AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene004748

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004748.t1 MTR_1g073690 97.872 470 5 2 1 466 1 469 0.0 884
MS.gene004748.t1 MTR_3g055990 49.839 311 115 10 1 284 1 297 5.71e-87 275
MS.gene004748.t1 MTR_3g055990 49.839 311 115 10 1 284 1 297 6.37e-87 274
MS.gene004748.t1 MTR_2g026180 62.567 187 70 0 4 190 2 188 9.80e-85 269
MS.gene004748.t1 MTR_5g097580 62.827 191 69 1 1 191 1 189 3.72e-82 262
MS.gene004748.t1 MTR_5g097580 62.827 191 69 1 1 191 1 189 3.76e-82 262
MS.gene004748.t1 MTR_3g103420 54.315 197 85 3 1 192 5 201 2.51e-66 218
MS.gene004748.t1 MTR_6g004810 43.750 208 97 5 6 209 45 236 2.70e-51 178
MS.gene004748.t1 MTR_6g004810 45.055 91 49 1 96 186 33 122 1.44e-17 84.7
MS.gene004748.t1 MTR_2g026180 61.207 116 45 0 75 190 3 118 4.04e-44 160
MS.gene004748.t1 MTR_2g026180 32.927 82 54 1 7 87 37 118 7.94e-13 70.5
MS.gene004748.t1 MTR_3g082650 37.912 182 98 3 6 186 18 185 5.69e-43 155
MS.gene004748.t1 MTR_3g082650 50.000 96 45 2 91 186 3 95 4.21e-22 97.8
MS.gene004748.t1 MTR_5g017280 34.387 253 141 5 4 247 2 238 2.37e-37 140
MS.gene004748.t1 MTR_5g017280 30.342 234 130 6 7 208 93 325 3.79e-22 98.2
MS.gene004748.t1 MTR_5g017280 34.387 253 141 5 4 247 2 238 3.71e-37 140
MS.gene004748.t1 MTR_5g017280 30.342 234 130 6 7 208 93 325 4.07e-22 98.2
MS.gene004748.t1 MTR_8g463890 30.108 186 114 2 2 184 69 241 1.06e-24 106
MS.gene004748.t1 MTR_4g088010 30.055 183 113 3 2 184 72 239 5.88e-20 91.3
MS.gene004748.t1 MTR_3g116130 40.000 80 47 1 2 80 25 104 1.30e-16 80.5
MS.gene004748.t1 MTR_3g116130 37.037 81 51 0 103 183 24 104 8.81e-11 63.2
MS.gene004748.t1 MTR_5g064120 38.750 80 48 1 2 80 12 91 8.00e-16 78.2
MS.gene004748.t1 MTR_5g088220 24.865 185 131 2 1 184 160 337 8.81e-16 80.1
MS.gene004748.t1 MTR_3g116130 40.000 80 47 1 2 80 25 104 1.06e-15 79.0
MS.gene004748.t1 MTR_4g035310 36.250 80 50 1 2 80 12 91 7.39e-15 75.1
MS.gene004748.t1 MTR_4g035310 36.250 80 50 1 2 80 12 91 8.85e-15 74.7
MS.gene004748.t1 MTR_3g092490 33.333 108 70 2 2 108 22 128 9.84e-15 74.3
MS.gene004748.t1 MTR_3g092490 33.333 108 70 2 2 108 22 128 9.88e-15 74.3
MS.gene004748.t1 MTR_7g088140 24.457 184 138 1 2 184 123 306 1.45e-14 76.3
MS.gene004748.t1 MTR_8g024520 30.496 141 81 4 2 133 21 153 1.46e-14 74.3
MS.gene004748.t1 MTR_8g024520 40.476 84 47 1 81 164 1 81 2.21e-11 64.7
MS.gene004748.t1 MTR_8g024520 30.496 141 81 4 2 133 21 153 1.49e-14 74.3
MS.gene004748.t1 MTR_8g024520 40.476 84 47 1 81 164 1 81 2.25e-11 64.7
MS.gene004748.t1 MTR_4g104470 31.447 159 97 3 3 159 119 267 1.60e-14 74.3
MS.gene004748.t1 MTR_4g104470 43.750 80 42 2 109 186 123 201 1.04e-11 66.2
MS.gene004748.t1 MTR_7g013730 44.304 79 42 1 7 83 41 119 1.62e-14 73.6
MS.gene004748.t1 MTR_7g013730 39.773 88 51 2 105 191 37 123 1.92e-11 64.7
MS.gene004748.t1 MTR_3g092490 33.333 108 70 2 2 108 22 128 2.11e-14 71.6
MS.gene004748.t1 MTR_7g117495 37.500 80 49 1 2 80 14 93 8.51e-14 71.6
MS.gene004748.t1 MTR_7g117495 37.500 80 49 1 2 80 14 93 1.16e-13 71.2
MS.gene004748.t1 MTR_7g088140 24.457 184 138 1 2 184 123 306 1.41e-13 73.2
MS.gene004748.t1 MTR_1g064230 30.808 198 117 6 7 190 85 276 2.26e-13 70.9
MS.gene004748.t1 MTR_4g085540 28.977 176 111 5 8 178 215 381 3.45e-13 72.4
MS.gene004748.t1 MTR_2g097960 30.952 168 90 4 8 166 17 167 5.28e-13 70.9
MS.gene004748.t1 MTR_3g065190 29.121 182 112 5 9 188 28 194 1.12e-12 69.7
MS.gene004748.t1 MTR_3g084040 38.961 77 47 0 104 180 32 108 1.56e-12 65.5
MS.gene004748.t1 MTR_3g080130 42.029 69 37 1 7 75 37 102 4.69e-12 63.9
MS.gene004748.t1 MTR_4g109540 42.308 78 44 1 107 183 41 118 6.52e-12 66.2
MS.gene004748.t1 MTR_4g109540 52.083 48 23 0 7 54 43 90 1.63e-11 65.1
MS.gene004748.t1 MTR_1g097440 27.778 180 109 7 8 178 211 378 9.91e-12 67.8
MS.gene004748.t1 MTR_3g014000 54.167 48 18 1 8 55 36 79 1.32e-11 62.4
MS.gene004748.t1 MTR_4g070190 34.211 76 48 1 7 80 9 84 1.70e-11 62.8
MS.gene004748.t1 MTR_4g070080 32.895 76 49 1 7 80 7 82 1.86e-11 62.0
MS.gene004748.t1 MTR_7g102730 24.419 172 125 4 2 171 185 353 2.84e-11 66.2
MS.gene004748.t1 MTR_4g070080 32.895 76 49 1 7 80 7 82 4.83e-11 61.6
MS.gene004748.t1 MTR_4g124940 25.161 310 181 12 8 294 48 329 5.94e-11 64.7
MS.gene004748.t1 MTR_3g101370 25.641 156 105 3 3 156 90 236 6.97e-11 64.3
MS.gene004748.t1 MTR_3g025880 37.349 83 49 2 108 187 44 126 7.46e-11 64.3
MS.gene004748.t1 MTR_4g070140 32.895 76 49 1 7 80 9 84 8.68e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004748.t1 AT2G33410 56.659 413 144 6 1 409 1 382 4.99e-120 357
MS.gene004748.t1 AT4G14300 58.807 352 121 6 1 345 1 335 7.24e-109 328
MS.gene004748.t1 AT4G14300 58.807 352 121 6 1 345 1 335 7.24e-109 328
MS.gene004748.t1 AT5G55550 59.361 219 70 3 1 206 1 213 2.16e-86 272
MS.gene004748.t1 AT5G55550 59.361 219 70 3 1 206 1 213 2.16e-86 272
MS.gene004748.t1 AT5G55550 59.361 219 70 3 1 206 1 213 2.16e-86 272
MS.gene004748.t1 AT5G55550 59.361 219 70 3 1 206 1 213 2.16e-86 272
MS.gene004748.t1 AT5G55550 59.361 219 70 3 1 206 1 213 2.16e-86 272
MS.gene004748.t1 AT5G55550 59.361 219 70 3 1 206 1 213 3.75e-86 272
MS.gene004748.t1 AT5G55550 59.361 219 70 3 1 206 1 213 3.75e-86 272
MS.gene004748.t1 AT5G55550 59.361 219 70 3 1 206 1 213 3.75e-86 272
MS.gene004748.t1 AT5G55550 59.361 219 70 3 1 206 1 213 3.75e-86 272
MS.gene004748.t1 AT4G26650 62.304 191 67 1 3 188 9 199 2.47e-83 264
MS.gene004748.t1 AT4G26650 62.304 191 67 1 3 188 12 202 2.68e-83 264
MS.gene004748.t1 AT3G07810 59.500 200 81 0 1 200 1 200 3.00e-81 260
MS.gene004748.t1 AT3G07810 59.500 200 81 0 1 200 1 200 3.15e-81 260
MS.gene004748.t1 AT5G55550 48.872 266 70 4 1 206 1 260 1.97e-77 250
MS.gene004748.t1 AT5G55550 48.872 266 70 4 1 206 1 260 2.33e-77 250
MS.gene004748.t1 AT5G47620 55.080 187 82 1 1 187 1 185 3.86e-72 234
MS.gene004748.t1 AT5G47620 55.080 187 82 1 1 187 1 185 3.86e-72 234
MS.gene004748.t1 AT5G47620 55.080 187 82 1 1 187 1 185 3.86e-72 234
MS.gene004748.t1 AT5G47620 49.282 209 82 2 1 187 1 207 4.49e-67 222
MS.gene004748.t1 AT1G58470 48.744 199 90 2 1 187 1 199 1.06e-57 194
MS.gene004748.t1 AT1G58470 48.744 199 90 2 1 187 1 199 1.06e-57 194
MS.gene004748.t1 AT1G17640 44.444 207 103 2 6 211 66 261 1.15e-54 187
MS.gene004748.t1 AT1G17640 44.444 207 103 2 6 211 66 261 1.15e-54 187
MS.gene004748.t1 AT1G17640 44.444 207 103 2 6 211 66 261 1.15e-54 187
MS.gene004748.t1 AT3G13224 43.617 188 85 3 6 188 19 190 5.68e-51 177
MS.gene004748.t1 AT3G13224 49.474 95 47 1 92 186 3 96 4.33e-21 94.7
MS.gene004748.t1 AT3G13224 43.316 187 85 3 7 188 11 181 9.94e-50 173
MS.gene004748.t1 AT3G13224 50.000 82 40 1 105 186 7 87 4.76e-20 91.7
MS.gene004748.t1 AT3G13224 44.311 167 73 2 6 168 19 169 1.26e-44 156
MS.gene004748.t1 AT3G13224 49.474 95 47 1 92 186 3 96 3.10e-20 89.7
MS.gene004748.t1 AT5G47620 52.381 126 57 2 63 187 2 125 1.60e-37 141
MS.gene004748.t1 AT5G47620 30.612 98 66 2 3 99 43 139 1.03e-11 66.6
MS.gene004748.t1 AT5G40490 31.727 249 140 5 6 253 42 261 7.70e-31 124
MS.gene004748.t1 AT4G36960 33.333 198 109 4 5 196 2 182 5.26e-30 120
MS.gene004748.t1 AT4G36960 25.862 232 116 4 7 187 92 318 7.13e-18 85.5
MS.gene004748.t1 AT4G36960 33.333 198 109 4 5 196 2 182 5.26e-30 120
MS.gene004748.t1 AT4G36960 25.862 232 116 4 7 187 92 318 7.13e-18 85.5
MS.gene004748.t1 AT5G40490 33.047 233 122 4 24 253 43 244 1.46e-28 117
MS.gene004748.t1 AT5G40490 47.826 69 33 2 118 186 37 102 9.31e-13 70.1
MS.gene004748.t1 AT3G15010 30.108 186 114 2 2 184 71 243 2.45e-21 96.3
MS.gene004748.t1 AT3G15010 30.108 186 114 2 2 184 71 243 2.45e-21 96.3
MS.gene004748.t1 AT1G20880 42.500 80 45 1 2 80 20 99 1.40e-17 83.2
MS.gene004748.t1 AT1G20880 42.500 80 45 1 2 80 20 99 1.40e-17 83.2
MS.gene004748.t1 AT1G20880 42.500 80 45 1 2 80 20 99 1.40e-17 83.2
MS.gene004748.t1 AT1G76460 41.250 80 46 1 2 80 20 99 2.64e-17 82.4
MS.gene004748.t1 AT1G76460 29.707 239 129 7 103 303 19 256 2.97e-12 67.4
MS.gene004748.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004748.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004748.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004748.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004748.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004748.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004748.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004748.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004748.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004748.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004748.t1 AT3G56860 28.191 188 119 4 2 177 136 319 4.06e-15 77.8
MS.gene004748.t1 AT3G54770 37.500 80 49 1 2 80 13 92 8.87e-15 74.7
MS.gene004748.t1 AT2G41060 24.832 298 193 6 2 284 124 405 8.90e-15 76.6
MS.gene004748.t1 AT2G41060 24.832 298 193 6 2 284 124 405 8.90e-15 76.6
MS.gene004748.t1 AT2G41060 24.832 298 193 6 2 284 124 405 8.90e-15 76.6
MS.gene004748.t1 AT4G39260 36.709 79 48 1 7 83 7 85 9.37e-15 70.1
MS.gene004748.t1 AT3G54770 37.500 80 49 1 2 80 13 92 9.70e-15 74.7
MS.gene004748.t1 AT2G23350 30.114 176 109 5 8 178 227 393 1.08e-14 77.0
MS.gene004748.t1 AT4G24770 29.444 180 109 5 3 179 147 311 1.10e-14 75.5
MS.gene004748.t1 AT4G24770 29.444 180 109 5 3 179 147 311 1.10e-14 75.5
MS.gene004748.t1 AT3G26420 41.026 78 45 1 109 185 8 85 5.00e-14 72.0
MS.gene004748.t1 AT1G33470 35.000 80 51 1 2 80 3 82 5.12e-14 72.0
MS.gene004748.t1 AT1G33470 35.000 80 51 1 2 80 3 82 5.34e-14 72.0
MS.gene004748.t1 AT1G33470 35.000 80 51 1 2 80 3 82 5.41e-14 72.0
MS.gene004748.t1 AT2G37220 31.053 190 117 5 7 183 92 280 1.32e-13 71.6
MS.gene004748.t1 AT3G23830 35.514 107 60 3 93 190 12 118 2.57e-13 67.4
MS.gene004748.t1 AT3G23830 36.145 83 51 1 7 87 36 118 3.95e-11 61.2
MS.gene004748.t1 AT3G23830 35.514 107 60 3 93 190 12 118 2.57e-13 67.4
MS.gene004748.t1 AT3G23830 36.145 83 51 1 7 87 36 118 3.95e-11 61.2
MS.gene004748.t1 AT5G61030 40.000 80 47 1 105 183 37 116 2.67e-13 70.9
MS.gene004748.t1 AT5G61030 37.975 79 47 1 7 83 41 119 1.51e-11 65.9
MS.gene004748.t1 AT5G61030 40.000 80 47 1 105 183 37 116 2.67e-13 70.9
MS.gene004748.t1 AT5G61030 37.975 79 47 1 7 83 41 119 1.51e-11 65.9
MS.gene004748.t1 AT3G16380 28.485 165 108 5 2 161 198 357 3.02e-13 72.4
MS.gene004748.t1 AT1G78260 35.000 80 51 1 2 80 13 92 3.02e-13 70.5
MS.gene004748.t1 AT5G04280 37.975 79 48 1 109 186 8 86 3.07e-13 70.9
MS.gene004748.t1 AT5G04280 35.526 76 47 1 7 80 8 83 7.21e-13 69.7
MS.gene004748.t1 AT1G22910 30.435 115 74 3 2 115 9 118 3.30e-13 69.7
MS.gene004748.t1 AT1G22330 35.000 80 51 1 2 80 13 92 3.56e-13 70.5
MS.gene004748.t1 AT1G22910 30.435 115 74 3 2 115 9 118 3.61e-13 69.7
MS.gene004748.t1 AT4G16280 28.037 214 115 9 7 204 46 236 3.78e-13 72.0
MS.gene004748.t1 AT4G16280 28.037 214 115 9 7 204 121 311 3.86e-13 72.4
MS.gene004748.t1 AT4G00830 25.000 152 90 3 7 156 117 246 4.09e-13 71.6
MS.gene004748.t1 AT2G36660 27.059 170 111 6 8 171 203 365 6.36e-13 71.2
MS.gene004748.t1 AT4G16280 28.037 214 115 9 7 204 121 311 6.77e-13 71.2
MS.gene004748.t1 AT4G00830 25.974 154 86 5 7 156 117 246 7.09e-13 70.9
MS.gene004748.t1 AT4G00830 25.974 154 86 5 7 156 117 246 7.09e-13 70.9
MS.gene004748.t1 AT4G00830 25.974 154 86 5 7 156 117 246 7.09e-13 70.9
MS.gene004748.t1 AT1G78260 35.000 80 51 1 2 80 13 92 7.18e-13 69.3
MS.gene004748.t1 AT2G46780 32.500 80 53 1 2 80 18 97 8.32e-13 69.7
MS.gene004748.t1 AT2G46780 35.714 84 54 0 101 184 15 98 2.51e-11 65.5
MS.gene004748.t1 AT2G46780 32.500 80 53 1 2 80 18 97 8.32e-13 69.7
MS.gene004748.t1 AT2G46780 35.714 84 54 0 101 184 15 98 2.51e-11 65.5
MS.gene004748.t1 AT4G39260 34.146 82 52 1 1 80 1 82 8.83e-13 65.5
MS.gene004748.t1 AT1G60650 40.659 91 52 2 97 186 2 91 1.70e-12 68.6
MS.gene004748.t1 AT1G60650 37.500 64 40 0 5 68 11 74 2.87e-11 64.7
MS.gene004748.t1 AT1G60650 40.659 91 52 2 97 186 2 91 1.70e-12 68.6
MS.gene004748.t1 AT1G60650 37.500 64 40 0 5 68 11 74 2.87e-11 64.7
MS.gene004748.t1 AT3G19130 28.251 223 132 7 4 214 106 312 1.75e-12 69.7
MS.gene004748.t1 AT4G39260 35.526 76 47 1 7 80 7 82 2.21e-12 65.9
MS.gene004748.t1 AT4G39260 36.364 66 42 0 1 66 1 66 3.15e-12 63.5
MS.gene004748.t1 AT4G34110 27.273 176 120 4 8 181 217 386 3.20e-12 69.3
MS.gene004748.t1 AT2G18510 27.869 183 115 4 8 188 27 194 3.29e-12 68.2
MS.gene004748.t1 AT5G50250 29.518 166 97 4 4 163 111 262 4.00e-12 67.4
MS.gene004748.t1 AT1G22910 30.435 115 74 3 2 115 9 118 4.83e-12 67.8
MS.gene004748.t1 AT1G49600 28.755 233 137 8 4 229 117 327 8.93e-12 67.4
MS.gene004748.t1 AT5G54900 26.768 198 117 5 3 193 57 233 9.82e-12 67.0
MS.gene004748.t1 AT2G21660 34.211 76 48 1 7 80 9 84 1.69e-11 62.8
MS.gene004748.t1 AT2G21660 34.211 76 48 1 7 80 9 84 2.37e-11 62.8
MS.gene004748.t1 AT4G13850 50.000 50 25 0 7 56 36 85 2.38e-11 62.0
MS.gene004748.t1 AT4G13850 50.000 50 25 0 7 56 36 85 2.89e-11 62.0
MS.gene004748.t1 AT4G13850 50.000 50 25 0 7 56 36 85 3.21e-11 62.0
MS.gene004748.t1 AT1G22760 27.879 165 93 5 5 161 135 281 4.05e-11 65.9
MS.gene004748.t1 AT1G74230 34.286 105 65 1 79 183 9 109 4.08e-11 64.3
MS.gene004748.t1 AT4G00830 25.000 152 82 4 7 156 117 238 6.92e-11 64.7
MS.gene004748.t1 AT4G00830 25.000 152 82 4 7 156 117 238 6.92e-11 64.7
MS.gene004748.t1 AT5G19350 25.654 191 119 5 8 193 26 198 7.09e-11 64.3
MS.gene004748.t1 AT5G19350 25.654 191 119 5 8 193 26 198 7.13e-11 64.3
MS.gene004748.t1 AT4G13860 41.892 74 42 1 109 181 4 77 8.13e-11 58.9

Find 191 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAGTGCAGCGGCTGGATA+TGG 0.199366 1.1:+55642099 MS.gene004748:CDS
GCTCAAGCATCTGGTAATTA+TGG 0.207271 1.1:+55642366 MS.gene004748:CDS
CGTCAGTACTTTGAGGCTTA+TGG 0.215160 1.1:+55641442 MS.gene004748:CDS
AACGACCATCATATGCATTT+TGG 0.220885 1.1:-55641723 None:intergenic
TCCCTCTGGCTATGGCTCTA+TGG 0.223448 1.1:+55642002 MS.gene004748:CDS
TACGGTGCTGCTGCTGGATA+TGG 0.233890 1.1:+55641814 MS.gene004748:CDS
GGGGACACAAATGGAAATTC+TGG 0.245972 1.1:+55642312 MS.gene004748:CDS
AAGACATTTCATGATTTAAA+TGG 0.251191 1.1:+55641571 MS.gene004748:CDS
CAGATCCTTCTGTTCTTGAT+AGG 0.255513 1.1:+55640111 MS.gene004748:CDS
GGTGGAAGTGATAATTCTTA+TGG 0.266263 1.1:+55642162 MS.gene004748:CDS
AGATCTGGAAACTCCAATTC+TGG 0.283173 1.1:+55641346 MS.gene004748:CDS
GGTGCTGTTGGTGGGCGTAC+TGG 0.285659 1.1:+55642201 MS.gene004748:CDS
ACTGGACGACCACGAGGATT+TGG 0.286841 1.1:+55641502 MS.gene004748:CDS
AAGGAGCATTTCAGCAATTA+TGG 0.288185 1.1:+55640014 MS.gene004748:CDS
TGACCACTAGCATTACTATT+TGG 0.290071 1.1:-55642231 None:intergenic
TTACGGTAACGCTGCTCCTT+GGG 0.294029 1.1:+55642026 MS.gene004748:CDS
CCAAGTGGTGGTGCTGGATC+TGG 0.298460 1.1:+55642054 MS.gene004748:CDS
GCTGTTGGGCTTGTCGAGAC+TGG 0.303409 1.1:-55642443 None:intergenic
GCTAGCAATGGCCTTGGTTA+TGG 0.305001 1.1:+55641847 MS.gene004748:CDS
ATTTCCACCATTCCCAGAAT+TGG 0.306814 1.1:-55641359 None:intergenic
TGGTGGCAGTGGCAGCTATA+TGG 0.319199 1.1:+55642278 MS.gene004748:CDS
TAAGCAGCATTAGGGACATT+TGG 0.319444 1.1:-55641940 None:intergenic
CACCAGGATTGGCATCCTTT+GGG 0.321613 1.1:-55641621 None:intergenic
TATCAAGGGTATGGAGCTTC+TGG 0.321667 1.1:+55641694 MS.gene004748:CDS
CCACCAGCATAAGCAGCATT+AGG 0.341386 1.1:-55641949 None:intergenic
GTGGTGGCCCAAGGAGTTCA+TGG 0.341617 1.1:+55641968 MS.gene004748:CDS
GCACCAGGATTGGCATCCTT+TGG 0.343147 1.1:-55641622 None:intergenic
GCAGGTGGATTCCCACCTTA+TGG 0.345772 1.1:+55641781 MS.gene004748:CDS
AGCTATATGGGCAGTGGCTA+TGG 0.349286 1.1:+55642291 MS.gene004748:CDS
GAAGACAAACATGTTATTGA+TGG 0.351272 1.1:+55640140 MS.gene004748:CDS
ATTTCTGTCTCTTCGAGATC+TGG 0.352182 1.1:+55641331 MS.gene004748:CDS
GGTGCTCCAAGTGGTGGTGC+TGG 0.352327 1.1:+55642048 MS.gene004748:CDS
TATGGGAATCCAGGTGTATA+TGG 0.357794 1.1:+55642180 MS.gene004748:CDS
GTGCTGTTGGTGGGCGTACT+GGG 0.358635 1.1:+55642202 MS.gene004748:CDS
AAGCAGCATTAGGGACATTT+GGG 0.361470 1.1:-55641939 None:intergenic
TATGGGACTCCTCAGGGAAA+TGG 0.366806 1.1:+55642384 MS.gene004748:CDS
CTGGACGACCACGAGGATTT+GGG 0.374739 1.1:+55641503 MS.gene004748:CDS
CCCTCTGGCTATGGCTCTAT+GGG 0.377410 1.1:+55642003 MS.gene004748:CDS
CTCTCTTGAGAAAGCCCTCT+TGG 0.380820 1.1:-55641299 None:intergenic
GGTGGTTATGGCGGCGGGTA+TGG 0.383764 1.1:+55642141 MS.gene004748:CDS
GGTGGTGCCGCTGCTGGTTA+TGG 0.386143 1.1:+55641889 MS.gene004748:CDS
ACTATCAAAATTACTGCTGT+TGG 0.386629 1.1:-55642458 None:intergenic
ACCTAGAGGCTTTGGTTTCG+TGG 0.390416 1.1:+55640082 MS.gene004748:CDS
ATGGGACTCCTCAGGGAAAT+GGG 0.391721 1.1:+55642385 MS.gene004748:CDS
GGAGGTGGTAGTGGCGGAAT+GGG 0.393257 1.1:+55641667 MS.gene004748:CDS
GCTCAGGCTCCCTCTGGCTA+TGG 0.395122 1.1:+55641994 MS.gene004748:CDS
TGAGCAGGCCATGAACTCCT+TGG 0.399463 1.1:-55641976 None:intergenic
TCTGCTTACGGTGCTGCTGC+TGG 0.402283 1.1:+55641808 MS.gene004748:CDS
CTATCAAAATTACTGCTGTT+GGG 0.403143 1.1:-55642457 None:intergenic
GCTGGTTATGGTGGTGGCTA+TGG 0.403993 1.1:+55642414 MS.gene004748:CDS
GGGCAAGCTGGTTATGGTGG+TGG 0.405622 1.1:+55642408 MS.gene004748:CDS
CTCGTGGTCGTCCAGTATTT+TGG 0.406861 1.1:-55641495 None:intergenic
AAGGAGTTCATGGCCTGCTC+AGG 0.407314 1.1:+55641978 MS.gene004748:CDS
ACTGGTAAACCTAGAGGCTT+TGG 0.407636 1.1:+55640074 MS.gene004748:CDS
CCCATATCCAGCCGCTGCAC+TGG 0.408284 1.1:-55642100 None:intergenic
CTCAAGCATCTGGTAATTAT+GGG 0.410457 1.1:+55642367 MS.gene004748:CDS
ATACCGAGGAGGCAGTTGAT+AGG 0.410687 1.1:+55641539 MS.gene004748:CDS
AAAATTCCGTCAGTACTTTG+AGG 0.411179 1.1:+55641435 MS.gene004748:CDS
GTTACGGTAACGCTGCTCCT+TGG 0.411640 1.1:+55642025 MS.gene004748:CDS
GGACCTGCTGCTGCAACATA+TGG 0.415752 1.1:+55641913 MS.gene004748:CDS
TAGCCAGAGGGAGCCTGAGC+AGG 0.416103 1.1:-55641991 None:intergenic
AAATAGTAATGCTAGTGGTC+AGG 0.416638 1.1:+55642233 MS.gene004748:CDS
AGATCCTTCTGTTCTTGATA+GGG 0.422703 1.1:+55640112 MS.gene004748:CDS
TGGAGGGTTGCCTCCCACTC+TGG 0.424326 1.1:+55641405 MS.gene004748:CDS
GTCATGTATGACCAAAATAC+TGG 0.425122 1.1:+55641484 MS.gene004748:CDS
GGTTACGGGTATGGTGGTTA+TGG 0.425539 1.1:+55642129 MS.gene004748:CDS
TGGAGGTGGTAGTGGCGGAA+TGG 0.426792 1.1:+55641666 MS.gene004748:CDS
CACCAGCATAAGCAGCATTA+GGG 0.428191 1.1:-55641948 None:intergenic
GTGGAAGTGATAATTCTTAT+GGG 0.428912 1.1:+55642163 MS.gene004748:CDS
TTCCCATATGTTGCAGCAGC+AGG 0.429236 1.1:-55641916 None:intergenic
GGTGGTGCTGGAGGTGGTAG+TGG 0.429702 1.1:+55641658 MS.gene004748:CDS
GAGCAGGCCATGAACTCCTT+GGG 0.431541 1.1:-55641975 None:intergenic
TGGCCTGCTCAGGCTCCCTC+TGG 0.433036 1.1:+55641988 MS.gene004748:CDS
TCTGAACAGGCTCAAGCATC+TGG 0.438324 1.1:+55642357 MS.gene004748:CDS
AATCCACCTGCAGCACTTTG+AGG 0.446480 1.1:-55641769 None:intergenic
TGCAGCTTGGAGATCTGAAC+AGG 0.449022 1.1:+55642344 MS.gene004748:CDS
CTGTTGGGCTTGTCGAGACT+GGG 0.450476 1.1:-55642442 None:intergenic
GGCGGAATGGGTGGTTATCA+AGG 0.451686 1.1:+55641679 MS.gene004748:CDS
GGCTATGGCTCTATGGGTTA+CGG 0.452769 1.1:+55642009 MS.gene004748:CDS
GCTATATGGGCAGTGGCTAT+GGG 0.453617 1.1:+55642292 MS.gene004748:CDS
CTCCCAAAGGATGCCAATCC+TGG 0.453968 1.1:+55641619 MS.gene004748:CDS
CCAGTGCAGCGGCTGGATAT+GGG 0.457614 1.1:+55642100 MS.gene004748:CDS
TGGTAATTATGGGACTCCTC+AGG 0.457704 1.1:+55642377 MS.gene004748:CDS
CTTATGCTGGTGGTGGCCCA+AGG 0.460869 1.1:+55641959 MS.gene004748:CDS
CTTGGTTATGGTGCAGCATA+TGG 0.461527 1.1:+55641859 MS.gene004748:CDS
GGGAATCAAGGTTACGGGTA+TGG 0.463883 1.1:+55642120 MS.gene004748:CDS
GGTGGCAGTGGCAGCTATAT+GGG 0.464849 1.1:+55642279 MS.gene004748:CDS
GGGACTCCTCAGGGAAATGG+GGG 0.464934 1.1:+55642387 MS.gene004748:CDS
AAAGGAATGGATTCGGATCA+AGG 0.465987 1.1:+55639942 None:intergenic
GATATGGGAATCAAGGTTAC+GGG 0.468359 1.1:+55642115 MS.gene004748:CDS
GATCTGGAAACTCCAATTCT+GGG 0.470761 1.1:+55641347 MS.gene004748:CDS
GATAATTCTTATGGGAATCC+AGG 0.473239 1.1:+55642171 MS.gene004748:CDS
TGGGACTCCTCAGGGAAATG+GGG 0.473876 1.1:+55642386 MS.gene004748:CDS
CCTTATGGATCCTCTGCTTA+CGG 0.480491 1.1:+55641796 MS.gene004748:CDS
ACAAATGGAAATTCTGGGTA+TGG 0.484706 1.1:+55642318 MS.gene004748:CDS
ACGGCTATTTGCACCAGGAT+TGG 0.486166 1.1:-55641632 None:intergenic
GTCCCTAATGCTGCTTATGC+TGG 0.490213 1.1:+55641946 MS.gene004748:CDS
GGTTCGGCTAGCAATGGCCT+TGG 0.491314 1.1:+55641841 MS.gene004748:CDS
CAATCTCCCAGTGCAGCGGC+TGG 0.493261 1.1:+55642093 MS.gene004748:CDS
AACCCTATCAACTGCCTCCT+CGG 0.494485 1.1:-55641542 None:intergenic
ATGCAGCCTCAAAGTGCTGC+AGG 0.496615 1.1:+55641763 MS.gene004748:CDS
GGATATGGGAATCAAGGTTA+CGG 0.497803 1.1:+55642114 MS.gene004748:CDS
ACGGTGCTGCTGCTGGATAT+GGG 0.503532 1.1:+55641815 MS.gene004748:CDS
AGTTATGGTGGTGCCGCTGC+TGG 0.506490 1.1:+55641883 MS.gene004748:CDS
GGGACACAAATGGAAATTCT+GGG 0.506783 1.1:+55642313 MS.gene004748:CDS
AGTGGCTATGGGGACACAAA+TGG 0.508337 1.1:+55642303 MS.gene004748:CDS
CCAGATCCAGCACCACCACT+TGG 0.509006 1.1:-55642054 None:intergenic
TCCTGGTGCAAATAGCCGTA+TGG 0.510146 1.1:+55641636 MS.gene004748:CDS
GGTTATGGCGGCGGGTATGG+TGG 0.511710 1.1:+55642144 MS.gene004748:CDS
GGATCTGGTGCAGCAACTGC+AGG 0.512933 1.1:+55642069 MS.gene004748:CDS
CGTATGGGTGGTGCTGGAGG+TGG 0.515469 1.1:+55641652 MS.gene004748:CDS
TACCGAGGAGGCAGTTGATA+GGG 0.519939 1.1:+55641540 MS.gene004748:CDS
GGTGTATATGGTGCTGTTGG+TGG 0.522591 1.1:+55642192 MS.gene004748:CDS
GGTGGTAGTGGCGGAATGGG+TGG 0.522676 1.1:+55641670 MS.gene004748:CDS
GATCTCGAAGAGACAGAAAT+CGG 0.523559 1.1:-55641328 None:intergenic
CCATATCCAGCCGCTGCACT+GGG 0.523919 1.1:-55642099 None:intergenic
GCTGCTGCTGGATATGGGTA+TGG 0.524368 1.1:+55641820 MS.gene004748:CDS
GGAAACTCCAATTCTGGGAA+TGG 0.526118 1.1:+55641352 MS.gene004748:CDS
GGTGCAGCATATGGAAGTTA+TGG 0.528477 1.1:+55641868 MS.gene004748:CDS
TGCTGGATATGGGTATGGTT+CGG 0.529889 1.1:+55641825 MS.gene004748:CDS
AATAGCCGTATGGGTGGTGC+TGG 0.531723 1.1:+55641646 MS.gene004748:CDS
GGTAGTGAACTGCAAGGTAG+TGG 0.533329 1.1:+55642258 MS.gene004748:CDS
CCCATACGGCTATTTGCACC+AGG 0.534366 1.1:-55641637 None:intergenic
ATGGGTGGTTATCAAGGGTA+TGG 0.538262 1.1:+55641685 MS.gene004748:CDS
CCTTGGGGTGCTCCAAGTGG+TGG 0.539752 1.1:+55642042 MS.gene004748:CDS
GGTGCTGGAGGTGGTAGTGG+CGG 0.542113 1.1:+55641661 MS.gene004748:CDS
TTTCATCGGTGGGATTTCAT+GGG 0.547867 1.1:+55639971 MS.gene004748:CDS
GGTTATGGTGGTGGCTATGG+TGG 0.548099 1.1:+55642417 MS.gene004748:CDS
GGTAATTATGGGACTCCTCA+GGG 0.549138 1.1:+55642378 MS.gene004748:CDS
GGGTATGGTGGTTATGGCGG+CGG 0.549502 1.1:+55642135 MS.gene004748:CDS
CCAGGTGTATATGGTGCTGT+TGG 0.550786 1.1:+55642189 MS.gene004748:CDS
GCGGCTGGATATGGGAATCA+AGG 0.551018 1.1:+55642108 MS.gene004748:CDS
AATGCTGCTTATGCTGGTGG+TGG 0.553175 1.1:+55641952 MS.gene004748:CDS
AACTCCAATTCTGGGAATGG+TGG 0.554277 1.1:+55641355 MS.gene004748:CDS
AATAGTAATGCTAGTGGTCA+GGG 0.554643 1.1:+55642234 MS.gene004748:CDS
GACCTGCTGCTGCAACATAT+GGG 0.557841 1.1:+55641914 MS.gene004748:CDS
GTGTATATGGTGCTGTTGGT+GGG 0.561548 1.1:+55642193 MS.gene004748:CDS
CCTGGTGCAAATAGCCGTAT+GGG 0.563282 1.1:+55641637 MS.gene004748:CDS
CTGGGTATGGAAATGCAGCT+TGG 0.563448 1.1:+55642331 MS.gene004748:CDS
AGCAGCAGCACCGTAAGCAG+AGG 0.566324 1.1:-55641806 None:intergenic
GGACTCCTCAGGGAAATGGG+GGG 0.568599 1.1:+55642388 MS.gene004748:CDS
AGCCGTATGGGTGGTGCTGG+AGG 0.570725 1.1:+55641649 MS.gene004748:CDS
GGTATGGTGGTTATGGCGGC+GGG 0.573792 1.1:+55642136 MS.gene004748:CDS
CCTAATGCTGCTTATGCTGG+TGG 0.574642 1.1:+55641949 MS.gene004748:CDS
TACGGTAACGCTGCTCCTTG+GGG 0.578018 1.1:+55642027 MS.gene004748:CDS
CAAGGGTATGGAGCTTCTGG+TGG 0.579903 1.1:+55641697 MS.gene004748:CDS
CCGTAAGCAGAGGATCCATA+AGG 0.580853 1.1:-55641796 None:intergenic
ATGGTCGTTCAGATTCTAGT+AGG 0.588507 1.1:+55641737 MS.gene004748:CDS
GGTGCCGCTGCTGGTTATGG+TGG 0.588780 1.1:+55641892 MS.gene004748:CDS
GCGGAATGGGTGGTTATCAA+GGG 0.588939 1.1:+55641680 MS.gene004748:CDS
TTTAAATGGTAAACAAGTAG+AGG 0.589277 1.1:+55641585 MS.gene004748:CDS
TATTCAGGTTGATGCCAAGA+GGG 0.591422 1.1:+55641285 MS.gene004748:intron
TCGAAGAGACAGAAATCGGT+TGG 0.596694 1.1:-55641324 None:intergenic
CATAAGCCTCAAAGTACTGA+CGG 0.596705 1.1:-55641441 None:intergenic
AGTGGCAGCTATATGGGCAG+TGG 0.597675 1.1:+55642285 MS.gene004748:CDS
AGAACCCTATCAAGAACAGA+AGG 0.599565 1.1:-55640116 None:intergenic
GATTTCATGGGATACGAATG+AGG 0.601256 1.1:+55639983 MS.gene004748:CDS
CTGCAAGGTAGTGGTGGCAG+TGG 0.601333 1.1:+55642267 MS.gene004748:CDS
CCCATAGAGCCATAGCCAGA+GGG 0.602657 1.1:-55642003 None:intergenic
CCAACAGCACCATATACACC+TGG 0.603562 1.1:-55642189 None:intergenic
GGAAACCAAAATGCATATGA+TGG 0.603835 1.1:+55641718 MS.gene004748:CDS
GGGTATGGTTCGGCTAGCAA+TGG 0.604135 1.1:+55641835 MS.gene004748:CDS
AATCAAGGTTACGGGTATGG+TGG 0.608429 1.1:+55642123 MS.gene004748:CDS
TAAGCAGAGGATCCATAAGG+TGG 0.611830 1.1:-55641793 None:intergenic
CCACCACTTGGAGCACCCCA+AGG 0.612791 1.1:-55642042 None:intergenic
CACCTCCAGCACCACCCATA+CGG 0.615756 1.1:-55641651 None:intergenic
TACGGGTATGGTGGTTATGG+CGG 0.616171 1.1:+55642132 MS.gene004748:CDS
ACCACGAAACCAAAGCCTCT+AGG 0.617911 1.1:-55640083 None:intergenic
CAGCCTCAAAGTGCTGCAGG+TGG 0.620843 1.1:+55641766 MS.gene004748:CDS
CAAGAGGGCTTTCTCAAGAG+AGG 0.622387 1.1:+55641300 MS.gene004748:CDS
GCTCCTTGGGGTGCTCCAAG+TGG 0.623958 1.1:+55642039 MS.gene004748:CDS
GGTAAAGCGTGCACTCCCAA+AGG 0.624619 1.1:+55641606 MS.gene004748:CDS
ACCCATAGAGCCATAGCCAG+AGG 0.625073 1.1:-55642004 None:intergenic
GTTATGAGAGAGAAGAACAC+TGG 0.644240 1.1:+55640056 MS.gene004748:CDS
TTATTCAGGTTGATGCCAAG+AGG 0.644453 1.1:+55641284 MS.gene004748:intron
ACATGTTATTGATGGCAGAA+CGG 0.646515 1.1:+55640148 MS.gene004748:CDS
TACGAATGAGGAGAAGCTGA+AGG 0.650828 1.1:+55639995 MS.gene004748:CDS
AGGTCAATCTCCCAGTGCAG+CGG 0.652350 1.1:+55642089 MS.gene004748:CDS
AGGTCCACCATAACCAGCAG+CGG 0.653962 1.1:-55641896 None:intergenic
CTATATGGGCAGTGGCTATG+GGG 0.656547 1.1:+55642293 MS.gene004748:CDS
GCTCCAAATAGTAATGCTAG+TGG 0.658443 1.1:+55642228 MS.gene004748:CDS
AAGCAGAGGATCCATAAGGT+GGG 0.660176 1.1:-55641792 None:intergenic
CATATGCTGCACCATAACCA+AGG 0.663627 1.1:-55641858 None:intergenic
AGTGAACTGCAAGGTAGTGG+TGG 0.666951 1.1:+55642261 MS.gene004748:CDS
CAAAATACTGGACGACCACG+AGG 0.670177 1.1:+55641496 MS.gene004748:CDS
GCAGCATATGGAAGTTATGG+TGG 0.673073 1.1:+55641871 MS.gene004748:CDS
CAGGGTGGTAGTGAACTGCA+AGG 0.689901 1.1:+55642252 MS.gene004748:CDS
GGTGCAAATAGCCGTATGGG+TGG 0.691605 1.1:+55641640 MS.gene004748:CDS
AGTAATGCTAGTGGTCAGGG+TGG 0.707479 1.1:+55642237 MS.gene004748:CDS
AAGAACACTGGTAAACCTAG+AGG 0.711338 1.1:+55640068 MS.gene004748:CDS
GTAATAAACCCAAATCCTCG+TGG 0.717165 1.1:-55641511 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTTTTTTGTTTAAAAATT+TGG + chr1.1:55640254-55640273 MS.gene004748:intron 10.0%
!!! TCTGTTTCATTTAATATTTT+CGG - chr1.1:55640964-55640983 None:intergenic 15.0%
!!! TTTGTTTTGTTTAAAGATTA+AGG + chr1.1:55640332-55640351 MS.gene004748:intron 15.0%
!! AAGACATTTCATGATTTAAA+TGG + chr1.1:55641571-55641590 MS.gene004748:CDS 20.0%
!! AGGATTTAAATAGATTGTAT+CGG + chr1.1:55640812-55640831 MS.gene004748:intron 20.0%
!!! AGATTATTTATTCCTGTTTT+TGG + chr1.1:55640290-55640309 MS.gene004748:intron 20.0%
!!! ATGTTGTAATTTTGTTATTC+AGG + chr1.1:55641270-55641289 MS.gene004748:intron 20.0%
!!! GTTTTCATTGTAATTTTTGT+GGG + chr1.1:55640384-55640403 MS.gene004748:intron 20.0%
!!! TTTGTTTTGTTCAATTGTAA+AGG + chr1.1:55640412-55640431 MS.gene004748:intron 20.0%
! AAAGTATAACGTTTCACTTT+GGG + chr1.1:55640843-55640862 MS.gene004748:intron 25.0%
! AAATTACAACATTGCTAGTT+AGG - chr1.1:55641262-55641281 None:intergenic 25.0%
! AAGATTAAATGTTGCATCAT+TGG + chr1.1:55640691-55640710 MS.gene004748:intron 25.0%
! AGAACCAAAAAGATATTTGT+TGG + chr1.1:55641385-55641404 MS.gene004748:CDS 25.0%
! GCTTTATATATGCAATAAGA+AGG - chr1.1:55640942-55640961 None:intergenic 25.0%
! TAAAGTATAACGTTTCACTT+TGG + chr1.1:55640842-55640861 MS.gene004748:intron 25.0%
! TATTGTGTAATAGAATTGAG+CGG + chr1.1:55640612-55640631 MS.gene004748:intron 25.0%
! TTTAAATGGTAAACAAGTAG+AGG + chr1.1:55641585-55641604 MS.gene004748:CDS 25.0%
!! AAGTTTTTACAGCAAACAAA+AGG - chr1.1:55640658-55640677 None:intergenic 25.0%
!! ATATTTTTCCATTGTGGAAT+AGG + chr1.1:55640759-55640778 MS.gene004748:intron 25.0%
!! ATGCAACATTTAATCTTTTC+AGG - chr1.1:55640688-55640707 None:intergenic 25.0%
!! GGTTTTCATTGTAATTTTTG+TGG + chr1.1:55640383-55640402 MS.gene004748:intron 25.0%
!!! AGATTAAGGCTTTAATTTTG+AGG + chr1.1:55640346-55640365 MS.gene004748:intron 25.0%
!!! ATTAAGGCTTTAATTTTGAG+GGG + chr1.1:55640348-55640367 MS.gene004748:intron 25.0%
!!! GAGACTAATTAATTTGTTCA+TGG + chr1.1:55640538-55640557 MS.gene004748:intron 25.0%
!!! GATTAAGGCTTTAATTTTGA+GGG + chr1.1:55640347-55640366 MS.gene004748:intron 25.0%
!!! TAATGGATATTTTTCCATTG+TGG + chr1.1:55640753-55640772 MS.gene004748:intron 25.0%
!!! TTATTTTTCCATTGTGGAAT+AGG + chr1.1:55640725-55640744 MS.gene004748:intron 25.0%
AAGCTACATATGTTTATGAC+AGG + chr1.1:55641118-55641137 MS.gene004748:intron 30.0%
ATAACCCTAACATAGGTAAA+AGG - chr1.1:55640221-55640240 None:intergenic 30.0%
GAAGACAAACATGTTATTGA+TGG + chr1.1:55640140-55640159 MS.gene004748:CDS 30.0%
GTGGAAGTGATAATTCTTAT+GGG + chr1.1:55642163-55642182 MS.gene004748:CDS 30.0%
TAACCCTAACATAGGTAAAA+GGG - chr1.1:55640220-55640239 None:intergenic 30.0%
TATGCAATAAGAAGGATTTC+AGG - chr1.1:55640934-55640953 None:intergenic 30.0%
TTAGGCTTATAATCGATAGT+GGG - chr1.1:55641244-55641263 None:intergenic 30.0%
TTAGTATACCTATTCCACAA+TGG - chr1.1:55640736-55640755 None:intergenic 30.0%
TTGTGGAATAGGTATACTAA+TGG + chr1.1:55640736-55640755 MS.gene004748:intron 30.0%
! ACCAAAAAGATATTTGTTGG+AGG + chr1.1:55641388-55641407 MS.gene004748:CDS 30.0%
! ATACCCTTTTACCTATGTTA+GGG + chr1.1:55640214-55640233 MS.gene004748:intron 30.0%
! CCAAAAAGATATTTGTTGGA+GGG + chr1.1:55641389-55641408 MS.gene004748:CDS 30.0%
! TATACCCTTTTACCTATGTT+AGG + chr1.1:55640213-55640232 MS.gene004748:intron 30.0%
! TCATTGTAATTTTTGTGGGT+GGG + chr1.1:55640388-55640407 MS.gene004748:intron 30.0%
! TTCATTGTAATTTTTGTGGG+TGG + chr1.1:55640387-55640406 MS.gene004748:intron 30.0%
! TTTTATGAGCTGTTTATCGA+TGG + chr1.1:55640478-55640497 MS.gene004748:intron 30.0%
!! GGTACATTATTTTTCCATTG+TGG + chr1.1:55640719-55640738 MS.gene004748:intron 30.0%
!! GTTTATTACTTTTGATACCG+AGG + chr1.1:55641525-55641544 MS.gene004748:CDS 30.0%
!! TTAAGGCTTTAATTTTGAGG+GGG + chr1.1:55640349-55640368 MS.gene004748:intron 30.0%
AAAATTCCGTCAGTACTTTG+AGG + chr1.1:55641435-55641454 MS.gene004748:CDS 35.0%
AAATAGTAATGCTAGTGGTC+AGG + chr1.1:55642233-55642252 MS.gene004748:CDS 35.0%
AATAGTAATGCTAGTGGTCA+GGG + chr1.1:55642234-55642253 MS.gene004748:CDS 35.0%
ACAAATGGAAATTCTGGGTA+TGG + chr1.1:55642318-55642337 MS.gene004748:CDS 35.0%
AGAAGGATTTCAGGAAAACA+AGG - chr1.1:55640925-55640944 None:intergenic 35.0%
AGATCCTTCTGTTCTTGATA+GGG + chr1.1:55640112-55640131 MS.gene004748:CDS 35.0%
CATTCACATAACCCTAACAT+AGG - chr1.1:55640228-55640247 None:intergenic 35.0%
CTCAAGCATCTGGTAATTAT+GGG + chr1.1:55642367-55642386 MS.gene004748:CDS 35.0%
GATAATTCTTATGGGAATCC+AGG + chr1.1:55642171-55642190 MS.gene004748:CDS 35.0%
GGAAACCAAAATGCATATGA+TGG + chr1.1:55641718-55641737 MS.gene004748:CDS 35.0%
GGTGGAAGTGATAATTCTTA+TGG + chr1.1:55642162-55642181 MS.gene004748:CDS 35.0%
GTCATGTATGACCAAAATAC+TGG + chr1.1:55641484-55641503 MS.gene004748:CDS 35.0%
GTTAGGCTTATAATCGATAG+TGG - chr1.1:55641245-55641264 None:intergenic 35.0%
TCCAATTCACAACCAAAAAC+AGG - chr1.1:55640305-55640324 None:intergenic 35.0%
TGACCACTAGCATTACTATT+TGG - chr1.1:55642234-55642253 None:intergenic 35.0%
TTTACAGCAAACAAAAGGCA+GGG - chr1.1:55640653-55640672 None:intergenic 35.0%
! AACGACCATCATATGCATTT+TGG - chr1.1:55641726-55641745 None:intergenic 35.0%
! AATGTTGCATCATTGGTTGT+AGG + chr1.1:55640698-55640717 MS.gene004748:intron 35.0%
! AATTTTTCTTCAGCCAGAGT+GGG - chr1.1:55641421-55641440 None:intergenic 35.0%
! ACATGTTATTGATGGCAGAA+CGG + chr1.1:55640148-55640167 MS.gene004748:CDS 35.0%
! CATTGTAATTTTTGTGGGTG+GGG + chr1.1:55640389-55640408 MS.gene004748:intron 35.0%
! CCCTCCAACAAATATCTTTT+TGG - chr1.1:55641392-55641411 None:intergenic 35.0%
! GATCAAGGAAAGCTTTTCAT+CGG + chr1.1:55639957-55639976 MS.gene004748:CDS 35.0%
! TTTTACAGCAAACAAAAGGC+AGG - chr1.1:55640654-55640673 None:intergenic 35.0%
!! AAGGAGCATTTCAGCAATTA+TGG + chr1.1:55640014-55640033 MS.gene004748:CDS 35.0%
!! TAAGGCTTTAATTTTGAGGG+GGG + chr1.1:55640350-55640369 MS.gene004748:intron 35.0%
!! TATTACTTTTGATACCGAGG+AGG + chr1.1:55641528-55641547 MS.gene004748:CDS 35.0%
!! TTATAATCGATAGTGGGAAC+TGG - chr1.1:55641238-55641257 None:intergenic 35.0%
!!! TCCTGTTTTTGGTTGTGAAT+TGG + chr1.1:55640301-55640320 MS.gene004748:intron 35.0%
!!! TGTTTTTGGTTGTGAATTGG+AGG + chr1.1:55640304-55640323 MS.gene004748:intron 35.0%
AAGAACACTGGTAAACCTAG+AGG + chr1.1:55640068-55640087 MS.gene004748:CDS 40.0%
AAGCAGCATTAGGGACATTT+GGG - chr1.1:55641942-55641961 None:intergenic 40.0%
ACTGGAAGTAAAGCAAACAC+AGG - chr1.1:55641220-55641239 None:intergenic 40.0%
AGAACCCTATCAAGAACAGA+AGG - chr1.1:55640119-55640138 None:intergenic 40.0%
AGATCTGGAAACTCCAATTC+TGG + chr1.1:55641346-55641365 MS.gene004748:CDS 40.0%
AGGAGATACCTATTCCACAA+TGG - chr1.1:55640770-55640789 None:intergenic 40.0%
ATAGGTATCTCCTTGGTTGT+AGG + chr1.1:55640777-55640796 MS.gene004748:intron 40.0%
ATGGTCGTTCAGATTCTAGT+AGG + chr1.1:55641737-55641756 MS.gene004748:CDS 40.0%
ATTTCCACCATTCCCAGAAT+TGG - chr1.1:55641362-55641381 None:intergenic 40.0%
ATTTCTGTCTCTTCGAGATC+TGG + chr1.1:55641331-55641350 MS.gene004748:CDS 40.0%
CACTAATGTACCTACAACCA+AGG - chr1.1:55640790-55640809 None:intergenic 40.0%
CAGATCCTTCTGTTCTTGAT+AGG + chr1.1:55640111-55640130 MS.gene004748:CDS 40.0%
CTGGAAGTAAAGCAAACACA+GGG - chr1.1:55641219-55641238 None:intergenic 40.0%
GATATGGGAATCAAGGTTAC+GGG + chr1.1:55642115-55642134 MS.gene004748:CDS 40.0%
GATCTCGAAGAGACAGAAAT+CGG - chr1.1:55641331-55641350 None:intergenic 40.0%
GATCTGGAAACTCCAATTCT+GGG + chr1.1:55641347-55641366 MS.gene004748:CDS 40.0%
GATTTCATGGGATACGAATG+AGG + chr1.1:55639983-55640002 MS.gene004748:CDS 40.0%
GCTCAAGCATCTGGTAATTA+TGG + chr1.1:55642366-55642385 MS.gene004748:CDS 40.0%
GCTCCAAATAGTAATGCTAG+TGG + chr1.1:55642228-55642247 MS.gene004748:CDS 40.0%
GGATATGGGAATCAAGGTTA+CGG + chr1.1:55642114-55642133 MS.gene004748:CDS 40.0%
GGGACACAAATGGAAATTCT+GGG + chr1.1:55642313-55642332 MS.gene004748:CDS 40.0%
GTAATAAACCCAAATCCTCG+TGG - chr1.1:55641514-55641533 None:intergenic 40.0%
GTTATGAGAGAGAAGAACAC+TGG + chr1.1:55640056-55640075 MS.gene004748:CDS 40.0%
GTTGTAGGTACATTAGTGAC+AGG + chr1.1:55640792-55640811 MS.gene004748:intron 40.0%
TAAGCAGCATTAGGGACATT+TGG - chr1.1:55641943-55641962 None:intergenic 40.0%
TATGGGAATCCAGGTGTATA+TGG + chr1.1:55642180-55642199 MS.gene004748:CDS 40.0%
TGTAATAGAATTGAGCGGTG+CGG + chr1.1:55640617-55640636 MS.gene004748:intron 40.0%
TTACAGCAAACAAAAGGCAG+GGG - chr1.1:55640652-55640671 None:intergenic 40.0%
TTGTGGAATAGGTATCTCCT+TGG + chr1.1:55640770-55640789 MS.gene004748:intron 40.0%
TTTCATCGGTGGGATTTCAT+GGG + chr1.1:55639971-55639990 MS.gene004748:CDS 40.0%
TTTGGTTGTGAATTGGAGGT+GGG + chr1.1:55640308-55640327 MS.gene004748:intron 40.0%
! AAGGAAAGCTTTTCATCGGT+GGG + chr1.1:55639961-55639980 MS.gene004748:CDS 40.0%
! ACACAACAGATCTAGCTTCA+AGG - chr1.1:55641057-55641076 None:intergenic 40.0%
! CACTTTGGGAGAAGATACAT+TGG + chr1.1:55640857-55640876 MS.gene004748:intron 40.0%
! GAATTTTTCTTCAGCCAGAG+TGG - chr1.1:55641422-55641441 None:intergenic 40.0%
! TTTTCATCGGTGGGATTTCA+TGG + chr1.1:55639970-55639989 MS.gene004748:CDS 40.0%
!! CATAAGCCTCAAAGTACTGA+CGG - chr1.1:55641444-55641463 None:intergenic 40.0%
!! TATTCAGGTTGATGCCAAGA+GGG + chr1.1:55641285-55641304 MS.gene004748:intron 40.0%
!! TTATTCAGGTTGATGCCAAG+AGG + chr1.1:55641284-55641303 MS.gene004748:intron 40.0%
!! TTTTGGTTGTGAATTGGAGG+TGG + chr1.1:55640307-55640326 MS.gene004748:intron 40.0%
!!! GATTGCGTGTTTGGTTTTCT+AGG + chr1.1:55640504-55640523 MS.gene004748:intron 40.0%
AAGCAGAGGATCCATAAGGT+GGG - chr1.1:55641795-55641814 None:intergenic 45.0%
AATCAAGGTTACGGGTATGG+TGG + chr1.1:55642123-55642142 MS.gene004748:CDS 45.0%
ACTGGTAAACCTAGAGGCTT+TGG + chr1.1:55640074-55640093 MS.gene004748:CDS 45.0%
AGTAAAGCAAACACAGGGTC+TGG - chr1.1:55641214-55641233 None:intergenic 45.0%
ATGGGTGGTTATCAAGGGTA+TGG + chr1.1:55641685-55641704 MS.gene004748:CDS 45.0%
CACCAGCATAAGCAGCATTA+GGG - chr1.1:55641951-55641970 None:intergenic 45.0%
CATATGCTGCACCATAACCA+AGG - chr1.1:55641861-55641880 None:intergenic 45.0%
CCTTATGGATCCTCTGCTTA+CGG + chr1.1:55641796-55641815 MS.gene004748:CDS 45.0%
CTTGGTTATGGTGCAGCATA+TGG + chr1.1:55641859-55641878 MS.gene004748:CDS 45.0%
GCAGCATATGGAAGTTATGG+TGG + chr1.1:55641871-55641890 MS.gene004748:CDS 45.0%
GGGGACACAAATGGAAATTC+TGG + chr1.1:55642312-55642331 MS.gene004748:CDS 45.0%
GGTAATTATGGGACTCCTCA+GGG + chr1.1:55642378-55642397 MS.gene004748:CDS 45.0%
GGTGCAGCATATGGAAGTTA+TGG + chr1.1:55641868-55641887 MS.gene004748:CDS 45.0%
GTAAAGCAAACACAGGGTCT+GGG - chr1.1:55641213-55641232 None:intergenic 45.0%
TAAGCAGAGGATCCATAAGG+TGG - chr1.1:55641796-55641815 None:intergenic 45.0%
TACGAATGAGGAGAAGCTGA+AGG + chr1.1:55639995-55640014 MS.gene004748:CDS 45.0%
TCGAAGAGACAGAAATCGGT+TGG - chr1.1:55641327-55641346 None:intergenic 45.0%
TGCTGGATATGGGTATGGTT+CGG + chr1.1:55641825-55641844 MS.gene004748:CDS 45.0%
TGGTAATTATGGGACTCCTC+AGG + chr1.1:55642377-55642396 MS.gene004748:CDS 45.0%
! AACTCCAATTCTGGGAATGG+TGG + chr1.1:55641355-55641374 MS.gene004748:CDS 45.0%
! CAAGGAAAGCTTTTCATCGG+TGG + chr1.1:55639960-55639979 MS.gene004748:CDS 45.0%
! GGAAACTCCAATTCTGGGAA+TGG + chr1.1:55641352-55641371 MS.gene004748:CDS 45.0%
! GTTATTGATGGCAGAACGGT+CGG + chr1.1:55640152-55640171 MS.gene004748:intron 45.0%
! TATCAAGGGTATGGAGCTTC+TGG + chr1.1:55641694-55641713 MS.gene004748:CDS 45.0%
!! CGATGGATTGATTGCGTGTT+TGG + chr1.1:55640495-55640514 MS.gene004748:intron 45.0%
!! CGTCAGTACTTTGAGGCTTA+TGG + chr1.1:55641442-55641461 MS.gene004748:CDS 45.0%
!! GTGTATATGGTGCTGTTGGT+GGG + chr1.1:55642193-55642212 MS.gene004748:CDS 45.0%
AACCCTATCAACTGCCTCCT+CGG - chr1.1:55641545-55641564 None:intergenic 50.0%
AATCCACCTGCAGCACTTTG+AGG - chr1.1:55641772-55641791 None:intergenic 50.0%
ACCACGAAACCAAAGCCTCT+AGG - chr1.1:55640086-55640105 None:intergenic 50.0%
ACGGCTATTTGCACCAGGAT+TGG - chr1.1:55641635-55641654 None:intergenic 50.0%
AGCTATATGGGCAGTGGCTA+TGG + chr1.1:55642291-55642310 MS.gene004748:CDS 50.0%
AGTAATGCTAGTGGTCAGGG+TGG + chr1.1:55642237-55642256 MS.gene004748:CDS 50.0%
AGTGGCTATGGGGACACAAA+TGG + chr1.1:55642303-55642322 MS.gene004748:CDS 50.0%
ATACCGAGGAGGCAGTTGAT+AGG + chr1.1:55641539-55641558 MS.gene004748:CDS 50.0%
ATGGGACTCCTCAGGGAAAT+GGG + chr1.1:55642385-55642404 MS.gene004748:CDS 50.0%
CAAAATACTGGACGACCACG+AGG + chr1.1:55641496-55641515 MS.gene004748:CDS 50.0%
CAAGAGGGCTTTCTCAAGAG+AGG + chr1.1:55641300-55641319 MS.gene004748:CDS 50.0%
CCAACAGCACCATATACACC+TGG - chr1.1:55642192-55642211 None:intergenic 50.0%
CCACCAGCATAAGCAGCATT+AGG - chr1.1:55641952-55641971 None:intergenic 50.0%
CCGTAAGCAGAGGATCCATA+AGG - chr1.1:55641799-55641818 None:intergenic 50.0%
CCTGGTGCAAATAGCCGTAT+GGG + chr1.1:55641637-55641656 MS.gene004748:CDS 50.0%
CTATATGGGCAGTGGCTATG+GGG + chr1.1:55642293-55642312 MS.gene004748:CDS 50.0%
CTCTCTTGAGAAAGCCCTCT+TGG - chr1.1:55641302-55641321 None:intergenic 50.0%
CTGGGTATGGAAATGCAGCT+TGG + chr1.1:55642331-55642350 MS.gene004748:CDS 50.0%
GACCTGCTGCTGCAACATAT+GGG + chr1.1:55641914-55641933 MS.gene004748:CDS 50.0%
GCGGAATGGGTGGTTATCAA+GGG + chr1.1:55641680-55641699 MS.gene004748:CDS 50.0%
GCTATATGGGCAGTGGCTAT+GGG + chr1.1:55642292-55642311 MS.gene004748:CDS 50.0%
GGGAATCAAGGTTACGGGTA+TGG + chr1.1:55642120-55642139 MS.gene004748:CDS 50.0%
GGTAGTGAACTGCAAGGTAG+TGG + chr1.1:55642258-55642277 MS.gene004748:CDS 50.0%
GGTTACGGGTATGGTGGTTA+TGG + chr1.1:55642129-55642148 MS.gene004748:CDS 50.0%
TACGGGTATGGTGGTTATGG+CGG + chr1.1:55642132-55642151 MS.gene004748:CDS 50.0%
TATGGGACTCCTCAGGGAAA+TGG + chr1.1:55642384-55642403 MS.gene004748:CDS 50.0%
TCCTGGTGCAAATAGCCGTA+TGG + chr1.1:55641636-55641655 MS.gene004748:CDS 50.0%
TCTGAACAGGCTCAAGCATC+TGG + chr1.1:55642357-55642376 MS.gene004748:CDS 50.0%
TGCAGCTTGGAGATCTGAAC+AGG + chr1.1:55642344-55642363 MS.gene004748:CDS 50.0%
TTACGGTAACGCTGCTCCTT+GGG + chr1.1:55642026-55642045 MS.gene004748:CDS 50.0%
TTCCCATATGTTGCAGCAGC+AGG - chr1.1:55641919-55641938 None:intergenic 50.0%
! AATGCTGCTTATGCTGGTGG+TGG + chr1.1:55641952-55641971 MS.gene004748:CDS 50.0%
! ACCTAGAGGCTTTGGTTTCG+TGG + chr1.1:55640082-55640101 MS.gene004748:CDS 50.0%
! AGTGAACTGCAAGGTAGTGG+TGG + chr1.1:55642261-55642280 MS.gene004748:CDS 50.0%
! CACCAGGATTGGCATCCTTT+GGG - chr1.1:55641624-55641643 None:intergenic 50.0%
! CCTAATGCTGCTTATGCTGG+TGG + chr1.1:55641949-55641968 MS.gene004748:CDS 50.0%
! CTCGTGGTCGTCCAGTATTT+TGG - chr1.1:55641498-55641517 None:intergenic 50.0%
! GCTAGCAATGGCCTTGGTTA+TGG + chr1.1:55641847-55641866 MS.gene004748:CDS 50.0%
! GGCTATGGCTCTATGGGTTA+CGG + chr1.1:55642009-55642028 MS.gene004748:CDS 50.0%
! GTCCCTAATGCTGCTTATGC+TGG + chr1.1:55641946-55641965 MS.gene004748:CDS 50.0%
! TACCGAGGAGGCAGTTGATA+GGG + chr1.1:55641540-55641559 MS.gene004748:CDS 50.0%
! TTTGAGGGGGGTGTGTTTAG+TGG + chr1.1:55640362-55640381 MS.gene004748:intron 50.0%
! TTTTCTTCAGCCAGAGTGGG+AGG - chr1.1:55641418-55641437 None:intergenic 50.0%
!! CCAGGTGTATATGGTGCTGT+TGG + chr1.1:55642189-55642208 MS.gene004748:CDS 50.0%
!! GGTGTATATGGTGCTGTTGG+TGG + chr1.1:55642192-55642211 MS.gene004748:CDS 50.0%
AAGGAGTTCATGGCCTGCTC+AGG + chr1.1:55641978-55641997 MS.gene004748:CDS 55.0%
AATAGCCGTATGGGTGGTGC+TGG + chr1.1:55641646-55641665 MS.gene004748:CDS 55.0%
AATGGGGGGCAAGCTGGTTA+TGG + chr1.1:55642402-55642421 MS.gene004748:CDS 55.0%
ACCCATAGAGCCATAGCCAG+AGG - chr1.1:55642007-55642026 None:intergenic 55.0%
ACTGGACGACCACGAGGATT+TGG + chr1.1:55641502-55641521 MS.gene004748:CDS 55.0%
AGGTCAATCTCCCAGTGCAG+CGG + chr1.1:55642089-55642108 MS.gene004748:CDS 55.0%
AGGTCCACCATAACCAGCAG+CGG - chr1.1:55641899-55641918 None:intergenic 55.0%
AGTGGCAGCTATATGGGCAG+TGG + chr1.1:55642285-55642304 MS.gene004748:CDS 55.0%
CCCATACGGCTATTTGCACC+AGG - chr1.1:55641640-55641659 None:intergenic 55.0%
CCCATAGAGCCATAGCCAGA+GGG - chr1.1:55642006-55642025 None:intergenic 55.0%
CTCCCAAAGGATGCCAATCC+TGG + chr1.1:55641619-55641638 MS.gene004748:CDS 55.0%
CTGGACGACCACGAGGATTT+GGG + chr1.1:55641503-55641522 MS.gene004748:CDS 55.0%
CTGTTGGGCTTGTCGAGACT+GGG - chr1.1:55642445-55642464 None:intergenic 55.0%
GAGCAGGCCATGAACTCCTT+GGG - chr1.1:55641978-55641997 None:intergenic 55.0%
GCGGCTGGATATGGGAATCA+AGG + chr1.1:55642108-55642127 MS.gene004748:CDS 55.0%
GCTGCTGCTGGATATGGGTA+TGG + chr1.1:55641820-55641839 MS.gene004748:CDS 55.0%
GGACCTGCTGCTGCAACATA+TGG + chr1.1:55641913-55641932 MS.gene004748:CDS 55.0%
GGCGGAATGGGTGGTTATCA+AGG + chr1.1:55641679-55641698 MS.gene004748:CDS 55.0%
GGTAAAGCGTGCACTCCCAA+AGG + chr1.1:55641606-55641625 MS.gene004748:CDS 55.0%
GGTGCAAATAGCCGTATGGG+TGG + chr1.1:55641640-55641659 MS.gene004748:CDS 55.0%
GGTGGCAGTGGCAGCTATAT+GGG + chr1.1:55642279-55642298 MS.gene004748:CDS 55.0%
GTTACGGTAACGCTGCTCCT+TGG + chr1.1:55642025-55642044 MS.gene004748:CDS 55.0%
TACGGTAACGCTGCTCCTTG+GGG + chr1.1:55642027-55642046 MS.gene004748:CDS 55.0%
TGAGCAGGCCATGAACTCCT+TGG - chr1.1:55641979-55641998 None:intergenic 55.0%
TGGGACTCCTCAGGGAAATG+GGG + chr1.1:55642386-55642405 MS.gene004748:CDS 55.0%
TGGTGGCAGTGGCAGCTATA+TGG + chr1.1:55642278-55642297 MS.gene004748:CDS 55.0%
! CAAGGGTATGGAGCTTCTGG+TGG + chr1.1:55641697-55641716 MS.gene004748:CDS 55.0%
! CAGGGTGGTAGTGAACTGCA+AGG + chr1.1:55642252-55642271 MS.gene004748:CDS 55.0%
! CCCTCTGGCTATGGCTCTAT+GGG + chr1.1:55642003-55642022 MS.gene004748:CDS 55.0%
! GCACCAGGATTGGCATCCTT+TGG - chr1.1:55641625-55641644 None:intergenic 55.0%
! GCAGGTGGATTCCCACCTTA+TGG + chr1.1:55641781-55641800 MS.gene004748:CDS 55.0%
! GGGTATGGTTCGGCTAGCAA+TGG + chr1.1:55641835-55641854 MS.gene004748:CDS 55.0%
! TCCCTCTGGCTATGGCTCTA+TGG + chr1.1:55642002-55642021 MS.gene004748:CDS 55.0%
!! ACGGTGCTGCTGCTGGATAT+GGG + chr1.1:55641815-55641834 MS.gene004748:CDS 55.0%
!! ATGCAGCCTCAAAGTGCTGC+AGG + chr1.1:55641763-55641782 MS.gene004748:CDS 55.0%
!! GCTGGTTATGGTGGTGGCTA+TGG + chr1.1:55642414-55642433 MS.gene004748:CDS 55.0%
!! GGTTATGGTGGTGGCTATGG+TGG + chr1.1:55642417-55642436 MS.gene004748:CDS 55.0%
!! TACGGTGCTGCTGCTGGATA+TGG + chr1.1:55641814-55641833 MS.gene004748:CDS 55.0%
AGCAGCAGCACCGTAAGCAG+AGG - chr1.1:55641809-55641828 None:intergenic 60.0%
CACCTCCAGCACCACCCATA+CGG - chr1.1:55641654-55641673 None:intergenic 60.0%
CCAGATCCAGCACCACCACT+TGG - chr1.1:55642057-55642076 None:intergenic 60.0%
CCAGTGCAGCGGCTGGATAT+GGG + chr1.1:55642100-55642119 MS.gene004748:CDS 60.0%
CCATATCCAGCCGCTGCACT+GGG - chr1.1:55642102-55642121 None:intergenic 60.0%
GCTGTTGGGCTTGTCGAGAC+TGG - chr1.1:55642446-55642465 None:intergenic 60.0%
GGACTCCTCAGGGAAATGGG+GGG + chr1.1:55642388-55642407 MS.gene004748:CDS 60.0%
GGATCTGGTGCAGCAACTGC+AGG + chr1.1:55642069-55642088 MS.gene004748:CDS 60.0%
GGGACTCCTCAGGGAAATGG+GGG + chr1.1:55642387-55642406 MS.gene004748:CDS 60.0%
GGGCAAGCTGGTTATGGTGG+TGG + chr1.1:55642408-55642427 MS.gene004748:CDS 60.0%
GGGTATGGTGGTTATGGCGG+CGG + chr1.1:55642135-55642154 MS.gene004748:CDS 60.0%
GGTATGGTGGTTATGGCGGC+GGG + chr1.1:55642136-55642155 MS.gene004748:CDS 60.0%
GGTTCGGCTAGCAATGGCCT+TGG + chr1.1:55641841-55641860 MS.gene004748:CDS 60.0%
GTGGTGGCCCAAGGAGTTCA+TGG + chr1.1:55641968-55641987 MS.gene004748:CDS 60.0%
! CCAAGTGGTGGTGCTGGATC+TGG + chr1.1:55642054-55642073 MS.gene004748:CDS 60.0%
! CTGCAAGGTAGTGGTGGCAG+TGG + chr1.1:55642267-55642286 MS.gene004748:CDS 60.0%
! GTGCTGTTGGTGGGCGTACT+GGG + chr1.1:55642202-55642221 MS.gene004748:CDS 60.0%
!! AGTTATGGTGGTGCCGCTGC+TGG + chr1.1:55641883-55641902 MS.gene004748:CDS 60.0%
!! CAGCCTCAAAGTGCTGCAGG+TGG + chr1.1:55641766-55641785 MS.gene004748:CDS 60.0%
!! CTTATGCTGGTGGTGGCCCA+AGG + chr1.1:55641959-55641978 MS.gene004748:CDS 60.0%
!! GGAGGTGGTAGTGGCGGAAT+GGG + chr1.1:55641667-55641686 MS.gene004748:CDS 60.0%
!! TCTGCTTACGGTGCTGCTGC+TGG + chr1.1:55641808-55641827 MS.gene004748:CDS 60.0%
!! TGGAGGTGGTAGTGGCGGAA+TGG + chr1.1:55641666-55641685 MS.gene004748:CDS 60.0%
CAATCTCCCAGTGCAGCGGC+TGG + chr1.1:55642093-55642112 MS.gene004748:CDS 65.0%
CAGGGAAATGGGGGGCAAGC+TGG + chr1.1:55642396-55642415 MS.gene004748:CDS 65.0%
CCCAGTGCAGCGGCTGGATA+TGG + chr1.1:55642099-55642118 MS.gene004748:CDS 65.0%
CCCATATCCAGCCGCTGCAC+TGG - chr1.1:55642103-55642122 None:intergenic 65.0%
GCTCAGGCTCCCTCTGGCTA+TGG + chr1.1:55641994-55642013 MS.gene004748:CDS 65.0%
GCTTGCCCCCCATTTCCCTG+AGG - chr1.1:55642396-55642415 None:intergenic 65.0%
GGGGGGCAAGCTGGTTATGG+TGG + chr1.1:55642405-55642424 MS.gene004748:CDS 65.0%
GGTGGTTATGGCGGCGGGTA+TGG + chr1.1:55642141-55642160 MS.gene004748:CDS 65.0%
GGTTATGGCGGCGGGTATGG+TGG + chr1.1:55642144-55642163 MS.gene004748:CDS 65.0%
TAGCCAGAGGGAGCCTGAGC+AGG - chr1.1:55641994-55642013 None:intergenic 65.0%
TGGAGGGTTGCCTCCCACTC+TGG + chr1.1:55641405-55641424 MS.gene004748:CDS 65.0%
! AGCCGTATGGGTGGTGCTGG+AGG + chr1.1:55641649-55641668 MS.gene004748:CDS 65.0%
! CCACCACTTGGAGCACCCCA+AGG - chr1.1:55642045-55642064 None:intergenic 65.0%
! CCTTGGGGTGCTCCAAGTGG+TGG + chr1.1:55642042-55642061 MS.gene004748:CDS 65.0%
! CGTATGGGTGGTGCTGGAGG+TGG + chr1.1:55641652-55641671 MS.gene004748:CDS 65.0%
! GCTCCTTGGGGTGCTCCAAG+TGG + chr1.1:55642039-55642058 MS.gene004748:CDS 65.0%
! GGTGCTCCAAGTGGTGGTGC+TGG + chr1.1:55642048-55642067 MS.gene004748:CDS 65.0%
! GGTGGTGCTGGAGGTGGTAG+TGG + chr1.1:55641658-55641677 MS.gene004748:CDS 65.0%
!! GGTGCCGCTGCTGGTTATGG+TGG + chr1.1:55641892-55641911 MS.gene004748:CDS 65.0%
!! GGTGCTGGAGGTGGTAGTGG+CGG + chr1.1:55641661-55641680 MS.gene004748:CDS 65.0%
!! GGTGCTGTTGGTGGGCGTAC+TGG + chr1.1:55642201-55642220 MS.gene004748:CDS 65.0%
!! GGTGGTAGTGGCGGAATGGG+TGG + chr1.1:55641670-55641689 MS.gene004748:CDS 65.0%
!! GGTGGTGCCGCTGCTGGTTA+TGG + chr1.1:55641889-55641908 MS.gene004748:CDS 65.0%
TGGCCTGCTCAGGCTCCCTC+TGG + chr1.1:55641988-55642007 MS.gene004748:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 55639948 55642470 55639948 ID=MS.gene004748
chr1.1 mRNA 55639948 55642470 55639948 ID=MS.gene004748.t1;Parent=MS.gene004748
chr1.1 exon 55639948 55640169 55639948 ID=MS.gene004748.t1.exon1;Parent=MS.gene004748.t1
chr1.1 CDS 55639948 55640169 55639948 ID=cds.MS.gene004748.t1;Parent=MS.gene004748.t1
chr1.1 exon 55641292 55642470 55641292 ID=MS.gene004748.t1.exon2;Parent=MS.gene004748.t1
chr1.1 CDS 55641292 55642470 55641292 ID=cds.MS.gene004748.t1;Parent=MS.gene004748.t1
Gene Sequence

>MS.gene004748

ATGGATTCGGATCAAGGAAAGCTTTTCATCGGTGGGATTTCATGGGATACGAATGAGGAGAAGCTGAAGGAGCATTTCAGCAATTATGGTGATGTTTTGAACACTTCTGTTATGAGAGAGAAGAACACTGGTAAACCTAGAGGCTTTGGTTTCGTGGTTTTCTCAGATCCTTCTGTTCTTGATAGGGTTCTTGAAGACAAACATGTTATTGATGGCAGAACGGTCGGTTTTGTTTTTTCTTTCTCATTTTCATTCAATGTTTTTTTATACCCTTTTACCTATGTTAGGGTTATGTGAATGTTTGTGTGTTTTTTTGTTTAAAAATTTGGTCTTTTTTGTTTTAGATTATTTATTCCTGTTTTTGGTTGTGAATTGGAGGTGGGTTTTGTTTTGTTTAAAGATTAAGGCTTTAATTTTGAGGGGGGTGTGTTTAGTGGTTTTCATTGTAATTTTTGTGGGTGGGGTTTGTTTTGTTCAATTGTAAAGGCTGTTATTTACTGTGTATAGTGATTTTTTTTTTTTTTTGAAATTTTTATGAGCTGTTTATCGATGGATTGATTGCGTGTTTGGTTTTCTAGGTTTTATAGCATGAGACTAATTAATTTGTTCATGGTTTGATTTGCTTAACTTGAGATAAGTTTGTCTATAACTATTGTTAGTAGATTATTGTGTAATAGAATTGAGCGGTGCGGATGCATATTCCCCTGCCTTTTGTTTGCTGTAAAAACTTTGCTAGACCTGAAAAGATTAAATGTTGCATCATTGGTTGTAGGTACATTATTTTTCCATTGTGGAATAGGTATACTAATGGATATTTTTCCATTGTGGAATAGGTATCTCCTTGGTTGTAGGTACATTAGTGACAGGATTTAAATAGATTGTATCGGATGAAAGTAAAGTATAACGTTTCACTTTGGGAGAAGATACATTGGAATATCATTAATGTTGTTTCATGTTGTTTCAAAACAATAATACCTTGTTTTCCTGAAATCCTTCTTATTGCATATATAAAGCCGAAAATATTAAATGAAACAGAAAAAGATTTTGATACGTTGATAACTTGAAAAGCATTTAATTATATTATCGCTGAGTATGTCTGCTGACATCCTTGAAGCTAGATCTGTTGTGTCAAATATATTATGTTTTCATCTTATATGTACTGTTACTTATAAGCTACATATGTTTATGACAGGTGATACTGCTACTTATAAGCTATATATATGTAATTTGAACATTTATCTGTACTTTTAAATCTGTTGTGACCCAGACCCTGTGTTTGCTTTACTTCCAGTTCCCACTATCGATTATAAGCCTAACTAGCAATGTTGTAATTTTGTTATTCAGGTTGATGCCAAGAGGGCTTTCTCAAGAGAGGACCAACCGATTTCTGTCTCTTCGAGATCTGGAAACTCCAATTCTGGGAATGGTGGAAATATGAGAACCAAAAAGATATTTGTTGGAGGGTTGCCTCCCACTCTGGCTGAAGAAAAATTCCGTCAGTACTTTGAGGCTTATGGACATGTAACTGATGTTGTAGTCATGTATGACCAAAATACTGGACGACCACGAGGATTTGGGTTTATTACTTTTGATACCGAGGAGGCAGTTGATAGGGTTTTGCACAAGACATTTCATGATTTAAATGGTAAACAAGTAGAGGTAAAGCGTGCACTCCCAAAGGATGCCAATCCTGGTGCAAATAGCCGTATGGGTGGTGCTGGAGGTGGTAGTGGCGGAATGGGTGGTTATCAAGGGTATGGAGCTTCTGGTGGAAACCAAAATGCATATGATGGTCGTTCAGATTCTAGTAGGTATATGCAGCCTCAAAGTGCTGCAGGTGGATTCCCACCTTATGGATCCTCTGCTTACGGTGCTGCTGCTGGATATGGGTATGGTTCGGCTAGCAATGGCCTTGGTTATGGTGCAGCATATGGAAGTTATGGTGGTGCCGCTGCTGGTTATGGTGGACCTGCTGCTGCAACATATGGGAACCCAAATGTCCCTAATGCTGCTTATGCTGGTGGTGGCCCAAGGAGTTCATGGCCTGCTCAGGCTCCCTCTGGCTATGGCTCTATGGGTTACGGTAACGCTGCTCCTTGGGGTGCTCCAAGTGGTGGTGCTGGATCTGGTGCAGCAACTGCAGGTCAATCTCCCAGTGCAGCGGCTGGATATGGGAATCAAGGTTACGGGTATGGTGGTTATGGCGGCGGGTATGGTGGAAGTGATAATTCTTATGGGAATCCAGGTGTATATGGTGCTGTTGGTGGGCGTACTGGGAGTGCTCCAAATAGTAATGCTAGTGGTCAGGGTGGTAGTGAACTGCAAGGTAGTGGTGGCAGTGGCAGCTATATGGGCAGTGGCTATGGGGACACAAATGGAAATTCTGGGTATGGAAATGCAGCTTGGAGATCTGAACAGGCTCAAGCATCTGGTAATTATGGGACTCCTCAGGGAAATGGGGGGCAAGCTGGTTATGGTGGTGGCTATGGTGGCGCCCAGTCTCGACAAGCCCAACAGCAGTAA
Protein sequence

>MS.gene004748.t1

MDSDQGKLFIGGISWDTNEEKLKEHFSNYGDVLNTSVMREKNTGKPRGFGFVVFSDPSVLDRVLEDKHVIDGRTVDAKRAFSREDQPISVSSRSGNSNSGNGGNMRTKKIFVGGLPPTLAEEKFRQYFEAYGHVTDVVVMYDQNTGRPRGFGFITFDTEEAVDRVLHKTFHDLNGKQVEVKRALPKDANPGANSRMGGAGGGSGGMGGYQGYGASGGNQNAYDGRSDSSRYMQPQSAAGGFPPYGSSAYGAAAGYGYGSASNGLGYGAAYGSYGGAAAGYGGPAAATYGNPNVPNAAYAGGGPRSSWPAQAPSGYGSMGYGNAAPWGAPSGGAGSGAATAGQSPSAAAGYGNQGYGYGGYGGGYGGSDNSYGNPGVYGAVGGRTGSAPNSNASGQGGSELQGSGGSGSYMGSGYGDTNGNSGYGNAAWRSEQAQASGNYGTPQGNGGQAGYGGGYGGAQSRQAQQQ