Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005613.t1 | XP_024639656.1 | 95.8 | 1168 | 48 | 1 | 1 | 1168 | 1 | 1167 | 0.00E+00 | 2078.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005613.t1 | Q7ZZ25 | 37.8 | 241 | 148 | 2 | 927 | 1167 | 84 | 322 | 3.2e-42 | 175.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005613.t1 | A0A396JXZ4 | 95.8 | 1168 | 48 | 1 | 1 | 1168 | 1 | 1167 | 0.0e+00 | 2078.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene35213 | MS.gene005613 | PPI |
MS.gene031011 | MS.gene005613 | PPI |
MS.gene028240 | MS.gene005613 | PPI |
MS.gene20455 | MS.gene005613 | PPI |
MS.gene08402 | MS.gene005613 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005613.t1 | MTR_1g088730 | 95.548 | 1168 | 49 | 2 | 1 | 1168 | 1 | 1165 | 0.0 | 2278 |
MS.gene005613.t1 | MTR_1g088750 | 68.155 | 1165 | 331 | 16 | 27 | 1168 | 24 | 1171 | 0.0 | 1534 |
MS.gene005613.t1 | MTR_1g088750 | 66.266 | 1165 | 304 | 17 | 27 | 1168 | 24 | 1122 | 0.0 | 1469 |
MS.gene005613.t1 | MTR_3g089100 | 53.781 | 1058 | 449 | 16 | 114 | 1158 | 124 | 1154 | 0.0 | 1021 |
MS.gene005613.t1 | MTR_3g089100 | 53.365 | 1055 | 424 | 16 | 114 | 1158 | 124 | 1120 | 0.0 | 1006 |
MS.gene005613.t1 | MTR_3g089100 | 53.308 | 1058 | 425 | 18 | 114 | 1158 | 124 | 1125 | 0.0 | 1004 |
MS.gene005613.t1 | MTR_5g009840 | 39.114 | 542 | 237 | 7 | 678 | 1166 | 245 | 746 | 8.37e-112 | 369 |
MS.gene005613.t1 | MTR_5g009840 | 45.238 | 84 | 44 | 1 | 423 | 506 | 54 | 135 | 3.33e-14 | 78.2 |
MS.gene005613.t1 | MTR_8g099065 | 37.319 | 552 | 244 | 7 | 678 | 1167 | 254 | 765 | 6.82e-109 | 362 |
MS.gene005613.t1 | MTR_8g099065 | 33.721 | 172 | 101 | 3 | 422 | 582 | 58 | 227 | 5.26e-16 | 84.0 |
MS.gene005613.t1 | MTR_6g033740 | 38.795 | 531 | 241 | 9 | 678 | 1165 | 239 | 728 | 1.21e-108 | 360 |
MS.gene005613.t1 | MTR_6g033740 | 40.426 | 94 | 54 | 1 | 413 | 506 | 45 | 136 | 5.66e-14 | 77.4 |
MS.gene005613.t1 | MTR_1g099480 | 35.783 | 517 | 263 | 6 | 678 | 1165 | 221 | 697 | 2.97e-93 | 317 |
MS.gene005613.t1 | MTR_1g099470 | 43.284 | 402 | 215 | 8 | 769 | 1165 | 269 | 662 | 5.52e-89 | 304 |
MS.gene005613.t1 | MTR_1g099470 | 41.237 | 97 | 56 | 1 | 423 | 518 | 49 | 145 | 6.79e-14 | 77.0 |
MS.gene005613.t1 | MTR_8g099065 | 35.113 | 487 | 214 | 7 | 678 | 1102 | 254 | 700 | 6.45e-81 | 280 |
MS.gene005613.t1 | MTR_8g099065 | 33.721 | 172 | 101 | 3 | 422 | 582 | 58 | 227 | 8.08e-16 | 83.2 |
MS.gene005613.t1 | MTR_4g074920 | 39.062 | 384 | 214 | 4 | 785 | 1168 | 521 | 884 | 2.12e-80 | 284 |
MS.gene005613.t1 | MTR_1g101870 | 46.154 | 286 | 145 | 3 | 877 | 1162 | 507 | 783 | 4.54e-73 | 261 |
MS.gene005613.t1 | MTR_1g101870 | 46.853 | 286 | 142 | 4 | 877 | 1162 | 456 | 731 | 7.67e-73 | 260 |
MS.gene005613.t1 | MTR_1g099480 | 33.040 | 454 | 236 | 5 | 678 | 1102 | 221 | 635 | 1.04e-68 | 244 |
MS.gene005613.t1 | MTR_3g092070 | 45.149 | 268 | 144 | 3 | 901 | 1167 | 47 | 312 | 1.50e-67 | 233 |
MS.gene005613.t1 | MTR_3g092070 | 45.149 | 268 | 144 | 3 | 901 | 1167 | 47 | 312 | 3.81e-67 | 230 |
MS.gene005613.t1 | MTR_3g092080 | 44.747 | 257 | 140 | 2 | 912 | 1168 | 62 | 316 | 1.54e-66 | 229 |
MS.gene005613.t1 | MTR_3g092080 | 44.747 | 257 | 140 | 2 | 912 | 1168 | 62 | 316 | 1.90e-66 | 230 |
MS.gene005613.t1 | MTR_6g023875 | 40.741 | 243 | 134 | 5 | 931 | 1169 | 379 | 615 | 1.32e-45 | 176 |
MS.gene005613.t1 | MTR_6g023855 | 40.928 | 237 | 129 | 6 | 934 | 1165 | 246 | 476 | 5.40e-44 | 168 |
MS.gene005613.t1 | MTR_7g075520 | 39.565 | 230 | 134 | 4 | 934 | 1162 | 212 | 437 | 1.28e-42 | 163 |
MS.gene005613.t1 | MTR_4g011810 | 37.600 | 250 | 146 | 4 | 917 | 1160 | 226 | 471 | 1.77e-42 | 164 |
MS.gene005613.t1 | MTR_4g096870 | 39.095 | 243 | 134 | 7 | 934 | 1169 | 119 | 354 | 7.22e-39 | 150 |
MS.gene005613.t1 | MTR_2g086160 | 37.557 | 221 | 132 | 5 | 934 | 1153 | 132 | 347 | 3.82e-37 | 144 |
MS.gene005613.t1 | MTR_2g086160 | 37.727 | 220 | 131 | 5 | 934 | 1152 | 132 | 346 | 2.97e-36 | 143 |
MS.gene005613.t1 | MTR_6g023865 | 37.302 | 252 | 130 | 7 | 934 | 1165 | 158 | 401 | 9.20e-36 | 143 |
MS.gene005613.t1 | MTR_4g053350 | 37.273 | 220 | 132 | 5 | 934 | 1152 | 127 | 341 | 1.46e-35 | 141 |
MS.gene005613.t1 | MTR_4g053350 | 37.273 | 220 | 132 | 5 | 934 | 1152 | 127 | 341 | 1.84e-35 | 141 |
MS.gene005613.t1 | MTR_1g063380 | 35.443 | 237 | 145 | 5 | 934 | 1166 | 478 | 710 | 1.99e-31 | 133 |
MS.gene005613.t1 | MTR_1g063380 | 34.335 | 233 | 146 | 5 | 934 | 1164 | 205 | 432 | 4.05e-27 | 119 |
MS.gene005613.t1 | MTR_6g023845 | 36.864 | 236 | 112 | 8 | 934 | 1165 | 116 | 318 | 5.89e-31 | 126 |
MS.gene005613.t1 | MTR_7g101870 | 35.169 | 236 | 145 | 6 | 935 | 1166 | 480 | 711 | 1.88e-30 | 130 |
MS.gene005613.t1 | MTR_7g101870 | 33.906 | 233 | 147 | 5 | 934 | 1164 | 206 | 433 | 1.22e-26 | 118 |
MS.gene005613.t1 | MTR_2g095210 | 35.021 | 237 | 146 | 5 | 934 | 1166 | 406 | 638 | 3.09e-30 | 129 |
MS.gene005613.t1 | MTR_7g089040 | 32.900 | 231 | 148 | 5 | 934 | 1161 | 685 | 911 | 3.06e-26 | 117 |
MS.gene005613.t1 | MTR_7g089040 | 28.643 | 199 | 135 | 5 | 973 | 1168 | 422 | 616 | 2.23e-12 | 72.0 |
MS.gene005613.t1 | MTR_3g117230 | 30.870 | 230 | 153 | 5 | 934 | 1160 | 139 | 365 | 8.10e-26 | 112 |
MS.gene005613.t1 | MTR_2g095320 | 34.468 | 235 | 137 | 6 | 934 | 1166 | 421 | 640 | 8.38e-26 | 115 |
MS.gene005613.t1 | MTR_2g095320 | 32.189 | 233 | 147 | 6 | 934 | 1164 | 153 | 376 | 3.17e-22 | 103 |
MS.gene005613.t1 | MTR_7g088830 | 32.900 | 231 | 148 | 5 | 934 | 1161 | 658 | 884 | 2.31e-25 | 114 |
MS.gene005613.t1 | MTR_7g088850 | 32.636 | 239 | 153 | 5 | 934 | 1168 | 282 | 516 | 2.39e-25 | 112 |
MS.gene005613.t1 | MTR_3g112260 | 30.435 | 230 | 154 | 5 | 934 | 1160 | 136 | 362 | 5.76e-25 | 109 |
MS.gene005613.t1 | MTR_1g069105 | 32.759 | 232 | 146 | 6 | 935 | 1161 | 189 | 415 | 2.04e-23 | 105 |
MS.gene005613.t1 | MTR_7g099640 | 32.759 | 232 | 146 | 6 | 935 | 1161 | 188 | 414 | 8.03e-23 | 103 |
MS.gene005613.t1 | MTR_7g099640 | 32.759 | 232 | 146 | 6 | 935 | 1161 | 188 | 414 | 1.04e-22 | 102 |
MS.gene005613.t1 | MTR_1g083330 | 31.304 | 230 | 148 | 6 | 936 | 1160 | 169 | 393 | 7.52e-22 | 100 |
MS.gene005613.t1 | MTR_4g033235 | 31.169 | 231 | 149 | 6 | 935 | 1160 | 169 | 394 | 7.74e-22 | 100 |
MS.gene005613.t1 | MTR_3g104470 | 28.947 | 304 | 190 | 11 | 859 | 1155 | 157 | 441 | 1.66e-21 | 101 |
MS.gene005613.t1 | MTR_1g095660 | 30.544 | 239 | 148 | 7 | 934 | 1160 | 118 | 350 | 2.46e-21 | 98.2 |
MS.gene005613.t1 | MTR_7g088980 | 30.172 | 232 | 154 | 5 | 934 | 1161 | 136 | 363 | 1.38e-20 | 96.3 |
MS.gene005613.t1 | MTR_7g088980 | 30.172 | 232 | 154 | 5 | 934 | 1161 | 286 | 513 | 2.37e-20 | 97.1 |
MS.gene005613.t1 | MTR_3g104480 | 30.182 | 275 | 167 | 10 | 887 | 1155 | 184 | 439 | 2.41e-20 | 97.8 |
MS.gene005613.t1 | MTR_7g088980 | 30.172 | 232 | 154 | 5 | 934 | 1161 | 312 | 539 | 5.01e-20 | 96.3 |
MS.gene005613.t1 | MTR_7g088980 | 30.172 | 232 | 154 | 5 | 934 | 1161 | 218 | 445 | 5.40e-20 | 95.5 |
MS.gene005613.t1 | MTR_7g010800 | 31.513 | 238 | 152 | 7 | 933 | 1165 | 205 | 436 | 7.76e-20 | 95.9 |
MS.gene005613.t1 | MTR_8g023550 | 29.741 | 232 | 138 | 6 | 934 | 1160 | 165 | 376 | 1.92e-19 | 92.8 |
MS.gene005613.t1 | MTR_4g094270 | 28.755 | 233 | 155 | 6 | 935 | 1161 | 157 | 384 | 2.10e-19 | 92.8 |
MS.gene005613.t1 | MTR_3g115110 | 30.677 | 251 | 153 | 10 | 927 | 1166 | 244 | 484 | 2.31e-19 | 94.4 |
MS.gene005613.t1 | MTR_4g094662 | 31.140 | 228 | 146 | 7 | 933 | 1155 | 228 | 449 | 3.85e-19 | 93.6 |
MS.gene005613.t1 | MTR_2g438140 | 30.702 | 228 | 147 | 7 | 933 | 1155 | 285 | 506 | 6.59e-19 | 92.8 |
MS.gene005613.t1 | MTR_2g438140 | 30.702 | 228 | 147 | 7 | 933 | 1155 | 225 | 446 | 8.16e-19 | 92.8 |
MS.gene005613.t1 | MTR_2g007010 | 30.705 | 241 | 155 | 7 | 933 | 1167 | 237 | 471 | 9.82e-19 | 92.8 |
MS.gene005613.t1 | MTR_2g007010 | 27.350 | 234 | 161 | 6 | 934 | 1163 | 528 | 756 | 2.37e-17 | 88.2 |
MS.gene005613.t1 | MTR_7g089290 | 28.761 | 226 | 152 | 7 | 934 | 1154 | 639 | 860 | 1.68e-18 | 92.0 |
MS.gene005613.t1 | MTR_3g462930 | 32.627 | 236 | 145 | 8 | 934 | 1161 | 304 | 533 | 1.68e-18 | 92.0 |
MS.gene005613.t1 | MTR_7g089290 | 28.761 | 226 | 152 | 7 | 934 | 1154 | 667 | 888 | 1.77e-18 | 92.0 |
MS.gene005613.t1 | MTR_2g024440 | 25.298 | 336 | 219 | 9 | 839 | 1154 | 194 | 517 | 3.15e-18 | 90.5 |
MS.gene005613.t1 | MTR_2g024440 | 27.155 | 232 | 148 | 6 | 934 | 1154 | 297 | 518 | 3.39e-18 | 90.1 |
MS.gene005613.t1 | MTR_5g069780 | 31.304 | 230 | 144 | 8 | 934 | 1155 | 313 | 536 | 5.27e-18 | 90.1 |
MS.gene005613.t1 | MTR_2g024440 | 27.155 | 232 | 148 | 6 | 934 | 1154 | 214 | 435 | 6.06e-18 | 89.0 |
MS.gene005613.t1 | MTR_3g062510 | 29.741 | 232 | 155 | 5 | 934 | 1161 | 159 | 386 | 9.07e-18 | 87.8 |
MS.gene005613.t1 | MTR_4g067100 | 30.769 | 247 | 155 | 8 | 931 | 1169 | 377 | 615 | 5.67e-17 | 87.4 |
MS.gene005613.t1 | MTR_4g067100 | 30.769 | 247 | 155 | 8 | 931 | 1169 | 377 | 615 | 5.81e-17 | 87.4 |
MS.gene005613.t1 | MTR_6g016600 | 31.356 | 236 | 152 | 7 | 929 | 1160 | 312 | 541 | 6.08e-17 | 86.3 |
MS.gene005613.t1 | MTR_7g078570 | 28.936 | 235 | 153 | 7 | 934 | 1160 | 192 | 420 | 2.59e-16 | 84.3 |
MS.gene005613.t1 | MTR_3g023900 | 26.400 | 250 | 159 | 8 | 934 | 1163 | 531 | 775 | 3.14e-16 | 84.7 |
MS.gene005613.t1 | MTR_5g075340 | 29.004 | 231 | 154 | 6 | 928 | 1155 | 223 | 446 | 4.71e-16 | 84.0 |
MS.gene005613.t1 | MTR_2g101290 | 29.060 | 234 | 157 | 6 | 932 | 1161 | 413 | 641 | 9.88e-16 | 82.8 |
MS.gene005613.t1 | MTR_4g064350 | 28.632 | 234 | 155 | 7 | 934 | 1160 | 320 | 548 | 1.19e-15 | 82.8 |
MS.gene005613.t1 | MTR_7g096060 | 27.468 | 233 | 159 | 6 | 934 | 1160 | 240 | 468 | 2.05e-15 | 81.6 |
MS.gene005613.t1 | MTR_2g101290 | 29.060 | 234 | 157 | 6 | 932 | 1161 | 413 | 641 | 2.14e-15 | 82.0 |
MS.gene005613.t1 | MTR_1g028390 | 28.750 | 240 | 157 | 8 | 920 | 1155 | 316 | 545 | 2.35e-15 | 81.6 |
MS.gene005613.t1 | MTR_8g099605 | 28.099 | 242 | 155 | 7 | 933 | 1161 | 403 | 638 | 8.66e-15 | 80.1 |
MS.gene005613.t1 | MTR_0376s0020 | 29.167 | 240 | 145 | 9 | 934 | 1160 | 1 | 228 | 9.60e-15 | 79.3 |
MS.gene005613.t1 | MTR_8g099605 | 28.099 | 242 | 155 | 7 | 933 | 1161 | 162 | 397 | 1.58e-14 | 79.0 |
MS.gene005613.t1 | MTR_1g101880 | 39.326 | 89 | 27 | 1 | 1077 | 1165 | 154 | 215 | 2.32e-13 | 72.0 |
MS.gene005613.t1 | MTR_8g056860 | 30.131 | 229 | 139 | 8 | 944 | 1160 | 480 | 699 | 6.88e-12 | 70.5 |
MS.gene005613.t1 | MTR_3g023890 | 27.835 | 194 | 133 | 5 | 934 | 1125 | 385 | 573 | 6.76e-11 | 67.0 |
MS.gene005613.t1 | MTR_3g104490 | 27.074 | 229 | 137 | 8 | 928 | 1154 | 201 | 401 | 8.16e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005613.t1 | AT4G02480 | 60.113 | 1058 | 396 | 18 | 118 | 1163 | 145 | 1188 | 0.0 | 1216 |
MS.gene005613.t1 | AT1G02890 | 55.824 | 1202 | 469 | 22 | 1 | 1168 | 1 | 1174 | 0.0 | 1194 |
MS.gene005613.t1 | AT1G02890 | 54.659 | 1202 | 455 | 22 | 1 | 1168 | 1 | 1146 | 0.0 | 1153 |
MS.gene005613.t1 | AT4G24860 | 46.970 | 858 | 379 | 14 | 343 | 1168 | 210 | 1023 | 0.0 | 684 |
MS.gene005613.t1 | AT4G24860 | 46.101 | 872 | 389 | 14 | 343 | 1168 | 210 | 1046 | 0.0 | 675 |
MS.gene005613.t1 | AT1G62130 | 46.920 | 763 | 308 | 17 | 412 | 1167 | 291 | 963 | 0.0 | 609 |
MS.gene005613.t1 | AT1G62130 | 33.333 | 135 | 89 | 1 | 88 | 221 | 62 | 196 | 2.30e-15 | 82.0 |
MS.gene005613.t1 | AT1G62130 | 46.789 | 763 | 316 | 16 | 412 | 1167 | 291 | 970 | 0.0 | 609 |
MS.gene005613.t1 | AT1G62130 | 28.837 | 215 | 112 | 3 | 8 | 221 | 22 | 196 | 1.98e-15 | 82.4 |
MS.gene005613.t1 | AT4G24860 | 54.078 | 564 | 220 | 7 | 612 | 1168 | 519 | 1050 | 0.0 | 579 |
MS.gene005613.t1 | AT4G24860 | 39.037 | 187 | 99 | 3 | 343 | 514 | 201 | 387 | 5.05e-24 | 110 |
MS.gene005613.t1 | AT4G24860 | 53.901 | 564 | 219 | 7 | 612 | 1168 | 519 | 1048 | 0.0 | 578 |
MS.gene005613.t1 | AT4G24860 | 39.037 | 187 | 99 | 3 | 343 | 514 | 201 | 387 | 4.75e-24 | 110 |
MS.gene005613.t1 | AT3G19740 | 33.252 | 818 | 448 | 21 | 411 | 1168 | 155 | 934 | 1.77e-115 | 383 |
MS.gene005613.t1 | AT1G64110 | 38.776 | 539 | 241 | 8 | 678 | 1167 | 251 | 749 | 1.74e-111 | 368 |
MS.gene005613.t1 | AT1G64110 | 44.706 | 85 | 45 | 1 | 422 | 506 | 55 | 137 | 1.43e-14 | 79.3 |
MS.gene005613.t1 | AT1G64110 | 38.776 | 539 | 241 | 8 | 678 | 1167 | 251 | 749 | 1.74e-111 | 368 |
MS.gene005613.t1 | AT1G64110 | 44.706 | 85 | 45 | 1 | 422 | 506 | 55 | 137 | 1.43e-14 | 79.3 |
MS.gene005613.t1 | AT1G64110 | 38.776 | 539 | 241 | 8 | 678 | 1167 | 246 | 744 | 1.86e-111 | 368 |
MS.gene005613.t1 | AT1G64110 | 44.706 | 85 | 45 | 1 | 422 | 506 | 50 | 132 | 1.43e-14 | 79.3 |
MS.gene005613.t1 | AT1G64110 | 38.776 | 539 | 241 | 8 | 678 | 1167 | 249 | 747 | 2.01e-111 | 368 |
MS.gene005613.t1 | AT1G64110 | 44.706 | 85 | 45 | 1 | 422 | 506 | 55 | 137 | 1.37e-14 | 79.3 |
MS.gene005613.t1 | AT1G64110 | 38.776 | 539 | 241 | 8 | 678 | 1167 | 249 | 747 | 2.01e-111 | 368 |
MS.gene005613.t1 | AT1G64110 | 44.706 | 85 | 45 | 1 | 422 | 506 | 55 | 137 | 1.37e-14 | 79.3 |
MS.gene005613.t1 | AT1G50140 | 33.048 | 817 | 453 | 21 | 411 | 1168 | 141 | 922 | 1.59e-110 | 369 |
MS.gene005613.t1 | AT1G50140 | 33.048 | 817 | 453 | 21 | 411 | 1168 | 141 | 922 | 1.59e-110 | 369 |
MS.gene005613.t1 | AT5G52882 | 38.961 | 539 | 238 | 10 | 678 | 1167 | 248 | 744 | 3.00e-108 | 359 |
MS.gene005613.t1 | AT5G52882 | 40.426 | 94 | 54 | 1 | 413 | 506 | 44 | 135 | 5.90e-13 | 73.9 |
MS.gene005613.t1 | AT4G28000 | 38.219 | 539 | 244 | 9 | 678 | 1166 | 247 | 746 | 1.62e-106 | 354 |
MS.gene005613.t1 | AT4G28000 | 41.489 | 94 | 53 | 1 | 413 | 506 | 44 | 135 | 5.92e-14 | 77.4 |
MS.gene005613.t1 | AT4G28000 | 38.219 | 539 | 244 | 9 | 678 | 1166 | 247 | 746 | 4.59e-106 | 353 |
MS.gene005613.t1 | AT4G28000 | 41.489 | 94 | 53 | 1 | 413 | 506 | 44 | 135 | 6.96e-14 | 77.0 |
MS.gene005613.t1 | AT4G28000 | 38.175 | 537 | 245 | 9 | 678 | 1166 | 247 | 744 | 1.47e-105 | 352 |
MS.gene005613.t1 | AT4G28000 | 41.489 | 94 | 53 | 1 | 413 | 506 | 44 | 135 | 6.65e-14 | 77.0 |
MS.gene005613.t1 | AT1G50140 | 42.857 | 385 | 218 | 2 | 784 | 1168 | 562 | 944 | 1.40e-96 | 331 |
MS.gene005613.t1 | AT1G50140 | 40.816 | 98 | 57 | 1 | 411 | 507 | 141 | 238 | 5.30e-12 | 70.9 |
MS.gene005613.t1 | AT1G50140 | 42.857 | 385 | 218 | 2 | 784 | 1168 | 562 | 944 | 1.40e-96 | 331 |
MS.gene005613.t1 | AT1G50140 | 40.816 | 98 | 57 | 1 | 411 | 507 | 141 | 238 | 5.30e-12 | 70.9 |
MS.gene005613.t1 | AT1G50140 | 42.857 | 385 | 218 | 2 | 784 | 1168 | 562 | 944 | 1.40e-96 | 331 |
MS.gene005613.t1 | AT1G50140 | 40.816 | 98 | 57 | 1 | 411 | 507 | 141 | 238 | 5.30e-12 | 70.9 |
MS.gene005613.t1 | AT4G27680 | 43.590 | 273 | 152 | 2 | 896 | 1168 | 43 | 313 | 3.40e-68 | 235 |
MS.gene005613.t1 | AT5G53540 | 42.491 | 273 | 155 | 2 | 896 | 1168 | 46 | 316 | 1.77e-66 | 230 |
MS.gene005613.t1 | AT3G27120 | 40.084 | 237 | 136 | 5 | 931 | 1165 | 397 | 629 | 1.64e-43 | 170 |
MS.gene005613.t1 | AT2G45500 | 39.130 | 230 | 135 | 4 | 934 | 1162 | 80 | 305 | 3.22e-43 | 162 |
MS.gene005613.t1 | AT2G45500 | 39.130 | 230 | 135 | 4 | 934 | 1162 | 80 | 305 | 3.22e-43 | 162 |
MS.gene005613.t1 | AT2G45500 | 39.130 | 230 | 135 | 4 | 934 | 1162 | 213 | 438 | 2.85e-42 | 162 |
MS.gene005613.t1 | AT2G45500 | 39.130 | 230 | 135 | 4 | 934 | 1162 | 217 | 442 | 3.01e-42 | 162 |
MS.gene005613.t1 | AT1G80350 | 38.034 | 234 | 136 | 3 | 933 | 1160 | 235 | 465 | 4.42e-42 | 162 |
MS.gene005613.t1 | AT2G45500 | 39.130 | 230 | 135 | 4 | 934 | 1162 | 223 | 448 | 5.65e-42 | 162 |
MS.gene005613.t1 | AT2G34560 | 37.500 | 232 | 139 | 5 | 934 | 1163 | 100 | 327 | 3.73e-38 | 148 |
MS.gene005613.t1 | AT2G34560 | 37.500 | 232 | 139 | 5 | 934 | 1163 | 109 | 336 | 5.34e-38 | 147 |
MS.gene005613.t1 | AT2G27600 | 36.937 | 222 | 130 | 6 | 934 | 1152 | 129 | 343 | 7.60e-35 | 139 |
MS.gene005613.t1 | AT3G53230 | 35.865 | 237 | 144 | 5 | 934 | 1166 | 478 | 710 | 1.14e-31 | 134 |
MS.gene005613.t1 | AT3G53230 | 33.906 | 233 | 147 | 5 | 934 | 1164 | 205 | 432 | 1.51e-26 | 117 |
MS.gene005613.t1 | AT5G03340 | 35.443 | 237 | 145 | 5 | 934 | 1166 | 477 | 709 | 1.77e-31 | 133 |
MS.gene005613.t1 | AT5G03340 | 33.906 | 233 | 147 | 5 | 934 | 1164 | 204 | 431 | 1.81e-26 | 117 |
MS.gene005613.t1 | AT3G09840 | 34.874 | 238 | 146 | 5 | 934 | 1166 | 477 | 710 | 5.22e-31 | 132 |
MS.gene005613.t1 | AT3G09840 | 33.906 | 233 | 147 | 5 | 934 | 1164 | 204 | 431 | 1.88e-26 | 117 |
MS.gene005613.t1 | AT3G56690 | 34.874 | 238 | 146 | 6 | 934 | 1167 | 721 | 953 | 2.10e-26 | 117 |
MS.gene005613.t1 | AT3G56690 | 30.500 | 200 | 130 | 6 | 970 | 1165 | 416 | 610 | 3.32e-16 | 84.7 |
MS.gene005613.t1 | AT5G43010 | 30.172 | 232 | 152 | 6 | 934 | 1160 | 136 | 362 | 6.80e-25 | 108 |
MS.gene005613.t1 | AT1G45000 | 30.000 | 230 | 155 | 5 | 934 | 1160 | 136 | 362 | 1.93e-24 | 107 |
MS.gene005613.t1 | AT2G20140 | 33.621 | 232 | 144 | 6 | 935 | 1161 | 186 | 412 | 8.95e-24 | 106 |
MS.gene005613.t1 | AT1G53750 | 31.466 | 232 | 149 | 6 | 934 | 1160 | 165 | 391 | 1.54e-23 | 105 |
MS.gene005613.t1 | AT4G29040 | 33.190 | 232 | 145 | 6 | 935 | 1161 | 186 | 412 | 1.85e-23 | 105 |
MS.gene005613.t1 | AT2G26140 | 31.273 | 275 | 164 | 9 | 887 | 1155 | 186 | 441 | 2.20e-23 | 107 |
MS.gene005613.t1 | AT1G53780 | 30.435 | 230 | 150 | 6 | 935 | 1159 | 359 | 583 | 1.91e-22 | 103 |
MS.gene005613.t1 | AT1G53780 | 30.435 | 230 | 150 | 6 | 935 | 1159 | 338 | 562 | 1.93e-22 | 103 |
MS.gene005613.t1 | AT1G53780 | 30.435 | 230 | 150 | 6 | 935 | 1159 | 338 | 562 | 1.93e-22 | 103 |
MS.gene005613.t1 | AT1G53780 | 30.435 | 230 | 150 | 6 | 935 | 1159 | 337 | 561 | 1.94e-22 | 103 |
MS.gene005613.t1 | AT3G05530 | 31.304 | 230 | 148 | 6 | 936 | 1160 | 170 | 394 | 1.41e-21 | 99.4 |
MS.gene005613.t1 | AT1G09100 | 31.304 | 230 | 148 | 6 | 936 | 1160 | 169 | 393 | 1.68e-21 | 99.4 |
MS.gene005613.t1 | AT5G08470 | 30.417 | 240 | 154 | 7 | 934 | 1168 | 832 | 1063 | 1.27e-20 | 99.4 |
MS.gene005613.t1 | AT5G08470 | 30.417 | 240 | 154 | 7 | 934 | 1168 | 841 | 1072 | 1.48e-20 | 99.0 |
MS.gene005613.t1 | AT4G04180 | 26.446 | 242 | 163 | 6 | 934 | 1167 | 316 | 550 | 1.91e-20 | 97.4 |
MS.gene005613.t1 | AT4G04180 | 26.446 | 242 | 163 | 6 | 934 | 1167 | 311 | 545 | 2.41e-20 | 97.4 |
MS.gene005613.t1 | AT1G03000 | 27.113 | 284 | 196 | 8 | 878 | 1154 | 597 | 876 | 4.58e-20 | 97.1 |
MS.gene005613.t1 | AT1G50250 | 30.677 | 251 | 153 | 10 | 927 | 1166 | 254 | 494 | 1.20e-19 | 95.5 |
MS.gene005613.t1 | AT2G30950 | 31.140 | 228 | 146 | 7 | 933 | 1155 | 223 | 444 | 1.55e-19 | 95.1 |
MS.gene005613.t1 | AT2G30950 | 31.140 | 228 | 146 | 7 | 933 | 1155 | 223 | 444 | 1.55e-19 | 95.1 |
MS.gene005613.t1 | AT2G30950 | 31.140 | 228 | 146 | 7 | 933 | 1155 | 223 | 444 | 1.55e-19 | 95.1 |
MS.gene005613.t1 | AT2G30950 | 31.140 | 228 | 146 | 7 | 933 | 1155 | 227 | 448 | 1.89e-19 | 94.7 |
MS.gene005613.t1 | AT5G19990 | 29.185 | 233 | 154 | 6 | 935 | 1161 | 101 | 328 | 2.47e-19 | 91.7 |
MS.gene005613.t1 | AT5G19990 | 29.185 | 233 | 154 | 6 | 935 | 1161 | 159 | 386 | 3.46e-19 | 92.0 |
MS.gene005613.t1 | AT5G19990 | 29.185 | 233 | 154 | 6 | 935 | 1161 | 159 | 386 | 3.46e-19 | 92.0 |
MS.gene005613.t1 | AT5G20000 | 29.185 | 233 | 154 | 6 | 935 | 1161 | 159 | 386 | 4.70e-19 | 91.7 |
MS.gene005613.t1 | AT3G47060 | 31.441 | 229 | 145 | 7 | 934 | 1155 | 322 | 545 | 6.50e-19 | 93.2 |
MS.gene005613.t1 | AT5G42270 | 29.880 | 251 | 155 | 10 | 927 | 1166 | 242 | 482 | 7.45e-19 | 92.8 |
MS.gene005613.t1 | AT5G15250 | 30.870 | 230 | 148 | 7 | 931 | 1155 | 218 | 441 | 8.74e-19 | 92.8 |
MS.gene005613.t1 | AT1G06430 | 30.702 | 228 | 147 | 7 | 933 | 1155 | 216 | 437 | 1.57e-18 | 91.7 |
MS.gene005613.t1 | AT1G06430 | 30.702 | 228 | 147 | 7 | 933 | 1155 | 216 | 437 | 1.57e-18 | 91.7 |
MS.gene005613.t1 | AT1G06430 | 30.702 | 228 | 147 | 7 | 933 | 1155 | 216 | 437 | 1.57e-18 | 91.7 |
MS.gene005613.t1 | AT3G01610 | 28.755 | 233 | 157 | 6 | 934 | 1163 | 525 | 751 | 4.79e-18 | 90.5 |
MS.gene005613.t1 | AT3G01610 | 28.163 | 245 | 163 | 5 | 933 | 1167 | 229 | 470 | 7.35e-18 | 89.7 |
MS.gene005613.t1 | AT3G01610 | 28.755 | 233 | 157 | 6 | 934 | 1163 | 525 | 751 | 4.97e-18 | 90.5 |
MS.gene005613.t1 | AT3G01610 | 28.163 | 245 | 163 | 5 | 933 | 1167 | 229 | 470 | 7.56e-18 | 89.7 |
MS.gene005613.t1 | AT5G58290 | 29.741 | 232 | 155 | 5 | 934 | 1161 | 152 | 379 | 1.35e-17 | 87.0 |
MS.gene005613.t1 | AT2G03670 | 28.755 | 233 | 157 | 5 | 934 | 1161 | 283 | 511 | 3.08e-17 | 87.4 |
MS.gene005613.t1 | AT2G03670 | 28.378 | 222 | 152 | 4 | 938 | 1154 | 23 | 242 | 3.24e-12 | 71.2 |
MS.gene005613.t1 | AT1G05910 | 30.738 | 244 | 153 | 8 | 934 | 1169 | 378 | 613 | 3.51e-17 | 88.2 |
MS.gene005613.t1 | AT5G58870 | 29.694 | 229 | 149 | 7 | 934 | 1155 | 326 | 549 | 3.94e-17 | 87.4 |
MS.gene005613.t1 | AT5G53170 | 29.167 | 240 | 156 | 8 | 920 | 1155 | 346 | 575 | 1.55e-16 | 85.5 |
MS.gene005613.t1 | AT1G07510 | 27.897 | 233 | 158 | 6 | 934 | 1160 | 324 | 552 | 3.19e-16 | 84.7 |
MS.gene005613.t1 | AT3G02450 | 30.603 | 232 | 151 | 7 | 934 | 1161 | 331 | 556 | 5.79e-16 | 83.6 |
MS.gene005613.t1 | AT3G16290 | 29.060 | 234 | 157 | 6 | 932 | 1161 | 405 | 633 | 1.62e-15 | 82.4 |
MS.gene005613.t1 | AT5G15250 | 28.063 | 253 | 148 | 8 | 931 | 1155 | 218 | 464 | 3.86e-15 | 80.5 |
MS.gene005613.t1 | AT4G23940 | 28.099 | 242 | 155 | 7 | 933 | 1161 | 426 | 661 | 7.34e-15 | 80.5 |
MS.gene005613.t1 | AT2G29080 | 27.897 | 233 | 157 | 7 | 934 | 1160 | 319 | 546 | 3.70e-14 | 77.8 |
MS.gene005613.t1 | AT2G03670 | 28.378 | 222 | 152 | 4 | 938 | 1154 | 23 | 242 | 1.29e-12 | 72.0 |
MS.gene005613.t1 | AT1G79560 | 28.511 | 235 | 137 | 9 | 944 | 1161 | 500 | 720 | 3.11e-11 | 68.6 |
MS.gene005613.t1 | AT1G79560 | 28.511 | 235 | 137 | 9 | 944 | 1161 | 500 | 720 | 3.38e-11 | 68.6 |
MS.gene005613.t1 | AT1G79560 | 28.511 | 235 | 137 | 9 | 944 | 1161 | 500 | 720 | 3.58e-11 | 68.2 |
Find 0 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
8682 | gene | 241 | 11797 | 241 | ID=MS.gene005613 |
8682 | mRNA | 241 | 11797 | 241 | ID=MS.gene005613.t1;Parent=MS.gene005613 |
8682 | exon | 11708 | 11797 | 11708 | ID=MS.gene005613.t1.exon1;Parent=MS.gene005613.t1 |
8682 | CDS | 11708 | 11797 | 11708 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 11435 | 11606 | 11435 | ID=MS.gene005613.t1.exon2;Parent=MS.gene005613.t1 |
8682 | CDS | 11435 | 11606 | 11435 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 11202 | 11320 | 11202 | ID=MS.gene005613.t1.exon3;Parent=MS.gene005613.t1 |
8682 | CDS | 11202 | 11320 | 11202 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 8383 | 8499 | 8383 | ID=MS.gene005613.t1.exon4;Parent=MS.gene005613.t1 |
8682 | CDS | 8383 | 8499 | 8383 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 7978 | 8124 | 7978 | ID=MS.gene005613.t1.exon5;Parent=MS.gene005613.t1 |
8682 | CDS | 7978 | 8124 | 7978 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 7101 | 7777 | 7101 | ID=MS.gene005613.t1.exon6;Parent=MS.gene005613.t1 |
8682 | CDS | 7101 | 7777 | 7101 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 6758 | 6879 | 6758 | ID=MS.gene005613.t1.exon7;Parent=MS.gene005613.t1 |
8682 | CDS | 6758 | 6879 | 6758 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 6561 | 6652 | 6561 | ID=MS.gene005613.t1.exon8;Parent=MS.gene005613.t1 |
8682 | CDS | 6561 | 6652 | 6561 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 6117 | 6348 | 6117 | ID=MS.gene005613.t1.exon9;Parent=MS.gene005613.t1 |
8682 | CDS | 6117 | 6348 | 6117 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 5917 | 5983 | 5917 | ID=MS.gene005613.t1.exon10;Parent=MS.gene005613.t1 |
8682 | CDS | 5917 | 5983 | 5917 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 5193 | 5341 | 5193 | ID=MS.gene005613.t1.exon11;Parent=MS.gene005613.t1 |
8682 | CDS | 5193 | 5341 | 5193 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 5009 | 5082 | 5009 | ID=MS.gene005613.t1.exon12;Parent=MS.gene005613.t1 |
8682 | CDS | 5009 | 5082 | 5009 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 4751 | 4915 | 4751 | ID=MS.gene005613.t1.exon13;Parent=MS.gene005613.t1 |
8682 | CDS | 4751 | 4915 | 4751 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 4572 | 4643 | 4572 | ID=MS.gene005613.t1.exon14;Parent=MS.gene005613.t1 |
8682 | CDS | 4572 | 4643 | 4572 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 4257 | 4358 | 4257 | ID=MS.gene005613.t1.exon15;Parent=MS.gene005613.t1 |
8682 | CDS | 4257 | 4358 | 4257 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 4080 | 4169 | 4080 | ID=MS.gene005613.t1.exon16;Parent=MS.gene005613.t1 |
8682 | CDS | 4080 | 4169 | 4080 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 3269 | 3344 | 3269 | ID=MS.gene005613.t1.exon17;Parent=MS.gene005613.t1 |
8682 | CDS | 3269 | 3344 | 3269 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 3083 | 3179 | 3083 | ID=MS.gene005613.t1.exon18;Parent=MS.gene005613.t1 |
8682 | CDS | 3083 | 3179 | 3083 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 2873 | 2942 | 2873 | ID=MS.gene005613.t1.exon19;Parent=MS.gene005613.t1 |
8682 | CDS | 2873 | 2942 | 2873 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 2540 | 2719 | 2540 | ID=MS.gene005613.t1.exon20;Parent=MS.gene005613.t1 |
8682 | CDS | 2540 | 2719 | 2540 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 2288 | 2410 | 2288 | ID=MS.gene005613.t1.exon21;Parent=MS.gene005613.t1 |
8682 | CDS | 2288 | 2410 | 2288 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 2110 | 2196 | 2110 | ID=MS.gene005613.t1.exon22;Parent=MS.gene005613.t1 |
8682 | CDS | 2110 | 2196 | 2110 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 641 | 825 | 641 | ID=MS.gene005613.t1.exon23;Parent=MS.gene005613.t1 |
8682 | CDS | 641 | 825 | 641 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 404 | 542 | 404 | ID=MS.gene005613.t1.exon24;Parent=MS.gene005613.t1 |
8682 | CDS | 404 | 542 | 404 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
8682 | exon | 241 | 304 | 241 | ID=MS.gene005613.t1.exon25;Parent=MS.gene005613.t1 |
8682 | CDS | 241 | 304 | 241 | ID=cds.MS.gene005613.t1;Parent=MS.gene005613.t1 |
Gene Sequence |
Protein sequence |