AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005946

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005946.t1 MTR_0002s0890 81.835 1057 168 6 1 1039 1 1051 0.0 1735
MS.gene005946.t1 MTR_1g094010 95.413 654 19 2 1 654 1 643 0.0 1276
MS.gene005946.t1 MTR_1g094000 99.708 342 1 0 698 1039 1 342 0.0 711
MS.gene005946.t1 MTR_8g463920 46.440 618 282 5 455 1039 366 967 7.62e-180 550
MS.gene005946.t1 MTR_8g463920 38.603 272 154 5 71 329 77 348 2.77e-48 187
MS.gene005946.t1 MTR_4g079860 45.994 624 288 5 449 1039 359 966 1.93e-179 548
MS.gene005946.t1 MTR_4g079860 38.869 283 157 6 71 337 77 359 1.19e-50 194
MS.gene005946.t1 MTR_2g092930 45.353 624 292 5 449 1039 359 966 5.19e-176 540
MS.gene005946.t1 MTR_2g092930 39.576 283 155 6 71 337 77 359 3.05e-51 196
MS.gene005946.t1 MTR_2g076670 45.806 620 283 6 455 1039 365 966 2.31e-174 535
MS.gene005946.t1 MTR_2g076670 38.603 272 154 5 71 329 76 347 3.35e-48 187
MS.gene005946.t1 MTR_8g463920 50.288 521 241 4 455 973 366 870 5.37e-168 516
MS.gene005946.t1 MTR_8g463920 38.603 272 154 5 71 329 77 348 2.43e-48 186
MS.gene005946.t1 MTR_1g009850 35.031 491 196 10 551 1039 1 370 1.83e-70 239
MS.gene005946.t1 MTR_7g060030 51.323 189 52 5 153 333 29 185 2.06e-46 165
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005946.t1 AT1G68750 75.985 1041 239 4 1 1039 1 1032 0.0 1599
MS.gene005946.t1 AT2G42600 46.709 623 284 6 449 1039 357 963 2.87e-178 545
MS.gene005946.t1 AT2G42600 36.667 300 167 7 71 355 77 368 8.93e-48 185
MS.gene005946.t1 AT2G42600 46.709 623 284 6 449 1039 357 963 2.87e-178 545
MS.gene005946.t1 AT2G42600 36.667 300 167 7 71 355 77 368 8.93e-48 185
MS.gene005946.t1 AT2G42600 46.709 623 284 6 449 1039 357 963 2.87e-178 545
MS.gene005946.t1 AT2G42600 36.667 300 167 7 71 355 77 368 8.93e-48 185
MS.gene005946.t1 AT1G53310 46.440 618 282 5 455 1039 366 967 4.46e-178 545
MS.gene005946.t1 AT1G53310 38.079 302 163 7 71 355 77 371 2.92e-50 193
MS.gene005946.t1 AT1G53310 46.440 618 282 5 455 1039 366 967 4.46e-178 545
MS.gene005946.t1 AT1G53310 38.079 302 163 7 71 355 77 371 2.92e-50 193
MS.gene005946.t1 AT1G53310 46.440 618 282 5 455 1039 366 967 4.46e-178 545
MS.gene005946.t1 AT1G53310 38.079 302 163 7 71 355 77 371 2.92e-50 193
MS.gene005946.t1 AT3G14940 46.688 619 280 6 455 1039 366 968 1.17e-175 539
MS.gene005946.t1 AT3G14940 39.073 302 160 8 71 355 77 371 1.76e-51 197
MS.gene005946.t1 AT3G14940 46.688 619 280 6 455 1039 366 968 1.17e-175 539
MS.gene005946.t1 AT3G14940 39.073 302 160 8 71 355 77 371 1.76e-51 197

Find 277 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAGCATCTCTGAGTTTA+AGG 0.106305 1.3:+65849117 None:intergenic
CATCCAAGTTCCAAACTTTA+TGG 0.132919 1.3:+65855882 None:intergenic
GCTTTGCTTATCACCGTAAA+TGG 0.145481 1.3:-65849101 MS.gene005946:CDS
TGATGCAGTTACAACATATT+TGG 0.164824 1.3:-65852377 MS.gene005946:CDS
CTTCAACATGTAGCATCTTT+TGG 0.216012 1.3:-65856483 MS.gene005946:intron
AGTTACAACATATTTGGATA+TGG 0.231474 1.3:-65852371 MS.gene005946:CDS
TTTGTGTTCTTCCTTCTTGC+AGG 0.245866 1.3:+65849587 None:intergenic
ATGGTTGGATATTCTGATTC+TGG 0.258407 1.3:-65850613 MS.gene005946:CDS
ATTAGCATTTCTCGATCTTC+AGG 0.268596 1.3:+65856434 None:intergenic
GAAATGGTAGAGGCGAAGTT+TGG 0.269532 1.3:-65849845 MS.gene005946:CDS
CTCTAAAAGCTTCTGAAAAC+TGG 0.293404 1.3:+65853469 None:intergenic
TCCCACCCCGAGATGAAAAT+TGG 0.299079 1.3:-65849748 MS.gene005946:CDS
TGAAACAGCTGACCAGCTTT+TGG 0.305920 1.3:-65852704 MS.gene005946:CDS
CCCAGCAGCAATCCCATTTA+CGG 0.307234 1.3:+65849088 None:intergenic
ATGGGATGAAGAAAAGAAAT+TGG 0.307389 1.3:-65852335 MS.gene005946:CDS
AGAAACTTCAGCAGAATAAT+AGG 0.308883 1.3:-65849238 MS.gene005946:CDS
GCTTGCTGCTATTGGAGAAT+TGG 0.313039 1.3:-65851281 MS.gene005946:CDS
CTTCAGCAATCATGTGGGTC+TGG 0.317808 1.3:-65852581 MS.gene005946:intron
CTCACCTTTGCGGTAACGTT+TGG 0.334654 1.3:+65855838 None:intergenic
GACCTTATTGAGATGGTGTT+AGG 0.335377 1.3:-65849392 MS.gene005946:CDS
CTATTCCCTGGGTATTTGCT+TGG 0.336715 1.3:-65849544 MS.gene005946:CDS
GTAGCTGCTTGCAATGATTA+TGG 0.337387 1.3:-65850532 MS.gene005946:CDS
ATTCGTAGAGTTGCAACCTT+TGG 0.349488 1.3:-65852527 MS.gene005946:CDS
TGGCTATTGACCTCTATATT+CGG 0.351376 1.3:-65855518 MS.gene005946:CDS
CTGTTTCACTTCTATCTAGA+TGG 0.356352 1.3:-65855542 MS.gene005946:CDS
ACTTGCACTCCCATAAAGTT+TGG 0.358450 1.3:-65855892 MS.gene005946:CDS
CAGTCATTATCTTACTATGA+TGG 0.363104 1.3:-65857434 MS.gene005946:CDS
GCCACTAGTTCCTGTTAGTA+TGG 0.363267 1.3:-65852281 MS.gene005946:CDS
TCTCACAGGTTTGAATATAG+TGG 0.366572 1.3:-65856083 MS.gene005946:intron
GGTTCGTAAAGGAGGGAATA+TGG 0.367321 1.3:-65857014 MS.gene005946:CDS
CTAGCTGCATTACAGGAATC+TGG 0.367694 1.3:-65852418 MS.gene005946:intron
TTCAGCAATCATGTGGGTCT+GGG 0.368013 1.3:-65852580 MS.gene005946:intron
CAATCCCATGAACCTGTTGC+AGG 0.368697 1.3:-65849177 MS.gene005946:CDS
AGGAAGAACACAAAGGGAAT+TGG 0.369646 1.3:-65849578 MS.gene005946:CDS
TAACTGAACCAGCACCTCTT+AGG 0.373958 1.3:+65850795 None:intergenic
GATGCACGGCTTGCTGCTAT+TGG 0.377320 1.3:-65851289 MS.gene005946:CDS
ATCCAAGTTCCAAACTTTAT+GGG 0.378571 1.3:+65855883 None:intergenic
CTGCTTCAGGCGTGGCTTCG+TGG 0.378796 1.3:+65849639 None:intergenic
TGGCCGCTTCACTGCTGCTT+GGG 0.379895 1.3:-65850581 MS.gene005946:CDS
TTTCCCAGGACAACTCTATA+AGG 0.392064 1.3:+65853416 None:intergenic
CTTCCAGCTTGGCTCGGAGT+TGG 0.392451 1.3:-65849503 MS.gene005946:CDS
AGTCTATTGATAAAAGTTTC+CGG 0.395571 1.3:+65850771 None:intergenic
CTGGCCGCTTCACTGCTGCT+TGG 0.395587 1.3:-65850582 MS.gene005946:CDS
CTAGCACATGAAATTCTAGA+AGG 0.398688 1.3:-65855435 MS.gene005946:intron
TAATAGGAGCTTGAGGAGGT+TGG 0.402520 1.3:-65849222 MS.gene005946:CDS
TGCTCCTTATAGAGTTGTCC+TGG 0.405365 1.3:-65853420 MS.gene005946:CDS
TCTATTGTACTTTGAAAGAA+AGG 0.405607 1.3:+65849413 None:intergenic
GCTCCTCTGTTATGAATCTC+TGG 0.406497 1.3:-65852674 MS.gene005946:intron
TTGAAAGGTGCTTGTGAGAA+AGG 0.408319 1.3:-65849473 MS.gene005946:CDS
CTCCCATAAAGTTTGGAACT+TGG 0.409973 1.3:-65855885 MS.gene005946:CDS
CTCCACCTGCAACAGGTTCA+TGG 0.410924 1.3:+65849172 None:intergenic
AGAGCTTCGATGATGATTGT+AGG 0.412316 1.3:-65857943 MS.gene005946:CDS
GCTATTCAGTCCCAACCACC+TGG 0.416046 1.3:-65850442 MS.gene005946:CDS
AGGAGCCTATGTGATATCTA+TGG 0.416320 1.3:-65851457 MS.gene005946:CDS
GAAACCTTCGTGCTATTCCC+TGG 0.416675 1.3:-65849556 MS.gene005946:CDS
ACCGTAAATGGGATTGCTGC+TGG 0.417768 1.3:-65849089 MS.gene005946:CDS
TGCTGATGTTAAAGAAGTCT+TGG 0.419254 1.3:-65851520 MS.gene005946:CDS
AGAGCCACAGCTCCCTCAAC+TGG 0.419317 1.3:-65853450 MS.gene005946:CDS
TGTCTCACCTCCATACTAAC+AGG 0.420987 1.3:+65852271 None:intergenic
TCTACCTTGTGATCAGGTCC+TGG 0.421399 1.3:+65853741 None:intergenic
ACATGTTTACATTAGGTTGC+GGG 0.422004 1.3:-65850846 MS.gene005946:intron
AAATGGTAGAGGCGAAGTTT+GGG 0.422142 1.3:-65849844 MS.gene005946:CDS
TGTTACTGATACTTTAAGAC+TGG 0.424175 1.3:+65853601 None:intergenic
GTTACAACATATTTGGATAT+GGG 0.425578 1.3:-65852370 MS.gene005946:CDS
TCCTTCACGGTTTCAAATAG+AGG 0.428095 1.3:+65850818 None:intergenic
GAGGTGCTGGTTCAGTTATC+CGG 0.429326 1.3:-65850790 MS.gene005946:CDS
GAAAACTGGACTTTCCTGTC+TGG 0.430217 1.3:+65853483 None:intergenic
TTGCCAGTTCTGAGTGTAGT+TGG 0.430252 1.3:+65853626 None:intergenic
CTTGCTGCTATTGGAGAATT+GGG 0.430420 1.3:-65851280 MS.gene005946:CDS
GAGTTGTAAGAGGGAGAAGA+TGG 0.433748 1.3:+65853542 None:intergenic
TCAGAATCTCCACCTGCAAC+AGG 0.436922 1.3:+65849165 None:intergenic
AGGCGGTGGCCCTACATATC+TGG 0.437685 1.3:-65850464 MS.gene005946:CDS
AGAAATGCTAATTGAGGATC+TGG 0.437949 1.3:-65856423 MS.gene005946:intron
TGCATGTGACTATGATCCTT+TGG 0.439479 1.3:-65852734 MS.gene005946:CDS
TCCCTAACACCATCTCAATA+AGG 0.439617 1.3:+65849390 None:intergenic
AACACTTCGGTCTACCGAGC+AGG 0.441668 1.3:-65849870 MS.gene005946:CDS
GGCTATTGACCTCTATATTC+GGG 0.443763 1.3:-65855517 MS.gene005946:CDS
TGAGAGAGATAACTTCAATA+TGG 0.445525 1.3:-65856273 MS.gene005946:CDS
CATGGCCGTGGAGGCAGTAT+TGG 0.446124 1.3:-65850490 MS.gene005946:CDS
CCAGATTTGTTCTTCCAGCT+TGG 0.448126 1.3:-65849514 MS.gene005946:CDS
CCAAGCTGGAAGAACAAATC+TGG 0.448959 1.3:+65849514 None:intergenic
GATGATGATTGTAGGTTACT+TGG 0.449102 1.3:-65857935 MS.gene005946:CDS
GGCAGTATTGGTCGAGGCGG+TGG 0.449566 1.3:-65850478 MS.gene005946:CDS
CCAGCTCTAGCTTCATCAAC+TGG 0.450656 1.3:+65856217 None:intergenic
GTCTACCGAGCAGGGAGAAA+TGG 0.450962 1.3:-65849861 MS.gene005946:CDS
CATAAAGTTTGGAACTTGGA+TGG 0.451055 1.3:-65855881 MS.gene005946:CDS
TTCCGAATCGCTGCTGAACT+AGG 0.451804 1.3:-65851492 MS.gene005946:CDS
TGTTCAGAAGCAGCGTTAAC+CGG 0.452536 1.3:+65849055 None:intergenic
GAGCAATTCCAGCCAGTTGA+GGG 0.453272 1.3:+65853438 None:intergenic
ACTGTGTTGTAAAGATCATC+CGG 0.454214 1.3:+65856932 None:intergenic
AGGAAGCCGAGCTCTGCTTC+AGG 0.462959 1.3:+65849626 None:intergenic
CATCACAGACCCAGGTGGTT+GGG 0.463137 1.3:+65850432 None:intergenic
CTTTGCTTATCACCGTAAAT+GGG 0.463812 1.3:-65849100 MS.gene005946:CDS
ATATGGGTACTTATAGTGAA+TGG 0.464922 1.3:-65852354 MS.gene005946:CDS
TACAATCATCATCGAAGCTC+TGG 0.466446 1.3:+65857945 None:intergenic
CTCTACCATTTCTCCCTGCT+CGG 0.468223 1.3:+65849856 None:intergenic
CCTGGGAAATGTAAAGGATA+AGG 0.469149 1.3:-65853402 MS.gene005946:intron
GGCAGAGTGCATGTAATATG+AGG 0.469229 1.3:-65857558 MS.gene005946:intron
CACTGCAATACAAACACATT+CGG 0.470757 1.3:-65856609 MS.gene005946:CDS
AGTCATTATCTTACTATGAT+GGG 0.472061 1.3:-65857433 MS.gene005946:CDS
GGAGCAGAGGTTCCAAAAGC+TGG 0.475317 1.3:+65852692 None:intergenic
TGAAAATTGGCGTAGTCTCA+TGG 0.476454 1.3:-65849735 MS.gene005946:CDS
TTGTGTTCTTCCTTCTTGCA+GGG 0.476962 1.3:+65849588 None:intergenic
TAAAAGCAATGTACAAAGAA+TGG 0.478411 1.3:-65849436 MS.gene005946:CDS
TGTGCAGGGTGGAGTTTCCC+CGG 0.478623 1.3:-65856951 MS.gene005946:CDS
GCTTGGCTCGGAGTTGGAGC+AGG 0.478720 1.3:-65849497 MS.gene005946:CDS
CCACAGCTCCCTCAACTGGC+TGG 0.479077 1.3:-65853446 MS.gene005946:CDS
TCCCTAGTTCAGCAGCGATT+CGG 0.481902 1.3:+65851490 None:intergenic
TTTGTTCTTCCAGCTTGGCT+CGG 0.482407 1.3:-65849509 MS.gene005946:CDS
AAGACTTCTTTAACATCAGC+AGG 0.482543 1.3:+65851522 None:intergenic
AAAACTGGACTTTCCTGTCT+GGG 0.483522 1.3:+65853484 None:intergenic
AGGTTCATGGGATTGAGAAA+TGG 0.484409 1.3:+65849185 None:intergenic
CGGTTGACTAGAGTTGTAAG+AGG 0.484510 1.3:+65853532 None:intergenic
GAGGGTAAATGAGCTCTAGC+TGG 0.485019 1.3:+65854078 None:intergenic
AAGTTTGTGCTCGTGATTAG+TGG 0.485469 1.3:-65849266 MS.gene005946:CDS
TTAGCATTTCTCGATCTTCA+GGG 0.485732 1.3:+65856435 None:intergenic
ACCTTATTGAGATGGTGTTA+GGG 0.488944 1.3:-65849391 MS.gene005946:CDS
GTTCTGAGTGTAGTTGGACT+TGG 0.489764 1.3:+65853632 None:intergenic
AATTGATCTACCTTGTGATC+AGG 0.496505 1.3:+65853735 None:intergenic
TTGGGAACTTTACAAAGCTC+AGG 0.497178 1.3:-65850563 MS.gene005946:CDS
CAGGGCGACTACCTATGTTC+AGG 0.498058 1.3:+65849606 None:intergenic
GGAGTGCAAGTCAGTGGAAG+TGG 0.498492 1.3:+65855904 None:intergenic
TGTGTTTAACCAGCTTGTGC+AGG 0.501342 1.3:-65856966 MS.gene005946:CDS
GCTCCAACTCCGAGCCAAGC+TGG 0.505446 1.3:+65849500 None:intergenic
ACGAGAATCGCCATGAGAGT+TGG 0.506900 1.3:-65854143 MS.gene005946:CDS
TGACCTCTATATTCGGGAAG+TGG 0.507739 1.3:-65855511 MS.gene005946:CDS
GACATTCTTCACCGTGAAGT+TGG 0.507840 1.3:-65857899 MS.gene005946:CDS
CCATGTCTTCAGCAATCATG+TGG 0.508496 1.3:-65852587 MS.gene005946:intron
AGCACCTCTTAGGTCCTTCA+CGG 0.509480 1.3:+65850805 None:intergenic
CAATACTGCCTCCACGGCCA+TGG 0.510703 1.3:+65850491 None:intergenic
GCTCTAGCTGGAAGCTGTGT+TGG 0.512706 1.3:+65854090 None:intergenic
GAAGAAGTTCTAACCGTCTA+CGG 0.515159 1.3:+65852767 None:intergenic
AATTGAAGATGAAGAACCAT+TGG 0.516879 1.3:+65853565 None:intergenic
CGATCTTCAGGGCTAAGATC+AGG 0.517591 1.3:+65856446 None:intergenic
TCATCTCGGGGTGGGAGAGG+TGG 0.518044 1.3:+65849755 None:intergenic
TATCCACTTCCCGAATATAG+AGG 0.519946 1.3:+65855508 None:intergenic
TCCACCTGCAACAGGTTCAT+GGG 0.520556 1.3:+65849173 None:intergenic
GCCGAGCTCTGCTTCAGGCG+TGG 0.520653 1.3:+65849631 None:intergenic
CCTTATCCTTTACATTTCCC+AGG 0.522515 1.3:+65853402 None:intergenic
TTGTATATGCAGGTTATGGT+TGG 0.523719 1.3:-65850628 MS.gene005946:intron
ATTATGTGTACCAGCAAAAG+AGG 0.526645 1.3:+65854059 None:intergenic
AGTTGTCCTGGGAAATGTAA+AGG 0.527528 1.3:-65853408 MS.gene005946:CDS
TCTGATTCTGGTAAAGATGC+TGG 0.527744 1.3:-65850601 MS.gene005946:CDS
AGTCCAACTACACTCAGAAC+TGG 0.528241 1.3:-65853629 MS.gene005946:CDS
TTACAACACAGTCTGCAAAC+AGG 0.529417 1.3:-65856921 MS.gene005946:intron
AAACCTTCGTGCTATTCCCT+GGG 0.530352 1.3:-65849555 MS.gene005946:CDS
CTTGCCTCTCCTCTGACACA+AGG 0.531845 1.3:+65849330 None:intergenic
GATTTGAGCTATCTATGAAT+CGG 0.532118 1.3:-65855479 MS.gene005946:CDS
TGGAAGTAAGAAAGGAACTC+TGG 0.534013 1.3:+65849659 None:intergenic
ATAAAGTTTGGAACTTGGAT+GGG 0.536672 1.3:-65855880 MS.gene005946:CDS
CTACCTTGTGATCAGGTCCT+GGG 0.537445 1.3:+65853742 None:intergenic
TATGGCAGACAGATGAGCTT+AGG 0.537663 1.3:-65856255 MS.gene005946:CDS
GACTGAATAGCCAGATATGT+AGG 0.537677 1.3:+65850454 None:intergenic
CTAGCTTCATCAACTGGAGT+GGG 0.537880 1.3:+65856223 None:intergenic
GTTACACTGTTCCATGGCCG+TGG 0.538939 1.3:-65850502 MS.gene005946:CDS
TCCGAATCGCTGCTGAACTA+GGG 0.539001 1.3:-65851491 MS.gene005946:CDS
TAGAGTTGCAACCTTTGGAA+TGG 0.539927 1.3:-65852522 MS.gene005946:CDS
TAGCTGCATTACAGGAATCT+GGG 0.541027 1.3:-65852417 MS.gene005946:intron
GTAAATTTCCTCTGAGAAAG+CGG 0.541472 1.3:+65853512 None:intergenic
CAAAGGTGGTACCAACTTCA+CGG 0.542181 1.3:+65857888 None:intergenic
TGTTCGTCGATTAATTTGTG+TGG 0.545050 1.3:+65856630 None:intergenic
GCAAGAAGGAAGAACACAAA+GGG 0.545085 1.3:-65849584 MS.gene005946:CDS
CGTGTTCACAGGGTTCGTAA+AGG 0.546242 1.3:-65857025 MS.gene005946:intron
GGGTGGGAGAGGTGGACGAA+GGG 0.547195 1.3:+65849763 None:intergenic
CTTCATTAAAACCATTCCAA+AGG 0.547879 1.3:+65852511 None:intergenic
AAGGGCTTCATCATAGTACT+TGG 0.548292 1.3:+65849349 None:intergenic
AAAAGTTAGTTACTTGAGCA+AGG 0.549708 1.3:+65857840 None:intergenic
CCATCACAGACCCAGGTGGT+TGG 0.550298 1.3:+65850431 None:intergenic
TATGGGTACTTATAGTGAAT+GGG 0.550472 1.3:-65852353 MS.gene005946:CDS
GGAGTTGGAGCAGGTTTGAA+AGG 0.551309 1.3:-65849488 MS.gene005946:CDS
GTGAAGGACCTAAGAGGTGC+TGG 0.552645 1.3:-65850803 MS.gene005946:CDS
TGGAGATTCTGAAGAGGTTG+AGG 0.553888 1.3:-65849154 MS.gene005946:CDS
GCATGTAATATGAGGCAAGC+AGG 0.554017 1.3:-65857550 MS.gene005946:CDS
AGATCGAGAAATGCTAATTG+AGG 0.554326 1.3:-65856429 MS.gene005946:CDS
TGATGAAGCCCTTGTGTCAG+AGG 0.554453 1.3:-65849339 MS.gene005946:CDS
GTTCACAGGGTTCGTAAAGG+AGG 0.555920 1.3:-65857022 MS.gene005946:intron
TGGCTTCGTGGAAGTAAGAA+AGG 0.556061 1.3:+65849651 None:intergenic
ATGGGATTGCTGCTGGGATG+AGG 0.557054 1.3:-65849082 MS.gene005946:CDS
TCAGCAATCATGTGGGTCTG+GGG 0.558099 1.3:-65852579 MS.gene005946:intron
GGGGTGGGAGAGGTGGACGA+AGG 0.558545 1.3:+65849762 None:intergenic
CCAGTTGATGAAGCTAGAGC+TGG 0.561704 1.3:-65856217 MS.gene005946:intron
GGAGCAATTCCAGCCAGTTG+AGG 0.562357 1.3:+65853437 None:intergenic
AGTTTGTGCTCGTGATTAGT+GGG 0.563717 1.3:-65849265 MS.gene005946:CDS
GCTCCTTATAGAGTTGTCCT+GGG 0.565302 1.3:-65853419 MS.gene005946:CDS
GCCACGCCTGAAGCAGAGCT+CGG 0.565662 1.3:-65849632 MS.gene005946:CDS
AATGAAGCTTGATTTACGCC+AGG 0.565768 1.3:-65852495 MS.gene005946:intron
TGGACTGATTCCAACTCTCA+TGG 0.566823 1.3:+65854133 None:intergenic
GTGTTTAACCAGCTTGTGCA+GGG 0.568664 1.3:-65856965 MS.gene005946:CDS
TACAATAGACCTTATTGAGA+TGG 0.569016 1.3:-65849399 MS.gene005946:CDS
ATTAAAGTTACACTGTTCCA+TGG 0.569596 1.3:-65850508 MS.gene005946:CDS
TTCACTTCTATCTAGATGGA+TGG 0.571403 1.3:-65855538 MS.gene005946:CDS
CTGACACGTCGTAAATAATG+AGG 0.573177 1.3:+65856037 None:intergenic
GATTCATAACAGAGGAGCAG+AGG 0.575099 1.3:+65852679 None:intergenic
GCTGCTGGGATGAGGAATAC+CGG 0.577928 1.3:-65849074 MS.gene005946:CDS
TAGGTAGTCGCCCTGCAAGA+AGG 0.578256 1.3:-65849598 MS.gene005946:CDS
GTTCGTCGATTAATTTGTGT+GGG 0.578693 1.3:+65856631 None:intergenic
GGGTCTGGGGTGCTAGCTGA+TGG 0.578897 1.3:-65852566 MS.gene005946:CDS
CAAGAGAGCTGAAAGGAAAG+AGG 0.580073 1.3:-65852303 MS.gene005946:CDS
GGTCCTGGGATGTCTAGTCT+AGG 0.580848 1.3:+65853756 None:intergenic
CCCTCTATTTGAAACCGTGA+AGG 0.582239 1.3:-65850819 MS.gene005946:CDS
AAACTCCACCCTGCACAAGC+TGG 0.582588 1.3:+65856957 None:intergenic
CCGTAAATGGGATTGCTGCT+GGG 0.582637 1.3:-65849088 MS.gene005946:CDS
AAGTGACTGACTTCTATTCG+TGG 0.582977 1.3:+65854113 None:intergenic
TTCGAGTTTGTCAACAAAGG+TGG 0.583706 1.3:+65857874 None:intergenic
TGTCAGCAATGCTTTAAAGA+AGG 0.584116 1.3:-65856020 MS.gene005946:intron
ATATAGTGGAGCAGTCACTC+TGG 0.585383 1.3:-65856069 MS.gene005946:CDS
GTTCCCAAGCAGCAGTGAAG+CGG 0.586086 1.3:+65850578 None:intergenic
TCCCATGAACCTGTTGCAGG+TGG 0.586186 1.3:-65849174 MS.gene005946:CDS
CCTTCACGGTTTCAAATAGA+GGG 0.586828 1.3:+65850819 None:intergenic
AGCAGAATAATAGGAGCTTG+AGG 0.589386 1.3:-65849229 MS.gene005946:CDS
GTTACTGATACTTTAAGACT+GGG 0.590423 1.3:+65853602 None:intergenic
ACAAGTTCAGAAAATTCCAA+TGG 0.590563 1.3:-65853581 MS.gene005946:CDS
TTGCCTCTCCTCTGACACAA+GGG 0.590774 1.3:+65849331 None:intergenic
AAATCCAAACGTTACCGCAA+AGG 0.593471 1.3:-65855842 MS.gene005946:intron
CTATTCAGTCCCAACCACCT+GGG 0.594998 1.3:-65850441 MS.gene005946:CDS
TTCACAGGGTTCGTAAAGGA+GGG 0.596243 1.3:-65857021 MS.gene005946:intron
GCAAGCAGGTATAGTGAACA+TGG 0.596263 1.3:-65857536 MS.gene005946:CDS
AGCTTGAGAGAAGCCGTAGA+CGG 0.598721 1.3:-65852780 MS.gene005946:CDS
ACTGAATAGCCAGATATGTA+GGG 0.599957 1.3:+65850455 None:intergenic
CCAACCACCTGGGTCTGTGA+TGG 0.600411 1.3:-65850431 MS.gene005946:intron
GGTTCTTAATGACGTGCTCG+CGG 0.600425 1.3:+65850744 None:intergenic
CGTGGAGGCAGTATTGGTCG+AGG 0.601373 1.3:-65850484 MS.gene005946:CDS
CTGTGTTGTAAAGATCATCC+GGG 0.602908 1.3:+65856933 None:intergenic
GAAACCGTGAAGGACCTAAG+AGG 0.603322 1.3:-65850809 MS.gene005946:CDS
TCTAGCTTCATCAACTGGAG+TGG 0.604729 1.3:+65856222 None:intergenic
AAATTTACAGAATCCCAGAC+AGG 0.606640 1.3:-65853497 MS.gene005946:CDS
AAGTTTGGAACTTGGATGGG+AGG 0.608594 1.3:-65855877 MS.gene005946:CDS
TCTTTCGAGTTTGTCAACAA+AGG 0.610094 1.3:+65857871 None:intergenic
TGGATGGGAGGTGATAGAGA+TGG 0.610576 1.3:-65855865 MS.gene005946:CDS
GAACCACAATGGACATCAAG+AGG 0.612446 1.3:-65850726 MS.gene005946:intron
CCAGCCAGTTGAGGGAGCTG+TGG 0.617709 1.3:+65853446 None:intergenic
CATGTCTTCAGCAATCATGT+GGG 0.620570 1.3:-65852586 MS.gene005946:intron
CATCCCAGGACCTGATCACA+AGG 0.620809 1.3:-65853745 MS.gene005946:intron
GTTCCTACTTACGTTCCACC+AGG 0.621553 1.3:+65851247 None:intergenic
GCTGTTTCATAATAATCCAA+AGG 0.621583 1.3:+65852718 None:intergenic
GCACCTCTTGATGTCCATTG+TGG 0.622223 1.3:+65850723 None:intergenic
CGAGCAGGGAGAAATGGTAG+AGG 0.622934 1.3:-65849855 MS.gene005946:CDS
TCAGAGGAGAGGCAAGAACT+CGG 0.623021 1.3:-65849323 MS.gene005946:CDS
TCCATACTAACAGGAACTAG+TGG 0.624015 1.3:+65852280 None:intergenic
CTCGACCAATACTGCCTCCA+CGG 0.625263 1.3:+65850485 None:intergenic
GGAACTTTACAAAGCTCAGG+AGG 0.626662 1.3:-65850560 MS.gene005946:CDS
TTTATGGGAGTGCAAGTCAG+TGG 0.628326 1.3:+65855898 None:intergenic
ACACTTCGGTCTACCGAGCA+GGG 0.629832 1.3:-65849869 MS.gene005946:CDS
TTGAGTCCAAGCAAATACCC+AGG 0.630631 1.3:+65849538 None:intergenic
AAGCCCTTGTGTCAGAGGAG+AGG 0.630970 1.3:-65849334 MS.gene005946:CDS
GGCAATTATTCATACACTCG+AGG 0.633269 1.3:+65851434 None:intergenic
TTTCTTAATTAATAGGACGG+TGG 0.636114 1.3:-65853662 MS.gene005946:intron
CTAGTCAACCGCTTTCTCAG+AGG 0.639378 1.3:-65853520 MS.gene005946:CDS
ACTAGTTCCTGTTAGTATGG+AGG 0.640325 1.3:-65852278 MS.gene005946:intron
TTCTTAACAAGAGAGCTGAA+AGG 0.641838 1.3:-65852310 MS.gene005946:CDS
TTGGGAAGAGCATGTCCTGG+TGG 0.644240 1.3:-65851262 MS.gene005946:CDS
CATCCTAGACTAGACATCCC+AGG 0.647255 1.3:-65853759 MS.gene005946:CDS
ACGGTTAGAACTTCTTCTTG+AGG 0.647683 1.3:-65852761 MS.gene005946:CDS
TCATAGATAGCTCAAATCTG+AGG 0.648141 1.3:+65855484 None:intergenic
CGAGGCCATAGATATCACAT+AGG 0.648602 1.3:+65851452 None:intergenic
GTATAGCTGAAACTCACCAT+AGG 0.648779 1.3:-65857411 MS.gene005946:intron
TAACCTACCATCACAGACCC+AGG 0.649354 1.3:+65850424 None:intergenic
TTATGTGTACCAGCAAAAGA+GGG 0.650285 1.3:+65854060 None:intergenic
GGTTGACTAGAGTTGTAAGA+GGG 0.652302 1.3:+65853533 None:intergenic
GTGTATTGCAGGGAACACTT+CGG 0.652546 1.3:-65849883 MS.gene005946:intron
TCTGTAAAAGCTCTACTGCA+AGG 0.652755 1.3:+65851314 None:intergenic
GAATTGGGAAGAGCATGTCC+TGG 0.653296 1.3:-65851265 MS.gene005946:CDS
TGCAAGAAGGAAGAACACAA+AGG 0.657542 1.3:-65849585 MS.gene005946:CDS
TTTAACCAGCTTGTGCAGGG+TGG 0.657609 1.3:-65856962 MS.gene005946:CDS
ACACTGTTCCATGGCCGTGG+AGG 0.658097 1.3:-65850499 MS.gene005946:CDS
CACGTCATTAAGAACCACAA+TGG 0.667175 1.3:-65850737 MS.gene005946:CDS
AAGAAACGAGCTCCTGACAG+CGG 0.670428 1.3:-65849291 MS.gene005946:CDS
TGAGTCCAAGCAAATACCCA+GGG 0.675293 1.3:+65849539 None:intergenic
AGAATAATAGGAGCTTGAGG+AGG 0.677598 1.3:-65849226 MS.gene005946:CDS
GAGCTCGGCTTCCTGAACAT+AGG 0.682691 1.3:-65849617 MS.gene005946:CDS
AGTTGTCTAACAGCTATCTG+TGG 0.683037 1.3:+65849818 None:intergenic
TGCAGGTGGAGATTCTGAAG+AGG 0.686065 1.3:-65849160 MS.gene005946:CDS
GTACCAGAGATTCATAACAG+AGG 0.693986 1.3:+65852671 None:intergenic
GGAGGCAGTATTGGTCGAGG+CGG 0.705601 1.3:-65850481 MS.gene005946:CDS
TGTGTTGTAAAGATCATCCG+GGG 0.722012 1.3:+65856934 None:intergenic
CCTACCATCACAGACCCAGG+TGG 0.773370 1.3:+65850427 None:intergenic
ATACCCAGGGAATAGCACGA+AGG 0.786673 1.3:+65849552 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.3 gene 65849070 65858008 65849070 ID=MS.gene005946
chr1.3 mRNA 65849070 65858008 65849070 ID=MS.gene005946.t1;Parent=MS.gene005946
chr1.3 exon 65857853 65858008 65857853 ID=MS.gene005946.t1.exon1;Parent=MS.gene005946.t1
chr1.3 CDS 65857853 65858008 65857853 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65857412 65857575 65857412 ID=MS.gene005946.t1.exon2;Parent=MS.gene005946.t1
chr1.3 CDS 65857412 65857575 65857412 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65856922 65857036 65856922 ID=MS.gene005946.t1.exon3;Parent=MS.gene005946.t1
chr1.3 CDS 65856922 65857036 65856922 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65856603 65856680 65856603 ID=MS.gene005946.t1.exon4;Parent=MS.gene005946.t1
chr1.3 CDS 65856603 65856680 65856603 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65856424 65856492 65856424 ID=MS.gene005946.t1.exon5;Parent=MS.gene005946.t1
chr1.3 CDS 65856424 65856492 65856424 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65856218 65856296 65856218 ID=MS.gene005946.t1.exon6;Parent=MS.gene005946.t1
chr1.3 CDS 65856218 65856296 65856218 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65856021 65856097 65856021 ID=MS.gene005946.t1.exon7;Parent=MS.gene005946.t1
chr1.3 CDS 65856021 65856097 65856021 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65855843 65855938 65855843 ID=MS.gene005946.t1.exon8;Parent=MS.gene005946.t1
chr1.3 CDS 65855843 65855938 65855843 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65855436 65855574 65855436 ID=MS.gene005946.t1.exon9;Parent=MS.gene005946.t1
chr1.3 CDS 65855436 65855574 65855436 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65854070 65854174 65854070 ID=MS.gene005946.t1.exon10;Parent=MS.gene005946.t1
chr1.3 CDS 65854070 65854174 65854070 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65853746 65853798 65853746 ID=MS.gene005946.t1.exon11;Parent=MS.gene005946.t1
chr1.3 CDS 65853746 65853798 65853746 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65853403 65853669 65853403 ID=MS.gene005946.t1.exon12;Parent=MS.gene005946.t1
chr1.3 CDS 65853403 65853669 65853403 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65852675 65852800 65852675 ID=MS.gene005946.t1.exon13;Parent=MS.gene005946.t1
chr1.3 CDS 65852675 65852800 65852675 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65852496 65852597 65852496 ID=MS.gene005946.t1.exon14;Parent=MS.gene005946.t1
chr1.3 CDS 65852496 65852597 65852496 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65852279 65852425 65852279 ID=MS.gene005946.t1.exon15;Parent=MS.gene005946.t1
chr1.3 CDS 65852279 65852425 65852279 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65851449 65851547 65851449 ID=MS.gene005946.t1.exon16;Parent=MS.gene005946.t1
chr1.3 CDS 65851449 65851547 65851449 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65851259 65851347 65851259 ID=MS.gene005946.t1.exon17;Parent=MS.gene005946.t1
chr1.3 CDS 65851259 65851347 65851259 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65850727 65850853 65850727 ID=MS.gene005946.t1.exon18;Parent=MS.gene005946.t1
chr1.3 CDS 65850727 65850853 65850727 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65850432 65850638 65850432 ID=MS.gene005946.t1.exon19;Parent=MS.gene005946.t1
chr1.3 CDS 65850432 65850638 65850432 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
chr1.3 exon 65849070 65849894 65849070 ID=MS.gene005946.t1.exon20;Parent=MS.gene005946.t1
chr1.3 CDS 65849070 65849894 65849070 ID=cds.MS.gene005946.t1;Parent=MS.gene005946.t1
Gene Sequence

>MS.gene005946

ATGACAGACACTACAGATGATATTGCTGAAGAAATCTCGTTCCAGAGCTTCGATGATGATTGTAGGTTACTTGGTAATCTTCTCAACGACATTCTTCACCGTGAAGTTGGTACCACCTTTGTTGACAAACTCGAAAGAATTCGTGTCCTTGCTCAAGTAACTAACTTTTTCTTAAAAACTCAAACTTTCCACTTTTTCTTCATACCCCACTTTTTTACTTTTCATGGGGTTTCATTGTTTTCAATATTCATTACTTTTATGTGATTTTTGCTCTGTTTCCATTTATGGGGTTTTGGCTTTTTCCCCTTGCTGAATGTGAAAATCTATGAAGCACTGATACAGACACCGGACACGTCTTTGATCAGAAGTGTCGGTGCTACAGAGGAGAAAATTGAGTAATAGTGAATGATGTTTCTATTTTTGTTTTTGGCAGAGTGCATGTAATATGAGGCAAGCAGGTATAGTGAACATGGCTGAGTTACTTGAGAAGCAGTTAGCTTCAGAGTTGTCAAAGATGTCATTAGAAGAAGCTTTCACTCTTGCTCGTGCTTTCAGTCATTATCTTACTATGATGGGTATAGCTGAAACTCACCATAGGTAAATAATCTACGGCTACACTAACTCTGATTATTTGTTGGTAATTAATAGTACTTTCCAAATTTCAGTTTTGGATTGGCTTATTCGAGCTTATCTAGTAACATAAGCACTTGTGTGACCGGTTATGAGAACTTATGAAAGTAAATTATGACATGTTCACCAGCTGTTTTTATTTTCGGCTTATTTTCATAAGCTCTCCAAGATAGCTCATTAAAAAAACTTGTAGCTTTATTTTGTCTTTTGTTATATAAAAATCTTATAGATAAGTGTATATCATGATAAGTCCTTATGCTATAAGCAGCTAATTAAGCTGTTTATCCAAACAGGGCCTACATAGGGTAATGGTAATCACTAACAGAAATTACGTGTTCACAGGGTTCGTAAAGGAGGGAATATGGCACAAATTTCAAAATCTTGTGATGATGTGTTTAACCAGCTTGTGCAGGGTGGAGTTTCCCCGGATGATCTTTACAACACAGTCTGCAAACAGGTCCATTTTTTGTTCTTTTCATGTCTATCTACATATGTATGGTAGAAAATGATCTTCCATTGCACGTCACTATAAAGCTTTTTCCTTGCATTTTTTTGGAAATTGTGAAATGCTATGTTTTGATTCTTTTCAATCCTTAATGTTTTTCTTGTTTATTTGGAATGGAATGTAATGTCTATACCGCTGGTGTTTCAATCAGTTAACCAGTTTGTTTTACATTTTTTTATTTTTGTTGCTTCAGGAGGTTGAGATTGTTCTTACAGCTCATCCCACACAAATTAATCGACGAACACTGCAATACAAACACATTCGGATTGCTGTGAGTATTTTACTTTGTTTGGCCATTCAAAAATTCAATGGAATGAAGTTTTCAAATTCAAAGATAGTATAAATATTTGTCTCTAACTACTTTGACTCTTCAACATGTAGCATCTTTTGGATTATAACGATCGACCTGATCTTAGCCCTGAAGATCGAGAAATGCTAATTGAGGATCTGGTATTACTTCTCTATTGTATTTTCACTCTAAAAAATCACTGTATTGTGAGAGGATGAGAATTTATCTGTTTAACTATTAAGTGGAAATATGTATGCCGTATTTTCATATGTCATCATGATTTGGTAGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAGCTTAGGCGCCAAAAACCCACTCCAGTTGATGAAGCTAGAGCTGGTAAGTTGCTTGAGTATCAAGTATTGTATATGTCAGGTCTTCTGGTTCACATTAAAAGAAAGTAATAATAATTTGGCGTGTAAGATTAAGAACTGTTCGTTTTATTTTTATTTCTCACAGGTTTGAATATAGTGGAGCAGTCACTCTGGAAAGCTGTTCCTCATTATTTACGACGTGTCAGCAATGCTTTAAAGAAGGTCTATCATCTTGAATTCTTGGTCAATTAGCTGTAATTTTTTTATAATTTTTTTTTTGTCATACAATCTATCCATTTTGCAGCATACTGGAAAGCCACTTCCACTGACTTGCACTCCCATAAAGTTTGGAACTTGGATGGGAGGTGATAGAGATGGAAATCCAAACGTTACCGCAAAGGTGAGCTTTTTTAACATCCATCCAAGTGCTCACTATCAGCGATTTTGCTTTTTATGAATACTAGTAACTGAGGGAAAGTGAGCTACCTATTGTTATGTCAATGTTTAAGTTATAATTTTCTTTCGTAGTTTTGTTATGGGGGTAGCAAGACATTCTTTTCTGTTTTATTTGTTTAGTTTTGTTGCCTGTACTTGAATAATATCATCAAATCTGCCAAATATTTTGTTCAACTTTGGGTTGAGTAAATGTTTTTCTGTTTGTTCCTCAGGTCACAAAAGCTGTTTCACTTCTATCTAGATGGATGGCTATTGACCTCTATATTCGGGAAGTGGATAGCCTCAGATTTGAGCTATCTATGAATCGGTGCAGTGATACGTTGTCAAGACTAGCACATGAAATTCTAGAAGGTTTGTCTGTTGAATTTTACTTTTGGCGAGATTCTTCCTAGTGCCAAGGGACTTAGCATTCACCTTTTGTCTTCTATCATGTGACTCCCAAATGCTGTTCGTTGAAAGTAACACAGATTCGTTATGCACATGAAGATTTGATAGCTTCAATATTAGTCCAATTCAATCTTGTTACTTCGATTTGTTAGATATCATATGAGCGACATTTTACCTCACATCTTTCTTCTAAAGTATTAGCACAAAAAATTGGAATTTAGAATGGAGAGGGATTCAACAACAACAACAACAACAACAACGCCTTATCCCACTAAGTGGGGTCGGCTACATGGATCAAATGCCGCCATAATGTTCTATCAAAGACCATATTTGGATCCAACTCATTGACCTCTAAATCTTTTCTAATGGTTTCTCTAATAGTTTTCTTAGGTCTTCCTCTACCTCTTTTAACCTGACTCTCCTCCATTTGATCTACTCTTCTTACCACGGCGTCTACGGGTCTTCTCTCTACATGTCCAAACCATCTAAGCCTATTTTCTACCAACTTTTCTACTATAGGTGCTACCCCCACTCTCTCTCTAATGATGTCATTCCTAATCCTATCATGTCTAGTCTTACCACTCATCCAACGCAACATCCTCATCTCCGCTACGCTTACTTTACTCTCGTGTTGGCTCTTAACCGCCCAACACTCCGTACCATACAACATTGCCGGTCTGACTGCTGTCCGATAGAACTTTCCTTTCAGCTTAAGTGGTACTTTCTTATCGCACAAAACACCTGAGGCTCTTCTCCATTTCAACCACCCAGCTTGAATACGATGATGTACATCAGCTTCTATTTCTCCGTCATTTTGTACTATGGACCCAAGATATCTAAACCGTGTAACTTGGGGTATGATATGATCTCCAACTTTCACCTCTAAGGTAGACCCACTTCTCCTTTTACTGAAGTTACATTCCATATATTCCGTCTTGTTTCTACTCAGGCGGAAACCGTACGCTTCTAAGGCTTGCCTCCAAGTCTCTAGCCTCCCGTTTAACTCCTCCCTCGACTCACCAAGCAAGACTATATCATCTGCAAAAAGCATACAGAATGGAGAGGGATTCATTTACATTTAATCTGTTATCACTTCTTGTCTAATTTGATGACATAAGATTGACTTCAACTGGCTTTGTGAATGTTTCCTTGGAGTATTTTCTAATTATGTTTGATGATCTTATTAGCCACTTCTAAGAGTTGATGGTCACTTCTTTCTTGACAGAAGCTAAAGACGAGAATCGCCATGAGAGTTGGAATCAGTCCACGAATAGAAGTCAGTCACTTCCAACACAGCTTCCAGCTAGAGCTCATTTACCCTCTTTTGCTGGTACACATAATACTTTTAATTATTTCTGTCTAGTTATTTGAGCATCAGCATACCATATCTCTTTGATTTAAATGTTTTTGTTTTCAAGAACCTCAGATATTTTTGACTTTCTGTTGTTCGTCCGACACTCAAATGATCTGTCGAATAATTCCCCTTTCTGATTGCACGAGAAATAATTATTAGGAATCACTACAATCCTTAATATAAATTCTATTTTGTCATGCACGAGGAATGATGAGGGGATTTTTAATTCATTATCTTTTTCATGTAGAAAATGGTGAATCGCAGCATCCTAGACTAGACATCCCAGGACCTGATCACAAGGTAGATCAATTCAGTGTTTGTGGCAGTTCTGAATTCTCCTAGCATGCTATATAATGTATATTTTCTTAATTAATAGGACGGTGGTATTTCTCCAAGTCCAACTACACTCAGAACTGGCAATCCCAGTCTTAAAGTATCAGTAACAAGTTCAGAAAATTCCAATGGTTCTTCATCTTCAATTCCATCTTCTCCCTCTTACAACTCTAGTCAACCGCTTTCTCAGAGGAAATTTACAGAATCCCAGACAGGAAAGTCCAGTTTTCAGAAGCTTTTAGAGCCACAGCTCCCTCAACTGGCTGGAATTGCTCCTTATAGAGTTGTCCTGGGAAATGTAAAGGATAAGGTATTGCTTCAGATTGATTCCGGTGATTAGTACTTAAAAAGTGACTGTTTTCAATGCTGTCATCGAATATCTGCTGTTTGCATGAGAGTAATAAATTATACTTGCATGTTATTGGTTTCTTGGCATTTTCGGCTGTACGCACTTGATAAGTTCCTTGCATTTCTACATCTTCCGTAAATGCTTCAAATGATTTGCAGTGAACACTAGTTTGAAAATAGATAGAATAACAGACTACATAATTTTCTGATTGAGACTGGATGCGAGACTATATATATCAAAAGTATTCACCAATAATCTACATCTATCCATCTTTTCAATTTAGCTATAAAAAAAGGGCAACCCGGTGCACTTAAAGCTCCCGCACACGCAGGGTCCGGGAAGGGGTCCCACCATTATTGGTGTATTGTACGCAGCCTTACCCTGTTTTTTACACAGGAGGCTGTTTTCAATTTAGCTATAGATGTACATATTATTACGTTAATTATATGCATTATCAGAATATCTACTGGATACAAAATCACATATTTTCTGTTTTAAGATAGCAGCTAGCAATTTGTAATTAAAATCACCATTATAATAAATGCATGCATTTTTTGTTTCAGCTTGAGAGAAGCCGTAGACGGTTAGAACTTCTTCTTGAGGATGTTGCATGTGACTATGATCCTTTGGATTATTATGAAACAGCTGACCAGCTTTTGGAACCTCTGCTCCTCTGTTATGAATCTCTGGTACTCTTTCCTTCCCTCTCTTTCATGAAAGGTTTGTTCACACTCCACAATTGCTATTTAACTCTCCATGTCTTCAGCAATCATGTGGGTCTGGGGTGCTAGCTGATGGTCGACTTGCTGATCTCATTCGTAGAGTTGCAACCTTTGGAATGGTTTTAATGAAGCTTGATTTACGCCAGGTACGATTTATATTTCATGTTTATCGTTGCTTGAGTAATCAATTATGACCTGAAACTAGCTGCATTACAGGAATCTGGGAGACATGCTGAGACACTTGATGCAGTTACAACATATTTGGATATGGGTACTTATAGTGAATGGGATGAAGAAAAGAAATTGGACTTCTTAACAAGAGAGCTGAAAGGAAAGAGGCCACTAGTTCCTGTTAGTATGGAGGTGAGACAGTTAAAGTTTTTAGTATACTAAGCAACTTTTTAATAAGCTGTTAGCTGTATATCTTGTGTTAGGAAAGCATACGAGTCTATTTTGAAAAGGAAAGAAGTTGACATCAATTCCATCTTTTAATGATAAATATGATAAATATGTCCAATTTTGATGTCATATGGAGAATCTATTTGCTGTGAAAATTGACGATGATAGACTGATTTGAGTGAACAAACATTGATAGACCATTTTGGTGTATTTATTATCAGAGAACCAAATTAATGAGACTTTCTTTTTGGAATTAGTTTACCAAAATGGATGTTTATTGTTTAAAGAAACCTTGATCTGCTGCATCATTCCAATCCTTTTTATATTTTTGCTTAGAATAGATGTATATTTATATCAACTTCTAATTATGCCACACATATCTAATTTTGATGTCCAGTTATATTGAAAAGCTAAAACTTGTTTCTGGAAATGCAGAGGAATTACTTTTGTTGCCTGAGTGAACGAATAAATTCTGTAGAGAATTTTTTATTTTTTTTTTAATTTTTTTTTATCTATTGTTGCTTATTCATTCCATTCACTTCTTAATAGTCTCATGATATTGAGACAACTGATTGCTAGATAAAAATTTATTGTACTTGTTTCACTCTCGGTGATCTAATGTAATCAGTAGCTCAACTACTTGTGATCATTTCAACGTTCGTGGCAATTTATGATTGGTATCTTGATTTTATTAGGTTCCTGCTGATGTTAAAGAAGTCTTGGATACATTCCGAATCGCTGCTGAACTAGGGAGTGATTTTCTAGGAGCCTATGTGATATCTATGGCCTCGAGTGTATGAATAATTGCCACCTTGAAATTATGACTACAATTTGTGCTATATCAATTGTTGTTCCATAGTCACACTAATAATATGGACTTTTGCTTGTTTATCAGGCAAGTGATGTCCTTGCAGTAGAGCTTTTACAGAAGGATGCACGGCTTGCTGCTATTGGAGAATTGGGAAGAGCATGTCCTGGTGGAACGTAAGTAGGAACCCTTTCTTTCAATTAGTCTGATCAAAATGATGCTTAAGATAAAAAAAAGTTGCTGATCAAAAAGTTACTTGCCCATAGGGCCTGTTTTGATAAATAGCTTATTTGCAGTTTATAGCACCAACACTTATTATGATAAGGGCTTATGTATAAGCTTGCATAGGCTATTTTTATATCAAAAGATAAAATAATGTTAAATTGTTTTTGTATATGCTATAAGTTGTTTTATAAGTTATATTGGAGAACTTATGAAAACAAGTTAAAAACAGCTTATGAAAATTGTCATAAGCTGTTTTAATTTTTTTTATTATCAAACAGTCCCACAAAATAAGCCAATCCAAACAGGCCCTATATCTGTATTGTGAAAATTTGAATCTTATGACATGTTTACATTAGGTTGCGGGTTGTCCCTCTATTTGAAACCGTGAAGGACCTAAGAGGTGCTGGTTCAGTTATCCGGAAACTTTTATCAATAGACTGGTACCGCGAGCACGTCATTAAGAACCACAATGGACATCAAGAGGTGCTTTTTTGATCCGAGATTCATTTAATTTTATGTTATGGCTATCATGTGAAATTCATGTTATAGTATTATGAATTTGTATATGCAGGTTATGGTTGGATATTCTGATTCTGGTAAAGATGCTGGCCGCTTCACTGCTGCTTGGGAACTTTACAAAGCTCAGGAGGATGTTGTAGCTGCTTGCAATGATTATGGTATTAAAGTTACACTGTTCCATGGCCGTGGAGGCAGTATTGGTCGAGGCGGTGGCCCTACATATCTGGCTATTCAGTCCCAACCACCTGGGTCTGTGATGGTAGGTTATGCATTTAACTTTATTGTTGCCAATTTTTTTTTTCAAAAAAAAAAAAAAATAACCTGCTTGAAACTTAATGGTATGAGGCGATGGTGGCTGTAATTTTTTTGGTACATCAATGGTATGGTATGTATCCAGCATCCCACATGAGAGGTTGGTGTGTTAATGGTTTCAACTTCTAGGACTTGATTCCTTGGATCGTAAATAAGTGACAAACATTTGGAATATTGGACTGATAGAGTAATGATACATGTTTACGTTGTTTGACTTTGATTTGTTTAACCATGAAACTGTTTTGGTTGAATTTTGGAGAACATTCAATAATCTTAAGAACTTTTAGGCTAGTATATCATCTAAGCTTTGTTATTTAGTATTATTTACCTGATAGTCAAATTAAATCCTCAACTATGAATTTGATTTTAGATCATGCTATGAGTCTTATGACCAGTCTTAAGGAACAAGTTTTACCGCTGACAGCTCCGTTTCTGAATAAAACATTTGAAAGCAAAAATTTATGTTTCCCACGGTGTATTGCAGGGAACACTTCGGTCTACCGAGCAGGGAGAAATGGTAGAGGCGAAGTTTGGGTTGCCACAGATAGCTGTTAGACAACTTGAAATATACACAACTGCTGTATTACTTGCAACCCTTCGTCCACCTCTCCCACCCCGAGATGAAAATTGGCGTAGTCTCATGGAAGAAATCTCAGATATCAGCTGCAAGTGTTACCGCAATGTAGTCTACGAAAATCCAGAGTTCCTTTCTTACTTCCACGAAGCCACGCCTGAAGCAGAGCTCGGCTTCCTGAACATAGGTAGTCGCCCTGCAAGAAGGAAGAACACAAAGGGAATTGGAAACCTTCGTGCTATTCCCTGGGTATTTGCTTGGACTCAAACCAGATTTGTTCTTCCAGCTTGGCTCGGAGTTGGAGCAGGTTTGAAAGGTGCTTGTGAGAAAGGTCATAGCGAAGAACTAAAAGCAATGTACAAAGAATGGCCTTTCTTTCAAAGTACAATAGACCTTATTGAGATGGTGTTAGGGAAAGCAGACACTACTATAGCCAAGTACTATGATGAAGCCCTTGTGTCAGAGGAGAGGCAAGAACTCGGACGTGAGCTAAGAAACGAGCTCCTGACAGCGGAAAAGTTTGTGCTCGTGATTAGTGGGCATGAGAAACTTCAGCAGAATAATAGGAGCTTGAGGAGGTTGGTTGAGAATAGACTTCCATTTCTCAATCCCATGAACCTGTTGCAGGTGGAGATTCTGAAGAGGTTGAGGCGTGACGACGACAACCTTAAACTCAGAGATGCTTTGCTTATCACCGTAAATGGGATTGCTGCTGGGATGAGGAATACCGGTTAA
Protein sequence

>MS.gene005946.t1

MTDTTDDIAEEISFQSFDDDCRLLGNLLNDILHREVGTTFVDKLERIRVLAQSACNMRQAGIVNMAELLEKQLASELSKMSLEEAFTLARAFSHYLTMMGIAETHHRVRKGGNMAQISKSCDDVFNQLVQGGVSPDDLYNTVCKQEVEIVLTAHPTQINRRTLQYKHIRIAHLLDYNDRPDLSPEDREMLIEDLVREITSIWQTDELRRQKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSNALKKHTGKPLPLTCTPIKFGTWMGGDRDGNPNVTAKVTKAVSLLSRWMAIDLYIREVDSLRFELSMNRCSDTLSRLAHEILEEAKDENRHESWNQSTNRSQSLPTQLPARAHLPSFAENGESQHPRLDIPGPDHKDGGISPSPTTLRTGNPSLKVSVTSSENSNGSSSSIPSSPSYNSSQPLSQRKFTESQTGKSSFQKLLEPQLPQLAGIAPYRVVLGNVKDKLERSRRRLELLLEDVACDYDPLDYYETADQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAETLDAVTTYLDMGTYSEWDEEKKLDFLTRELKGKRPLVPVSMEVPADVKEVLDTFRIAAELGSDFLGAYVISMASSASDVLAVELLQKDARLAAIGELGRACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYREHVIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNDYGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVEAKFGLPQIAVRQLEIYTTAVLLATLRPPLPPRDENWRSLMEEISDISCKCYRNVVYENPEFLSYFHEATPEAELGFLNIGSRPARRKNTKGIGNLRAIPWVFAWTQTRFVLPAWLGVGAGLKGACEKGHSEELKAMYKEWPFFQSTIDLIEMVLGKADTTIAKYYDEALVSEERQELGRELRNELLTAEKFVLVISGHEKLQQNNRSLRRLVENRLPFLNPMNLLQVEILKRLRRDDDNLKLRDALLITVNGIAAGMRNTG