AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005250.t1 MTR_1g083250 93.265 876 55 1 1 872 1 876 0.0 1615
MS.gene005250.t1 MTR_1g083250 93.490 768 46 1 1 764 1 768 0.0 1432
MS.gene005250.t1 MTR_1g083250 92.904 606 39 1 1 602 1 606 0.0 1109
MS.gene005250.t1 MTR_3g063040 45.540 213 106 2 151 363 7 209 3.72e-51 194
MS.gene005250.t1 MTR_3g063040 33.591 259 157 5 505 760 234 480 1.09e-34 143
MS.gene005250.t1 MTR_2g042440 37.917 240 131 6 151 383 33 261 4.29e-42 165
MS.gene005250.t1 MTR_2g042440 33.503 197 115 5 506 687 266 461 8.42e-20 95.1
MS.gene005250.t1 MTR_2g042440 37.917 240 131 6 151 383 33 261 4.36e-42 165
MS.gene005250.t1 MTR_2g042440 33.503 197 115 5 506 687 266 461 8.51e-20 95.1
MS.gene005250.t1 MTR_1g083840 43.056 216 102 6 156 361 197 401 3.69e-40 157
MS.gene005250.t1 MTR_1g083840 33.945 218 119 7 474 668 383 598 9.81e-24 107
MS.gene005250.t1 MTR_5g026590 36.400 250 126 5 120 362 49 272 1.69e-37 150
MS.gene005250.t1 MTR_5g026590 36.364 165 97 4 506 668 300 458 4.68e-25 112
MS.gene005250.t1 MTR_2g006440 37.004 227 123 5 144 361 392 607 5.94e-36 147
MS.gene005250.t1 MTR_2g006440 29.730 222 124 4 468 668 605 815 1.22e-20 98.6
MS.gene005250.t1 MTR_8g080160 32.075 212 127 6 151 357 267 466 3.13e-21 100
MS.gene005250.t1 MTR_8g080160 34.595 185 99 5 506 688 496 660 8.47e-21 99.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005250.t1 AT5G27680 52.643 889 354 20 7 869 4 851 0.0 826
MS.gene005250.t1 AT5G27680 52.643 889 354 20 7 869 4 851 0.0 826
MS.gene005250.t1 AT5G27680 52.643 889 354 20 7 869 4 851 0.0 826
MS.gene005250.t1 AT5G27680 52.643 889 354 20 7 869 4 851 0.0 826
MS.gene005250.t1 AT5G27680 57.162 740 273 11 139 869 17 721 0.0 806
MS.gene005250.t1 AT5G27680 51.486 841 329 20 7 821 4 791 0.0 776
MS.gene005250.t1 AT4G35740 39.300 257 134 8 135 383 13 255 3.89e-43 168
MS.gene005250.t1 AT4G35740 35.266 207 123 6 505 705 259 460 1.31e-22 104
MS.gene005250.t1 AT3G05740 36.934 287 138 10 86 361 67 321 3.40e-41 159
MS.gene005250.t1 AT3G05740 36.508 189 113 5 481 662 320 508 3.77e-25 111
MS.gene005250.t1 AT3G05740 36.934 287 138 10 86 361 152 406 9.08e-41 159
MS.gene005250.t1 AT3G05740 36.508 189 113 5 481 662 405 593 3.19e-25 112
MS.gene005250.t1 AT1G31360 39.035 228 121 5 143 362 72 289 1.99e-40 157
MS.gene005250.t1 AT1G31360 37.725 167 92 4 506 668 317 475 4.22e-24 107
MS.gene005250.t1 AT1G31360 39.035 228 121 5 143 362 72 289 1.99e-40 157
MS.gene005250.t1 AT1G31360 37.725 167 92 4 506 668 317 475 4.22e-24 107
MS.gene005250.t1 AT1G31360 39.035 228 121 5 143 362 72 289 2.63e-40 157
MS.gene005250.t1 AT1G31360 37.725 167 92 4 506 668 317 475 5.22e-24 107
MS.gene005250.t1 AT1G31360 39.035 228 121 5 143 362 72 289 4.23e-40 157
MS.gene005250.t1 AT1G31360 37.725 167 92 4 506 668 317 475 5.32e-24 107
MS.gene005250.t1 AT1G31360 39.035 228 121 5 143 362 72 289 7.01e-40 157
MS.gene005250.t1 AT1G31360 37.725 167 92 4 506 668 317 475 4.44e-24 108
MS.gene005250.t1 AT1G31360 39.035 228 121 5 143 362 72 289 7.73e-40 158
MS.gene005250.t1 AT1G31360 37.126 167 93 4 506 668 317 475 4.29e-24 108
MS.gene005250.t1 AT1G31360 39.035 228 121 5 143 362 106 323 1.25e-39 157
MS.gene005250.t1 AT1G31360 37.126 167 93 4 506 668 351 509 5.49e-24 108
MS.gene005250.t1 AT1G10930 39.381 226 119 4 144 361 437 652 6.49e-39 157
MS.gene005250.t1 AT1G10930 30.000 220 124 5 468 668 650 858 3.39e-19 94.0
MS.gene005250.t1 AT1G31360 37.931 174 90 5 197 362 1 164 6.40e-25 110
MS.gene005250.t1 AT1G31360 37.725 167 92 4 506 668 192 350 3.24e-24 108
MS.gene005250.t1 AT1G27880 37.013 154 92 4 151 301 260 411 1.31e-23 107
MS.gene005250.t1 AT1G27880 30.698 215 126 4 478 690 460 653 3.34e-21 100
MS.gene005250.t1 AT1G27880 37.013 154 92 4 151 301 260 411 1.40e-23 107
MS.gene005250.t1 AT1G27880 40.000 130 76 1 478 605 460 589 3.76e-21 100
MS.gene005250.t1 AT4G35740 35.437 206 122 6 506 705 167 367 8.84e-23 104
MS.gene005250.t1 AT4G35740 36.207 174 93 6 218 384 1 163 8.97e-21 98.2

Find 192 sgRNAs with CRISPR-Local

Find 414 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCCTCTTTCTTTGCTTTC+TGG 0.029749 1.4:+67308920 None:intergenic
TCATGTTGTCTGATTGTTTC+AGG 0.167882 1.4:-67310636 MS.gene005250:intron
GGAATCAGTGCTTGCTTTCT+TGG 0.174833 1.4:-67313942 MS.gene005250:CDS
AGGTACATTGTGTTTCTAAA+TGG 0.200952 1.4:-67313660 MS.gene005250:CDS
CTCCTCTTTCTTTGCTTTCT+GGG 0.202932 1.4:+67308921 None:intergenic
GAGAGGCCTTACTCGAATTT+TGG 0.206454 1.4:-67309466 MS.gene005250:CDS
AATTCTCACTGTATCCTTTC+TGG 0.206916 1.4:+67311886 None:intergenic
CGACGTTAGTTAGAAGTATA+AGG 0.213670 1.4:-67309647 MS.gene005250:CDS
CAGATTCCTGCATTGTTAAC+TGG 0.214970 1.4:-67314035 MS.gene005250:CDS
CCGACCTAATTTACGCTTCA+TGG 0.222789 1.4:-67313205 MS.gene005250:intron
CATGAATTGATTAAAGTATA+TGG 0.229820 1.4:-67313047 MS.gene005250:CDS
TGCTTAAAGCTAACAAAATA+TGG 0.257399 1.4:-67313963 MS.gene005250:CDS
TGGAAGCTAAAGGATATATC+AGG 0.276706 1.4:-67309446 MS.gene005250:CDS
GACCAGCCCGTCCAGCTTCT+TGG 0.276926 1.4:+67310935 None:intergenic
AGTGCTTGCTTTCTTGGCTC+TGG 0.283584 1.4:-67313936 MS.gene005250:CDS
TCAAGTAACATATCTGCTTC+AGG 0.308163 1.4:+67309068 None:intergenic
AAAATTGACAATTGAGTTCC+TGG 0.308786 1.4:-67312850 MS.gene005250:CDS
TACTACTGGATTGAAAATAA+TGG 0.314501 1.4:+67314789 None:intergenic
TCGTGCATTAGGCTTATTAA+AGG 0.317600 1.4:+67313990 None:intergenic
GTTTCATGAAAATACTTTAG+AGG 0.319856 1.4:-67311440 MS.gene005250:intron
AAATATTAGACATACATTTC+GGG 0.325549 1.4:+67310047 None:intergenic
CTGGGGCTCTGCCGCTTTGT+TGG 0.334900 1.4:+67308939 None:intergenic
TTAAGCATTGATCGTGCATT+AGG 0.345019 1.4:+67313979 None:intergenic
AATTTCAGAAATGGTTGAAA+TGG 0.346216 1.4:-67315026 MS.gene005250:CDS
GTAGCTGTCAATGCCATTAC+AGG 0.346440 1.4:+67313309 None:intergenic
GTCCTGGCTGCAACTGGATC+TGG 0.352110 1.4:-67314521 MS.gene005250:intron
TGTCTTGTCCTGGCTGCAAC+TGG 0.355697 1.4:-67314527 MS.gene005250:CDS
TTCTATCCTTGGAATTGAAA+TGG 0.358591 1.4:+67309694 None:intergenic
GGTACATTGTGTTTCTAAAT+GGG 0.363382 1.4:-67313659 MS.gene005250:CDS
CAAAATCACTTCCAAGTAAT+GGG 0.371133 1.4:-67314874 MS.gene005250:CDS
CAAAATGCTTAAGGAGCCTT+TGG 0.374962 1.4:-67311939 MS.gene005250:CDS
ATCAGAAGCACCAGAGCTAA+TGG 0.378965 1.4:+67312980 None:intergenic
ATGGGATTTGATCATGATTC+CGG 0.381282 1.4:-67314683 MS.gene005250:CDS
AACCTAGTTCTGTTAGTTCC+GGG 0.382236 1.4:+67309135 None:intergenic
TTTCCCATTGACTTTACTAC+TGG 0.382348 1.4:+67314775 None:intergenic
CAGCCGACTGTCTGCATTGA+GGG 0.386843 1.4:-67313376 MS.gene005250:CDS
AACCTGATTTGAGGACTTCT+CGG 0.388639 1.4:-67308884 MS.gene005250:CDS
CTCAGATAACTCACATTGCT+TGG 0.392448 1.4:+67311997 None:intergenic
CTCACCATGAAGCGTAAATT+AGG 0.393071 1.4:+67313201 None:intergenic
AAACCTAGTTCTGTTAGTTC+CGG 0.393315 1.4:+67309134 None:intergenic
TTTCGATGTTGCATCTGATT+GGG 0.396900 1.4:-67314648 MS.gene005250:CDS
GGAGCAAGTAATTTCAGAAA+TGG 0.397883 1.4:-67315035 MS.gene005250:CDS
ATTTCAGAAATGGTTGAAAT+GGG 0.400700 1.4:-67315025 MS.gene005250:CDS
CGCAACAATTGCGTTTGGAA+TGG 0.401303 1.4:-67311184 MS.gene005250:CDS
GTGCTTGCTTTCTTGGCTCT+GGG 0.414131 1.4:-67313935 MS.gene005250:CDS
TTTAGAGCTTTCCCATTACT+TGG 0.421127 1.4:+67314863 None:intergenic
ATTTCGATGTTGCATCTGAT+TGG 0.422496 1.4:-67314649 MS.gene005250:CDS
GCAACAATTGCGTTTGGAAT+GGG 0.425033 1.4:-67311183 MS.gene005250:CDS
TAGCTTCCAAAATTCGAGTA+AGG 0.426091 1.4:+67309460 None:intergenic
GTTCTCCTCATTCTCAGAAT+GGG 0.429453 1.4:-67309027 MS.gene005250:CDS
AGTCCTTCTTAGATGTAACT+TGG 0.431411 1.4:+67311471 None:intergenic
CCGTCCAGCTTCTTGGTAGT+AGG 0.435309 1.4:+67310942 None:intergenic
CCCCATCATCACAGTCATCT+TGG 0.437207 1.4:+67312922 None:intergenic
AGACGCTGACGACGGATCTC+AGG 0.437866 1.4:+67308987 None:intergenic
TCTCGACTTTGGAACTTGAA+TGG 0.438663 1.4:+67314820 None:intergenic
CAATCCAGTAGTAAAGTCAA+TGG 0.441032 1.4:-67314779 MS.gene005250:CDS
CCCCGAGAAGTCCTCAAATC+AGG 0.441620 1.4:+67308882 None:intergenic
TTGCTCCGAAGATTTGTTGT+TGG 0.441849 1.4:+67315051 None:intergenic
AAAGTGATGGCTTCCTTGCT+AGG 0.443758 1.4:+67310701 None:intergenic
AGATGCGATGTGTGCAATAA+TGG 0.445535 1.4:-67310132 MS.gene005250:CDS
CGTTCTCCTCATTCTCAGAA+TGG 0.446289 1.4:-67309028 MS.gene005250:CDS
ACCTGATTTGAGGACTTCTC+GGG 0.446808 1.4:-67308883 MS.gene005250:CDS
ACAAAATCACTTCCAAGTAA+TGG 0.450769 1.4:-67314875 MS.gene005250:CDS
TGGTTGATCGTTCTCGACTT+TGG 0.452375 1.4:+67314809 None:intergenic
TACAGGTATATCGAATTTCA+AGG 0.452985 1.4:+67313326 None:intergenic
GTTGTCGCAACAATTGCGTT+TGG 0.453299 1.4:-67311189 MS.gene005250:CDS
AGATTCCTGCATTGTTAACT+GGG 0.455469 1.4:-67314034 MS.gene005250:CDS
GCCAAGTATCTCTGCAAGTC+TGG 0.455654 1.4:-67311863 MS.gene005250:CDS
CTCAGAATGGGGAAAAGGTT+GGG 0.456103 1.4:-67309015 MS.gene005250:CDS
GAAATTCGATATACCTGTAA+TGG 0.458052 1.4:-67313322 MS.gene005250:CDS
TCCTCTTTCTTTGCTTTCTG+GGG 0.458472 1.4:+67308922 None:intergenic
GATGGCCTTTCCATTAGCTC+TGG 0.464996 1.4:-67312990 MS.gene005250:CDS
GAAAGAGTCCTTACCGCGAA+TGG 0.465084 1.4:-67314702 MS.gene005250:CDS
GACGTTAGTTAGAAGTATAA+GGG 0.466199 1.4:-67309646 MS.gene005250:CDS
GCCCCAGAAAGCAAAGAAAG+AGG 0.467262 1.4:-67308923 MS.gene005250:CDS
AAGATATGCTCCACAACGCT+TGG 0.467897 1.4:+67314950 None:intergenic
AATTCCAAGGATAGAAAACT+AGG 0.471075 1.4:-67309687 MS.gene005250:CDS
TCATTCTCAGAATGGGGAAA+AGG 0.471946 1.4:-67309020 MS.gene005250:CDS
GCTGGACGGGCTGGTCGAGA+TGG 0.473557 1.4:-67310928 MS.gene005250:CDS
GGAACTAACAGAACTAGGTT+TGG 0.477458 1.4:-67309132 MS.gene005250:CDS
CTTTCAAAGTGCGGATGACT+TGG 0.477834 1.4:-67312811 MS.gene005250:CDS
ATGGATATCATCATTATATG+AGG 0.479246 1.4:+67309713 None:intergenic
TTGAGGGAAAATTTCACTAC+TGG 0.479678 1.4:-67313360 MS.gene005250:CDS
CAAGTAACATATCTGCTTCA+GGG 0.482660 1.4:+67309069 None:intergenic
TCTCACTGTATCCTTTCTGG+TGG 0.485281 1.4:+67311889 None:intergenic
AGAAGGAAGCTCTCTCTGCT+TGG 0.486781 1.4:-67314565 MS.gene005250:CDS
ATAGAAAGTTTCTTCAGTCA+TGG 0.489291 1.4:+67309097 None:intergenic
ACCAGACTTGCAGAGATACT+TGG 0.491446 1.4:+67311862 None:intergenic
AACCAAGATGACTGTGATGA+TGG 0.492702 1.4:-67312924 MS.gene005250:CDS
ATCAAATCCCATTCGCGGTA+AGG 0.496454 1.4:+67314694 None:intergenic
TCATAGAGATTGTCTTGTCC+TGG 0.498304 1.4:-67314537 MS.gene005250:CDS
AAAATAACAAACCTGTAAGC+TGG 0.501500 1.4:+67313622 None:intergenic
TACCAAGAAGCTGGACGGGC+TGG 0.501960 1.4:-67310937 MS.gene005250:CDS
TCAGATAACTCACATTGCTT+GGG 0.503093 1.4:+67311998 None:intergenic
TTCGATGTTGCATCTGATTG+GGG 0.505199 1.4:-67314647 MS.gene005250:CDS
CTTAAGGAGCCTTTGGAACA+AGG 0.507291 1.4:-67311932 MS.gene005250:CDS
TCTCAGAATGGGGAAAAGGT+TGG 0.507588 1.4:-67309016 MS.gene005250:CDS
AACTCACATTGCTTGGGAGG+AGG 0.508673 1.4:+67312004 None:intergenic
TCAGGCACGTAGCTGTTCCA+TGG 0.509554 1.4:-67309739 MS.gene005250:intron
GGATTCCAACAACAAATCTT+CGG 0.511479 1.4:-67315056 MS.gene005250:CDS
CAGTGTTTCTTCTTATGATG+TGG 0.514916 1.4:-67312952 MS.gene005250:CDS
TTTGTAACATGGGTAGTGGT+TGG 0.515431 1.4:+67314893 None:intergenic
CTAACTAACGTCGTAAGACT+TGG 0.515548 1.4:+67309657 None:intergenic
AGTTAGAAGTATAAGGGAGC+AGG 0.515729 1.4:-67309640 MS.gene005250:intron
ATCATTATATGAGGAATCCA+TGG 0.518899 1.4:+67309722 None:intergenic
AAAGAGTCCTTACCGCGAAT+GGG 0.522280 1.4:-67314701 MS.gene005250:CDS
GTGGGTACATATATAATTGT+CGG 0.525076 1.4:+67311908 None:intergenic
CTGGACGGGCTGGTCGAGAT+GGG 0.526400 1.4:-67310927 MS.gene005250:CDS
TGATATCCATTTCAATTCCA+AGG 0.529380 1.4:-67309700 MS.gene005250:CDS
AATCCAGTAGTAAAGTCAAT+GGG 0.530343 1.4:-67314778 MS.gene005250:CDS
TTTACTGCAAACTATAATGC+GGG 0.533067 1.4:-67310070 MS.gene005250:CDS
CTACTACCAAGAAGCTGGAC+GGG 0.535795 1.4:-67310941 MS.gene005250:CDS
CTACGACTTGGCAAAAGTGA+TGG 0.536192 1.4:+67310688 None:intergenic
CCATACCTTAGGATAGTCTC+TGG 0.536706 1.4:+67313849 None:intergenic
TTCTATATGCAAACCTAGCA+AGG 0.537574 1.4:-67310714 MS.gene005250:CDS
TCTCGAAGCAATAAAAGTAG+TGG 0.549601 1.4:-67314984 MS.gene005250:CDS
GAAGCCTACTACCAAGAAGC+TGG 0.550306 1.4:-67310946 MS.gene005250:CDS
TCAAAGACTGAATCTAAAAG+AGG 0.550557 1.4:-67310103 MS.gene005250:CDS
ACCAAGATGACTGTGATGAT+GGG 0.551092 1.4:-67312923 MS.gene005250:CDS
TGCCCAAGTTACATCTAAGA+AGG 0.551742 1.4:-67311474 MS.gene005250:CDS
AACCAGATCCAGTTGCAGCC+AGG 0.555299 1.4:+67314519 None:intergenic
TGCATTGTTAACTGGGAAAG+TGG 0.558684 1.4:-67314027 MS.gene005250:CDS
AATCCACTACGGTTGGCCGC+AGG 0.559976 1.4:-67311133 MS.gene005250:intron
CTCACTGTATCCTTTCTGGT+GGG 0.560064 1.4:+67311890 None:intergenic
GATAACTCACATTGCTTGGG+AGG 0.562034 1.4:+67312001 None:intergenic
ATATCTTCACTTCTACGACT+TGG 0.562805 1.4:+67310676 None:intergenic
TTTAGATTCAGTCTTTGAGG+TGG 0.563062 1.4:+67310108 None:intergenic
CAAAGTGCGGATGACTTGGA+TGG 0.563076 1.4:-67312807 MS.gene005250:intron
GAAGAATAATCCACTACGGT+TGG 0.564141 1.4:-67311140 MS.gene005250:CDS
ACTTTCCCAGTTAACAATGC+AGG 0.564953 1.4:+67314029 None:intergenic
TCCTTCGATTCCAAGCGTTG+TGG 0.567197 1.4:-67314960 MS.gene005250:CDS
ATTGTCGGTCCTTGTTCCAA+AGG 0.568819 1.4:+67311923 None:intergenic
GAATTGATTAAAGTATATGG+TGG 0.569477 1.4:-67313044 MS.gene005250:CDS
TCCACAACGCTTGGAATCGA+AGG 0.570560 1.4:+67314959 None:intergenic
TAAAGCATAGTAGAACATCA+TGG 0.571641 1.4:-67313091 MS.gene005250:CDS
TATATATGTACCCACCAGAA+AGG 0.572245 1.4:-67311900 MS.gene005250:CDS
ATCGAAATCATTAGCTACAC+CGG 0.574129 1.4:+67314664 None:intergenic
GTTTCTTCTTATGATGTGGA+CGG 0.577423 1.4:-67312948 MS.gene005250:CDS
TCAGCCGACTGTCTGCATTG+AGG 0.577541 1.4:-67313377 MS.gene005250:intron
AGACCTGCGGCCAACCGTAG+TGG 0.579404 1.4:+67311130 None:intergenic
AAGATACTTGTAGAATACTT+CGG 0.579525 1.4:-67310507 MS.gene005250:CDS
AAGGCTGCCGCTTATAACGC+AGG 0.580310 1.4:-67311836 MS.gene005250:CDS
TGCTTTGTTTGCAATTGATG+AGG 0.581407 1.4:-67313680 MS.gene005250:CDS
GTCCTTCTTAGATGTAACTT+GGG 0.582146 1.4:+67311472 None:intergenic
TACCCGGAACTAACAGAACT+AGG 0.583428 1.4:-67309137 MS.gene005250:CDS
AAAGCATAGTAGAACATCAT+GGG 0.589015 1.4:-67313090 MS.gene005250:CDS
GGAAGCTAAAGGATATATCA+GGG 0.589070 1.4:-67309445 MS.gene005250:CDS
TCATGATCAAATCCCATTCG+CGG 0.589863 1.4:+67314689 None:intergenic
GATATAAATGTAATGCACTC+AGG 0.592782 1.4:-67312900 MS.gene005250:CDS
CTTCCACATCATCATCATCA+AGG 0.593475 1.4:+67314735 None:intergenic
TCTCTGCAAGTCTGGTGTGA+AGG 0.595301 1.4:-67311855 MS.gene005250:CDS
AATTGATTAAAGTATATGGT+GGG 0.597141 1.4:-67313043 MS.gene005250:CDS
CTCGAAGCAATAAAAGTAGT+GGG 0.600213 1.4:-67314983 MS.gene005250:CDS
GTACATTGTGTTTCTAAATG+GGG 0.602708 1.4:-67313658 MS.gene005250:CDS
TTGTACACAAAATTCACCAC+AGG 0.602837 1.4:+67312027 None:intergenic
GTTTCAGCAAGCTTCTGCAA+CGG 0.604188 1.4:+67313712 None:intergenic
GCTAAAGGATATATCAGGGA+AGG 0.604478 1.4:-67309441 MS.gene005250:CDS
TGCAAACAAAGCAATACCAC+GGG 0.604790 1.4:+67313690 None:intergenic
TTTCCCTCAATGCAGACAGT+CGG 0.608473 1.4:+67313373 None:intergenic
TTCTCCTCATTCTCAGAATG+GGG 0.612620 1.4:-67309026 MS.gene005250:CDS
TTCACCTCAGATGATGCAGA+TGG 0.613831 1.4:-67313008 MS.gene005250:CDS
GTTAGAAGAATAATCCACTA+CGG 0.623578 1.4:-67311144 MS.gene005250:CDS
CATTCTGAGAATGAGGAGAA+CGG 0.627106 1.4:+67309029 None:intergenic
CCTACTACCAAGAAGCTGGA+CGG 0.627834 1.4:-67310942 MS.gene005250:CDS
AAGACTGAATCTAAAAGAGG+AGG 0.628463 1.4:-67310100 MS.gene005250:CDS
AAATGTTCAGATAAAATACC+CGG 0.629923 1.4:-67309153 MS.gene005250:CDS
CCATGAAGCGTAAATTAGGT+CGG 0.630557 1.4:+67313205 None:intergenic
TCATACCCCTGCGTTATAAG+CGG 0.630837 1.4:+67311829 None:intergenic
TGATGATGTGGAAGAGCATG+AGG 0.631721 1.4:-67314726 MS.gene005250:CDS
TTTGTCCAGAGACTATCCTA+AGG 0.634428 1.4:-67313854 MS.gene005250:intron
AAGGCCATCTGCATCATCTG+AGG 0.634518 1.4:+67313004 None:intergenic
AGGATAGAAAACTAGGAGAG+AGG 0.636053 1.4:-67309680 MS.gene005250:CDS
ACTGATATACTGTGGTGGAG+AGG 0.640376 1.4:-67309483 MS.gene005250:CDS
CAGAAGCTTGCTGAAACCCG+TGG 0.645472 1.4:-67313706 MS.gene005250:CDS
GTTGAAAAGAAAGCAATGAG+AGG 0.646039 1.4:-67313897 MS.gene005250:CDS
TCGATGTTGCATCTGATTGG+GGG 0.651550 1.4:-67314646 MS.gene005250:CDS
AAGCACCAGAGCTAATGGAA+AGG 0.652085 1.4:+67312985 None:intergenic
AGGCTGCCGCTTATAACGCA+GGG 0.652548 1.4:-67311835 MS.gene005250:CDS
TTGCAAACAAAGCAATACCA+CGG 0.658635 1.4:+67313689 None:intergenic
TAACCACTGATATACTGTGG+TGG 0.659386 1.4:-67309488 MS.gene005250:CDS
TGTCCTTGATGATGATGATG+TGG 0.664053 1.4:-67314738 MS.gene005250:CDS
GTAATGCACTCAGGAAACAC+CGG 0.665620 1.4:-67312891 MS.gene005250:CDS
CCAAGATGACTGTGATGATG+GGG 0.667414 1.4:-67312922 MS.gene005250:CDS
TATCAGGGAAGGAGATGACA+AGG 0.676549 1.4:-67309430 MS.gene005250:intron
ATTGTTAACTGGGAAAGTGG+TGG 0.681306 1.4:-67314024 MS.gene005250:CDS
TCTCCACCACAGTATATCAG+TGG 0.686584 1.4:+67309485 None:intergenic
ACTTGTAGAATACTTCGGAG+AGG 0.689514 1.4:-67310502 MS.gene005250:CDS
CCTGATTTGAGGACTTCTCG+GGG 0.692396 1.4:-67308882 MS.gene005250:CDS
TCTTAACCACTGATATACTG+TGG 0.694390 1.4:-67309491 MS.gene005250:CDS
TCGATAGAAATCCAACAAAG+CGG 0.694722 1.4:-67308950 MS.gene005250:CDS
GGCTGCCGCTTATAACGCAG+GGG 0.706588 1.4:-67311834 MS.gene005250:intron
TGTTGATGTCTTTCAAAGTG+CGG 0.708375 1.4:-67312820 MS.gene005250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CCAAAAAATAAAATAAATAA+TGG + chr1.4:67311596-67311615 None:intergenic 10.0%
!!! AAAAGAATTTTTTTAAAACT+TGG + chr1.4:67312899-67312918 None:intergenic 10.0%
!!! AAAGAATTTTTTTAAAACTT+GGG + chr1.4:67312898-67312917 None:intergenic 10.0%
!!! AATTTTAATATCAATATACA+AGG + chr1.4:67314534-67314553 None:intergenic 10.0%
!!! ATTACATGTAAAAATATTTT+AGG + chr1.4:67312929-67312948 None:intergenic 10.0%
!!! CCATTATTTATTTTATTTTT+TGG - chr1.4:67311593-67311612 MS.gene005250:intron 10.0%
!!! TTCTTTATTTTCAATTATTT+TGG - chr1.4:67312258-67312277 MS.gene005250:intron 10.0%
!! AAAATATTAGACATACATTT+CGG + chr1.4:67313866-67313885 None:intergenic 15.0%
!! AAAGTTTCAAAATGATAAAT+TGG - chr1.4:67314043-67314062 MS.gene005250:CDS 15.0%
!! ATAAACAATGAATAAATAGA+AGG + chr1.4:67310317-67310336 None:intergenic 15.0%
!! ATGGTTAATAAATAATAAGT+TGG - chr1.4:67309639-67309658 MS.gene005250:intron 15.0%
!! ATTTAACACTAACATAATAT+CGG + chr1.4:67313332-67313351 None:intergenic 15.0%
!! GAGTACATATATTAATATTA+GGG - chr1.4:67311288-67311307 MS.gene005250:intron 15.0%
!! TAAACAATGAATAAATAGAA+GGG + chr1.4:67310316-67310335 None:intergenic 15.0%
!! TGAGTACATATATTAATATT+AGG - chr1.4:67311287-67311306 MS.gene005250:intron 15.0%
!! TGGTTAATAAATAATAAGTT+GGG - chr1.4:67309640-67309659 MS.gene005250:intron 15.0%
!!! AAATTCAACATCTTTTTAAA+TGG - chr1.4:67309461-67309480 MS.gene005250:CDS 15.0%
!!! GTTGAATTTAAAATACAAAA+AGG + chr1.4:67313562-67313581 None:intergenic 15.0%
!!! TGTAGTATAATTTTTATCTT+GGG - chr1.4:67313037-67313056 MS.gene005250:CDS 15.0%
!!! TGTCATTTTTTTTTAACATT+CGG - chr1.4:67311644-67311663 MS.gene005250:intron 15.0%
!!! TTTATATTTTGAATGAATCA+GGG - chr1.4:67312141-67312160 MS.gene005250:intron 15.0%
!!! TTTTATTATTTGAATTAACG+TGG - chr1.4:67312605-67312624 MS.gene005250:intron 15.0%
!! AAACATATCATACTTACAAA+TGG + chr1.4:67310491-67310510 None:intergenic 20.0%
!! AAATATTAGACATACATTTC+GGG + chr1.4:67313865-67313884 None:intergenic 20.0%
!! AAGAAATTGAACTCATAAAT+TGG + chr1.4:67312407-67312426 None:intergenic 20.0%
!! AATACTTCAAATTTATATGC+TGG - chr1.4:67312644-67312663 MS.gene005250:intron 20.0%
!! AATTGATTAAAGTATATGGT+GGG - chr1.4:67310866-67310885 MS.gene005250:intron 20.0%
!! AGTCATTTATTAATTCATGT+TGG - chr1.4:67313714-67313733 MS.gene005250:CDS 20.0%
!! ATAAACAAGGTAATTTGATA+CGG + chr1.4:67313592-67313611 None:intergenic 20.0%
!! ATTATCAAAAAACACATTTG+AGG - chr1.4:67311460-67311479 MS.gene005250:CDS 20.0%
!! ATTTAAAAAGTTGTCGAATT+TGG - chr1.4:67309727-67309746 MS.gene005250:CDS 20.0%
!! CAATTATAATTGATTATGTC+AGG + chr1.4:67312825-67312844 None:intergenic 20.0%
!! CATGAATTGATTAAAGTATA+TGG - chr1.4:67310862-67310881 MS.gene005250:intron 20.0%
!! TAATATCAATATACAAGGAT+AGG + chr1.4:67314529-67314548 None:intergenic 20.0%
!! TAGAATAAATACACAAACAA+AGG + chr1.4:67310462-67310481 None:intergenic 20.0%
!!! AATTTTTGGTACAATAAACA+AGG + chr1.4:67313605-67313624 None:intergenic 20.0%
!!! ATTAGGGTAAACAATTATTT+TGG - chr1.4:67311304-67311323 MS.gene005250:intron 20.0%
!!! CATGTAATTTTATTAGAGTT+TGG - chr1.4:67312941-67312960 MS.gene005250:CDS 20.0%
!!! CTGTAGTATAATTTTTATCT+TGG - chr1.4:67313036-67313055 MS.gene005250:CDS 20.0%
!!! GTTTATATTTTGAATGAATC+AGG - chr1.4:67312140-67312159 MS.gene005250:intron 20.0%
!!! TGTGTTTTTTGATAATCTTT+TGG + chr1.4:67311456-67311475 None:intergenic 20.0%
! AAAAAGACTCAAAATGCTTA+AGG - chr1.4:67311961-67311980 MS.gene005250:CDS 25.0%
! AAATGTTCAGATAAAATACC+CGG - chr1.4:67314756-67314775 MS.gene005250:CDS 25.0%
! AAGATACTTGTAGAATACTT+CGG - chr1.4:67313402-67313421 MS.gene005250:intron 25.0%
! AATTTCAGAAATGGTTGAAA+TGG - chr1.4:67308883-67308902 MS.gene005250:CDS 25.0%
! AATTTGAACACTAGAAATCT+AGG - chr1.4:67309598-67309617 MS.gene005250:intron 25.0%
! AGGTGAGTAATAGATATATT+TGG + chr1.4:67309669-67309688 None:intergenic 25.0%
! ATAAGCTAATGCAATAAACA+AGG + chr1.4:67313629-67313648 None:intergenic 25.0%
! ATAATAGAACAAAACCCATT+TGG + chr1.4:67311726-67311745 None:intergenic 25.0%
! ATATAGAACTGGTTGAAAAT+GGG + chr1.4:67313183-67313202 None:intergenic 25.0%
! ATGGATATCATCATTATATG+AGG + chr1.4:67314199-67314218 None:intergenic 25.0%
! ATTTCAGAAATGGTTGAAAT+GGG - chr1.4:67308884-67308903 MS.gene005250:CDS 25.0%
! CCAACAAATCAATTAATCTT+AGG + chr1.4:67310404-67310423 None:intergenic 25.0%
! CTACTTATTATGTGAATCAA+AGG + chr1.4:67313121-67313140 None:intergenic 25.0%
! CTTTGATTCACATAATAAGT+AGG - chr1.4:67313119-67313138 MS.gene005250:intron 25.0%
! GAATTGATTAAAGTATATGG+TGG - chr1.4:67310865-67310884 MS.gene005250:intron 25.0%
! GGTTAATTAAGTCAAGTTAA+TGG + chr1.4:67309555-67309574 None:intergenic 25.0%
! GTTAATCGCATTTAAATCTA+TGG - chr1.4:67309620-67309639 MS.gene005250:intron 25.0%
! GTTTCATGAAAATACTTTAG+AGG - chr1.4:67312469-67312488 MS.gene005250:intron 25.0%
! TAATAGAACAAAACCCATTT+GGG + chr1.4:67311725-67311744 None:intergenic 25.0%
! TACTACTGGATTGAAAATAA+TGG + chr1.4:67309123-67309142 None:intergenic 25.0%
! TATCTTGTGGTTGTATTTAT+TGG - chr1.4:67313674-67313693 MS.gene005250:CDS 25.0%
! TATTTGAAAAAAAAGACCTG+CGG + chr1.4:67312795-67312814 None:intergenic 25.0%
! TATTTGTATATGTGCAGATA+TGG - chr1.4:67313354-67313373 MS.gene005250:CDS 25.0%
! TCACAATGCAATAAATCAAA+CGG + chr1.4:67312375-67312394 None:intergenic 25.0%
! TGCTTAAAGCTAACAAAATA+TGG - chr1.4:67309946-67309965 MS.gene005250:intron 25.0%
!! ATCATTGAAAAGTTTTCAGA+AGG - chr1.4:67309327-67309346 MS.gene005250:intron 25.0%
!! ATGAAAATACTTTAGAGGTA+TGG - chr1.4:67312474-67312493 MS.gene005250:intron 25.0%
!! GCAATAAACAAGGTAATTTT+TGG + chr1.4:67313619-67313638 None:intergenic 25.0%
!! GTCTCTTTAATTAGTCATTT+TGG + chr1.4:67311487-67311506 None:intergenic 25.0%
!! TATTCTTTTGCTCTTGTATT+TGG - chr1.4:67313155-67313174 MS.gene005250:intron 25.0%
!! TGTTTATTGCATTAGCTTAT+CGG - chr1.4:67313629-67313648 MS.gene005250:intron 25.0%
!! TTCAAGCTTGTTTAATTAGA+TGG - chr1.4:67312115-67312134 MS.gene005250:intron 25.0%
!! TTCTTTTCAACAGTATTATC+AGG + chr1.4:67310003-67310022 None:intergenic 25.0%
!! TTTTACTGCAAACTATAATG+CGG - chr1.4:67313838-67313857 MS.gene005250:intron 25.0%
!! TTTTATTGCTTCGAGAATTT+GGG + chr1.4:67308921-67308940 None:intergenic 25.0%
!!! CCTAAGATTAATTGATTTGT+TGG - chr1.4:67310401-67310420 MS.gene005250:intron 25.0%
!!! CTATTCATAGTGTTACTTTT+TGG - chr1.4:67309831-67309850 MS.gene005250:intron 25.0%
!!! GTATTTTAAATTCAACCAGT+AGG - chr1.4:67313566-67313585 MS.gene005250:intron 25.0%
!!! TAAACAAATGCTTTGTTTTG+TGG - chr1.4:67314067-67314086 MS.gene005250:intron 25.0%
!!! TCTTCTTTTTTTATGATTGC+CGG + chr1.4:67311040-67311059 None:intergenic 25.0%
!!! TGTTTGTGTTTCTATTTTTC+TGG - chr1.4:67314018-67314037 MS.gene005250:CDS 25.0%
AAAATAACAAACCTGTAAGC+TGG + chr1.4:67310290-67310309 None:intergenic 30.0%
AAAATTGACAATTGAGTTCC+TGG - chr1.4:67311059-67311078 MS.gene005250:intron 30.0%
AAAGCATAGTAGAACATCAT+GGG - chr1.4:67310819-67310838 MS.gene005250:intron 30.0%
AAATTGTAAGAAACACAGTG+GGG + chr1.4:67311265-67311284 None:intergenic 30.0%
AATAACGAAAAACGCATTTG+AGG - chr1.4:67311429-67311448 MS.gene005250:intron 30.0%
AATAGAAACACAAACACACA+TGG + chr1.4:67314014-67314033 None:intergenic 30.0%
AATCCAGTAGTAAAGTCAAT+GGG - chr1.4:67309131-67309150 MS.gene005250:CDS 30.0%
AATTCCAAGGATAGAAAACT+AGG - chr1.4:67314222-67314241 MS.gene005250:intron 30.0%
ACAAAATCACTTCCAAGTAA+TGG - chr1.4:67309034-67309053 MS.gene005250:CDS 30.0%
ACAAATTGTAAGAAACACAG+TGG + chr1.4:67311267-67311286 None:intergenic 30.0%
ACGTGGTTAACAAAATCAAA+AGG + chr1.4:67309689-67309708 None:intergenic 30.0%
ACTAATTAAAGAGACACTTG+AGG - chr1.4:67311492-67311511 MS.gene005250:intron 30.0%
ACTTGACTTAATTAACCACA+AGG - chr1.4:67309558-67309577 MS.gene005250:intron 30.0%
AGATTCCTAATTGTATGTGT+TGG - chr1.4:67311846-67311865 MS.gene005250:CDS 30.0%
ATAGAAAGTTTCTTCAGTCA+TGG + chr1.4:67314815-67314834 None:intergenic 30.0%
ATCATTATATGAGGAATCCA+TGG + chr1.4:67314190-67314209 None:intergenic 30.0%
CAAAATCACTTCCAAGTAAT+GGG - chr1.4:67309035-67309054 MS.gene005250:CDS 30.0%
CAAATTGTAAGAAACACAGT+GGG + chr1.4:67311266-67311285 None:intergenic 30.0%
CATATAGAACTGGTTGAAAA+TGG + chr1.4:67313184-67313203 None:intergenic 30.0%
CTCAGTTCAGTACAAATAAT+TGG - chr1.4:67311145-67311164 MS.gene005250:CDS 30.0%
CTGTGTATGATCATCATATA+TGG + chr1.4:67314388-67314407 None:intergenic 30.0%
GAAATTCGATATACCTGTAA+TGG - chr1.4:67310587-67310606 MS.gene005250:intron 30.0%
GATATAAATGTAATGCACTC+AGG - chr1.4:67311009-67311028 MS.gene005250:intron 30.0%
GCAAAATTAACTATTGAGCT+TGG + chr1.4:67312310-67312329 None:intergenic 30.0%
GTAATCAAAGGATTATCTTG+TGG - chr1.4:67313661-67313680 MS.gene005250:CDS 30.0%
GTGGGTACATATATAATTGT+CGG + chr1.4:67312004-67312023 None:intergenic 30.0%
GTTAGAAGAATAATCCACTA+CGG - chr1.4:67312765-67312784 MS.gene005250:intron 30.0%
TAAAGCATAGTAGAACATCA+TGG - chr1.4:67310818-67310837 MS.gene005250:intron 30.0%
TAAGATGTATGCACACTAAT+TGG + chr1.4:67310343-67310362 None:intergenic 30.0%
TACAGGTATATCGAATTTCA+AGG + chr1.4:67310586-67310605 None:intergenic 30.0%
TAGGTTCATCATGAAAATGA+CGG + chr1.4:67313748-67313767 None:intergenic 30.0%
TATAGAACTGGTTGAAAATG+GGG + chr1.4:67313182-67313201 None:intergenic 30.0%
TATGCTGGATTCAGAAATTT+AGG - chr1.4:67312659-67312678 MS.gene005250:intron 30.0%
TCAAAGACTGAATCTAAAAG+AGG - chr1.4:67313806-67313825 MS.gene005250:intron 30.0%
TGATATCCATTTCAATTCCA+AGG - chr1.4:67314209-67314228 MS.gene005250:intron 30.0%
TTACAAACAAAAGAGACACT+TGG + chr1.4:67311392-67311411 None:intergenic 30.0%
TTATAGTTGTCTATGCATGT+TGG - chr1.4:67311784-67311803 MS.gene005250:intron 30.0%
TTCTATCCTTGGAATTGAAA+TGG + chr1.4:67314218-67314237 None:intergenic 30.0%
TTTACTGCAAACTATAATGC+GGG - chr1.4:67313839-67313858 MS.gene005250:intron 30.0%
! ACGTCTAAAATATTCTGTTC+AGG + chr1.4:67312508-67312527 None:intergenic 30.0%
! AGGTACATTGTGTTTCTAAA+TGG - chr1.4:67310249-67310268 MS.gene005250:intron 30.0%
! CTTTTATTGCTTCGAGAATT+TGG + chr1.4:67308922-67308941 None:intergenic 30.0%
! CTTTTTGTTCTTCTCATGTT+TGG - chr1.4:67310140-67310159 MS.gene005250:intron 30.0%
! GAAAAATGAAACCTGATTTG+AGG - chr1.4:67315016-67315035 MS.gene005250:CDS 30.0%
! GACGTTAGTTAGAAGTATAA+GGG - chr1.4:67314263-67314282 MS.gene005250:intron 30.0%
! GGTACATTGTGTTTCTAAAT+GGG - chr1.4:67310250-67310269 MS.gene005250:intron 30.0%
! GTACATTGTGTTTCTAAATG+GGG - chr1.4:67310251-67310270 MS.gene005250:intron 30.0%
! TCTTTTAGATTCAGTCTTTG+AGG + chr1.4:67313807-67313826 None:intergenic 30.0%
! TGGAAGTGATTTTGTAACAT+GGG + chr1.4:67309029-67309048 None:intergenic 30.0%
! TTGGAAGTGATTTTGTAACA+TGG + chr1.4:67309030-67309049 None:intergenic 30.0%
!! AGCATTTTGAGTCTTTTTTC+TGG + chr1.4:67311959-67311978 None:intergenic 30.0%
!! TAATGGACAAACAACCATTT+TGG + chr1.4:67311579-67311598 None:intergenic 30.0%
!! TATTGGTAGTGTGTTGAATT+TGG - chr1.4:67313691-67313710 MS.gene005250:CDS 30.0%
!! TTGAGGATATGTTTGCTATT+TGG - chr1.4:67311509-67311528 MS.gene005250:intron 30.0%
!! TTTGCTATTTGGATACATTC+AGG - chr1.4:67311520-67311539 MS.gene005250:intron 30.0%
!!! AGTCTTTTTTCTGGTTTTGT+AGG + chr1.4:67311950-67311969 None:intergenic 30.0%
!!! ATTTTGTTGCAGAAGCATTT+TGG - chr1.4:67309298-67309317 MS.gene005250:intron 30.0%
!!! GTCATGAATGCTATTTTTTC+AGG - chr1.4:67314152-67314171 MS.gene005250:intron 30.0%
AACTATGCTGTAAAAGTCCA+AGG + chr1.4:67313964-67313983 None:intergenic 35.0%
AAGACTGAATCTAAAAGAGG+AGG - chr1.4:67313809-67313828 MS.gene005250:intron 35.0%
AATTCTCACTGTATCCTTTC+TGG + chr1.4:67312026-67312045 None:intergenic 35.0%
AATTGTAAGAAACACAGTGG+GGG + chr1.4:67311264-67311283 None:intergenic 35.0%
ACTATCCTAAGGTATGGTTA+GGG - chr1.4:67310066-67310085 MS.gene005250:CDS 35.0%
ACTATGCTGTAAAAGTCCAA+GGG + chr1.4:67313963-67313982 None:intergenic 35.0%
AGACGAAGATACATTCATCA+TGG + chr1.4:67313303-67313322 None:intergenic 35.0%
AGATTCCTGCATTGTTAACT+GGG - chr1.4:67309875-67309894 MS.gene005250:intron 35.0%
AGTCCTTCTTAGATGTAACT+TGG + chr1.4:67312441-67312460 None:intergenic 35.0%
ATATCTTCACTTCTACGACT+TGG + chr1.4:67313236-67313255 None:intergenic 35.0%
ATCGAAATCATTAGCTACAC+CGG + chr1.4:67309248-67309267 None:intergenic 35.0%
ATGGGATTTGATCATGATTC+CGG - chr1.4:67309226-67309245 MS.gene005250:intron 35.0%
ATTGTACAGTGGAAAACTTG+AGG + chr1.4:67314729-67314748 None:intergenic 35.0%
ATTTCGATGTTGCATCTGAT+TGG - chr1.4:67309260-67309279 MS.gene005250:intron 35.0%
ATTTGTCTGCAATTGTACAG+TGG + chr1.4:67314740-67314759 None:intergenic 35.0%
CAAGTAACATATCTGCTTCA+GGG + chr1.4:67314843-67314862 None:intergenic 35.0%
CAATCCAGTAGTAAAGTCAA+TGG - chr1.4:67309130-67309149 MS.gene005250:CDS 35.0%
CACATATTCAAAGGCCAAAA+TGG - chr1.4:67311562-67311581 MS.gene005250:intron 35.0%
CAGTGTTTCTTCTTATGATG+TGG - chr1.4:67310957-67310976 MS.gene005250:intron 35.0%
CTCGAAGCAATAAAAGTAGT+GGG - chr1.4:67308926-67308945 MS.gene005250:CDS 35.0%
CTTCCTAATACTTCATCAGA+TGG + chr1.4:67312204-67312223 None:intergenic 35.0%
GCAAGCTGATAATTATACAC+AGG + chr1.4:67314299-67314318 None:intergenic 35.0%
GCAATAAATCAAACGGTGTT+AGG + chr1.4:67312368-67312387 None:intergenic 35.0%
GGAAGCTAAAGGATATATCA+GGG - chr1.4:67314464-67314483 MS.gene005250:intron 35.0%
GGAGCAAGTAATTTCAGAAA+TGG - chr1.4:67308874-67308893 MS.gene005250:CDS 35.0%
GGATTCCAACAACAAATCTT+CGG - chr1.4:67308853-67308872 MS.gene005250:CDS 35.0%
GGTTAAAGAAGTTCAATGAG+TGG - chr1.4:67309495-67309514 MS.gene005250:CDS 35.0%
GTCCTTCTTAGATGTAACTT+GGG + chr1.4:67312440-67312459 None:intergenic 35.0%
GTTGAAAAGAAAGCAATGAG+AGG - chr1.4:67310012-67310031 MS.gene005250:intron 35.0%
GTTTCTTCTTATGATGTGGA+CGG - chr1.4:67310961-67310980 MS.gene005250:intron 35.0%
TAGCTTCCAAAATTCGAGTA+AGG + chr1.4:67314452-67314471 None:intergenic 35.0%
TATACCTAAATACTGACCCT+TGG - chr1.4:67313944-67313963 MS.gene005250:CDS 35.0%
TATATATGTACCCACCAGAA+AGG - chr1.4:67312009-67312028 MS.gene005250:CDS 35.0%
TATGTCAAGTTTGGTCTCAA+TGG - chr1.4:67313456-67313475 MS.gene005250:intron 35.0%
TCAAGTAACATATCTGCTTC+AGG + chr1.4:67314844-67314863 None:intergenic 35.0%
TCAGATAACTCACATTGCTT+GGG + chr1.4:67311914-67311933 None:intergenic 35.0%
TCATGAAAATGACGGTGTAA+AGG + chr1.4:67313740-67313759 None:intergenic 35.0%
TCATGTTGTCTGATTGTTTC+AGG - chr1.4:67313273-67313292 MS.gene005250:CDS 35.0%
TCGATAGAAATCCAACAAAG+CGG - chr1.4:67314959-67314978 MS.gene005250:CDS 35.0%
TCGTGCATTAGGCTTATTAA+AGG + chr1.4:67309922-67309941 None:intergenic 35.0%
TCTCGAAGCAATAAAAGTAG+TGG - chr1.4:67308925-67308944 MS.gene005250:CDS 35.0%
TCTTAACCACTGATATACTG+TGG - chr1.4:67314418-67314437 MS.gene005250:intron 35.0%
TGGAAGCTAAAGGATATATC+AGG - chr1.4:67314463-67314482 MS.gene005250:intron 35.0%
TGTCTCTTGTATGTCAAGTT+TGG - chr1.4:67313447-67313466 MS.gene005250:intron 35.0%
TGTTGATGTCTTTCAAAGTG+CGG - chr1.4:67311089-67311108 MS.gene005250:intron 35.0%
TTCTATATGCAAACCTAGCA+AGG - chr1.4:67313195-67313214 MS.gene005250:intron 35.0%
TTGAGGGAAAATTTCACTAC+TGG - chr1.4:67310549-67310568 MS.gene005250:intron 35.0%
TTGCAAACAAAGCAATACCA+CGG + chr1.4:67310223-67310242 None:intergenic 35.0%
TTGTACACAAAATTCACCAC+AGG + chr1.4:67311885-67311904 None:intergenic 35.0%
TTTCGATGTTGCATCTGATT+GGG - chr1.4:67309261-67309280 MS.gene005250:intron 35.0%
TTTGTGGAATGAAACTGTCA+TGG - chr1.4:67314083-67314102 MS.gene005250:intron 35.0%
! AGACATCAACATCATTTTCC+AGG + chr1.4:67311080-67311099 None:intergenic 35.0%
! ATACTTTAGAGGTATGGATC+TGG - chr1.4:67312480-67312499 MS.gene005250:intron 35.0%
! CGACGTTAGTTAGAAGTATA+AGG - chr1.4:67314262-67314281 MS.gene005250:intron 35.0%
! CGGCTTTCTTTTGTAATCAA+AGG - chr1.4:67313649-67313668 MS.gene005250:CDS 35.0%
! GCTTGTGTTTTATCATCTTC+AGG - chr1.4:67312695-67312714 MS.gene005250:intron 35.0%
! GGAAGTGAGAGTATAAAACA+TGG + chr1.4:67312877-67312896 None:intergenic 35.0%
! TCCAGGAATTTTATGTAGTG+AGG + chr1.4:67311810-67311829 None:intergenic 35.0%
! TGATTTTGTAACATGGGTAG+TGG + chr1.4:67309023-67309042 None:intergenic 35.0%
! TTTAGAGCTTTCCCATTACT+TGG + chr1.4:67309049-67309068 None:intergenic 35.0%
! TTTAGATTCAGTCTTTGAGG+TGG + chr1.4:67313804-67313823 None:intergenic 35.0%
!! AAACCTAGTTCTGTTAGTTC+CGG + chr1.4:67314778-67314797 None:intergenic 35.0%
!! ACTCGAATTTTGGAAGCTAA+AGG - chr1.4:67314453-67314472 MS.gene005250:intron 35.0%
!! TGCTTTGTTTGCAATTGATG+AGG - chr1.4:67310229-67310248 MS.gene005250:intron 35.0%
!! TTAAGCATTGATCGTGCATT+AGG + chr1.4:67309933-67309952 None:intergenic 35.0%
!! TTGCAGTTTTGATACATCCA+GGG + chr1.4:67311362-67311381 None:intergenic 35.0%
!! TTTCCCATTGACTTTACTAC+TGG + chr1.4:67309137-67309156 None:intergenic 35.0%
!! TTTGCAGTTTTGATACATCC+AGG + chr1.4:67311363-67311382 None:intergenic 35.0%
!! TTTTGGCCTTTGAATATGTG+AGG + chr1.4:67311562-67311581 None:intergenic 35.0%
!!! ACTACTCGCTCTTTGTTTTT+TGG - chr1.4:67312552-67312571 MS.gene005250:intron 35.0%
!!! CATAGTGTTACTTTTTGGCA+GGG - chr1.4:67309836-67309855 MS.gene005250:intron 35.0%
!!! CTACTCGCTCTTTGTTTTTT+GGG - chr1.4:67312553-67312572 MS.gene005250:intron 35.0%
!!! TACTCGCTCTTTGTTTTTTG+GGG - chr1.4:67312554-67312573 MS.gene005250:intron 35.0%
!!! TCATAGTGTTACTTTTTGGC+AGG - chr1.4:67309835-67309854 MS.gene005250:intron 35.0%
AACACAAACACACATGGAGT+AGG + chr1.4:67314008-67314027 None:intergenic 40.0%
AACCAAGATGACTGTGATGA+TGG - chr1.4:67310985-67311004 MS.gene005250:intron 40.0%
AAGTCCAAGGGTCAGTATTT+AGG + chr1.4:67313951-67313970 None:intergenic 40.0%
ACAGCACCTCACATATTCAA+AGG - chr1.4:67311553-67311572 MS.gene005250:intron 40.0%
ACCAAGATGACTGTGATGAT+GGG - chr1.4:67310986-67311005 MS.gene005250:intron 40.0%
ACGAGCCAACACATACAATT+AGG + chr1.4:67311854-67311873 None:intergenic 40.0%
ACTTGTAGAATACTTCGGAG+AGG - chr1.4:67313407-67313426 MS.gene005250:intron 40.0%
ACTTTCCCAGTTAACAATGC+AGG + chr1.4:67309883-67309902 None:intergenic 40.0%
AGAACAAAACCCATTTGGGT+TGG + chr1.4:67311721-67311740 None:intergenic 40.0%
AGATGCGATGTGTGCAATAA+TGG - chr1.4:67313777-67313796 MS.gene005250:intron 40.0%
AGGAATCTTAGATGCAGTGA+CGG + chr1.4:67311834-67311853 None:intergenic 40.0%
AGGATAGAAAACTAGGAGAG+AGG - chr1.4:67314229-67314248 MS.gene005250:intron 40.0%
AGTTGAATTACCAATGCGCA+CGG + chr1.4:67314697-67314716 None:intergenic 40.0%
ATGTTACACTACCTCCTTGT+AGG + chr1.4:67314641-67314660 None:intergenic 40.0%
ATTGTAAGAAACACAGTGGG+GGG + chr1.4:67311263-67311282 None:intergenic 40.0%
ATTGTTAACTGGGAAAGTGG+TGG - chr1.4:67309885-67309904 MS.gene005250:intron 40.0%
CAAAATGCTTAAGGAGCCTT+TGG - chr1.4:67311970-67311989 MS.gene005250:CDS 40.0%
CAGATTCCTGCATTGTTAAC+TGG - chr1.4:67309874-67309893 MS.gene005250:intron 40.0%
CCATGAAGCGTAAATTAGGT+CGG + chr1.4:67310707-67310726 None:intergenic 40.0%
CTAACTAACGTCGTAAGACT+TGG + chr1.4:67314255-67314274 None:intergenic 40.0%
CTAGTAGTAACATCTAAGCC+GGG - chr1.4:67311204-67311223 MS.gene005250:intron 40.0%
CTCACCATGAAGCGTAAATT+AGG + chr1.4:67310711-67310730 None:intergenic 40.0%
CTCAGATAACTCACATTGCT+TGG + chr1.4:67311915-67311934 None:intergenic 40.0%
CTCCTCTTTCTTTGCTTTCT+GGG + chr1.4:67314991-67315010 None:intergenic 40.0%
CTTCCACATCATCATCATCA+AGG + chr1.4:67309177-67309196 None:intergenic 40.0%
GAAGAATAATCCACTACGGT+TGG - chr1.4:67312769-67312788 MS.gene005250:intron 40.0%
GACACAAATGCAAGTGTAGT+TGG + chr1.4:67313910-67313929 None:intergenic 40.0%
GACTATCCTAAGGTATGGTT+AGG - chr1.4:67310065-67310084 MS.gene005250:CDS 40.0%
GAGAATGAAGAGAGCAAGAA+AGG + chr1.4:67313073-67313092 None:intergenic 40.0%
GCCTCACTACATAAAATTCC+TGG - chr1.4:67311806-67311825 MS.gene005250:intron 40.0%
GCTAAAGGATATATCAGGGA+AGG - chr1.4:67314468-67314487 MS.gene005250:intron 40.0%
GCTAGGTTTGCATATAGAAC+TGG + chr1.4:67313194-67313213 None:intergenic 40.0%
GCTAGTAGTAACATCTAAGC+CGG - chr1.4:67311203-67311222 MS.gene005250:intron 40.0%
GGAACTAACAGAACTAGGTT+TGG - chr1.4:67314777-67314796 MS.gene005250:CDS 40.0%
GTTCTCCTCATTCTCAGAAT+GGG - chr1.4:67314882-67314901 MS.gene005250:CDS 40.0%
GTTGTCGAATTTGGTTGTTC+TGG - chr1.4:67309736-67309755 MS.gene005250:CDS 40.0%
TAACCACTGATATACTGTGG+TGG - chr1.4:67314421-67314440 MS.gene005250:intron 40.0%
TAGTAGTAACATCTAAGCCG+GGG - chr1.4:67311205-67311224 MS.gene005250:intron 40.0%
TCATAGAGATTGTCTTGTCC+TGG - chr1.4:67309372-67309391 MS.gene005250:intron 40.0%
TCATGATCAAATCCCATTCG+CGG + chr1.4:67309223-67309242 None:intergenic 40.0%
TCATTCTCAGAATGGGGAAA+AGG - chr1.4:67314889-67314908 MS.gene005250:CDS 40.0%
TCCTCTTTCTTTGCTTTCTG+GGG + chr1.4:67314990-67315009 None:intergenic 40.0%
TCTCCTCTTTCTTTGCTTTC+TGG + chr1.4:67314992-67315011 None:intergenic 40.0%
TGCAAACAAAGCAATACCAC+GGG + chr1.4:67310222-67310241 None:intergenic 40.0%
TGCATTCTGTACTGCATAAG+TGG - chr1.4:67314115-67314134 MS.gene005250:intron 40.0%
TGCATTGTTAACTGGGAAAG+TGG - chr1.4:67309882-67309901 MS.gene005250:intron 40.0%
TGCCCAAGTTACATCTAAGA+AGG - chr1.4:67312435-67312454 MS.gene005250:intron 40.0%
TGGTTCAACGAAATCTGCAA+TGG + chr1.4:67312290-67312309 None:intergenic 40.0%
TTCGATGTTGCATCTGATTG+GGG - chr1.4:67309262-67309281 MS.gene005250:intron 40.0%
TTCTCCTCATTCTCAGAATG+GGG - chr1.4:67314883-67314902 MS.gene005250:CDS 40.0%
TTTGTCCAGAGACTATCCTA+AGG - chr1.4:67310055-67310074 MS.gene005250:intron 40.0%
! AACCTGATTTGAGGACTTCT+CGG - chr1.4:67315025-67315044 MS.gene005250:CDS 40.0%
! AGTTAGAAGTATAAGGGAGC+AGG - chr1.4:67314269-67314288 MS.gene005250:intron 40.0%
! ATGATTTTCGTCCAGCTTAC+AGG - chr1.4:67310276-67310295 MS.gene005250:intron 40.0%
! CATTCTGAGAATGAGGAGAA+CGG + chr1.4:67314883-67314902 None:intergenic 40.0%
! GCAACAATTGCGTTTGGAAT+GGG - chr1.4:67312726-67312745 MS.gene005250:intron 40.0%
! GCACCATCTGATGAAGTATT+AGG - chr1.4:67312198-67312217 MS.gene005250:intron 40.0%
! GCAGTGAATTGGAAGTGTAA+TGG + chr1.4:67310786-67310805 None:intergenic 40.0%
! GTGAATTGGAAGTGTAATGG+AGG + chr1.4:67310783-67310802 None:intergenic 40.0%
! TGGAAGTGTAATGGAGGTTA+TGG + chr1.4:67310777-67310796 None:intergenic 40.0%
! TTTGTAACATGGGTAGTGGT+TGG + chr1.4:67309019-67309038 None:intergenic 40.0%
! TTTTAAATGGTTCGCACACG+TGG - chr1.4:67309474-67309493 MS.gene005250:CDS 40.0%
!! AACCTAGTTCTGTTAGTTCC+GGG + chr1.4:67314777-67314796 None:intergenic 40.0%
!! CTCTCCTAGTTTTCTATCCT+TGG + chr1.4:67314229-67314248 None:intergenic 40.0%
!! TCTCGACTTTGGAACTTGAA+TGG + chr1.4:67309092-67309111 None:intergenic 40.0%
!! TGTCCTTGATGATGATGATG+TGG - chr1.4:67309171-67309190 MS.gene005250:intron 40.0%
!! TTGCTCCGAAGATTTGTTGT+TGG + chr1.4:67308861-67308880 None:intergenic 40.0%
!! TTTTCCCCATTCTGAGAATG+AGG + chr1.4:67314890-67314909 None:intergenic 40.0%
!!! ACTCGCTCTTTGTTTTTTGG+GGG - chr1.4:67312555-67312574 MS.gene005250:intron 40.0%
!!! TCTTTGTTTTTTGGGGGTGA+GGG - chr1.4:67312561-67312580 MS.gene005250:intron 40.0%
!!! TTTTTTCTAGACGCTGACGA+CGG + chr1.4:67314933-67314952 None:intergenic 40.0%
AAAGAGTCCTTACCGCGAAT+GGG - chr1.4:67309208-67309227 MS.gene005250:intron 45.0%
AAAGTGATGGCTTCCTTGCT+AGG + chr1.4:67313211-67313230 None:intergenic 45.0%
AACACACATGGAGTAGGATG+AGG + chr1.4:67314002-67314021 None:intergenic 45.0%
AAGATATGCTCCACAACGCT+TGG + chr1.4:67308962-67308981 None:intergenic 45.0%
AAGCACCAGAGCTAATGGAA+AGG + chr1.4:67310927-67310946 None:intergenic 45.0%
AAGGTATGGTTAGGGCCATA+GGG - chr1.4:67310074-67310093 MS.gene005250:CDS 45.0%
ACCAGACTTGCAGAGATACT+TGG + chr1.4:67312050-67312069 None:intergenic 45.0%
ACCTACGTTTGGATGAGTGT+AGG - chr1.4:67311231-67311250 MS.gene005250:intron 45.0%
ACTAAGCTTCAAGACCCCTA+TGG + chr1.4:67310092-67310111 None:intergenic 45.0%
ATCAAATCCCATTCGCGGTA+AGG + chr1.4:67309218-67309237 None:intergenic 45.0%
ATGACAGCACCTCACACATT+TGG + chr1.4:67311333-67311352 None:intergenic 45.0%
ATTGTCGGTCCTTGTTCCAA+AGG + chr1.4:67311989-67312008 None:intergenic 45.0%
CAATTCACTGCGCTTCAAAC+AGG - chr1.4:67310795-67310814 MS.gene005250:intron 45.0%
CAGTCGGCTGAAACAAGAAA+AGG + chr1.4:67310523-67310542 None:intergenic 45.0%
CATCGCATCTGCATGAAAGT+AGG + chr1.4:67313767-67313786 None:intergenic 45.0%
CCAGAGACTATCCTAAGGTA+TGG - chr1.4:67310060-67310079 MS.gene005250:intron 45.0%
CCATACCTTAGGATAGTCTC+TGG + chr1.4:67310063-67310082 None:intergenic 45.0%
CCGACCTAATTTACGCTTCA+TGG - chr1.4:67310704-67310723 MS.gene005250:CDS 45.0%
CGAACAGTTGAAACACCTTG+TGG + chr1.4:67309576-67309595 None:intergenic 45.0%
CGCAACAATTGCGTTTGGAA+TGG - chr1.4:67312725-67312744 MS.gene005250:intron 45.0%
CGTTCTCCTCATTCTCAGAA+TGG - chr1.4:67314881-67314900 MS.gene005250:CDS 45.0%
CTCAGAATGGGGAAAAGGTT+GGG - chr1.4:67314894-67314913 MS.gene005250:CDS 45.0%
CTTTCAAAGTGCGGATGACT+TGG - chr1.4:67311098-67311117 MS.gene005250:intron 45.0%
GATAACTCACATTGCTTGGG+AGG + chr1.4:67311911-67311930 None:intergenic 45.0%
GCAGTACAGAATGCAATCTC+TGG + chr1.4:67314110-67314129 None:intergenic 45.0%
GCTAACACAGTTCACAAACG+TGG + chr1.4:67309706-67309725 None:intergenic 45.0%
GGAATCAGTGCTTGCTTTCT+TGG - chr1.4:67309967-67309986 MS.gene005250:intron 45.0%
GGTAATTTGATACGGCCTAC+TGG + chr1.4:67313584-67313603 None:intergenic 45.0%
GTAATGCACTCAGGAAACAC+CGG - chr1.4:67311018-67311037 MS.gene005250:intron 45.0%
GTAGCTGTCAATGCCATTAC+AGG + chr1.4:67310603-67310622 None:intergenic 45.0%
GTTGTCGCAACAATTGCGTT+TGG - chr1.4:67312720-67312739 MS.gene005250:intron 45.0%
GTTTCAGCAAGCTTCTGCAA+CGG + chr1.4:67310200-67310219 None:intergenic 45.0%
TAAGGTATGGTTAGGGCCAT+AGG - chr1.4:67310073-67310092 MS.gene005250:CDS 45.0%
TACCCGGAACTAACAGAACT+AGG - chr1.4:67314772-67314791 MS.gene005250:CDS 45.0%
TATCAGGGAAGGAGATGACA+AGG - chr1.4:67314479-67314498 MS.gene005250:intron 45.0%
TATGGCCCTAACCATACCTT+AGG + chr1.4:67310074-67310093 None:intergenic 45.0%
TCATACCCCTGCGTTATAAG+CGG + chr1.4:67312083-67312102 None:intergenic 45.0%
TCGATGTTGCATCTGATTGG+GGG - chr1.4:67309263-67309282 MS.gene005250:intron 45.0%
TCTCACTGTATCCTTTCTGG+TGG + chr1.4:67312023-67312042 None:intergenic 45.0%
TCTCAGAATGGGGAAAAGGT+TGG - chr1.4:67314893-67314912 MS.gene005250:CDS 45.0%
TCTCCACCACAGTATATCAG+TGG + chr1.4:67314427-67314446 None:intergenic 45.0%
TGACAGCACCTCACACATTT+GGG + chr1.4:67311332-67311351 None:intergenic 45.0%
TGGTTGATCGTTCTCGACTT+TGG + chr1.4:67309103-67309122 None:intergenic 45.0%
TTAGATGTAACTTGGGCAGC+TGG + chr1.4:67312433-67312452 None:intergenic 45.0%
TTCACCTCAGATGATGCAGA+TGG - chr1.4:67310901-67310920 MS.gene005250:intron 45.0%
TTTCCCTCAATGCAGACAGT+CGG + chr1.4:67310539-67310558 None:intergenic 45.0%
! ACCTGATTTGAGGACTTCTC+GGG - chr1.4:67315026-67315045 MS.gene005250:CDS 45.0%
! ACTGATATACTGTGGTGGAG+AGG - chr1.4:67314426-67314445 MS.gene005250:intron 45.0%
! CCAAGATGACTGTGATGATG+GGG - chr1.4:67310987-67311006 MS.gene005250:intron 45.0%
! CTACGACTTGGCAAAAGTGA+TGG + chr1.4:67313224-67313243 None:intergenic 45.0%
! CTCACTGTATCCTTTCTGGT+GGG + chr1.4:67312022-67312041 None:intergenic 45.0%
! CTGTTTGAAGCGCAGTGAAT+TGG + chr1.4:67310797-67310816 None:intergenic 45.0%
! CTTGCACTGAGTTGTTGTTC+TGG - chr1.4:67314314-67314333 MS.gene005250:intron 45.0%
! GAGAGGCCTTACTCGAATTT+TGG - chr1.4:67314443-67314462 MS.gene005250:intron 45.0%
! TGATGATGTGGAAGAGCATG+AGG - chr1.4:67309183-67309202 MS.gene005250:intron 45.0%
! TTTTGGTCCCCAAATGTGTG+AGG - chr1.4:67311321-67311340 MS.gene005250:intron 45.0%
!! ATCAGAAGCACCAGAGCTAA+TGG + chr1.4:67310932-67310951 None:intergenic 45.0%
!! CTTAAGGAGCCTTTGGAACA+AGG - chr1.4:67311977-67311996 MS.gene005250:CDS 45.0%
!!! CTCTTTGTTTTTTGGGGGTG+AGG - chr1.4:67312560-67312579 MS.gene005250:intron 45.0%
!!! TGGCTCGTTTTAGTTACCTG+TGG - chr1.4:67311866-67311885 MS.gene005250:CDS 45.0%
!!! CATTATTTATTTTATTTTTT+GGG - chr1.4:67311594-67311613 MS.gene005250:intron 5.0%
!!! TAAAAAAAATATTCTAAAAT+AGG - chr1.4:67313523-67313542 MS.gene005250:intron 5.0%
AACATTCGGTATCCAGCCCA+AGG - chr1.4:67311658-67311677 MS.gene005250:intron 50.0%
AACTCACATTGCTTGGGAGG+AGG + chr1.4:67311908-67311927 None:intergenic 50.0%
AAGGCCATCTGCATCATCTG+AGG + chr1.4:67310908-67310927 None:intergenic 50.0%
AGAAGGAAGCTCTCTCTGCT+TGG - chr1.4:67309344-67309363 MS.gene005250:intron 50.0%
AGGTATGGTTAGGGCCATAG+GGG - chr1.4:67310075-67310094 MS.gene005250:CDS 50.0%
AGTGCTTGCTTTCTTGGCTC+TGG - chr1.4:67309973-67309992 MS.gene005250:intron 50.0%
ATTTGCGCAGTGAGCCTACA+AGG - chr1.4:67314624-67314643 MS.gene005250:CDS 50.0%
CCCCATCATCACAGTCATCT+TGG + chr1.4:67310990-67311009 None:intergenic 50.0%
CCTACTACCAAGAAGCTGGA+CGG - chr1.4:67312967-67312986 MS.gene005250:CDS 50.0%
CTACTACCAAGAAGCTGGAC+GGG - chr1.4:67312968-67312987 MS.gene005250:CDS 50.0%
GAAAGAGTCCTTACCGCGAA+TGG - chr1.4:67309207-67309226 MS.gene005250:intron 50.0%
GAAGCCTACTACCAAGAAGC+TGG - chr1.4:67312963-67312982 MS.gene005250:CDS 50.0%
GACAGCACCTCACACATTTG+GGG + chr1.4:67311331-67311350 None:intergenic 50.0%
GATGGCCTTTCCATTAGCTC+TGG - chr1.4:67310919-67310938 MS.gene005250:CDS 50.0%
GCCAAGTATCTCTGCAAGTC+TGG - chr1.4:67312046-67312065 MS.gene005250:intron 50.0%
GCCCCAGAAAGCAAAGAAAG+AGG - chr1.4:67314986-67315005 MS.gene005250:CDS 50.0%
GCCTACACTCATCCAAACGT+AGG + chr1.4:67311235-67311254 None:intergenic 50.0%
GGGGTGAGGGAGTTTAAAGA+GGG - chr1.4:67312574-67312593 MS.gene005250:intron 50.0%
TAGTAACATCTAAGCCGGGG+CGG - chr1.4:67311208-67311227 MS.gene005250:intron 50.0%
TCCACAACGCTTGGAATCGA+AGG + chr1.4:67308953-67308972 None:intergenic 50.0%
TCTCTGCAAGTCTGGTGTGA+AGG - chr1.4:67312054-67312073 MS.gene005250:intron 50.0%
TTACCAATGCGCACGGAACA+AGG + chr1.4:67314690-67314709 None:intergenic 50.0%
! ACCTCAGGTTAGTCAGTCCT+TGG + chr1.4:67311678-67311697 None:intergenic 50.0%
! CAAAGTGCGGATGACTTGGA+TGG - chr1.4:67311102-67311121 MS.gene005250:intron 50.0%
! CCTCAGGTTAGTCAGTCCTT+GGG + chr1.4:67311677-67311696 None:intergenic 50.0%
! CCTGATTTGAGGACTTCTCG+GGG - chr1.4:67315027-67315046 MS.gene005250:CDS 50.0%
! GCACTGAGTTGTTGTTCTGG+TGG - chr1.4:67314317-67314336 MS.gene005250:intron 50.0%
! GGTGCTGTCATTATAGTCCC+TGG - chr1.4:67311342-67311361 MS.gene005250:intron 50.0%
! GTGCTTGCTTTCTTGGCTCT+GGG - chr1.4:67309974-67309993 MS.gene005250:intron 50.0%
! TCCTTCGATTCCAAGCGTTG+TGG - chr1.4:67308949-67308968 MS.gene005250:CDS 50.0%
!! AAAACCCATTTGGGTTGGCC+TGG + chr1.4:67311716-67311735 None:intergenic 50.0%
!! TTAGATGCAGTGACGGATCC+AGG + chr1.4:67311827-67311846 None:intergenic 50.0%
AACCAGATCCAGTTGCAGCC+AGG + chr1.4:67309393-67309412 None:intergenic 55.0%
ACCACCAGGCCAACCCAAAT+GGG - chr1.4:67311709-67311728 MS.gene005250:intron 55.0%
CAGCCGACTGTCTGCATTGA+GGG - chr1.4:67310533-67310552 MS.gene005250:CDS 55.0%
CCCAAGGACTGACTAACCTG+AGG - chr1.4:67311674-67311693 MS.gene005250:intron 55.0%
CCCCGAGAAGTCCTCAAATC+AGG + chr1.4:67315030-67315049 None:intergenic 55.0%
GGGGGTGAGGGAGTTTAAAG+AGG - chr1.4:67312573-67312592 MS.gene005250:intron 55.0%
TCAGCCGACTGTCTGCATTG+AGG - chr1.4:67310532-67310551 MS.gene005250:CDS 55.0%
TCAGGCACGTAGCTGTTCCA+TGG - chr1.4:67314170-67314189 MS.gene005250:intron 55.0%
TGTCTTGTCCTGGCTGCAAC+TGG - chr1.4:67309382-67309401 MS.gene005250:intron 55.0%
! AAGGCTGCCGCTTATAACGC+AGG - chr1.4:67312073-67312092 MS.gene005250:intron 55.0%
! AGGCTGCCGCTTATAACGCA+GGG - chr1.4:67312074-67312093 MS.gene005250:intron 55.0%
! AGGTTAGTCAGTCCTTGGGC+TGG + chr1.4:67311673-67311692 None:intergenic 55.0%
! CCGTCCAGCTTCTTGGTAGT+AGG + chr1.4:67312970-67312989 None:intergenic 55.0%
!! CAGAAGCTTGCTGAAACCCG+TGG - chr1.4:67310203-67310222 MS.gene005250:intron 55.0%
AGACGCTGACGACGGATCTC+AGG + chr1.4:67314925-67314944 None:intergenic 60.0%
ATCCAAACGTAGGTCCGCCC+CGG + chr1.4:67311225-67311244 None:intergenic 60.0%
CACCACCAGGCCAACCCAAA+TGG - chr1.4:67311708-67311727 MS.gene005250:intron 60.0%
GTCCTGGCTGCAACTGGATC+TGG - chr1.4:67309388-67309407 MS.gene005250:intron 60.0%
TACCAAGAAGCTGGACGGGC+TGG - chr1.4:67312972-67312991 MS.gene005250:CDS 60.0%
TGCGCAGTGAGCCTACAAGG+AGG - chr1.4:67314627-67314646 MS.gene005250:CDS 60.0%
! AATCCACTACGGTTGGCCGC+AGG - chr1.4:67312776-67312795 MS.gene005250:intron 60.0%
! GGCTGCCGCTTATAACGCAG+GGG - chr1.4:67312075-67312094 MS.gene005250:intron 60.0%
!! ACCCATTTGGGTTGGCCTGG+TGG + chr1.4:67311713-67311732 None:intergenic 60.0%
!! CAGCCTTGTTCCGTGCGCAT+TGG - chr1.4:67314684-67314703 MS.gene005250:CDS 60.0%
!! TGGCCTGGTGGTGTTGGCTT+GGG + chr1.4:67311701-67311720 None:intergenic 60.0%
!! TGGTGTTGGCTTGGGACCTC+AGG + chr1.4:67311693-67311712 None:intergenic 60.0%
!! TTGGCCTGGTGGTGTTGGCT+TGG + chr1.4:67311702-67311721 None:intergenic 60.0%
!! TTGGGTTGGCCTGGTGGTGT+TGG + chr1.4:67311707-67311726 None:intergenic 60.0%
AGACCTGCGGCCAACCGTAG+TGG + chr1.4:67312782-67312801 None:intergenic 65.0%
GACCAGCCCGTCCAGCTTCT+TGG + chr1.4:67312977-67312996 None:intergenic 65.0%
GGTCCCAAGCCAACACCACC+AGG - chr1.4:67311695-67311714 MS.gene005250:intron 65.0%
!! CTGGACGGGCTGGTCGAGAT+GGG - chr1.4:67312982-67313001 MS.gene005250:CDS 65.0%
!! CTGGGGCTCTGCCGCTTTGT+TGG + chr1.4:67314973-67314992 None:intergenic 65.0%
AGCCGGGGCGGACCTACGTT+TGG - chr1.4:67311220-67311239 MS.gene005250:intron 70.0%
!! GCTGGACGGGCTGGTCGAGA+TGG - chr1.4:67312981-67313000 MS.gene005250:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 67308851 67315080 67308851 ID=MS.gene005250
chr1.4 mRNA 67308851 67315080 67308851 ID=MS.gene005250.t1;Parent=MS.gene005250
chr1.4 exon 67314522 67315080 67314522 ID=MS.gene005250.t1.exon1;Parent=MS.gene005250.t1
chr1.4 CDS 67314522 67315080 67314522 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
chr1.4 exon 67313855 67314074 67313855 ID=MS.gene005250.t1.exon2;Parent=MS.gene005250.t1
chr1.4 CDS 67313855 67314074 67313855 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
chr1.4 exon 67313634 67313744 67313634 ID=MS.gene005250.t1.exon3;Parent=MS.gene005250.t1
chr1.4 CDS 67313634 67313744 67313634 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
chr1.4 exon 67313206 67313395 67313206 ID=MS.gene005250.t1.exon4;Parent=MS.gene005250.t1
chr1.4 CDS 67313206 67313395 67313206 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
chr1.4 exon 67312808 67313114 67312808 ID=MS.gene005250.t1.exon5;Parent=MS.gene005250.t1
chr1.4 CDS 67312808 67313114 67312808 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
chr1.4 exon 67311835 67312052 67311835 ID=MS.gene005250.t1.exon6;Parent=MS.gene005250.t1
chr1.4 CDS 67311835 67312052 67311835 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
chr1.4 exon 67311441 67311497 67311441 ID=MS.gene005250.t1.exon7;Parent=MS.gene005250.t1
chr1.4 CDS 67311441 67311497 67311441 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
chr1.4 exon 67311134 67311214 67311134 ID=MS.gene005250.t1.exon8;Parent=MS.gene005250.t1
chr1.4 CDS 67311134 67311214 67311134 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
chr1.4 exon 67310911 67310974 67310911 ID=MS.gene005250.t1.exon9;Parent=MS.gene005250.t1
chr1.4 CDS 67310911 67310974 67310911 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
chr1.4 exon 67310637 67310736 67310637 ID=MS.gene005250.t1.exon10;Parent=MS.gene005250.t1
chr1.4 CDS 67310637 67310736 67310637 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
chr1.4 exon 67310477 67310560 67310477 ID=MS.gene005250.t1.exon11;Parent=MS.gene005250.t1
chr1.4 CDS 67310477 67310560 67310477 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
chr1.4 exon 67310062 67310152 67310062 ID=MS.gene005250.t1.exon12;Parent=MS.gene005250.t1
chr1.4 CDS 67310062 67310152 67310062 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
chr1.4 exon 67309641 67309757 67309641 ID=MS.gene005250.t1.exon13;Parent=MS.gene005250.t1
chr1.4 CDS 67309641 67309757 67309641 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
chr1.4 exon 67309431 67309523 67309431 ID=MS.gene005250.t1.exon14;Parent=MS.gene005250.t1
chr1.4 CDS 67309431 67309523 67309431 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
chr1.4 exon 67308851 67309177 67308851 ID=MS.gene005250.t1.exon15;Parent=MS.gene005250.t1
chr1.4 CDS 67308851 67309177 67308851 ID=cds.MS.gene005250.t1;Parent=MS.gene005250.t1
Gene Sequence

>MS.gene005250

ATGGATTCCAACAACAAATCTTCGGAGCAAGTAATTTCAGAAATGGTTGAAATGGGTTTCGAGCATTCCCAAATTCTCGAAGCAATAAAAGTAGTGGGTCCTTCGATTCCAAGCGTTGTGGAGCATATCTTCAATACTAGTAATAGTAGCAGCAGTAATCGTGAACCAACCACTACCCATGTTACAAAATCACTTCCAAGTAATGGGAAAGCTCTAAAAAAACGAGCTTTTTCATCTTCCATTCAAGTTCCAAAGTCGAGAACGATCAACCATTATTTTCAATCCAGTAGTAAAGTCAATGGGAAAAACAAAAATGTCGTTGTCCTTGATGATGATGATGTGGAAGAGCATGAGGAGAAAGAGTCCTTACCGCGAATGGGATTTGATCATGATTCCGGTGTAGCTAATGATTTCGATGTTGCATCTGATTGGGGGCAGAAAGCTAGCATTTTGTTGCAGAAGCATTTTGGTTTTTCATCATTGAAAAGTTTTCAGAAGGAAGCTCTCTCTGCTTGGATTGATCATAGAGATTGTCTTGTCCTGGCTGCAACTGGATCTGGTTTTGTTCTTTATCTTTACTAAAATGTTATTTGAACAATTTGAGACAACAAAATTCAACATCTTTTTAAATGGTTCGCACACGTGGTTAAAGAAGTTCAATGAGTGGCTAATGAGTATCTCAAGATTTGATAACTCATTAACCATTAACTTGACTTAATTAACCACAAGGTGTTTCAACTGTTCGTAAATTTGAACACTAGAAATCTAGGTTAATCGCATTTAAATCTATGGTTAATAAATAATAAGTTGGGATGCCAAATATATCTATTACTCACCTTTTGATTTTGTTAACCACGTTTGTGAACTGTGTTAGCTATTTAAAAAGTTGTCGAATTTGGTTGTTCTGGATAAAGTATAAGTATCATTTCTGCTATATATATTTCTTCATACTTGCTGTGTTCTGTGCAGCTGTTGTGCATCTATTCATAGTGTTACTTTTTGGCAGGGAAATCTCTGTGCTTTCAGATTCCTGCATTGTTAACTGGGAAAGTGGTGGTTGTGATTTCGCCTTTAATAAGCCTAATGCACGATCAATGCTTAAAGCTAACAAAATATGGAATCAGTGCTTGCTTTCTTGGCTCTGGGCAGCCTGATAATACTGTTGAAAAGAAAGCAATGAGAGGCATGTATAGTATAGTGTATGTTTGTCCAGAGACTATCCTAAGGTATGGTTAGGGCCATAGGGGTCTTGAAGCTTAGTCTGTGTTTCAGAAGTCTACATTTGCTGTCTTTTTGTTCTTCTCATGTTTGGTATTTATAATACAATTCAATGTAGATTGATTCAACCGTTGCAGAAGCTTGCTGAAACCCGTGGTATTGCTTTGTTTGCAATTGATGAGGTACATTGTGTTTCTAAATGGGGTCATGATTTTCGTCCAGCTTACAGGTTTGTTATTTTTATCCCTTCTATTTATTCATTGTTTATGCACCAATTAGTGTGCATACATCTTAAATTATCATAGCTTGTGATTTGTGTGTACATCAAAGAACCTAAGATTAATTGATTTGTTGGTTGACTTTTTCAACTATCAAACATATCAAGTTTATCCTTTGTTTGTGTATTTATTCTAATGTTGCCATTTGTAAGTATGATATGTTTTTTTAAATGCCTTTTCTTGTTTCAGCCGACTGTCTGCATTGAGGGAAAATTTCACTACTGGCAAGCTAAAATCCTTGAAATTCGATATACCTGTAATGGCATTGACAGCTACAGCTACAGAGAGAGTTCGAGAAGACATTTTAAAATCACTGCGTTTGTCAAAAGATACAAGTCTTGTTCTCACATCATTTTTCCGACCTAATTTACGCTTCATGGTGAGTTTGTTGATGACAATTCATATAATTATTATATTTTTTGTTACTCCATAACCTCCATTACACTTCCAATTCACTGCGCTTCAAACAGGTAAAGCATAGTAGAACATCATGGGCTTCTTATGAGAAAGATTTTCATGAATTGATTAAAGTATATGGTGGGAATAAAAAAGCTTTCACCTCAGATGATGCAGATGGCCTTTCCATTAGCTCTGGTGCTTCTGATACAGACAGTGTTTCTTCTTATGATGTGGACGGCAACCAAGATGACTGTGATGATGGGGATATAAATGTAATGCACTCAGGAAACACCGGCAATCATAAAAAAAGAAGAAAATTGACAATTGAGTTCCTGGAAAATGATGTTGATGTCTTTCAAAGTGCGGATGACTTGGATGGTACTGATCTTTCTGCTATCTCTCAGTTCAGTACAAATAATTGGTCATGTTTAGTTTAGAAACTGAAAGCATTTTCAGTGCTAGTAGTAACATCTAAGCCGGGGCGGACCTACGTTTGGATGAGTGTAGGCTTGTGCCCCCCACTGTGTTTCTTACAATTTGTTGAGTACATATATTAATATTAGGGTAAACAATTATTTTGGTCCCCAAATGTGTGAGGTGCTGTCATTATAGTCCCTGGATGTATCAAAACTGCAAATGCATTCCAAGTGTCTCTTTTGTTTGTAATTTTAGAGACTAAATTGAATAACGAAAAACGCATTTGAGGACCAAAAGATTATCAAAAAACACATTTGAGGACCAAAATGACTAATTAAAGAGACACTTGAGGATATGTTTGCTATTTGGATACATTCAGGAACTATAATGACAGCACCTCACATATTCAAAGGCCAAAATGGTTGTTTGTCCATTATTTATTTTATTTTTTGGGTCTGAAAATGAATAAATGTTGTTTGTTTGTCATTTTTTTTTAACATTCGGTATCCAGCCCAAGGACTGACTAACCTGAGGTCCCAAGCCAACACCACCAGGCCAACCCAAATGGGTTTTGTTCTATTATTATAGAAAATGATAAATCAGTCGATGTTTTATTTAATGTTATAGTTGTCTATGCATGTTGGCCTCACTACATAAAATTCCTGGATCCGTCACTGCATCTAAGATTCCTAATTGTATGTGTTGGCTCGTTTTAGTTACCTGTGGTGAATTTTGTGTACAACCTCCTCCCAAGCAATGTGAGTTATCTGAGACAATTGATACACCTACAAAACCAGAAAAAAGACTCAAAATGCTTAAGGAGCCTTTGGAACAAGGACCGACAATTATATATGTACCCACCAGAAAGGATACAGTGAGAATTGCCAAGTATCTCTGCAAGTCTGGTGTGAAGGCTGCCGCTTATAACGCAGGGGTATGAAGTATAATTATATTCAAGCTTGTTTAATTAGATGGCTGTTTATATTTTGAATGAATCAGGGTGATCATGTCTTGACAAGAGAATTTCAATTCTATGCACCATCTGATGAAGTATTAGGAAGTAGAAGAATTTATAACTTCTTATTTTTCTTTCTGTTCTTTATTTTCAATTATTTTGGCATGCTCCATTGCAGATTTCGTTGAACCAAGCTCAATAGTTAATTTTGCATTATGATATATAAGAAATGTTTGCTGCACATTCTCCTAACACCGTTTGATTTATTGCATTGTGAAGTTTGAAACCAATTTATGAGTTCAATTTCTTTCTCCAGCTGCCCAAGTTACATCTAAGAAGGACTCATAAAGAGTTTCATGAAAATACTTTAGAGGTATGGATCTGGTGCCTGAACAGAATATTTTAGACGTGTCAGTTCAATATTTTTCAACTCAACTACTCGCTCTTTGTTTTTTGGGGGTGAGGGAGTTTAAAGAGGGACTTCTAATTTTATTATTTGAATTAACGTGGTCGTATGTCATCTTTTAATACTTCAAATTTATATGCTGGATTCAGAAATTTAGGTTTCACATGTTGTGCTTGTGTTTTATCATCTTCAGGTTGTTGTCGCAACAATTGCGTTTGGAATGGGAATTGATAAATCAAATGTTAGAAGAATAATCCACTACGGTTGGCCGCAGGTCTTTTTTTTCAAATACATTTTTCCTGACATAATCAATTATAATTGAAGTTTTTATCTGTATTTTCTTGTGCATTCCATGTTTTATACTCTCACTTCCCAAGTTTTAAAAAAATTCTTTTGTAGATACCTAAAATATTTTTACATGTAATTTTATTAGAGTTTGGAAGCCTACTACCAAGAAGCTGGACGGGCTGGTCGAGATGGGAAATTAGCAGATTGCAGTAAGTTTAATTATACTGTAGTATAATTTTTATCTTGGGATGCAGTTTTCCTTTCTTGCTCTCTTCATTCTCTTTTGAATTTTAAATTTATGTTTCACCTTTGATTCACATAATAAGTAGGTTGCTTATTGCTCTATTCTTTTGCTCTTGTATTTGGTCCCCATTTTCAACCAGTTCTATATGCAAACCTAGCAAGGAAGCCATCACTTTTGCCAAGTCGTAGAAGTGAAGATATGACAAAACAAGCATATATCATGTTGTCTGATTGTTTCAGGTTTGCCATGATGAATGTATCTTCGTCTTCTTTTCCGATATTATGTTAGTGTTAAATCTTATTTGTATATGTGCAGATATGGAATGAATACTTCATGTTGTCGAGCAAAGATACTTGTAGAATACTTCGGAGAGGATTTCAGCAATCAGAAATGTCTCTTGTATGTCAAGTTTGGTCTCAATGGCTAGCTGTTTTATTATCTTTAACAGTTTAAGCATTAGTTGAACTTAAAAAAAATATTCTAAAATAGGAGAAACTTGAAATCCTTTTTGTATTTTAAATTCAACCAGTAGGCCGTATCAAATTACCTTGTTTATTGTACCAAAAATTACCTTGTTTATTGCATTAGCTTATCGGCTTTCTTTTGTAATCAAAGGATTATCTTGTGGTTGTATTTATTGGTAGTGTGTTGAATTTGGAGTCATTTATTAATTCATGTTGGCCTTTACACCGTCATTTTCATGATGAACCTACTTTCATGCAGATGCGATGTGTGCAATAATGGACCACCTCAAAGACTGAATCTAAAAGAGGAGGCTTGTATTTTACTGCAAACTATAATGCGGGCCCGAAATGTATGTCTAATATTTTCAGTTTGATATTTGTATTAGACCAACTACACTTGCATTTGTGTCTTATATGTGACTTTTATACCTAAATACTGACCCTTGGACTTTTACAGCATAGTTTTCAAACATACTGTACCTCATCCTACTCCATGTGTGTTTGTGTTTCTATTTTTCTGGATAAAGTTTCAAAATGATAAATTGGTTAAACAAATGCTTTGTTTTGTGGAATGAAACTGTCATGGACCAGAGATTGCATTCTGTACTGCATAAGTGGAAAGAAACTGATATGTCATGAATGCTATTTTTTCAGGCACGTAGCTGTTCCATGGATTCCTCATATAATGATGATATCCATTTCAATTCCAAGGATAGAAAACTAGGAGAGAGGCCAAGTCTTACGACGTTAGTTAGAAGTATAAGGGAGCAGGTAAACCTGTGTATAATTATCAGCTTGCACTGAGTTGTTGTTCTGGTGGATGCTTTATGTTGTTACGAATTCAAGTAACAAATTTTAATTGCTTCCATATATGATGATCATACACAGTTTCAAAAATTCTTAACCACTGATATACTGTGGTGGAGAGGCCTTACTCGAATTTTGGAAGCTAAAGGATATATCAGGGAAGGAGATGACAAGGTATACTTGCTTCAACTAGAAACAACCTATCCTTGTATATTGATATTAAAATTGCATGTTCATTGAATTATTTGTTGAAAGTGTTGAATTTGTTGTCACTGAAACTTAAGAAATTATATAAACATTTGCGCAGTGAGCCTACAAGGAGGTAGTGTAACATAATGATCTTTATCTGCACATATGCAGCCTTGTTCCGTGCGCATTGGTAATTCAACTGCAATTTGACCTCAAGTTTTCCACTGTACAATTGCAGACAAATGTTCAGATAAAATACCCGGAACTAACAGAACTAGGTTTGGAATTTGTCAAGTCCATGACTGAAGAAACTTTCTATGTTTACCCTGAAGCAGATATGTTACTTGAAACAAAAACTGACAAACCGTTCTCCTCATTCTCAGAATGGGGAAAAGGTTGGGCTGATCCTGAGATCCGTCGTCAGCGTCTAGAAAAAATGCAACTCGATAGAAATCCAACAAAGCGGCAGAGCCCCAGAAAGCAAAGAAAGAGGAGAGCTAGAAAAATGAAACCTGATTTGAGGACTTCTCGGGGTAGACTATCAGCAAAACTCTCAAAAAAGTAA
Protein sequence

>MS.gene005250.t1

MDSNNKSSEQVISEMVEMGFEHSQILEAIKVVGPSIPSVVEHIFNTSNSSSSNREPTTTHVTKSLPSNGKALKKRAFSSSIQVPKSRTINHYFQSSSKVNGKNKNVVVLDDDDVEEHEEKESLPRMGFDHDSGVANDFDVASDWGQKASILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLTKYGISACFLGSGQPDNTVEKKAMRGMYSIVYVCPETILRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSALRENFTTGKLKSLKFDIPVMALTATATERVREDILKSLRLSKDTSLVLTSFFRPNLRFMVKHSRTSWASYEKDFHELIKVYGGNKKAFTSDDADGLSISSGASDTDSVSSYDVDGNQDDCDDGDINVMHSGNTGNHKKRRKLTIEFLENDVDVFQSADDLDVTCGEFCVQPPPKQCELSETIDTPTKPEKRLKMLKEPLEQGPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLARKPSLLPSRRSEDMTKQAYIMLSDCFRYGMNTSCCRAKILVEYFGEDFSNQKCLLCDVCNNGPPQRLNLKEEACILLQTIMRARNARSCSMDSSYNDDIHFNSKDRKLGERPSLTTLVRSIREQFQKFLTTDILWWRGLTRILEAKGYIREGDDKTNVQIKYPELTELGLEFVKSMTEETFYVYPEADMLLETKTDKPFSSFSEWGKGWADPEIRRQRLEKMQLDRNPTKRQSPRKQRKRRARKMKPDLRTSRGRLSAKLSKK