGG 0.673599 2.4:-67223693 MS.gene004407:CDS
GAACCCAAAAGAAAGTTGTG+AGG 0.676488 2.4:-67223208 MS.gene004407:CDS
ACTGATCATTCGATTCATCA+CGG 0.677591 2.4:+67223749 None:intergenic
GGATGGTTTATGCAGCTGGG+GGG 0.678556 2.4:-67223692 MS.gene004407:CDS
ACCCAAAAGAAAGTTGTGAG+GGG 0.696628 2.4:-67223206 MS.gene004407:CDS
AGATGATTGGGAGATGCATG+AGG 0.703181 2.4:+67225932 None:intergenic
TAGCACCTGAGAGCTTGAAG+GGG 0.706757 2.4:+67223122 None:intergenic
GATGGTAATCTTTACGTATG+CGG 0.716864 2.4:-67223843 MS.gene004407:CDS
GAAACACACCGAAAACCATG+AGG 0.732405 2.4:+67223876 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAACTAGAAAAAAATAT+AGG - chr2.4:67223796-67223815 MS.gene004407:CDS 10.0%
!!! ATTTTTTTATAGCAAATTAA+AGG + chr2.4:67224642-67224661 None:intergenic 10.0%
!!! TTTTATTGTTTCTTATTAAA+GGG - chr2.4:67224811-67224830 MS.gene004407:intron 10.0%
!! AATAAAAATCTCAACTTTAT+AGG + chr2.4:67224321-67224340 None:intergenic 15.0%
!! TTTACATCATAAAAAATGAA+AGG - chr2.4:67223837-67223856 MS.gene004407:CDS 15.0%
!!! AAAAACATGAAGAATATTTT+AGG + chr2.4:67223605-67223624 None:intergenic 15.0%
!!! AAAACATGAAGAATATTTTA+GGG + chr2.4:67223604-67223623 None:intergenic 15.0%
!!! ATGATTAATTTTTTGCTAAT+AGG + chr2.4:67223979-67223998 None:intergenic 15.0%
!!! ATTTTTTATGATGTAAACAA+AGG + chr2.4:67223834-67223853 None:intergenic 15.0%
!!! GTTTTATTGTTTCTTATTAA+AGG - chr2.4:67224810-67224829 MS.gene004407:intron 15.0%
!!! TAAAATATTCTTCATGTTTT+TGG - chr2.4:67223604-67223623 MS.gene004407:CDS 15.0%
!! AATAACACTAGAAAAAAGAA+GGG - chr2.4:67223528-67223547 MS.gene004407:CDS 20.0%
!! AATCAAATGTTGGTATATTT+AGG - chr2.4:67223759-67223778 MS.gene004407:CDS 20.0%
!! ATCAAATGTTGGTATATTTA+GGG - chr2.4:67223760-67223779 MS.gene004407:CDS 20.0%
!! ATCAGTTGAATATCTAATAA+GGG - chr2.4:67224519-67224538 MS.gene004407:intron 20.0%
!! TGTGATTCATAATTTATGAA+TGG + chr2.4:67223368-67223387 None:intergenic 20.0%
!! TTAACACATACATAAATTCT+GGG - chr2.4:67224241-67224260 MS.gene004407:CDS 20.0%
!!! AAAAAAATATAGGAGTATGA+GGG - chr2.4:67223806-67223825 MS.gene004407:CDS 20.0%
!!! AAAAACCTGAAGAAAATTTT+AGG - chr2.4:67223728-67223747 MS.gene004407:CDS 20.0%
!!! AAAACCTGAAGAAAATTTTA+GGG - chr2.4:67223729-67223748 MS.gene004407:CDS 20.0%
!!! AAACATGAAGAATATTTTAG+GGG + chr2.4:67223603-67223622 None:intergenic 20.0%
!!! TAAAATTTTCTTCAGGTTTT+TGG + chr2.4:67223729-67223748 None:intergenic 20.0%
!!! TGTTTTATTCTATCTTCTTT+TGG - chr2.4:67224555-67224574 MS.gene004407:intron 20.0%
!!! TTTTATTTGATATTGCTTCT+GGG - chr2.4:67224334-67224353 MS.gene004407:intron 20.0%
!!! TTTTTATTTGATATTGCTTC+TGG - chr2.4:67224333-67224352 MS.gene004407:intron 20.0%
! ATATTCACAACCTTAAATCA+AGG - chr2.4:67223463-67223482 MS.gene004407:CDS 25.0%
! CAATAACACTAGAAAAAAGA+AGG - chr2.4:67223527-67223546 MS.gene004407:CDS 25.0%
! CATAGATGGAAAACTTTAAA+GGG + chr2.4:67223631-67223650 None:intergenic 25.0%
! GAAAAGGAAAATGCAAATAA+AGG + chr2.4:67223866-67223885 None:intergenic 25.0%
! GAGATTTAACGATAAAGATA+AGG - chr2.4:67224849-67224868 MS.gene004407:intron 25.0%
! GATCAGTTGAATATCTAATA+AGG - chr2.4:67224518-67224537 MS.gene004407:intron 25.0%
! GCATATAATAATATCTCTAC+TGG + chr2.4:67223498-67223517 None:intergenic 25.0%
! GTTAACACATACATAAATTC+TGG - chr2.4:67224240-67224259 MS.gene004407:CDS 25.0%
! TATCTCTTGGATTGAAAATT+TGG - chr2.4:67224700-67224719 MS.gene004407:intron 25.0%
! TCAAATGTTGGTATATTTAG+GGG - chr2.4:67223761-67223780 MS.gene004407:CDS 25.0%
! TCAGTTGAATATCTAATAAG+GGG - chr2.4:67224520-67224539 MS.gene004407:intron 25.0%
! TCATAGATGGAAAACTTTAA+AGG + chr2.4:67223632-67223651 None:intergenic 25.0%
! TGTTTCTTATTAAAGGGTTT+AGG - chr2.4:67224817-67224836 MS.gene004407:intron 25.0%
! TTTACTAATAGGAAGCAAAT+GGG - chr2.4:67225151-67225170 MS.gene004407:intron 25.0%
! TTTATAGGAAAATAACAGTG+AGG + chr2.4:67224306-67224325 None:intergenic 25.0%
! TTTATTTGATATTGCTTCTG+GGG - chr2.4:67224335-67224354 MS.gene004407:intron 25.0%
!! AAACCTGAAGAAAATTTTAG+GGG - chr2.4:67223730-67223749 MS.gene004407:CDS 25.0%
!! GAAAAAAATATAGGAGTATG+AGG - chr2.4:67223805-67223824 MS.gene004407:CDS 25.0%
!! GTCAAATTGGATAAACTTTT+AGG + chr2.4:67226039-67226058 None:intergenic 25.0%
!! TCTAGTGTTATTGTCATTTA+TGG + chr2.4:67223520-67223539 None:intergenic 25.0%
!! TTTTACTAATAGGAAGCAAA+TGG - chr2.4:67225150-67225169 MS.gene004407:intron 25.0%
!! TTTTCTCTTTATTGTGGATT+AGG - chr2.4:67224605-67224624 MS.gene004407:intron 25.0%
!!! AACATGAAGAATATTTTAGG+GGG + chr2.4:67223602-67223621 None:intergenic 25.0%
!!! AAGAGAGGTTTTTTACTAAT+AGG - chr2.4:67225140-67225159 MS.gene004407:intron 25.0%
!!! GTGCAAAATTATAGCTTTTT+TGG - chr2.4:67224400-67224419 MS.gene004407:intron 25.0%
ACAAAGAAAGAGATAAAGAC+TGG + chr2.4:67224057-67224076 None:intergenic 30.0%
AGGAAGATTTGATTATTGTG+TGG + chr2.4:67223959-67223978 None:intergenic 30.0%
ATGAGATTCAATTCAGTTGA+AGG + chr2.4:67224105-67224124 None:intergenic 30.0%
ATTATGTCATGAGAGTTTGT+CGG + chr2.4:67223431-67223450 None:intergenic 30.0%
CAAAAACACACAAAGAAACA+AGG + chr2.4:67224197-67224216 None:intergenic 30.0%
CTTACAAGAAGCAAATAAAG+TGG + chr2.4:67224144-67224163 None:intergenic 30.0%
GAACATTGTATTGAAAGGAA+TGG + chr2.4:67223199-67223218 None:intergenic 30.0%
GATTGTCAAATTTATGTCGT+AGG - chr2.4:67225910-67225929 MS.gene004407:CDS 30.0%
GCATAGACTAATTTCATAGA+TGG + chr2.4:67223645-67223664 None:intergenic 30.0%
GTAACGAACATTGTATTGAA+AGG + chr2.4:67223204-67223223 None:intergenic 30.0%
TATGCAAATACAAAAAGCCA+AGG + chr2.4:67225187-67225206 None:intergenic 30.0%
TATTGAAAGGAATGGTGAAT+GGG + chr2.4:67223191-67223210 None:intergenic 30.0%
TGGAATAGATTCTTATCTCT+TGG - chr2.4:67224687-67224706 MS.gene004407:intron 30.0%
TTTGCATATCATAAGTGTAC+TGG - chr2.4:67225199-67225218 MS.gene004407:intron 30.0%
TTTGTTTGTGAGGAGAAAAA+TGG + chr2.4:67224020-67224039 None:intergenic 30.0%
! AACCTGAAGAAAATTTTAGG+GGG - chr2.4:67223731-67223750 MS.gene004407:CDS 30.0%
! GTTTGTTGGTATCAGTAATT+TGG + chr2.4:67223292-67223311 None:intergenic 30.0%
! TATCTTCTTTTGGATCATTG+TGG - chr2.4:67224565-67224584 MS.gene004407:intron 30.0%
! TGAATTGGGTTATTTGCTTT+TGG - chr2.4:67224378-67224397 MS.gene004407:intron 30.0%
!! CTTTATTGTGGATTAGGATT+TGG - chr2.4:67224611-67224630 MS.gene004407:intron 30.0%
!! TTGATCTAACTCACTTTTCT+TGG - chr2.4:67225242-67225261 MS.gene004407:intron 30.0%
!! TTTTTGGAGACATGTGAATT+GGG - chr2.4:67224364-67224383 MS.gene004407:intron 30.0%
!!! GTGCTTTTTTCTCTTTATTG+TGG - chr2.4:67224599-67224618 MS.gene004407:intron 30.0%
!!! TTTTTTGGAGACATGTGAAT+TGG - chr2.4:67224363-67224382 MS.gene004407:intron 30.0%
AAAGGTTTGCATATTTGCTC+AGG + chr2.4:67225874-67225893 None:intergenic 35.0%
AAATGTGAGTGTATCAGCTT+AGG - chr2.4:67224658-67224677 MS.gene004407:intron 35.0%
AACCCAAAAGAAAGTTGTGA+GGG - chr2.4:67225973-67225992 MS.gene004407:CDS 35.0%
AAGAGAAGAACCCTTAATTC+CGG - chr2.4:67225012-67225031 MS.gene004407:intron 35.0%
AAGCTAGTAGAGCAGATATA+AGG + chr2.4:67223928-67223947 None:intergenic 35.0%
AATGGAACTTCAGTGTTCAA+TGG - chr2.4:67225998-67226017 MS.gene004407:CDS 35.0%
ACTGATCATTCGATTCATCA+CGG + chr2.4:67225434-67225453 None:intergenic 35.0%
AGAAACAAGGTAAAGTGAAG+AGG + chr2.4:67224184-67224203 None:intergenic 35.0%
AGTAATTTGGCAAGCTTCAT+CGG + chr2.4:67223279-67223298 None:intergenic 35.0%
AGTGTACTGGAAAGATTCAA+TGG - chr2.4:67225212-67225231 MS.gene004407:intron 35.0%
ATGAGATCACGAAAAATCGT+TGG - chr2.4:67225407-67225426 MS.gene004407:intron 35.0%
ATTGAAAGGAATGGTGAATG+GGG + chr2.4:67223190-67223209 None:intergenic 35.0%
CAACCAATTTGAGAACATAG+TGG - chr2.4:67224750-67224769 MS.gene004407:intron 35.0%
CAATTAAGAGCAACATCATC+AGG + chr2.4:67225043-67225062 None:intergenic 35.0%
CACTATGTTCTCAAATTGGT+TGG + chr2.4:67224752-67224771 None:intergenic 35.0%
CTTAGAGAATGATCTAACTC+TGG + chr2.4:67224995-67225014 None:intergenic 35.0%
CTTCCACTATGTTCTCAAAT+TGG + chr2.4:67224756-67224775 None:intergenic 35.0%
GAACTCATTTATCTCCTTGA+AGG - chr2.4:67223139-67223158 MS.gene004407:CDS 35.0%
GAAGAGTAACATGAGTTTGT+TGG + chr2.4:67223306-67223325 None:intergenic 35.0%
GAAGCTTAAGGTTTATAACC+AGG - chr2.4:67225810-67225829 MS.gene004407:intron 35.0%
GATGGTAATCTTTACGTATG+CGG - chr2.4:67225337-67225356 MS.gene004407:intron 35.0%
GCTCAGAAACAACAAATAAG+TGG + chr2.4:67225780-67225799 None:intergenic 35.0%
GTATTGAAAGGAATGGTGAA+TGG + chr2.4:67223192-67223211 None:intergenic 35.0%
TAATTGTCTTCTTCGTCTTC+CGG - chr2.4:67225057-67225076 MS.gene004407:CDS 35.0%
TATTTCAACACCAAGTCAAG+AGG + chr2.4:67225388-67225407 None:intergenic 35.0%
TCAAAGTCATTCATCCTGTA+GGG - chr2.4:67225081-67225100 MS.gene004407:CDS 35.0%
TCATCGGAAGAAAGATGATT+GGG + chr2.4:67223263-67223282 None:intergenic 35.0%
TGTATCAGCTTAGGAGAATT+TGG - chr2.4:67224667-67224686 MS.gene004407:intron 35.0%
TTCAAAGTCATTCATCCTGT+AGG - chr2.4:67225080-67225099 MS.gene004407:CDS 35.0%
TTCATCGGAAGAAAGATGAT+TGG + chr2.4:67223264-67223283 None:intergenic 35.0%
TTGTAACAGAAGGATGGTTA+TGG - chr2.4:67225641-67225660 MS.gene004407:intron 35.0%
! AAATGGGTTTCAAAGATCCT+TGG - chr2.4:67225167-67225186 MS.gene004407:intron 35.0%
! GTTACTAGTTTCACACGAAA+AGG + chr2.4:67223882-67223901 None:intergenic 35.0%
! TGTTACTTGGTAGTAAAGAG+AGG - chr2.4:67225125-67225144 MS.gene004407:intron 35.0%
!! TAGTACTGATCTTTATGAGC+TGG - chr2.4:67225513-67225532 MS.gene004407:intron 35.0%
!!! ACTTTCTTTTGGGTTCAGTA+TGG + chr2.4:67225968-67225987 None:intergenic 35.0%
!!! TGAAGACTGTTTTGTTTGTG+AGG + chr2.4:67224030-67224049 None:intergenic 35.0%
AACCAATAGCTGGGAAACTA+TGG - chr2.4:67225705-67225724 MS.gene004407:intron 40.0%
AACTGCTTGTAACAGAAGGA+TGG - chr2.4:67225635-67225654 MS.gene004407:intron 40.0%
AAGAAAGTTGTGAGGGGAAA+TGG - chr2.4:67225980-67225999 MS.gene004407:CDS 40.0%
AAGAGGTGGCATATGTTACT+TGG - chr2.4:67225112-67225131 MS.gene004407:intron 40.0%
ACCCAAAAGAAAGTTGTGAG+GGG - chr2.4:67225974-67225993 MS.gene004407:CDS 40.0%
ACGTAAAGATTACCATCGTG+AGG + chr2.4:67225334-67225353 None:intergenic 40.0%
AGAGAAGAACCCTTAATTCC+GGG - chr2.4:67225013-67225032 MS.gene004407:intron 40.0%
AGCATCATAGGATGCCATAT+TGG + chr2.4:67225599-67225618 None:intergenic 40.0%
AGGTATTAGATCCGATTAGC+GGG - chr2.4:67225545-67225564 MS.gene004407:intron 40.0%
CAGGATGAATGACTTTGAAC+CGG + chr2.4:67225079-67225098 None:intergenic 40.0%
GAACCCAAAAGAAAGTTGTG+AGG - chr2.4:67225972-67225991 MS.gene004407:CDS 40.0%
GAATGATCTAACTCTGGCAT+CGG + chr2.4:67224989-67225008 None:intergenic 40.0%
GCTCGAAAGAATGAAGCTTA+AGG - chr2.4:67225798-67225817 MS.gene004407:intron 40.0%
GGGGGACTAAAATCAAATGT+TGG - chr2.4:67223749-67223768 MS.gene004407:CDS 40.0%
GTCAAATTTATGTCGTAGGC+CGG - chr2.4:67225914-67225933 MS.gene004407:CDS 40.0%
TACTGGAAAGATTCAATGGC+AGG - chr2.4:67225216-67225235 MS.gene004407:intron 40.0%
TCACAAGCATTCACAGCAAA+AGG + chr2.4:67225892-67225911 None:intergenic 40.0%
TGAATCGAATGATCAGTGCT+AGG - chr2.4:67225437-67225456 MS.gene004407:intron 40.0%
TGACACTATCTCCCAAGTTT+AGG - chr2.4:67224933-67224952 MS.gene004407:intron 40.0%
TGCATATTTGCTCAGGCAAA+GGG + chr2.4:67225867-67225886 None:intergenic 40.0%
TTGAAAGGAATGGTGAATGG+GGG + chr2.4:67223189-67223208 None:intergenic 40.0%
TTGCATATTTGCTCAGGCAA+AGG + chr2.4:67225868-67225887 None:intergenic 40.0%
! AGGTTTGTCCTCATGGTTTT+CGG - chr2.4:67225296-67225315 MS.gene004407:intron 40.0%
! ATCTCCCAAGTTTAGGTTAG+CGG - chr2.4:67224940-67224959 MS.gene004407:intron 40.0%
! ATTTTCGTCTCAACAAGCAC+CGG - chr2.4:67224886-67224905 MS.gene004407:intron 40.0%
! CCTCTAGGAGAGACATAAAA+AGG + chr2.4:67225667-67225686 None:intergenic 40.0%
! CCTTTTTATGTCTCTCCTAG+AGG - chr2.4:67225664-67225683 MS.gene004407:intron 40.0%
! CTTCTTTTGGATCATTGTGG+AGG - chr2.4:67224568-67224587 MS.gene004407:intron 40.0%
! GAGGTATTAGATCCGATTAG+CGG - chr2.4:67225544-67225563 MS.gene004407:intron 40.0%
! GTCCCCCTAAAATTTTCTTC+AGG + chr2.4:67223736-67223755 None:intergenic 40.0%
! TCCCCTCACAACTTTCTTTT+GGG + chr2.4:67225978-67225997 None:intergenic 40.0%
! TTCCCCTCACAACTTTCTTT+TGG + chr2.4:67225979-67225998 None:intergenic 40.0%
!! CTAGCTTTTTACGAAGTAGC+AGG - chr2.4:67224452-67224471 MS.gene004407:intron 40.0%
!! TATGATGCTGCAGTTCTGAA+CGG - chr2.4:67225610-67225629 MS.gene004407:intron 40.0%
!! TTGGGAGATAGTGTCATTTG+AGG + chr2.4:67224929-67224948 None:intergenic 40.0%
AACCACCGCTAACCTAAACT+TGG + chr2.4:67224948-67224967 None:intergenic 45.0%
AAGGACAAGGTTTGTCCTCA+TGG - chr2.4:67225289-67225308 MS.gene004407:intron 45.0%
ACCACCGCTAACCTAAACTT+GGG + chr2.4:67224947-67224966 None:intergenic 45.0%
AGAGCTTGAAGGGGTCAAAT+TGG + chr2.4:67226052-67226071 None:intergenic 45.0%
AGATGATTGGGAGATGCATG+AGG + chr2.4:67223251-67223270 None:intergenic 45.0%
AGCCATAGTTTCCCAGCTAT+TGG + chr2.4:67225710-67225729 None:intergenic 45.0%
ATCAGGTAAGCCCGGAATTA+AGG + chr2.4:67225026-67225045 None:intergenic 45.0%
ATCTATGGCTTCCCAGGAAT+CGG + chr2.4:67225839-67225858 None:intergenic 45.0%
ATGGCTGTTGGACTTAGAGA+AGG - chr2.4:67225724-67225743 MS.gene004407:intron 45.0%
ATGGGATGGTTTATGCAGCT+GGG - chr2.4:67225485-67225504 MS.gene004407:intron 45.0%
CAACAGCAACCAGAAGATTC+CGG + chr2.4:67225936-67225955 None:intergenic 45.0%
CTAGTAACTCAAAATGCGCG+TGG - chr2.4:67223894-67223913 MS.gene004407:CDS 45.0%
GAAACACACCGAAAACCATG+AGG + chr2.4:67225307-67225326 None:intergenic 45.0%
GATCATTGTGGAGGAGGAAT+TGG - chr2.4:67224577-67224596 MS.gene004407:intron 45.0%
GCATATTTGCTCAGGCAAAG+GGG + chr2.4:67225866-67225885 None:intergenic 45.0%
GCATCACGCTCCTTGATTTA+AGG + chr2.4:67223476-67223495 None:intergenic 45.0%
GGGAAACTGCTTGTAACAGA+AGG - chr2.4:67225631-67225650 MS.gene004407:intron 45.0%
GGTAATCTTTACGTATGCGG+TGG - chr2.4:67225340-67225359 MS.gene004407:intron 45.0%
GGTGGTAGACTTTACCTTCA+AGG + chr2.4:67223156-67223175 None:intergenic 45.0%
GGTTCAAGCGTGGTTGTTTA+TGG - chr2.4:67225754-67225773 MS.gene004407:intron 45.0%
GTTCAGAACTGCAGCATCAT+AGG + chr2.4:67225611-67225630 None:intergenic 45.0%
TAGATCCGATTAGCGGGAAT+TGG - chr2.4:67225551-67225570 MS.gene004407:intron 45.0%
TCAGGTAAGCCCGGAATTAA+GGG + chr2.4:67225025-67225044 None:intergenic 45.0%
TGCCAACATGGGAACCAATA+TGG - chr2.4:67225582-67225601 MS.gene004407:intron 45.0%
TGGCTGTTGGACTTAGAGAA+GGG - chr2.4:67225725-67225744 MS.gene004407:intron 45.0%
TTATGAGCTGGATTCAGCTG+AGG - chr2.4:67225525-67225544 MS.gene004407:intron 45.0%
TTATGTCTCTCCTAGAGGAC+AGG - chr2.4:67225669-67225688 MS.gene004407:intron 45.0%
TTGCCAGTGGAGTAATCGAT+GGG - chr2.4:67225467-67225486 MS.gene004407:intron 45.0%
TTTGCCAGTGGAGTAATCGA+TGG - chr2.4:67225466-67225485 MS.gene004407:intron 45.0%
! CTTTTGGATCATTGTGGAGG+AGG - chr2.4:67224571-67224590 MS.gene004407:intron 45.0%
!! ATGATGCTGCAGTTCTGAAC+GGG - chr2.4:67225611-67225630 MS.gene004407:intron 45.0%
!! GTTTCCCAGCTATTGGTTCT+CGG + chr2.4:67225703-67225722 None:intergenic 45.0%
!! TGCCATATTGGTTCCCATGT+TGG + chr2.4:67225587-67225606 None:intergenic 45.0%
!!! GCTAGGTCATTTTTTGCCAG+TGG - chr2.4:67225454-67225473 MS.gene004407:intron 45.0%
!!! GCTTCTGGGGTGTTGTTTTT+TGG - chr2.4:67224348-67224367 MS.gene004407:intron 45.0%
AAAGGAATGGTGAATGGGGG+CGG + chr2.4:67223186-67223205 None:intergenic 50.0%
ACGATCCGAGAACCAATAGC+TGG - chr2.4:67225695-67225714 MS.gene004407:intron 50.0%
AGCTGGGAAACTATGGCTGT+TGG - chr2.4:67225712-67225731 MS.gene004407:intron 50.0%
CAGTGGAGTAATCGATGGGA+TGG - chr2.4:67225471-67225490 MS.gene004407:intron 50.0%
CGATCCGAGAACCAATAGCT+GGG - chr2.4:67225696-67225715 MS.gene004407:intron 50.0%
CTGTTGGACTTAGAGAAGGG+TGG - chr2.4:67225728-67225747 MS.gene004407:intron 50.0%
GATGGGATGGTTTATGCAGC+TGG - chr2.4:67225484-67225503 MS.gene004407:intron 50.0%
GATTCCTGGGAAGCCATAGA+TGG - chr2.4:67225838-67225857 MS.gene004407:intron 50.0%
GCAACATCATCAGGTAAGCC+CGG + chr2.4:67225034-67225053 None:intergenic 50.0%
GGACAAACCTTGTCCTTGCA+AGG + chr2.4:67225286-67225305 None:intergenic 50.0%
TCTTTACGTATGCGGTGGCA+TGG - chr2.4:67225345-67225364 MS.gene004407:intron 50.0%
TGCAATGCCTTGCAAGGACA+AGG - chr2.4:67225276-67225295 MS.gene004407:intron 50.0%
TGGCACGCTATTGCCAACAT+GGG - chr2.4:67225571-67225590 MS.gene004407:intron 50.0%
TGGGATGGTTTATGCAGCTG+GGG - chr2.4:67225486-67225505 MS.gene004407:intron 50.0%
TGTGTTTCGATGCCTCACGA+TGG - chr2.4:67225319-67225338 MS.gene004407:intron 50.0%
TTGGCACGCTATTGCCAACA+TGG - chr2.4:67225570-67225589 MS.gene004407:intron 50.0%
! ATAACCAGGAAGCCGATTCC+TGG - chr2.4:67225824-67225843 MS.gene004407:intron 50.0%
! CATCCCATCGATTACTCCAC+TGG + chr2.4:67225473-67225492 None:intergenic 50.0%
! CGGAATCTTCTGGTTGCTGT+TGG - chr2.4:67225934-67225953 MS.gene004407:CDS 50.0%
! CGTGGATTGTCCTCTTGACT+TGG - chr2.4:67225375-67225394 MS.gene004407:intron 50.0%
! GGATCACCTAGCTTGTGAAC+CGG + chr2.4:67224908-67224927 None:intergenic 50.0%
! TAACCAGGAAGCCGATTCCT+GGG - chr2.4:67225825-67225844 MS.gene004407:intron 50.0%
! TCCCAAGTTTAGGTTAGCGG+TGG - chr2.4:67224943-67224962 MS.gene004407:intron 50.0%
!! TGTCCTTGCAAGGCATTGCA+GGG + chr2.4:67225276-67225295 None:intergenic 50.0%
!! TTGTCCTTGCAAGGCATTGC+AGG + chr2.4:67225277-67225296 None:intergenic 50.0%
AGGCAAAGGGGAGCCATCTA+TGG + chr2.4:67225854-67225873 None:intergenic 55.0%
CATCCCTGCAATGCCTTGCA+AGG - chr2.4:67225270-67225289 MS.gene004407:intron 55.0%
GCGTGCCAATTCCCGCTAAT+CGG + chr2.4:67225559-67225578 None:intergenic 55.0%
GGACTTAGAGAAGGGTGGAC+TGG - chr2.4:67225733-67225752 MS.gene004407:intron 55.0%
GGATCGTAGACCTGTCCTCT+AGG + chr2.4:67225682-67225701 None:intergenic 55.0%
GGATGGTTTATGCAGCTGGG+GGG - chr2.4:67225488-67225507 MS.gene004407:intron 55.0%
GGGATGGTTTATGCAGCTGG+GGG - chr2.4:67225487-67225506 MS.gene004407:intron 55.0%
TGTCGTAGGCCGGAATCTTC+TGG - chr2.4:67225924-67225943 MS.gene004407:CDS 55.0%
!! CAAGCACCGGTTCACAAGCT+AGG - chr2.4:67224899-67224918 MS.gene004407:intron 55.0%
!! CTTGCAAGGCATTGCAGGGA+TGG + chr2.4:67225272-67225291 None:intergenic 55.0%
CCTCTTGCAGACAGCCCTAC+AGG + chr2.4:67225098-67225117 None:intergenic 60.0%
CCTGTAGGGCTGTCTGCAAG+AGG - chr2.4:67225095-67225114 MS.gene004407:intron 60.0%
GGAGCCATCTATGGCTTCCC+AGG + chr2.4:67225845-67225864 None:intergenic 60.0%
GTAGGGCTGTCTGCAAGAGG+TGG - chr2.4:67225098-67225117 MS.gene004407:intron 60.0%
! CTTCCCAGGAATCGGCTTCC+TGG + chr2.4:67225831-67225850 None:intergenic 60.0%
!! AGGGTGGACTGGTTCAAGCG+TGG - chr2.4:67225744-67225763 MS.gene004407:intron 60.0%
CGGTGGCATGGTCTCTGACG+TGG - chr2.4:67225357-67225376 MS.gene004407:intron 65.0%
GGAATGGTGAATGGGGGCGG+CGG + chr2.4:67223183-67223202 None:intergenic 65.0%
AATGGGGGCGGCGGAGTTGG+TGG + chr2.4:67223174-67223193 None:intergenic 70.0%
GTGAATGGGGGCGGCGGAGT+TGG + chr2.4:67223177-67223196 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 67223128 67226074 67223128 ID=MS.gene004407
chr2.4 mRNA 67223128 67226074 67223128 ID=MS.gene004407.t1;Parent=MS.gene004407
chr2.4 exon 67225874 67226074 67225874 ID=MS.gene004407.t1.exon1;Parent=MS.gene004407.t1
chr2.4 CDS 67225874 67226074 67225874 ID=cds.MS.gene004407.t1;Parent=MS.gene004407.t1
chr2.4 exon 67225044 67225109 67225044 ID=MS.gene004407.t1.exon2;Parent=MS.gene004407.t1
chr2.4 CDS 67225044 67225109 67225044 ID=cds.MS.gene004407.t1;Parent=MS.gene004407.t1
chr2.4 exon 67223128 67224336 67223128 ID=MS.gene004407.t1.exon3;Parent=MS.gene004407.t1
chr2.4 CDS 67223128 67224336 67223128 ID=cds.MS.gene004407.t1;Parent=MS.gene004407.t1
Gene Sequence

>MS.gene004407

ATGACTAAAATGAACTCATTTATCTCCTTGAAGGTAAAGTCTACCACCAACTCCGCCGCCCCCATTCACCATTCCTTTCAATACAATGTTCGTTACACGCTTATTGATATCAATCGTGCACCTCATGCATCTCCCAATCATCTTTCTTCCGATGAAGCTTGCCAAATTACTGATACCAACAAACTCATGTTACTCTTCTTCGTAATTTTTACTTTTCTTCATTAAATTTCTTAAGAGCCATTCATAAATTATGAATCACATCTCTTATATAACTAATATTTAATCACTCATACTTAAAATCCGACAAACTCTCATGACATAATAAAAGTTTTGTAATATTCACAACCTTAAATCAAGGAGCGTGATGCCAGTAGAGATATTATTATATGCCATAAATGACAATAACACTAGAAAAAAGAAGGGTTAAATAAGTTAATAGTCATCATAAATATACTAACATTTGATTTTAGTCCCCCTAAAATATTCTTCATGTTTTTGGTCCCTTTAAAGTTTTCCATCTATGAAATTAGTCTATGCTCTAGTGTAATACTCAATGTAGAGCAAAGACTAATTTCATAGATGAAAAATTTTAGAATGACCAAAAACCTGAAGAAAATTTTAGGGGGACTAAAATCAAATGTTGGTATATTTAGGGGACTATTTTCTTATTTAAACTAGAAAAAAATATAGGAGTATGAGGGTACCTTTGTTTACATCATAAAAAATGAAAGGATACCTTTATTTGCATTTTCCTTTTCGTGTGAAACTAGTAACTCAAAATGCGCGTGGTTTTCTTTCCTTATATCTGCTCTACTAGCTTCATATTTGCCACACAATAATCAAATCTTCCTATTAGCAAAAAATTAATCATCATTTTTTTATTTATTTTCCATTTTTCTCCTCACAAACAAAACAGTCTTCAAAAACCAGTCTTTATCTCTTTCTTTGTTTGTTGTGTTAAAAAGCAAACTCTACCTTCAACTGAATTGAATCTCATCTTTAGTACACAACAACCACTTTATTTGCTTCTTGTAAGTGTTCTGTTTTTTTACACCTCTTCACTTTACCTTGTTTCTTTGTGTGTTTTTGTTATGCTTCAATATTTGTTAACAGTTAACACATACATAAATTCTGGGTTGTCTTTGTTTTAATTCAGAAAAACACTTAGAATGTTTCCTCACTGTTATTTTCCTATAAAGTTGAGATTTTTATTTGATATTGCTTCTGGGGTGTTGTTTTTTGGAGACATGTGAATTGGGTTATTTGCTTTTGGTGCAAAATTATAGCTTTTTTGGTTCTTAAGTCTCAGTTAGTGCTAAAATTACTAGCTTTTTACGAAGTAGCAGGTTCTAACAACATCTTTTATGAGTTAAATGCTTTTGTTAAAGTTGATCAGTTGAATATCTAATAAGGGGAATTTACTGTTTTGTTTTATTCTATCTTCTTTTGGATCATTGTGGAGGAGGAATTGGTGCTTTTTTCTCTTTATTGTGGATTAGGATTTGGTGATTCCTTTAATTTGCTATAAAAAAATGTGAGTGTATCAGCTTAGGAGAATTTGGAATAGATTCTTATCTCTTGGATTGAAAATTTGGATGTTACTATTTAGTGTGATATTATTCCAACCAATTTGAGAACATAGTGGAAGCTAGAAATTGCATATATATTACAGAAAGTAACAAGTTTTATTGTTTCTTATTAAAGGGTTTAGGTTTGTATTTGAGATTTAACGATAAAGATAAGGATGCAGCGTGTTAGATTTTCGTCTCAACAAGCACCGGTTCACAAGCTAGGTGATCCTCAAATGACACTATCTCCCAAGTTTAGGTTAGCGGTGGTTCAATCTAACTTGACGAGTCCGATGCCAGAGTTAGATCATTCTCTAAGAGAAGAACCCTTAATTCCGGGCTTACCTGATGATGTTGCTCTTAATTGTCTTCTTCGTCTTCCGGTTCAAAGTCATTCATCCTGTAGGGCTGTCTGCAAGAGGTGGCATATGTTACTTGGTAGTAAAGAGAGGTTTTTTACTAATAGGAAGCAAATGGGTTTCAAAGATCCTTGGCTTTTTGTATTTGCATATCATAAGTGTACTGGAAAGATTCAATGGCAGGTTTTTGATCTAACTCACTTTTCTTGGCACACCATCCCTGCAATGCCTTGCAAGGACAAGGTTTGTCCTCATGGTTTTCGGTGTGTTTCGATGCCTCACGATGGTAATCTTTACGTATGCGGTGGCATGGTCTCTGACGTGGATTGTCCTCTTGACTTGGTGTTGAAATATGAGATCACGAAAAATCGTTGGACCGTGATGAATCGAATGATCAGTGCTAGGTCATTTTTTGCCAGTGGAGTAATCGATGGGATGGTTTATGCAGCTGGGGGGAATAGTACTGATCTTTATGAGCTGGATTCAGCTGAGGTATTAGATCCGATTAGCGGGAATTGGCACGCTATTGCCAACATGGGAACCAATATGGCATCCTATGATGCTGCAGTTCTGAACGGGAAACTGCTTGTAACAGAAGGATGGTTATGGCCTTTTTATGTCTCTCCTAGAGGACAGGTCTACGATCCGAGAACCAATAGCTGGGAAACTATGGCTGTTGGACTTAGAGAAGGGTGGACTGGTTCAAGCGTGGTTGTTTATGGCCACTTATTTGTTGTTTCTGAGCTCGAAAGAATGAAGCTTAAGGTTTATAACCAGGAAGCCGATTCCTGGGAAGCCATAGATGGCTCCCCTTTGCCTGAGCAAATATGCAAACCTTTTGCTGTGAATGCTTGTGATTGTCAAATTTATGTCGTAGGCCGGAATCTTCTGGTTGCTGTTGGTCATATCTCCATACTGAACCCAAAAGAAAGTTGTGAGGGGAAATGGAACTTCAGTGTTCAATGGCAAGTAATTGACGCGCCTAAAAGTTTATCCAATTTGACCCCTTCAAGCTCTCAG
Protein sequence

>MS.gene004407.t1

MTKMNSFISLKVKSTTNSAAPIHHSFQYNVRYTLIDINRAPHASPNHLSSDEACQITDTNKLMLLFFQTLPSTELNLIFSTQQPLYLLLIRMQRVRFSSQQAPVHKLGDPQMTLSPKFRLAVVQSNLTSPMPELDHSLREEPLIPGLPDDVALNCLLRLPVQSHSSCRAVCKRWHMLLGSKERFFTNRKQMGFKDPWLFVFAYHKCTGKIQWQVFDLTHFSWHTIPAMPCKDKVCPHGFRCVSMPHDGNLYVCGGMVSDVDCPLDLVLKYEITKNRWTVMNRMISARSFFASGVIDGMVYAAGGNSTDLYELDSAEVLDPISGNWHAIANMGTNMASYDAAVLNGKLLVTEGWLWPFYVSPRGQVYDPRTNSWETMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYNQEADSWEAIDGSPLPEQICKPFAVNACDCQIYVVGRNLLVAVGHISILNPKESCEGKWNFSVQWQVIDAPKSLSNLTPSSSQ