AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene004746

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004746.t1 MTR_1g073690 97.872 470 5 2 1 466 1 469 0.0 884
MS.gene004746.t1 MTR_3g055990 49.839 311 115 10 1 284 1 297 5.71e-87 275
MS.gene004746.t1 MTR_3g055990 49.839 311 115 10 1 284 1 297 6.37e-87 274
MS.gene004746.t1 MTR_2g026180 62.567 187 70 0 4 190 2 188 9.80e-85 269
MS.gene004746.t1 MTR_5g097580 62.827 191 69 1 1 191 1 189 3.72e-82 262
MS.gene004746.t1 MTR_5g097580 62.827 191 69 1 1 191 1 189 3.76e-82 262
MS.gene004746.t1 MTR_3g103420 54.315 197 85 3 1 192 5 201 2.51e-66 218
MS.gene004746.t1 MTR_6g004810 43.750 208 97 5 6 209 45 236 2.70e-51 178
MS.gene004746.t1 MTR_6g004810 45.055 91 49 1 96 186 33 122 1.44e-17 84.7
MS.gene004746.t1 MTR_2g026180 61.207 116 45 0 75 190 3 118 4.04e-44 160
MS.gene004746.t1 MTR_2g026180 32.927 82 54 1 7 87 37 118 7.94e-13 70.5
MS.gene004746.t1 MTR_3g082650 37.912 182 98 3 6 186 18 185 5.69e-43 155
MS.gene004746.t1 MTR_3g082650 50.000 96 45 2 91 186 3 95 4.21e-22 97.8
MS.gene004746.t1 MTR_5g017280 34.387 253 141 5 4 247 2 238 2.37e-37 140
MS.gene004746.t1 MTR_5g017280 30.342 234 130 6 7 208 93 325 3.79e-22 98.2
MS.gene004746.t1 MTR_5g017280 34.387 253 141 5 4 247 2 238 3.71e-37 140
MS.gene004746.t1 MTR_5g017280 30.342 234 130 6 7 208 93 325 4.07e-22 98.2
MS.gene004746.t1 MTR_8g463890 30.108 186 114 2 2 184 69 241 1.06e-24 106
MS.gene004746.t1 MTR_4g088010 30.055 183 113 3 2 184 72 239 5.88e-20 91.3
MS.gene004746.t1 MTR_3g116130 40.000 80 47 1 2 80 25 104 1.30e-16 80.5
MS.gene004746.t1 MTR_3g116130 37.037 81 51 0 103 183 24 104 8.81e-11 63.2
MS.gene004746.t1 MTR_5g064120 38.750 80 48 1 2 80 12 91 8.00e-16 78.2
MS.gene004746.t1 MTR_5g088220 24.865 185 131 2 1 184 160 337 8.81e-16 80.1
MS.gene004746.t1 MTR_3g116130 40.000 80 47 1 2 80 25 104 1.06e-15 79.0
MS.gene004746.t1 MTR_4g035310 36.250 80 50 1 2 80 12 91 7.39e-15 75.1
MS.gene004746.t1 MTR_4g035310 36.250 80 50 1 2 80 12 91 8.85e-15 74.7
MS.gene004746.t1 MTR_3g092490 33.333 108 70 2 2 108 22 128 9.84e-15 74.3
MS.gene004746.t1 MTR_3g092490 33.333 108 70 2 2 108 22 128 9.88e-15 74.3
MS.gene004746.t1 MTR_7g088140 24.457 184 138 1 2 184 123 306 1.45e-14 76.3
MS.gene004746.t1 MTR_8g024520 30.496 141 81 4 2 133 21 153 1.46e-14 74.3
MS.gene004746.t1 MTR_8g024520 40.476 84 47 1 81 164 1 81 2.21e-11 64.7
MS.gene004746.t1 MTR_8g024520 30.496 141 81 4 2 133 21 153 1.49e-14 74.3
MS.gene004746.t1 MTR_8g024520 40.476 84 47 1 81 164 1 81 2.25e-11 64.7
MS.gene004746.t1 MTR_4g104470 31.447 159 97 3 3 159 119 267 1.60e-14 74.3
MS.gene004746.t1 MTR_4g104470 43.750 80 42 2 109 186 123 201 1.04e-11 66.2
MS.gene004746.t1 MTR_7g013730 44.304 79 42 1 7 83 41 119 1.62e-14 73.6
MS.gene004746.t1 MTR_7g013730 39.773 88 51 2 105 191 37 123 1.92e-11 64.7
MS.gene004746.t1 MTR_3g092490 33.333 108 70 2 2 108 22 128 2.11e-14 71.6
MS.gene004746.t1 MTR_7g117495 37.500 80 49 1 2 80 14 93 8.51e-14 71.6
MS.gene004746.t1 MTR_7g117495 37.500 80 49 1 2 80 14 93 1.16e-13 71.2
MS.gene004746.t1 MTR_7g088140 24.457 184 138 1 2 184 123 306 1.41e-13 73.2
MS.gene004746.t1 MTR_1g064230 30.808 198 117 6 7 190 85 276 2.26e-13 70.9
MS.gene004746.t1 MTR_4g085540 28.977 176 111 5 8 178 215 381 3.45e-13 72.4
MS.gene004746.t1 MTR_2g097960 30.952 168 90 4 8 166 17 167 5.28e-13 70.9
MS.gene004746.t1 MTR_3g065190 29.121 182 112 5 9 188 28 194 1.12e-12 69.7
MS.gene004746.t1 MTR_3g084040 38.961 77 47 0 104 180 32 108 1.56e-12 65.5
MS.gene004746.t1 MTR_3g080130 42.029 69 37 1 7 75 37 102 4.69e-12 63.9
MS.gene004746.t1 MTR_4g109540 42.308 78 44 1 107 183 41 118 6.52e-12 66.2
MS.gene004746.t1 MTR_4g109540 52.083 48 23 0 7 54 43 90 1.63e-11 65.1
MS.gene004746.t1 MTR_1g097440 27.778 180 109 7 8 178 211 378 9.91e-12 67.8
MS.gene004746.t1 MTR_3g014000 54.167 48 18 1 8 55 36 79 1.32e-11 62.4
MS.gene004746.t1 MTR_4g070190 34.211 76 48 1 7 80 9 84 1.70e-11 62.8
MS.gene004746.t1 MTR_4g070080 32.895 76 49 1 7 80 7 82 1.86e-11 62.0
MS.gene004746.t1 MTR_7g102730 24.419 172 125 4 2 171 185 353 2.84e-11 66.2
MS.gene004746.t1 MTR_4g070080 32.895 76 49 1 7 80 7 82 4.83e-11 61.6
MS.gene004746.t1 MTR_4g124940 25.161 310 181 12 8 294 48 329 5.94e-11 64.7
MS.gene004746.t1 MTR_3g101370 25.641 156 105 3 3 156 90 236 6.97e-11 64.3
MS.gene004746.t1 MTR_3g025880 37.349 83 49 2 108 187 44 126 7.46e-11 64.3
MS.gene004746.t1 MTR_4g070140 32.895 76 49 1 7 80 9 84 8.68e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004746.t1 AT2G33410 56.659 413 144 6 1 409 1 382 4.99e-120 357
MS.gene004746.t1 AT4G14300 58.807 352 121 6 1 345 1 335 7.24e-109 328
MS.gene004746.t1 AT4G14300 58.807 352 121 6 1 345 1 335 7.24e-109 328
MS.gene004746.t1 AT5G55550 59.361 219 70 3 1 206 1 213 2.16e-86 272
MS.gene004746.t1 AT5G55550 59.361 219 70 3 1 206 1 213 2.16e-86 272
MS.gene004746.t1 AT5G55550 59.361 219 70 3 1 206 1 213 2.16e-86 272
MS.gene004746.t1 AT5G55550 59.361 219 70 3 1 206 1 213 2.16e-86 272
MS.gene004746.t1 AT5G55550 59.361 219 70 3 1 206 1 213 2.16e-86 272
MS.gene004746.t1 AT5G55550 59.361 219 70 3 1 206 1 213 3.75e-86 272
MS.gene004746.t1 AT5G55550 59.361 219 70 3 1 206 1 213 3.75e-86 272
MS.gene004746.t1 AT5G55550 59.361 219 70 3 1 206 1 213 3.75e-86 272
MS.gene004746.t1 AT5G55550 59.361 219 70 3 1 206 1 213 3.75e-86 272
MS.gene004746.t1 AT4G26650 62.304 191 67 1 3 188 9 199 2.47e-83 264
MS.gene004746.t1 AT4G26650 62.304 191 67 1 3 188 12 202 2.68e-83 264
MS.gene004746.t1 AT3G07810 59.500 200 81 0 1 200 1 200 3.00e-81 260
MS.gene004746.t1 AT3G07810 59.500 200 81 0 1 200 1 200 3.15e-81 260
MS.gene004746.t1 AT5G55550 48.872 266 70 4 1 206 1 260 1.97e-77 250
MS.gene004746.t1 AT5G55550 48.872 266 70 4 1 206 1 260 2.33e-77 250
MS.gene004746.t1 AT5G47620 55.080 187 82 1 1 187 1 185 3.86e-72 234
MS.gene004746.t1 AT5G47620 55.080 187 82 1 1 187 1 185 3.86e-72 234
MS.gene004746.t1 AT5G47620 55.080 187 82 1 1 187 1 185 3.86e-72 234
MS.gene004746.t1 AT5G47620 49.282 209 82 2 1 187 1 207 4.49e-67 222
MS.gene004746.t1 AT1G58470 48.744 199 90 2 1 187 1 199 1.06e-57 194
MS.gene004746.t1 AT1G58470 48.744 199 90 2 1 187 1 199 1.06e-57 194
MS.gene004746.t1 AT1G17640 44.444 207 103 2 6 211 66 261 1.15e-54 187
MS.gene004746.t1 AT1G17640 44.444 207 103 2 6 211 66 261 1.15e-54 187
MS.gene004746.t1 AT1G17640 44.444 207 103 2 6 211 66 261 1.15e-54 187
MS.gene004746.t1 AT3G13224 43.617 188 85 3 6 188 19 190 5.68e-51 177
MS.gene004746.t1 AT3G13224 49.474 95 47 1 92 186 3 96 4.33e-21 94.7
MS.gene004746.t1 AT3G13224 43.316 187 85 3 7 188 11 181 9.94e-50 173
MS.gene004746.t1 AT3G13224 50.000 82 40 1 105 186 7 87 4.76e-20 91.7
MS.gene004746.t1 AT3G13224 44.311 167 73 2 6 168 19 169 1.26e-44 156
MS.gene004746.t1 AT3G13224 49.474 95 47 1 92 186 3 96 3.10e-20 89.7
MS.gene004746.t1 AT5G47620 52.381 126 57 2 63 187 2 125 1.60e-37 141
MS.gene004746.t1 AT5G47620 30.612 98 66 2 3 99 43 139 1.03e-11 66.6
MS.gene004746.t1 AT5G40490 31.727 249 140 5 6 253 42 261 7.70e-31 124
MS.gene004746.t1 AT4G36960 33.333 198 109 4 5 196 2 182 5.26e-30 120
MS.gene004746.t1 AT4G36960 25.862 232 116 4 7 187 92 318 7.13e-18 85.5
MS.gene004746.t1 AT4G36960 33.333 198 109 4 5 196 2 182 5.26e-30 120
MS.gene004746.t1 AT4G36960 25.862 232 116 4 7 187 92 318 7.13e-18 85.5
MS.gene004746.t1 AT5G40490 33.047 233 122 4 24 253 43 244 1.46e-28 117
MS.gene004746.t1 AT5G40490 47.826 69 33 2 118 186 37 102 9.31e-13 70.1
MS.gene004746.t1 AT3G15010 30.108 186 114 2 2 184 71 243 2.45e-21 96.3
MS.gene004746.t1 AT3G15010 30.108 186 114 2 2 184 71 243 2.45e-21 96.3
MS.gene004746.t1 AT1G20880 42.500 80 45 1 2 80 20 99 1.40e-17 83.2
MS.gene004746.t1 AT1G20880 42.500 80 45 1 2 80 20 99 1.40e-17 83.2
MS.gene004746.t1 AT1G20880 42.500 80 45 1 2 80 20 99 1.40e-17 83.2
MS.gene004746.t1 AT1G76460 41.250 80 46 1 2 80 20 99 2.64e-17 82.4
MS.gene004746.t1 AT1G76460 29.707 239 129 7 103 303 19 256 2.97e-12 67.4
MS.gene004746.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004746.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004746.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004746.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004746.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004746.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004746.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004746.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004746.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004746.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004746.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004746.t1 AT3G54770 37.500 80 49 1 2 80 13 92 8.87e-15 74.7
MS.gene004746.t1 AT2G41060 24.832 298 193 6 2 284 124 405 8.90e-15 76.6
MS.gene004746.t1 AT2G41060 24.832 298 193 6 2 284 124 405 8.90e-15 76.6
MS.gene004746.t1 AT2G41060 24.832 298 193 6 2 284 124 405 8.90e-15 76.6
MS.gene004746.t1 AT4G39260 36.709 79 48 1 7 83 7 85 9.37e-15 70.1
MS.gene004746.t1 AT3G54770 37.500 80 49 1 2 80 13 92 9.70e-15 74.7
MS.gene004746.t1 AT2G23350 30.114 176 109 5 8 178 227 393 1.08e-14 77.0
MS.gene004746.t1 AT4G24770 29.444 180 109 5 3 179 147 311 1.10e-14 75.5
MS.gene004746.t1 AT4G24770 29.444 180 109 5 3 179 147 311 1.10e-14 75.5
MS.gene004746.t1 AT3G26420 41.026 78 45 1 109 185 8 85 5.00e-14 72.0
MS.gene004746.t1 AT1G33470 35.000 80 51 1 2 80 3 82 5.12e-14 72.0
MS.gene004746.t1 AT1G33470 35.000 80 51 1 2 80 3 82 5.34e-14 72.0
MS.gene004746.t1 AT1G33470 35.000 80 51 1 2 80 3 82 5.41e-14 72.0
MS.gene004746.t1 AT2G37220 31.053 190 117 5 7 183 92 280 1.32e-13 71.6
MS.gene004746.t1 AT3G23830 35.514 107 60 3 93 190 12 118 2.57e-13 67.4
MS.gene004746.t1 AT3G23830 36.145 83 51 1 7 87 36 118 3.95e-11 61.2
MS.gene004746.t1 AT3G23830 35.514 107 60 3 93 190 12 118 2.57e-13 67.4
MS.gene004746.t1 AT3G23830 36.145 83 51 1 7 87 36 118 3.95e-11 61.2
MS.gene004746.t1 AT5G61030 40.000 80 47 1 105 183 37 116 2.67e-13 70.9
MS.gene004746.t1 AT5G61030 37.975 79 47 1 7 83 41 119 1.51e-11 65.9
MS.gene004746.t1 AT5G61030 40.000 80 47 1 105 183 37 116 2.67e-13 70.9
MS.gene004746.t1 AT5G61030 37.975 79 47 1 7 83 41 119 1.51e-11 65.9
MS.gene004746.t1 AT3G16380 28.485 165 108 5 2 161 198 357 3.02e-13 72.4
MS.gene004746.t1 AT1G78260 35.000 80 51 1 2 80 13 92 3.02e-13 70.5
MS.gene004746.t1 AT5G04280 37.975 79 48 1 109 186 8 86 3.07e-13 70.9
MS.gene004746.t1 AT5G04280 35.526 76 47 1 7 80 8 83 7.21e-13 69.7
MS.gene004746.t1 AT1G22910 30.435 115 74 3 2 115 9 118 3.30e-13 69.7
MS.gene004746.t1 AT1G22330 35.000 80 51 1 2 80 13 92 3.56e-13 70.5
MS.gene004746.t1 AT1G22910 30.435 115 74 3 2 115 9 118 3.61e-13 69.7
MS.gene004746.t1 AT4G16280 28.037 214 115 9 7 204 46 236 3.78e-13 72.0
MS.gene004746.t1 AT4G16280 28.037 214 115 9 7 204 121 311 3.86e-13 72.4
MS.gene004746.t1 AT4G00830 25.000 152 90 3 7 156 117 246 4.09e-13 71.6
MS.gene004746.t1 AT2G36660 27.059 170 111 6 8 171 203 365 6.36e-13 71.2
MS.gene004746.t1 AT4G16280 28.037 214 115 9 7 204 121 311 6.77e-13 71.2
MS.gene004746.t1 AT4G00830 25.974 154 86 5 7 156 117 246 7.09e-13 70.9
MS.gene004746.t1 AT4G00830 25.974 154 86 5 7 156 117 246 7.09e-13 70.9
MS.gene004746.t1 AT4G00830 25.974 154 86 5 7 156 117 246 7.09e-13 70.9
MS.gene004746.t1 AT1G78260 35.000 80 51 1 2 80 13 92 7.18e-13 69.3
MS.gene004746.t1 AT2G46780 32.500 80 53 1 2 80 18 97 8.32e-13 69.7
MS.gene004746.t1 AT2G46780 35.714 84 54 0 101 184 15 98 2.51e-11 65.5
MS.gene004746.t1 AT2G46780 32.500 80 53 1 2 80 18 97 8.32e-13 69.7
MS.gene004746.t1 AT2G46780 35.714 84 54 0 101 184 15 98 2.51e-11 65.5
MS.gene004746.t1 AT4G39260 34.146 82 52 1 1 80 1 82 8.83e-13 65.5
MS.gene004746.t1 AT1G60650 40.659 91 52 2 97 186 2 91 1.70e-12 68.6
MS.gene004746.t1 AT1G60650 37.500 64 40 0 5 68 11 74 2.87e-11 64.7
MS.gene004746.t1 AT1G60650 40.659 91 52 2 97 186 2 91 1.70e-12 68.6
MS.gene004746.t1 AT1G60650 37.500 64 40 0 5 68 11 74 2.87e-11 64.7
MS.gene004746.t1 AT3G19130 28.251 223 132 7 4 214 106 312 1.75e-12 69.7
MS.gene004746.t1 AT4G39260 35.526 76 47 1 7 80 7 82 2.21e-12 65.9
MS.gene004746.t1 AT4G39260 36.364 66 42 0 1 66 1 66 3.15e-12 63.5
MS.gene004746.t1 AT4G34110 27.273 176 120 4 8 181 217 386 3.20e-12 69.3
MS.gene004746.t1 AT2G18510 27.869 183 115 4 8 188 27 194 3.29e-12 68.2
MS.gene004746.t1 AT5G50250 29.518 166 97 4 4 163 111 262 4.00e-12 67.4
MS.gene004746.t1 AT1G22910 30.435 115 74 3 2 115 9 118 4.83e-12 67.8
MS.gene004746.t1 AT1G49600 28.755 233 137 8 4 229 117 327 8.93e-12 67.4
MS.gene004746.t1 AT5G54900 26.768 198 117 5 3 193 57 233 9.82e-12 67.0
MS.gene004746.t1 AT2G21660 34.211 76 48 1 7 80 9 84 1.69e-11 62.8
MS.gene004746.t1 AT2G21660 34.211 76 48 1 7 80 9 84 2.37e-11 62.8
MS.gene004746.t1 AT4G13850 50.000 50 25 0 7 56 36 85 2.38e-11 62.0
MS.gene004746.t1 AT4G13850 50.000 50 25 0 7 56 36 85 2.89e-11 62.0
MS.gene004746.t1 AT4G13850 50.000 50 25 0 7 56 36 85 3.21e-11 62.0
MS.gene004746.t1 AT1G22760 27.879 165 93 5 5 161 135 281 4.05e-11 65.9
MS.gene004746.t1 AT1G74230 34.286 105 65 1 79 183 9 109 4.08e-11 64.3
MS.gene004746.t1 AT4G00830 25.000 152 82 4 7 156 117 238 6.92e-11 64.7
MS.gene004746.t1 AT4G00830 25.000 152 82 4 7 156 117 238 6.92e-11 64.7
MS.gene004746.t1 AT5G19350 25.654 191 119 5 8 193 26 198 7.09e-11 64.3
MS.gene004746.t1 AT5G19350 25.654 191 119 5 8 193 26 198 7.13e-11 64.3
MS.gene004746.t1 AT4G13860 41.892 74 42 1 109 181 4 77 8.13e-11 58.9

Find 191 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAGTGCAGCGGCTGGATA+TGG 0.199366 1.1:+55629730 MS.gene004746:CDS
GCTCAAGCATCTGGTAATTA+TGG 0.207271 1.1:+55629997 MS.gene004746:CDS
CGTCAGTACTTTGAGGCTTA+TGG 0.215160 1.1:+55629073 MS.gene004746:CDS
AACGACCATCATATGCATTT+TGG 0.220885 1.1:-55629354 None:intergenic
TCCCTCTGGCTATGGCTCTA+TGG 0.223448 1.1:+55629633 MS.gene004746:CDS
TACGGTGCTGCTGCTGGATA+TGG 0.233890 1.1:+55629445 MS.gene004746:CDS
GGGGACACAAATGGAAATTC+TGG 0.245972 1.1:+55629943 MS.gene004746:CDS
AAGACATTTCATGATTTAAA+TGG 0.251191 1.1:+55629202 MS.gene004746:CDS
CAGATCCTTCTGTTCTTGAT+AGG 0.255513 1.1:+55627742 MS.gene004746:CDS
GGTGGAAGTGATAATTCTTA+TGG 0.266263 1.1:+55629793 MS.gene004746:CDS
AGATCTGGAAACTCCAATTC+TGG 0.283173 1.1:+55628977 MS.gene004746:CDS
GGTGCTGTTGGTGGGCGTAC+TGG 0.285659 1.1:+55629832 MS.gene004746:CDS
ACTGGACGACCACGAGGATT+TGG 0.286841 1.1:+55629133 MS.gene004746:CDS
AAGGAGCATTTCAGCAATTA+TGG 0.288185 1.1:+55627645 MS.gene004746:CDS
TGACCACTAGCATTACTATT+TGG 0.290071 1.1:-55629862 None:intergenic
TTACGGTAACGCTGCTCCTT+GGG 0.294029 1.1:+55629657 MS.gene004746:CDS
CCAAGTGGTGGTGCTGGATC+TGG 0.298460 1.1:+55629685 MS.gene004746:CDS
GCTGTTGGGCTTGTCGAGAC+TGG 0.303409 1.1:-55630074 None:intergenic
GCTAGCAATGGCCTTGGTTA+TGG 0.305001 1.1:+55629478 MS.gene004746:CDS
ATTTCCACCATTCCCAGAAT+TGG 0.306814 1.1:-55628990 None:intergenic
TGGTGGCAGTGGCAGCTATA+TGG 0.319199 1.1:+55629909 MS.gene004746:CDS
TAAGCAGCATTAGGGACATT+TGG 0.319444 1.1:-55629571 None:intergenic
CACCAGGATTGGCATCCTTT+GGG 0.321613 1.1:-55629252 None:intergenic
TATCAAGGGTATGGAGCTTC+TGG 0.321667 1.1:+55629325 MS.gene004746:CDS
CCACCAGCATAAGCAGCATT+AGG 0.341386 1.1:-55629580 None:intergenic
GTGGTGGCCCAAGGAGTTCA+TGG 0.341617 1.1:+55629599 MS.gene004746:CDS
GCACCAGGATTGGCATCCTT+TGG 0.343147 1.1:-55629253 None:intergenic
GCAGGTGGATTCCCACCTTA+TGG 0.345772 1.1:+55629412 MS.gene004746:CDS
AGCTATATGGGCAGTGGCTA+TGG 0.349286 1.1:+55629922 MS.gene004746:CDS
GAAGACAAACATGTTATTGA+TGG 0.351272 1.1:+55627771 MS.gene004746:CDS
ATTTCTGTCTCTTCGAGATC+TGG 0.352182 1.1:+55628962 MS.gene004746:CDS
GGTGCTCCAAGTGGTGGTGC+TGG 0.352327 1.1:+55629679 MS.gene004746:CDS
TATGGGAATCCAGGTGTATA+TGG 0.357794 1.1:+55629811 MS.gene004746:CDS
GTGCTGTTGGTGGGCGTACT+GGG 0.358635 1.1:+55629833 MS.gene004746:CDS
AAGCAGCATTAGGGACATTT+GGG 0.361470 1.1:-55629570 None:intergenic
TATGGGACTCCTCAGGGAAA+TGG 0.366806 1.1:+55630015 MS.gene004746:CDS
CTGGACGACCACGAGGATTT+GGG 0.374739 1.1:+55629134 MS.gene004746:CDS
CCCTCTGGCTATGGCTCTAT+GGG 0.377410 1.1:+55629634 MS.gene004746:CDS
CTCTCTTGAGAAAGCCCTCT+TGG 0.380820 1.1:-55628930 None:intergenic
GGTGGTTATGGCGGCGGGTA+TGG 0.383764 1.1:+55629772 MS.gene004746:CDS
GGTGGTGCCGCTGCTGGTTA+TGG 0.386143 1.1:+55629520 MS.gene004746:CDS
ACTATCAAAATTACTGCTGT+TGG 0.386629 1.1:-55630089 None:intergenic
ACCTAGAGGCTTTGGTTTCG+TGG 0.390416 1.1:+55627713 MS.gene004746:CDS
ATGGGACTCCTCAGGGAAAT+GGG 0.391721 1.1:+55630016 MS.gene004746:CDS
GGAGGTGGTAGTGGCGGAAT+GGG 0.393257 1.1:+55629298 MS.gene004746:CDS
GCTCAGGCTCCCTCTGGCTA+TGG 0.395122 1.1:+55629625 MS.gene004746:CDS
TGAGCAGGCCATGAACTCCT+TGG 0.399463 1.1:-55629607 None:intergenic
TCTGCTTACGGTGCTGCTGC+TGG 0.402283 1.1:+55629439 MS.gene004746:CDS
CTATCAAAATTACTGCTGTT+GGG 0.403143 1.1:-55630088 None:intergenic
GCTGGTTATGGTGGTGGCTA+TGG 0.403993 1.1:+55630045 MS.gene004746:CDS
GGGCAAGCTGGTTATGGTGG+TGG 0.405622 1.1:+55630039 MS.gene004746:CDS
CTCGTGGTCGTCCAGTATTT+TGG 0.406861 1.1:-55629126 None:intergenic
AAGGAGTTCATGGCCTGCTC+AGG 0.407314 1.1:+55629609 MS.gene004746:CDS
ACTGGTAAACCTAGAGGCTT+TGG 0.407636 1.1:+55627705 MS.gene004746:CDS
CCCATATCCAGCCGCTGCAC+TGG 0.408284 1.1:-55629731 None:intergenic
CTCAAGCATCTGGTAATTAT+GGG 0.410457 1.1:+55629998 MS.gene004746:CDS
ATACCGAGGAGGCAGTTGAT+AGG 0.410687 1.1:+55629170 MS.gene004746:CDS
AAAATTCCGTCAGTACTTTG+AGG 0.411179 1.1:+55629066 MS.gene004746:CDS
GTTACGGTAACGCTGCTCCT+TGG 0.411640 1.1:+55629656 MS.gene004746:CDS
GGACCTGCTGCTGCAACATA+TGG 0.415752 1.1:+55629544 MS.gene004746:CDS
TAGCCAGAGGGAGCCTGAGC+AGG 0.416103 1.1:-55629622 None:intergenic
AAATAGTAATGCTAGTGGTC+AGG 0.416638 1.1:+55629864 MS.gene004746:CDS
AGATCCTTCTGTTCTTGATA+GGG 0.422703 1.1:+55627743 MS.gene004746:CDS
TGGAGGGTTGCCTCCCACTC+TGG 0.424326 1.1:+55629036 MS.gene004746:CDS
GTCATGTATGACCAAAATAC+TGG 0.425122 1.1:+55629115 MS.gene004746:CDS
GGTTACGGGTATGGTGGTTA+TGG 0.425539 1.1:+55629760 MS.gene004746:CDS
TGGAGGTGGTAGTGGCGGAA+TGG 0.426792 1.1:+55629297 MS.gene004746:CDS
CACCAGCATAAGCAGCATTA+GGG 0.428191 1.1:-55629579 None:intergenic
GTGGAAGTGATAATTCTTAT+GGG 0.428912 1.1:+55629794 MS.gene004746:CDS
TTCCCATATGTTGCAGCAGC+AGG 0.429236 1.1:-55629547 None:intergenic
GGTGGTGCTGGAGGTGGTAG+TGG 0.429702 1.1:+55629289 MS.gene004746:CDS
GAGCAGGCCATGAACTCCTT+GGG 0.431541 1.1:-55629606 None:intergenic
TGGCCTGCTCAGGCTCCCTC+TGG 0.433036 1.1:+55629619 MS.gene004746:CDS
TCTGAACAGGCTCAAGCATC+TGG 0.438324 1.1:+55629988 MS.gene004746:CDS
AATCCACCTGCAGCACTTTG+AGG 0.446480 1.1:-55629400 None:intergenic
TGCAGCTTGGAGATCTGAAC+AGG 0.449022 1.1:+55629975 MS.gene004746:CDS
CTGTTGGGCTTGTCGAGACT+GGG 0.450476 1.1:-55630073 None:intergenic
GGCGGAATGGGTGGTTATCA+AGG 0.451686 1.1:+55629310 MS.gene004746:CDS
GGCTATGGCTCTATGGGTTA+CGG 0.452769 1.1:+55629640 MS.gene004746:CDS
GCTATATGGGCAGTGGCTAT+GGG 0.453617 1.1:+55629923 MS.gene004746:CDS
CTCCCAAAGGATGCCAATCC+TGG 0.453968 1.1:+55629250 MS.gene004746:CDS
CCAGTGCAGCGGCTGGATAT+GGG 0.457614 1.1:+55629731 MS.gene004746:CDS
TGGTAATTATGGGACTCCTC+AGG 0.457704 1.1:+55630008 MS.gene004746:CDS
CTTATGCTGGTGGTGGCCCA+AGG 0.460869 1.1:+55629590 MS.gene004746:CDS
CTTGGTTATGGTGCAGCATA+TGG 0.461527 1.1:+55629490 MS.gene004746:CDS
GGGAATCAAGGTTACGGGTA+TGG 0.463883 1.1:+55629751 MS.gene004746:CDS
GGTGGCAGTGGCAGCTATAT+GGG 0.464849 1.1:+55629910 MS.gene004746:CDS
GGGACTCCTCAGGGAAATGG+GGG 0.464934 1.1:+55630018 MS.gene004746:CDS
AAAGGAATGGATTCGGATCA+AGG 0.465987 1.1:+55627573 None:intergenic
GATATGGGAATCAAGGTTAC+GGG 0.468359 1.1:+55629746 MS.gene004746:CDS
GATCTGGAAACTCCAATTCT+GGG 0.470761 1.1:+55628978 MS.gene004746:CDS
GATAATTCTTATGGGAATCC+AGG 0.473239 1.1:+55629802 MS.gene004746:CDS
TGGGACTCCTCAGGGAAATG+GGG 0.473876 1.1:+55630017 MS.gene004746:CDS
CCTTATGGATCCTCTGCTTA+CGG 0.480491 1.1:+55629427 MS.gene004746:CDS
ACAAATGGAAATTCTGGGTA+TGG 0.484706 1.1:+55629949 MS.gene004746:CDS
ACGGCTATTTGCACCAGGAT+TGG 0.486166 1.1:-55629263 None:intergenic
GTCCCTAATGCTGCTTATGC+TGG 0.490213 1.1:+55629577 MS.gene004746:CDS
GGTTCGGCTAGCAATGGCCT+TGG 0.491314 1.1:+55629472 MS.gene004746:CDS
CAATCTCCCAGTGCAGCGGC+TGG 0.493261 1.1:+55629724 MS.gene004746:CDS
AACCCTATCAACTGCCTCCT+CGG 0.494485 1.1:-55629173 None:intergenic
ATGCAGCCTCAAAGTGCTGC+AGG 0.496615 1.1:+55629394 MS.gene004746:CDS
GGATATGGGAATCAAGGTTA+CGG 0.497803 1.1:+55629745 MS.gene004746:CDS
ACGGTGCTGCTGCTGGATAT+GGG 0.503532 1.1:+55629446 MS.gene004746:CDS
AGTTATGGTGGTGCCGCTGC+TGG 0.506490 1.1:+55629514 MS.gene004746:CDS
GGGACACAAATGGAAATTCT+GGG 0.506783 1.1:+55629944 MS.gene004746:CDS
AGTGGCTATGGGGACACAAA+TGG 0.508337 1.1:+55629934 MS.gene004746:CDS
CCAGATCCAGCACCACCACT+TGG 0.509006 1.1:-55629685 None:intergenic
TCCTGGTGCAAATAGCCGTA+TGG 0.510146 1.1:+55629267 MS.gene004746:CDS
GGTTATGGCGGCGGGTATGG+TGG 0.511710 1.1:+55629775 MS.gene004746:CDS
GGATCTGGTGCAGCAACTGC+AGG 0.512933 1.1:+55629700 MS.gene004746:CDS
CGTATGGGTGGTGCTGGAGG+TGG 0.515469 1.1:+55629283 MS.gene004746:CDS
TACCGAGGAGGCAGTTGATA+GGG 0.519939 1.1:+55629171 MS.gene004746:CDS
GGTGTATATGGTGCTGTTGG+TGG 0.522591 1.1:+55629823 MS.gene004746:CDS
GGTGGTAGTGGCGGAATGGG+TGG 0.522676 1.1:+55629301 MS.gene004746:CDS
GATCTCGAAGAGACAGAAAT+CGG 0.523559 1.1:-55628959 None:intergenic
CCATATCCAGCCGCTGCACT+GGG 0.523919 1.1:-55629730 None:intergenic
GCTGCTGCTGGATATGGGTA+TGG 0.524368 1.1:+55629451 MS.gene004746:CDS
GGAAACTCCAATTCTGGGAA+TGG 0.526118 1.1:+55628983 MS.gene004746:CDS
GGTGCAGCATATGGAAGTTA+TGG 0.528477 1.1:+55629499 MS.gene004746:CDS
TGCTGGATATGGGTATGGTT+CGG 0.529889 1.1:+55629456 MS.gene004746:CDS
AATAGCCGTATGGGTGGTGC+TGG 0.531723 1.1:+55629277 MS.gene004746:CDS
GGTAGTGAACTGCAAGGTAG+TGG 0.533329 1.1:+55629889 MS.gene004746:CDS
CCCATACGGCTATTTGCACC+AGG 0.534366 1.1:-55629268 None:intergenic
ATGGGTGGTTATCAAGGGTA+TGG 0.538262 1.1:+55629316 MS.gene004746:CDS
CCTTGGGGTGCTCCAAGTGG+TGG 0.539752 1.1:+55629673 MS.gene004746:CDS
GGTGCTGGAGGTGGTAGTGG+CGG 0.542113 1.1:+55629292 MS.gene004746:CDS
TTTCATCGGTGGGATTTCAT+GGG 0.547867 1.1:+55627602 MS.gene004746:CDS
GGTTATGGTGGTGGCTATGG+TGG 0.548099 1.1:+55630048 MS.gene004746:CDS
GGTAATTATGGGACTCCTCA+GGG 0.549138 1.1:+55630009 MS.gene004746:CDS
GGGTATGGTGGTTATGGCGG+CGG 0.549502 1.1:+55629766 MS.gene004746:CDS
CCAGGTGTATATGGTGCTGT+TGG 0.550786 1.1:+55629820 MS.gene004746:CDS
GCGGCTGGATATGGGAATCA+AGG 0.551018 1.1:+55629739 MS.gene004746:CDS
AATGCTGCTTATGCTGGTGG+TGG 0.553175 1.1:+55629583 MS.gene004746:CDS
AACTCCAATTCTGGGAATGG+TGG 0.554277 1.1:+55628986 MS.gene004746:CDS
AATAGTAATGCTAGTGGTCA+GGG 0.554643 1.1:+55629865 MS.gene004746:CDS
GACCTGCTGCTGCAACATAT+GGG 0.557841 1.1:+55629545 MS.gene004746:CDS
GTGTATATGGTGCTGTTGGT+GGG 0.561548 1.1:+55629824 MS.gene004746:CDS
CCTGGTGCAAATAGCCGTAT+GGG 0.563282 1.1:+55629268 MS.gene004746:CDS
CTGGGTATGGAAATGCAGCT+TGG 0.563448 1.1:+55629962 MS.gene004746:CDS
AGCAGCAGCACCGTAAGCAG+AGG 0.566324 1.1:-55629437 None:intergenic
GGACTCCTCAGGGAAATGGG+GGG 0.568599 1.1:+55630019 MS.gene004746:CDS
AGCCGTATGGGTGGTGCTGG+AGG 0.570725 1.1:+55629280 MS.gene004746:CDS
GGTATGGTGGTTATGGCGGC+GGG 0.573792 1.1:+55629767 MS.gene004746:CDS
CCTAATGCTGCTTATGCTGG+TGG 0.574642 1.1:+55629580 MS.gene004746:CDS
TACGGTAACGCTGCTCCTTG+GGG 0.578018 1.1:+55629658 MS.gene004746:CDS
CAAGGGTATGGAGCTTCTGG+TGG 0.579903 1.1:+55629328 MS.gene004746:CDS
CCGTAAGCAGAGGATCCATA+AGG 0.580853 1.1:-55629427 None:intergenic
ATGGTCGTTCAGATTCTAGT+AGG 0.588507 1.1:+55629368 MS.gene004746:CDS
GGTGCCGCTGCTGGTTATGG+TGG 0.588780 1.1:+55629523 MS.gene004746:CDS
GCGGAATGGGTGGTTATCAA+GGG 0.588939 1.1:+55629311 MS.gene004746:CDS
TTTAAATGGTAAACAAGTAG+AGG 0.589277 1.1:+55629216 MS.gene004746:CDS
TATTCAGGTTGATGCCAAGA+GGG 0.591422 1.1:+55628916 MS.gene004746:intron
TCGAAGAGACAGAAATCGGT+TGG 0.596694 1.1:-55628955 None:intergenic
CATAAGCCTCAAAGTACTGA+CGG 0.596705 1.1:-55629072 None:intergenic
AGTGGCAGCTATATGGGCAG+TGG 0.597675 1.1:+55629916 MS.gene004746:CDS
AGAACCCTATCAAGAACAGA+AGG 0.599565 1.1:-55627747 None:intergenic
GATTTCATGGGATACGAATG+AGG 0.601256 1.1:+55627614 MS.gene004746:CDS
CTGCAAGGTAGTGGTGGCAG+TGG 0.601333 1.1:+55629898 MS.gene004746:CDS
CCCATAGAGCCATAGCCAGA+GGG 0.602657 1.1:-55629634 None:intergenic
CCAACAGCACCATATACACC+TGG 0.603562 1.1:-55629820 None:intergenic
GGAAACCAAAATGCATATGA+TGG 0.603835 1.1:+55629349 MS.gene004746:CDS
GGGTATGGTTCGGCTAGCAA+TGG 0.604135 1.1:+55629466 MS.gene004746:CDS
AATCAAGGTTACGGGTATGG+TGG 0.608429 1.1:+55629754 MS.gene004746:CDS
TAAGCAGAGGATCCATAAGG+TGG 0.611830 1.1:-55629424 None:intergenic
CCACCACTTGGAGCACCCCA+AGG 0.612791 1.1:-55629673 None:intergenic
CACCTCCAGCACCACCCATA+CGG 0.615756 1.1:-55629282 None:intergenic
TACGGGTATGGTGGTTATGG+CGG 0.616171 1.1:+55629763 MS.gene004746:CDS
ACCACGAAACCAAAGCCTCT+AGG 0.617911 1.1:-55627714 None:intergenic
CAGCCTCAAAGTGCTGCAGG+TGG 0.620843 1.1:+55629397 MS.gene004746:CDS
CAAGAGGGCTTTCTCAAGAG+AGG 0.622387 1.1:+55628931 MS.gene004746:CDS
GCTCCTTGGGGTGCTCCAAG+TGG 0.623958 1.1:+55629670 MS.gene004746:CDS
GGTAAAGCGTGCACTCCCAA+AGG 0.624619 1.1:+55629237 MS.gene004746:CDS
ACCCATAGAGCCATAGCCAG+AGG 0.625073 1.1:-55629635 None:intergenic
GTTATGAGAGAGAAGAACAC+TGG 0.644240 1.1:+55627687 MS.gene004746:CDS
TTATTCAGGTTGATGCCAAG+AGG 0.644453 1.1:+55628915 MS.gene004746:intron
ACATGTTATTGATGGCAGAA+CGG 0.646515 1.1:+55627779 MS.gene004746:CDS
TACGAATGAGGAGAAGCTGA+AGG 0.650828 1.1:+55627626 MS.gene004746:CDS
AGGTCAATCTCCCAGTGCAG+CGG 0.652350 1.1:+55629720 MS.gene004746:CDS
AGGTCCACCATAACCAGCAG+CGG 0.653962 1.1:-55629527 None:intergenic
CTATATGGGCAGTGGCTATG+GGG 0.656547 1.1:+55629924 MS.gene004746:CDS
GCTCCAAATAGTAATGCTAG+TGG 0.658443 1.1:+55629859 MS.gene004746:CDS
AAGCAGAGGATCCATAAGGT+GGG 0.660176 1.1:-55629423 None:intergenic
CATATGCTGCACCATAACCA+AGG 0.663627 1.1:-55629489 None:intergenic
AGTGAACTGCAAGGTAGTGG+TGG 0.666951 1.1:+55629892 MS.gene004746:CDS
CAAAATACTGGACGACCACG+AGG 0.670177 1.1:+55629127 MS.gene004746:CDS
GCAGCATATGGAAGTTATGG+TGG 0.673073 1.1:+55629502 MS.gene004746:CDS
CAGGGTGGTAGTGAACTGCA+AGG 0.689901 1.1:+55629883 MS.gene004746:CDS
GGTGCAAATAGCCGTATGGG+TGG 0.691605 1.1:+55629271 MS.gene004746:CDS
AGTAATGCTAGTGGTCAGGG+TGG 0.707479 1.1:+55629868 MS.gene004746:CDS
AAGAACACTGGTAAACCTAG+AGG 0.711338 1.1:+55627699 MS.gene004746:CDS
GTAATAAACCCAAATCCTCG+TGG 0.717165 1.1:-55629142 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTTTTTTGTTTAAAAATT+TGG + chr1.1:55627885-55627904 MS.gene004746:intron 10.0%
!!! TCTGTTTCATTTAATATTTT+CGG - chr1.1:55628595-55628614 None:intergenic 15.0%
!!! TTTGTTTTGTTTAAAGATTA+AGG + chr1.1:55627963-55627982 MS.gene004746:intron 15.0%
!! AAGACATTTCATGATTTAAA+TGG + chr1.1:55629202-55629221 MS.gene004746:CDS 20.0%
!! AGGATTTAAATAGATTGTAT+CGG + chr1.1:55628443-55628462 MS.gene004746:intron 20.0%
!!! AGATTATTTATTCCTGTTTT+TGG + chr1.1:55627921-55627940 MS.gene004746:intron 20.0%
!!! ATGTTGTAATTTTGTTATTC+AGG + chr1.1:55628901-55628920 MS.gene004746:intron 20.0%
!!! GTTTTCATTGTAATTTTTGT+GGG + chr1.1:55628015-55628034 MS.gene004746:intron 20.0%
!!! TTTGTTTTGTTCAATTGTAA+AGG + chr1.1:55628043-55628062 MS.gene004746:intron 20.0%
! AAAGTATAACGTTTCACTTT+GGG + chr1.1:55628474-55628493 MS.gene004746:intron 25.0%
! AAATTACAACATTGCTAGTT+AGG - chr1.1:55628893-55628912 None:intergenic 25.0%
! AAGATTAAATGTTGCATCAT+TGG + chr1.1:55628322-55628341 MS.gene004746:intron 25.0%
! AGAACCAAAAAGATATTTGT+TGG + chr1.1:55629016-55629035 MS.gene004746:CDS 25.0%
! GCTTTATATATGCAATAAGA+AGG - chr1.1:55628573-55628592 None:intergenic 25.0%
! TAAAGTATAACGTTTCACTT+TGG + chr1.1:55628473-55628492 MS.gene004746:intron 25.0%
! TATTGTGTAATAGAATTGAG+CGG + chr1.1:55628243-55628262 MS.gene004746:intron 25.0%
! TTTAAATGGTAAACAAGTAG+AGG + chr1.1:55629216-55629235 MS.gene004746:CDS 25.0%
!! AAGTTTTTACAGCAAACAAA+AGG - chr1.1:55628289-55628308 None:intergenic 25.0%
!! ATATTTTTCCATTGTGGAAT+AGG + chr1.1:55628390-55628409 MS.gene004746:intron 25.0%
!! ATGCAACATTTAATCTTTTC+AGG - chr1.1:55628319-55628338 None:intergenic 25.0%
!! GGTTTTCATTGTAATTTTTG+TGG + chr1.1:55628014-55628033 MS.gene004746:intron 25.0%
!!! AGATTAAGGCTTTAATTTTG+AGG + chr1.1:55627977-55627996 MS.gene004746:intron 25.0%
!!! ATTAAGGCTTTAATTTTGAG+GGG + chr1.1:55627979-55627998 MS.gene004746:intron 25.0%
!!! GAGACTAATTAATTTGTTCA+TGG + chr1.1:55628169-55628188 MS.gene004746:intron 25.0%
!!! GATTAAGGCTTTAATTTTGA+GGG + chr1.1:55627978-55627997 MS.gene004746:intron 25.0%
!!! TAATGGATATTTTTCCATTG+TGG + chr1.1:55628384-55628403 MS.gene004746:intron 25.0%
!!! TTATTTTTCCATTGTGGAAT+AGG + chr1.1:55628356-55628375 MS.gene004746:intron 25.0%
AAGCTACATATGTTTATGAC+AGG + chr1.1:55628749-55628768 MS.gene004746:intron 30.0%
ATAACCCTAACATAGGTAAA+AGG - chr1.1:55627852-55627871 None:intergenic 30.0%
GAAGACAAACATGTTATTGA+TGG + chr1.1:55627771-55627790 MS.gene004746:CDS 30.0%
GTGGAAGTGATAATTCTTAT+GGG + chr1.1:55629794-55629813 MS.gene004746:CDS 30.0%
TAACCCTAACATAGGTAAAA+GGG - chr1.1:55627851-55627870 None:intergenic 30.0%
TATGCAATAAGAAGGATTTC+AGG - chr1.1:55628565-55628584 None:intergenic 30.0%
TTAGGCTTATAATCGATAGT+GGG - chr1.1:55628875-55628894 None:intergenic 30.0%
TTAGTATACCTATTCCACAA+TGG - chr1.1:55628367-55628386 None:intergenic 30.0%
TTGTGGAATAGGTATACTAA+TGG + chr1.1:55628367-55628386 MS.gene004746:intron 30.0%
! ACCAAAAAGATATTTGTTGG+AGG + chr1.1:55629019-55629038 MS.gene004746:CDS 30.0%
! ATACCCTTTTACCTATGTTA+GGG + chr1.1:55627845-55627864 MS.gene004746:intron 30.0%
! CCAAAAAGATATTTGTTGGA+GGG + chr1.1:55629020-55629039 MS.gene004746:CDS 30.0%
! TATACCCTTTTACCTATGTT+AGG + chr1.1:55627844-55627863 MS.gene004746:intron 30.0%
! TCATTGTAATTTTTGTGGGT+GGG + chr1.1:55628019-55628038 MS.gene004746:intron 30.0%
! TTCATTGTAATTTTTGTGGG+TGG + chr1.1:55628018-55628037 MS.gene004746:intron 30.0%
! TTTTATGAGCTGTTTATCGA+TGG + chr1.1:55628109-55628128 MS.gene004746:intron 30.0%
!! GGTACATTATTTTTCCATTG+TGG + chr1.1:55628350-55628369 MS.gene004746:intron 30.0%
!! GTTTATTACTTTTGATACCG+AGG + chr1.1:55629156-55629175 MS.gene004746:CDS 30.0%
!! TTAAGGCTTTAATTTTGAGG+GGG + chr1.1:55627980-55627999 MS.gene004746:intron 30.0%
AAAATTCCGTCAGTACTTTG+AGG + chr1.1:55629066-55629085 MS.gene004746:CDS 35.0%
AAATAGTAATGCTAGTGGTC+AGG + chr1.1:55629864-55629883 MS.gene004746:CDS 35.0%
AATAGTAATGCTAGTGGTCA+GGG + chr1.1:55629865-55629884 MS.gene004746:CDS 35.0%
ACAAATGGAAATTCTGGGTA+TGG + chr1.1:55629949-55629968 MS.gene004746:CDS 35.0%
AGAAGGATTTCAGGAAAACA+AGG - chr1.1:55628556-55628575 None:intergenic 35.0%
AGATCCTTCTGTTCTTGATA+GGG + chr1.1:55627743-55627762 MS.gene004746:CDS 35.0%
CATTCACATAACCCTAACAT+AGG - chr1.1:55627859-55627878 None:intergenic 35.0%
CTCAAGCATCTGGTAATTAT+GGG + chr1.1:55629998-55630017 MS.gene004746:CDS 35.0%
GATAATTCTTATGGGAATCC+AGG + chr1.1:55629802-55629821 MS.gene004746:CDS 35.0%
GGAAACCAAAATGCATATGA+TGG + chr1.1:55629349-55629368 MS.gene004746:CDS 35.0%
GGTGGAAGTGATAATTCTTA+TGG + chr1.1:55629793-55629812 MS.gene004746:CDS 35.0%
GTCATGTATGACCAAAATAC+TGG + chr1.1:55629115-55629134 MS.gene004746:CDS 35.0%
GTTAGGCTTATAATCGATAG+TGG - chr1.1:55628876-55628895 None:intergenic 35.0%
TCCAATTCACAACCAAAAAC+AGG - chr1.1:55627936-55627955 None:intergenic 35.0%
TGACCACTAGCATTACTATT+TGG - chr1.1:55629865-55629884 None:intergenic 35.0%
TTTACAGCAAACAAAAGGCA+GGG - chr1.1:55628284-55628303 None:intergenic 35.0%
! AACGACCATCATATGCATTT+TGG - chr1.1:55629357-55629376 None:intergenic 35.0%
! AATGTTGCATCATTGGTTGT+AGG + chr1.1:55628329-55628348 MS.gene004746:intron 35.0%
! AATTTTTCTTCAGCCAGAGT+GGG - chr1.1:55629052-55629071 None:intergenic 35.0%
! ACATGTTATTGATGGCAGAA+CGG + chr1.1:55627779-55627798 MS.gene004746:CDS 35.0%
! CATTGTAATTTTTGTGGGTG+GGG + chr1.1:55628020-55628039 MS.gene004746:intron 35.0%
! CCCTCCAACAAATATCTTTT+TGG - chr1.1:55629023-55629042 None:intergenic 35.0%
! GATCAAGGAAAGCTTTTCAT+CGG + chr1.1:55627588-55627607 MS.gene004746:CDS 35.0%
! TTTTACAGCAAACAAAAGGC+AGG - chr1.1:55628285-55628304 None:intergenic 35.0%
!! AAGGAGCATTTCAGCAATTA+TGG + chr1.1:55627645-55627664 MS.gene004746:CDS 35.0%
!! TAAGGCTTTAATTTTGAGGG+GGG + chr1.1:55627981-55628000 MS.gene004746:intron 35.0%
!! TATTACTTTTGATACCGAGG+AGG + chr1.1:55629159-55629178 MS.gene004746:CDS 35.0%
!! TTATAATCGATAGTGGGAAC+TGG - chr1.1:55628869-55628888 None:intergenic 35.0%
!!! TCCTGTTTTTGGTTGTGAAT+TGG + chr1.1:55627932-55627951 MS.gene004746:intron 35.0%
!!! TGTTTTTGGTTGTGAATTGG+AGG + chr1.1:55627935-55627954 MS.gene004746:intron 35.0%
AAGAACACTGGTAAACCTAG+AGG + chr1.1:55627699-55627718 MS.gene004746:CDS 40.0%
AAGCAGCATTAGGGACATTT+GGG - chr1.1:55629573-55629592 None:intergenic 40.0%
ACTGGAAGTAAAGCAAACAC+AGG - chr1.1:55628851-55628870 None:intergenic 40.0%
AGAACCCTATCAAGAACAGA+AGG - chr1.1:55627750-55627769 None:intergenic 40.0%
AGATCTGGAAACTCCAATTC+TGG + chr1.1:55628977-55628996 MS.gene004746:CDS 40.0%
AGGAGATACCTATTCCACAA+TGG - chr1.1:55628401-55628420 None:intergenic 40.0%
ATAGGTATCTCCTTGGTTGT+AGG + chr1.1:55628408-55628427 MS.gene004746:intron 40.0%
ATGGTCGTTCAGATTCTAGT+AGG + chr1.1:55629368-55629387 MS.gene004746:CDS 40.0%
ATTTCCACCATTCCCAGAAT+TGG - chr1.1:55628993-55629012 None:intergenic 40.0%
ATTTCTGTCTCTTCGAGATC+TGG + chr1.1:55628962-55628981 MS.gene004746:CDS 40.0%
CACTAATGTACCTACAACCA+AGG - chr1.1:55628421-55628440 None:intergenic 40.0%
CAGATCCTTCTGTTCTTGAT+AGG + chr1.1:55627742-55627761 MS.gene004746:CDS 40.0%
CTGGAAGTAAAGCAAACACA+GGG - chr1.1:55628850-55628869 None:intergenic 40.0%
GATATGGGAATCAAGGTTAC+GGG + chr1.1:55629746-55629765 MS.gene004746:CDS 40.0%
GATCTCGAAGAGACAGAAAT+CGG - chr1.1:55628962-55628981 None:intergenic 40.0%
GATCTGGAAACTCCAATTCT+GGG + chr1.1:55628978-55628997 MS.gene004746:CDS 40.0%
GATTTCATGGGATACGAATG+AGG + chr1.1:55627614-55627633 MS.gene004746:CDS 40.0%
GCTCAAGCATCTGGTAATTA+TGG + chr1.1:55629997-55630016 MS.gene004746:CDS 40.0%
GCTCCAAATAGTAATGCTAG+TGG + chr1.1:55629859-55629878 MS.gene004746:CDS 40.0%
GGATATGGGAATCAAGGTTA+CGG + chr1.1:55629745-55629764 MS.gene004746:CDS 40.0%
GGGACACAAATGGAAATTCT+GGG + chr1.1:55629944-55629963 MS.gene004746:CDS 40.0%
GTAATAAACCCAAATCCTCG+TGG - chr1.1:55629145-55629164 None:intergenic 40.0%
GTTATGAGAGAGAAGAACAC+TGG + chr1.1:55627687-55627706 MS.gene004746:CDS 40.0%
GTTGTAGGTACATTAGTGAC+AGG + chr1.1:55628423-55628442 MS.gene004746:intron 40.0%
TAAGCAGCATTAGGGACATT+TGG - chr1.1:55629574-55629593 None:intergenic 40.0%
TATGGGAATCCAGGTGTATA+TGG + chr1.1:55629811-55629830 MS.gene004746:CDS 40.0%
TGTAATAGAATTGAGCGGTG+CGG + chr1.1:55628248-55628267 MS.gene004746:intron 40.0%
TTACAGCAAACAAAAGGCAG+GGG - chr1.1:55628283-55628302 None:intergenic 40.0%
TTGTGGAATAGGTATCTCCT+TGG + chr1.1:55628401-55628420 MS.gene004746:intron 40.0%
TTTCATCGGTGGGATTTCAT+GGG + chr1.1:55627602-55627621 MS.gene004746:CDS 40.0%
TTTGGTTGTGAATTGGAGGT+GGG + chr1.1:55627939-55627958 MS.gene004746:intron 40.0%
! AAGGAAAGCTTTTCATCGGT+GGG + chr1.1:55627592-55627611 MS.gene004746:CDS 40.0%
! ACACAACAGATCTAGCTTCA+AGG - chr1.1:55628688-55628707 None:intergenic 40.0%
! CACTTTGGGAGAAGATACAT+TGG + chr1.1:55628488-55628507 MS.gene004746:intron 40.0%
! GAATTTTTCTTCAGCCAGAG+TGG - chr1.1:55629053-55629072 None:intergenic 40.0%
! TTTTCATCGGTGGGATTTCA+TGG + chr1.1:55627601-55627620 MS.gene004746:CDS 40.0%
!! CATAAGCCTCAAAGTACTGA+CGG - chr1.1:55629075-55629094 None:intergenic 40.0%
!! TATTCAGGTTGATGCCAAGA+GGG + chr1.1:55628916-55628935 MS.gene004746:intron 40.0%
!! TTATTCAGGTTGATGCCAAG+AGG + chr1.1:55628915-55628934 MS.gene004746:intron 40.0%
!! TTTTGGTTGTGAATTGGAGG+TGG + chr1.1:55627938-55627957 MS.gene004746:intron 40.0%
!!! GATTGCGTGTTTGGTTTTCT+AGG + chr1.1:55628135-55628154 MS.gene004746:intron 40.0%
AAGCAGAGGATCCATAAGGT+GGG - chr1.1:55629426-55629445 None:intergenic 45.0%
AATCAAGGTTACGGGTATGG+TGG + chr1.1:55629754-55629773 MS.gene004746:CDS 45.0%
ACTGGTAAACCTAGAGGCTT+TGG + chr1.1:55627705-55627724 MS.gene004746:CDS 45.0%
AGTAAAGCAAACACAGGGTC+TGG - chr1.1:55628845-55628864 None:intergenic 45.0%
ATGGGTGGTTATCAAGGGTA+TGG + chr1.1:55629316-55629335 MS.gene004746:CDS 45.0%
CACCAGCATAAGCAGCATTA+GGG - chr1.1:55629582-55629601 None:intergenic 45.0%
CATATGCTGCACCATAACCA+AGG - chr1.1:55629492-55629511 None:intergenic 45.0%
CCTTATGGATCCTCTGCTTA+CGG + chr1.1:55629427-55629446 MS.gene004746:CDS 45.0%
CTTGGTTATGGTGCAGCATA+TGG + chr1.1:55629490-55629509 MS.gene004746:CDS 45.0%
GCAGCATATGGAAGTTATGG+TGG + chr1.1:55629502-55629521 MS.gene004746:CDS 45.0%
GGGGACACAAATGGAAATTC+TGG + chr1.1:55629943-55629962 MS.gene004746:CDS 45.0%
GGTAATTATGGGACTCCTCA+GGG + chr1.1:55630009-55630028 MS.gene004746:CDS 45.0%
GGTGCAGCATATGGAAGTTA+TGG + chr1.1:55629499-55629518 MS.gene004746:CDS 45.0%
GTAAAGCAAACACAGGGTCT+GGG - chr1.1:55628844-55628863 None:intergenic 45.0%
TAAGCAGAGGATCCATAAGG+TGG - chr1.1:55629427-55629446 None:intergenic 45.0%
TACGAATGAGGAGAAGCTGA+AGG + chr1.1:55627626-55627645 MS.gene004746:CDS 45.0%
TCGAAGAGACAGAAATCGGT+TGG - chr1.1:55628958-55628977 None:intergenic 45.0%
TGCTGGATATGGGTATGGTT+CGG + chr1.1:55629456-55629475 MS.gene004746:CDS 45.0%
TGGTAATTATGGGACTCCTC+AGG + chr1.1:55630008-55630027 MS.gene004746:CDS 45.0%
! AACTCCAATTCTGGGAATGG+TGG + chr1.1:55628986-55629005 MS.gene004746:CDS 45.0%
! CAAGGAAAGCTTTTCATCGG+TGG + chr1.1:55627591-55627610 MS.gene004746:CDS 45.0%
! GGAAACTCCAATTCTGGGAA+TGG + chr1.1:55628983-55629002 MS.gene004746:CDS 45.0%
! GTTATTGATGGCAGAACGGT+CGG + chr1.1:55627783-55627802 MS.gene004746:intron 45.0%
! TATCAAGGGTATGGAGCTTC+TGG + chr1.1:55629325-55629344 MS.gene004746:CDS 45.0%
!! CGATGGATTGATTGCGTGTT+TGG + chr1.1:55628126-55628145 MS.gene004746:intron 45.0%
!! CGTCAGTACTTTGAGGCTTA+TGG + chr1.1:55629073-55629092 MS.gene004746:CDS 45.0%
!! GTGTATATGGTGCTGTTGGT+GGG + chr1.1:55629824-55629843 MS.gene004746:CDS 45.0%
AACCCTATCAACTGCCTCCT+CGG - chr1.1:55629176-55629195 None:intergenic 50.0%
AATCCACCTGCAGCACTTTG+AGG - chr1.1:55629403-55629422 None:intergenic 50.0%
ACCACGAAACCAAAGCCTCT+AGG - chr1.1:55627717-55627736 None:intergenic 50.0%
ACGGCTATTTGCACCAGGAT+TGG - chr1.1:55629266-55629285 None:intergenic 50.0%
AGCTATATGGGCAGTGGCTA+TGG + chr1.1:55629922-55629941 MS.gene004746:CDS 50.0%
AGTAATGCTAGTGGTCAGGG+TGG + chr1.1:55629868-55629887 MS.gene004746:CDS 50.0%
AGTGGCTATGGGGACACAAA+TGG + chr1.1:55629934-55629953 MS.gene004746:CDS 50.0%
ATACCGAGGAGGCAGTTGAT+AGG + chr1.1:55629170-55629189 MS.gene004746:CDS 50.0%
ATGGGACTCCTCAGGGAAAT+GGG + chr1.1:55630016-55630035 MS.gene004746:CDS 50.0%
CAAAATACTGGACGACCACG+AGG + chr1.1:55629127-55629146 MS.gene004746:CDS 50.0%
CAAGAGGGCTTTCTCAAGAG+AGG + chr1.1:55628931-55628950 MS.gene004746:CDS 50.0%
CCAACAGCACCATATACACC+TGG - chr1.1:55629823-55629842 None:intergenic 50.0%
CCACCAGCATAAGCAGCATT+AGG - chr1.1:55629583-55629602 None:intergenic 50.0%
CCGTAAGCAGAGGATCCATA+AGG - chr1.1:55629430-55629449 None:intergenic 50.0%
CCTGGTGCAAATAGCCGTAT+GGG + chr1.1:55629268-55629287 MS.gene004746:CDS 50.0%
CTATATGGGCAGTGGCTATG+GGG + chr1.1:55629924-55629943 MS.gene004746:CDS 50.0%
CTCTCTTGAGAAAGCCCTCT+TGG - chr1.1:55628933-55628952 None:intergenic 50.0%
CTGGGTATGGAAATGCAGCT+TGG + chr1.1:55629962-55629981 MS.gene004746:CDS 50.0%
GACCTGCTGCTGCAACATAT+GGG + chr1.1:55629545-55629564 MS.gene004746:CDS 50.0%
GCGGAATGGGTGGTTATCAA+GGG + chr1.1:55629311-55629330 MS.gene004746:CDS 50.0%
GCTATATGGGCAGTGGCTAT+GGG + chr1.1:55629923-55629942 MS.gene004746:CDS 50.0%
GGGAATCAAGGTTACGGGTA+TGG + chr1.1:55629751-55629770 MS.gene004746:CDS 50.0%
GGTAGTGAACTGCAAGGTAG+TGG + chr1.1:55629889-55629908 MS.gene004746:CDS 50.0%
GGTTACGGGTATGGTGGTTA+TGG + chr1.1:55629760-55629779 MS.gene004746:CDS 50.0%
TACGGGTATGGTGGTTATGG+CGG + chr1.1:55629763-55629782 MS.gene004746:CDS 50.0%
TATGGGACTCCTCAGGGAAA+TGG + chr1.1:55630015-55630034 MS.gene004746:CDS 50.0%
TCCTGGTGCAAATAGCCGTA+TGG + chr1.1:55629267-55629286 MS.gene004746:CDS 50.0%
TCTGAACAGGCTCAAGCATC+TGG + chr1.1:55629988-55630007 MS.gene004746:CDS 50.0%
TGCAGCTTGGAGATCTGAAC+AGG + chr1.1:55629975-55629994 MS.gene004746:CDS 50.0%
TTACGGTAACGCTGCTCCTT+GGG + chr1.1:55629657-55629676 MS.gene004746:CDS 50.0%
TTCCCATATGTTGCAGCAGC+AGG - chr1.1:55629550-55629569 None:intergenic 50.0%
! AATGCTGCTTATGCTGGTGG+TGG + chr1.1:55629583-55629602 MS.gene004746:CDS 50.0%
! ACCTAGAGGCTTTGGTTTCG+TGG + chr1.1:55627713-55627732 MS.gene004746:CDS 50.0%
! AGTGAACTGCAAGGTAGTGG+TGG + chr1.1:55629892-55629911 MS.gene004746:CDS 50.0%
! CACCAGGATTGGCATCCTTT+GGG - chr1.1:55629255-55629274 None:intergenic 50.0%
! CCTAATGCTGCTTATGCTGG+TGG + chr1.1:55629580-55629599 MS.gene004746:CDS 50.0%
! CTCGTGGTCGTCCAGTATTT+TGG - chr1.1:55629129-55629148 None:intergenic 50.0%
! GCTAGCAATGGCCTTGGTTA+TGG + chr1.1:55629478-55629497 MS.gene004746:CDS 50.0%
! GGCTATGGCTCTATGGGTTA+CGG + chr1.1:55629640-55629659 MS.gene004746:CDS 50.0%
! GTCCCTAATGCTGCTTATGC+TGG + chr1.1:55629577-55629596 MS.gene004746:CDS 50.0%
! TACCGAGGAGGCAGTTGATA+GGG + chr1.1:55629171-55629190 MS.gene004746:CDS 50.0%
! TTTGAGGGGGGTGTGTTTAG+TGG + chr1.1:55627993-55628012 MS.gene004746:intron 50.0%
! TTTTCTTCAGCCAGAGTGGG+AGG - chr1.1:55629049-55629068 None:intergenic 50.0%
!! CCAGGTGTATATGGTGCTGT+TGG + chr1.1:55629820-55629839 MS.gene004746:CDS 50.0%
!! GGTGTATATGGTGCTGTTGG+TGG + chr1.1:55629823-55629842 MS.gene004746:CDS 50.0%
AAGGAGTTCATGGCCTGCTC+AGG + chr1.1:55629609-55629628 MS.gene004746:CDS 55.0%
AATAGCCGTATGGGTGGTGC+TGG + chr1.1:55629277-55629296 MS.gene004746:CDS 55.0%
AATGGGGGGCAAGCTGGTTA+TGG + chr1.1:55630033-55630052 MS.gene004746:CDS 55.0%
ACCCATAGAGCCATAGCCAG+AGG - chr1.1:55629638-55629657 None:intergenic 55.0%
ACTGGACGACCACGAGGATT+TGG + chr1.1:55629133-55629152 MS.gene004746:CDS 55.0%
AGGTCAATCTCCCAGTGCAG+CGG + chr1.1:55629720-55629739 MS.gene004746:CDS 55.0%
AGGTCCACCATAACCAGCAG+CGG - chr1.1:55629530-55629549 None:intergenic 55.0%
AGTGGCAGCTATATGGGCAG+TGG + chr1.1:55629916-55629935 MS.gene004746:CDS 55.0%
CCCATACGGCTATTTGCACC+AGG - chr1.1:55629271-55629290 None:intergenic 55.0%
CCCATAGAGCCATAGCCAGA+GGG - chr1.1:55629637-55629656 None:intergenic 55.0%
CTCCCAAAGGATGCCAATCC+TGG + chr1.1:55629250-55629269 MS.gene004746:CDS 55.0%
CTGGACGACCACGAGGATTT+GGG + chr1.1:55629134-55629153 MS.gene004746:CDS 55.0%
CTGTTGGGCTTGTCGAGACT+GGG - chr1.1:55630076-55630095 None:intergenic 55.0%
GAGCAGGCCATGAACTCCTT+GGG - chr1.1:55629609-55629628 None:intergenic 55.0%
GCGGCTGGATATGGGAATCA+AGG + chr1.1:55629739-55629758 MS.gene004746:CDS 55.0%
GCTGCTGCTGGATATGGGTA+TGG + chr1.1:55629451-55629470 MS.gene004746:CDS 55.0%
GGACCTGCTGCTGCAACATA+TGG + chr1.1:55629544-55629563 MS.gene004746:CDS 55.0%
GGCGGAATGGGTGGTTATCA+AGG + chr1.1:55629310-55629329 MS.gene004746:CDS 55.0%
GGTAAAGCGTGCACTCCCAA+AGG + chr1.1:55629237-55629256 MS.gene004746:CDS 55.0%
GGTGCAAATAGCCGTATGGG+TGG + chr1.1:55629271-55629290 MS.gene004746:CDS 55.0%
GGTGGCAGTGGCAGCTATAT+GGG + chr1.1:55629910-55629929 MS.gene004746:CDS 55.0%
GTTACGGTAACGCTGCTCCT+TGG + chr1.1:55629656-55629675 MS.gene004746:CDS 55.0%
TACGGTAACGCTGCTCCTTG+GGG + chr1.1:55629658-55629677 MS.gene004746:CDS 55.0%
TGAGCAGGCCATGAACTCCT+TGG - chr1.1:55629610-55629629 None:intergenic 55.0%
TGGGACTCCTCAGGGAAATG+GGG + chr1.1:55630017-55630036 MS.gene004746:CDS 55.0%
TGGTGGCAGTGGCAGCTATA+TGG + chr1.1:55629909-55629928 MS.gene004746:CDS 55.0%
! CAAGGGTATGGAGCTTCTGG+TGG + chr1.1:55629328-55629347 MS.gene004746:CDS 55.0%
! CAGGGTGGTAGTGAACTGCA+AGG + chr1.1:55629883-55629902 MS.gene004746:CDS 55.0%
! CCCTCTGGCTATGGCTCTAT+GGG + chr1.1:55629634-55629653 MS.gene004746:CDS 55.0%
! GCACCAGGATTGGCATCCTT+TGG - chr1.1:55629256-55629275 None:intergenic 55.0%
! GCAGGTGGATTCCCACCTTA+TGG + chr1.1:55629412-55629431 MS.gene004746:CDS 55.0%
! GGGTATGGTTCGGCTAGCAA+TGG + chr1.1:55629466-55629485 MS.gene004746:CDS 55.0%
! TCCCTCTGGCTATGGCTCTA+TGG + chr1.1:55629633-55629652 MS.gene004746:CDS 55.0%
!! ACGGTGCTGCTGCTGGATAT+GGG + chr1.1:55629446-55629465 MS.gene004746:CDS 55.0%
!! ATGCAGCCTCAAAGTGCTGC+AGG + chr1.1:55629394-55629413 MS.gene004746:CDS 55.0%
!! GCTGGTTATGGTGGTGGCTA+TGG + chr1.1:55630045-55630064 MS.gene004746:CDS 55.0%
!! GGTTATGGTGGTGGCTATGG+TGG + chr1.1:55630048-55630067 MS.gene004746:CDS 55.0%
!! TACGGTGCTGCTGCTGGATA+TGG + chr1.1:55629445-55629464 MS.gene004746:CDS 55.0%
AGCAGCAGCACCGTAAGCAG+AGG - chr1.1:55629440-55629459 None:intergenic 60.0%
CACCTCCAGCACCACCCATA+CGG - chr1.1:55629285-55629304 None:intergenic 60.0%
CCAGATCCAGCACCACCACT+TGG - chr1.1:55629688-55629707 None:intergenic 60.0%
CCAGTGCAGCGGCTGGATAT+GGG + chr1.1:55629731-55629750 MS.gene004746:CDS 60.0%
CCATATCCAGCCGCTGCACT+GGG - chr1.1:55629733-55629752 None:intergenic 60.0%
GCTGTTGGGCTTGTCGAGAC+TGG - chr1.1:55630077-55630096 None:intergenic 60.0%
GGACTCCTCAGGGAAATGGG+GGG + chr1.1:55630019-55630038 MS.gene004746:CDS 60.0%
GGATCTGGTGCAGCAACTGC+AGG + chr1.1:55629700-55629719 MS.gene004746:CDS 60.0%
GGGACTCCTCAGGGAAATGG+GGG + chr1.1:55630018-55630037 MS.gene004746:CDS 60.0%
GGGCAAGCTGGTTATGGTGG+TGG + chr1.1:55630039-55630058 MS.gene004746:CDS 60.0%
GGGTATGGTGGTTATGGCGG+CGG + chr1.1:55629766-55629785 MS.gene004746:CDS 60.0%
GGTATGGTGGTTATGGCGGC+GGG + chr1.1:55629767-55629786 MS.gene004746:CDS 60.0%
GGTTCGGCTAGCAATGGCCT+TGG + chr1.1:55629472-55629491 MS.gene004746:CDS 60.0%
GTGGTGGCCCAAGGAGTTCA+TGG + chr1.1:55629599-55629618 MS.gene004746:CDS 60.0%
! CCAAGTGGTGGTGCTGGATC+TGG + chr1.1:55629685-55629704 MS.gene004746:CDS 60.0%
! CTGCAAGGTAGTGGTGGCAG+TGG + chr1.1:55629898-55629917 MS.gene004746:CDS 60.0%
! GTGCTGTTGGTGGGCGTACT+GGG + chr1.1:55629833-55629852 MS.gene004746:CDS 60.0%
!! AGTTATGGTGGTGCCGCTGC+TGG + chr1.1:55629514-55629533 MS.gene004746:CDS 60.0%
!! CAGCCTCAAAGTGCTGCAGG+TGG + chr1.1:55629397-55629416 MS.gene004746:CDS 60.0%
!! CTTATGCTGGTGGTGGCCCA+AGG + chr1.1:55629590-55629609 MS.gene004746:CDS 60.0%
!! GGAGGTGGTAGTGGCGGAAT+GGG + chr1.1:55629298-55629317 MS.gene004746:CDS 60.0%
!! TCTGCTTACGGTGCTGCTGC+TGG + chr1.1:55629439-55629458 MS.gene004746:CDS 60.0%
!! TGGAGGTGGTAGTGGCGGAA+TGG + chr1.1:55629297-55629316 MS.gene004746:CDS 60.0%
CAATCTCCCAGTGCAGCGGC+TGG + chr1.1:55629724-55629743 MS.gene004746:CDS 65.0%
CAGGGAAATGGGGGGCAAGC+TGG + chr1.1:55630027-55630046 MS.gene004746:CDS 65.0%
CCCAGTGCAGCGGCTGGATA+TGG + chr1.1:55629730-55629749 MS.gene004746:CDS 65.0%
CCCATATCCAGCCGCTGCAC+TGG - chr1.1:55629734-55629753 None:intergenic 65.0%
GCTCAGGCTCCCTCTGGCTA+TGG + chr1.1:55629625-55629644 MS.gene004746:CDS 65.0%
GCTTGCCCCCCATTTCCCTG+AGG - chr1.1:55630027-55630046 None:intergenic 65.0%
GGGGGGCAAGCTGGTTATGG+TGG + chr1.1:55630036-55630055 MS.gene004746:CDS 65.0%
GGTGGTTATGGCGGCGGGTA+TGG + chr1.1:55629772-55629791 MS.gene004746:CDS 65.0%
GGTTATGGCGGCGGGTATGG+TGG + chr1.1:55629775-55629794 MS.gene004746:CDS 65.0%
TAGCCAGAGGGAGCCTGAGC+AGG - chr1.1:55629625-55629644 None:intergenic 65.0%
TGGAGGGTTGCCTCCCACTC+TGG + chr1.1:55629036-55629055 MS.gene004746:CDS 65.0%
! AGCCGTATGGGTGGTGCTGG+AGG + chr1.1:55629280-55629299 MS.gene004746:CDS 65.0%
! CCACCACTTGGAGCACCCCA+AGG - chr1.1:55629676-55629695 None:intergenic 65.0%
! CCTTGGGGTGCTCCAAGTGG+TGG + chr1.1:55629673-55629692 MS.gene004746:CDS 65.0%
! CGTATGGGTGGTGCTGGAGG+TGG + chr1.1:55629283-55629302 MS.gene004746:CDS 65.0%
! GCTCCTTGGGGTGCTCCAAG+TGG + chr1.1:55629670-55629689 MS.gene004746:CDS 65.0%
! GGTGCTCCAAGTGGTGGTGC+TGG + chr1.1:55629679-55629698 MS.gene004746:CDS 65.0%
! GGTGGTGCTGGAGGTGGTAG+TGG + chr1.1:55629289-55629308 MS.gene004746:CDS 65.0%
!! GGTGCCGCTGCTGGTTATGG+TGG + chr1.1:55629523-55629542 MS.gene004746:CDS 65.0%
!! GGTGCTGGAGGTGGTAGTGG+CGG + chr1.1:55629292-55629311 MS.gene004746:CDS 65.0%
!! GGTGCTGTTGGTGGGCGTAC+TGG + chr1.1:55629832-55629851 MS.gene004746:CDS 65.0%
!! GGTGGTAGTGGCGGAATGGG+TGG + chr1.1:55629301-55629320 MS.gene004746:CDS 65.0%
!! GGTGGTGCCGCTGCTGGTTA+TGG + chr1.1:55629520-55629539 MS.gene004746:CDS 65.0%
TGGCCTGCTCAGGCTCCCTC+TGG + chr1.1:55629619-55629638 MS.gene004746:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 55627579 55630101 55627579 ID=MS.gene004746
chr1.1 mRNA 55627579 55630101 55627579 ID=MS.gene004746.t1;Parent=MS.gene004746
chr1.1 exon 55627579 55627800 55627579 ID=MS.gene004746.t1.exon1;Parent=MS.gene004746.t1
chr1.1 CDS 55627579 55627800 55627579 ID=cds.MS.gene004746.t1;Parent=MS.gene004746.t1
chr1.1 exon 55628923 55630101 55628923 ID=MS.gene004746.t1.exon2;Parent=MS.gene004746.t1
chr1.1 CDS 55628923 55630101 55628923 ID=cds.MS.gene004746.t1;Parent=MS.gene004746.t1
Gene Sequence

>MS.gene004746

ATGGATTCGGATCAAGGAAAGCTTTTCATCGGTGGGATTTCATGGGATACGAATGAGGAGAAGCTGAAGGAGCATTTCAGCAATTATGGTGATGTTTTGAACACTTCTGTTATGAGAGAGAAGAACACTGGTAAACCTAGAGGCTTTGGTTTCGTGGTTTTCTCAGATCCTTCTGTTCTTGATAGGGTTCTTGAAGACAAACATGTTATTGATGGCAGAACGGTCGGTTTTGTTTTTTCTTTCTCATTTTCATTCAATGTTTTTTTATACCCTTTTACCTATGTTAGGGTTATGTGAATGTTTGTGTGTTTTTTTGTTTAAAAATTTGGTCTTTTTTGTTTTAGATTATTTATTCCTGTTTTTGGTTGTGAATTGGAGGTGGGTTTTGTTTTGTTTAAAGATTAAGGCTTTAATTTTGAGGGGGGTGTGTTTAGTGGTTTTCATTGTAATTTTTGTGGGTGGGGTTTGTTTTGTTCAATTGTAAAGGCTGTTATTTACTGTGTATAGTGATTTTTTTTTTTTTTTGAAATTTTTATGAGCTGTTTATCGATGGATTGATTGCGTGTTTGGTTTTCTAGGTTTTATAGCATGAGACTAATTAATTTGTTCATGGTTTGATTTGCTTAACTTGAGATAAGTTTGTCTATAACTATTGTTAGTAGATTATTGTGTAATAGAATTGAGCGGTGCGGATGCATATTCCCCTGCCTTTTGTTTGCTGTAAAAACTTTGCTAGACCTGAAAAGATTAAATGTTGCATCATTGGTTGTAGGTACATTATTTTTCCATTGTGGAATAGGTATACTAATGGATATTTTTCCATTGTGGAATAGGTATCTCCTTGGTTGTAGGTACATTAGTGACAGGATTTAAATAGATTGTATCGGATGAAAGTAAAGTATAACGTTTCACTTTGGGAGAAGATACATTGGAATATCATTAATGTTGTTTCATGTTGTTTCAAAACAATAATACCTTGTTTTCCTGAAATCCTTCTTATTGCATATATAAAGCCGAAAATATTAAATGAAACAGAAAAAGATTTTGATACGTTGATAACTTGAAAAGCATTTAATTATATTATCGCTGAGTATGTCTGCTGACATCCTTGAAGCTAGATCTGTTGTGTCAAATATATTATGTTTTCATCTTATATGTACTGTTACTTATAAGCTACATATGTTTATGACAGGTGATACTGCTACTTATAAGCTATATATATGTAATTTGAACATTTATCTGTACTTTTAAATCTGTTGTGACCCAGACCCTGTGTTTGCTTTACTTCCAGTTCCCACTATCGATTATAAGCCTAACTAGCAATGTTGTAATTTTGTTATTCAGGTTGATGCCAAGAGGGCTTTCTCAAGAGAGGACCAACCGATTTCTGTCTCTTCGAGATCTGGAAACTCCAATTCTGGGAATGGTGGAAATATGAGAACCAAAAAGATATTTGTTGGAGGGTTGCCTCCCACTCTGGCTGAAGAAAAATTCCGTCAGTACTTTGAGGCTTATGGACATGTAACTGATGTTGTAGTCATGTATGACCAAAATACTGGACGACCACGAGGATTTGGGTTTATTACTTTTGATACCGAGGAGGCAGTTGATAGGGTTTTGCACAAGACATTTCATGATTTAAATGGTAAACAAGTAGAGGTAAAGCGTGCACTCCCAAAGGATGCCAATCCTGGTGCAAATAGCCGTATGGGTGGTGCTGGAGGTGGTAGTGGCGGAATGGGTGGTTATCAAGGGTATGGAGCTTCTGGTGGAAACCAAAATGCATATGATGGTCGTTCAGATTCTAGTAGGTATATGCAGCCTCAAAGTGCTGCAGGTGGATTCCCACCTTATGGATCCTCTGCTTACGGTGCTGCTGCTGGATATGGGTATGGTTCGGCTAGCAATGGCCTTGGTTATGGTGCAGCATATGGAAGTTATGGTGGTGCCGCTGCTGGTTATGGTGGACCTGCTGCTGCAACATATGGGAACCCAAATGTCCCTAATGCTGCTTATGCTGGTGGTGGCCCAAGGAGTTCATGGCCTGCTCAGGCTCCCTCTGGCTATGGCTCTATGGGTTACGGTAACGCTGCTCCTTGGGGTGCTCCAAGTGGTGGTGCTGGATCTGGTGCAGCAACTGCAGGTCAATCTCCCAGTGCAGCGGCTGGATATGGGAATCAAGGTTACGGGTATGGTGGTTATGGCGGCGGGTATGGTGGAAGTGATAATTCTTATGGGAATCCAGGTGTATATGGTGCTGTTGGTGGGCGTACTGGGAGTGCTCCAAATAGTAATGCTAGTGGTCAGGGTGGTAGTGAACTGCAAGGTAGTGGTGGCAGTGGCAGCTATATGGGCAGTGGCTATGGGGACACAAATGGAAATTCTGGGTATGGAAATGCAGCTTGGAGATCTGAACAGGCTCAAGCATCTGGTAATTATGGGACTCCTCAGGGAAATGGGGGGCAAGCTGGTTATGGTGGTGGCTATGGTGGCGCCCAGTCTCGACAAGCCCAACAGCAGTAA
Protein sequence

>MS.gene004746.t1

MDSDQGKLFIGGISWDTNEEKLKEHFSNYGDVLNTSVMREKNTGKPRGFGFVVFSDPSVLDRVLEDKHVIDGRTVDAKRAFSREDQPISVSSRSGNSNSGNGGNMRTKKIFVGGLPPTLAEEKFRQYFEAYGHVTDVVVMYDQNTGRPRGFGFITFDTEEAVDRVLHKTFHDLNGKQVEVKRALPKDANPGANSRMGGAGGGSGGMGGYQGYGASGGNQNAYDGRSDSSRYMQPQSAAGGFPPYGSSAYGAAAGYGYGSASNGLGYGAAYGSYGGAAAGYGGPAAATYGNPNVPNAAYAGGGPRSSWPAQAPSGYGSMGYGNAAPWGAPSGGAGSGAATAGQSPSAAAGYGNQGYGYGGYGGGYGGSDNSYGNPGVYGAVGGRTGSAPNSNASGQGGSELQGSGGSGSYMGSGYGDTNGNSGYGNAAWRSEQAQASGNYGTPQGNGGQAGYGGGYGGAQSRQAQQQ