Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006136.t1 | XP_003592069.1 | 99.1 | 422 | 4 | 0 | 1 | 422 | 1 | 422 | 1.50E-240 | 841.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006136.t1 | Q9SB58 | 66.7 | 423 | 117 | 8 | 4 | 421 | 3 | 406 | 1.8e-157 | 557.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006136.t1 | G7IBW6 | 99.1 | 422 | 4 | 0 | 1 | 422 | 1 | 422 | 1.1e-240 | 841.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33918 | MS.gene006136 | PPI |
| MS.gene60766 | MS.gene006136 | PPI |
| MS.gene006136 | MS.gene88846 | PPI |
| MS.gene006074 | MS.gene006136 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006136.t1 | MTR_1g098390 | 99.052 | 422 | 4 | 0 | 1 | 422 | 1 | 422 | 0.0 | 869 |
| MS.gene006136.t1 | MTR_6g038020 | 80.440 | 409 | 74 | 4 | 15 | 419 | 16 | 422 | 0.0 | 667 |
| MS.gene006136.t1 | MTR_6g038020 | 80.244 | 410 | 75 | 4 | 14 | 419 | 12 | 419 | 0.0 | 667 |
| MS.gene006136.t1 | MTR_6g033315 | 54.478 | 402 | 172 | 7 | 6 | 404 | 21 | 414 | 1.63e-149 | 431 |
| MS.gene006136.t1 | MTR_7g083480 | 55.774 | 407 | 157 | 8 | 5 | 404 | 20 | 410 | 2.09e-141 | 410 |
| MS.gene006136.t1 | MTR_3g098840 | 48.387 | 403 | 178 | 6 | 5 | 403 | 21 | 397 | 5.47e-129 | 379 |
| MS.gene006136.t1 | MTR_7g088350 | 50.440 | 341 | 150 | 5 | 1 | 334 | 21 | 349 | 4.61e-116 | 347 |
| MS.gene006136.t1 | MTR_7g088360 | 53.443 | 305 | 131 | 4 | 1 | 301 | 25 | 322 | 7.11e-112 | 335 |
| MS.gene006136.t1 | MTR_4g023760 | 27.703 | 296 | 182 | 11 | 30 | 317 | 24 | 295 | 1.97e-25 | 105 |
| MS.gene006136.t1 | MTR_4g021795 | 31.000 | 200 | 110 | 7 | 67 | 261 | 52 | 228 | 1.62e-20 | 91.7 |
| MS.gene006136.t1 | MTR_7g114080 | 35.507 | 138 | 79 | 2 | 136 | 263 | 160 | 297 | 5.59e-19 | 88.6 |
| MS.gene006136.t1 | MTR_7g114080 | 33.333 | 147 | 79 | 2 | 136 | 263 | 160 | 306 | 9.54e-18 | 84.7 |
| MS.gene006136.t1 | MTR_4g116160 | 29.936 | 157 | 92 | 4 | 31 | 185 | 285 | 425 | 1.41e-17 | 85.5 |
| MS.gene006136.t1 | MTR_1g094610 | 32.778 | 180 | 82 | 5 | 88 | 261 | 69 | 215 | 1.45e-17 | 82.8 |
| MS.gene006136.t1 | MTR_5g023230 | 34.225 | 187 | 100 | 6 | 133 | 309 | 145 | 318 | 1.64e-17 | 83.6 |
| MS.gene006136.t1 | MTR_4g116160 | 29.936 | 157 | 92 | 4 | 31 | 185 | 112 | 252 | 1.81e-17 | 84.7 |
| MS.gene006136.t1 | MTR_5g023230 | 34.225 | 187 | 100 | 6 | 133 | 309 | 165 | 338 | 2.06e-17 | 83.6 |
| MS.gene006136.t1 | MTR_4g116160 | 29.936 | 157 | 92 | 4 | 31 | 185 | 285 | 425 | 3.16e-17 | 84.0 |
| MS.gene006136.t1 | MTR_4g092760 | 34.426 | 122 | 69 | 2 | 69 | 190 | 307 | 417 | 1.77e-16 | 81.6 |
| MS.gene006136.t1 | MTR_7g114080 | 33.562 | 146 | 70 | 3 | 136 | 258 | 160 | 301 | 5.39e-16 | 79.0 |
| MS.gene006136.t1 | MTR_1g112830 | 30.455 | 220 | 113 | 8 | 70 | 278 | 415 | 605 | 1.13e-15 | 79.7 |
| MS.gene006136.t1 | MTR_7g118050 | 29.661 | 236 | 117 | 11 | 88 | 303 | 83 | 289 | 1.48e-15 | 77.4 |
| MS.gene006136.t1 | MTR_4g092760 | 34.821 | 112 | 62 | 2 | 79 | 190 | 228 | 328 | 1.90e-15 | 78.2 |
| MS.gene006136.t1 | MTR_7g114080 | 54.237 | 59 | 27 | 0 | 136 | 194 | 160 | 218 | 9.22e-15 | 75.1 |
| MS.gene006136.t1 | MTR_7g118050 | 35.294 | 102 | 40 | 2 | 88 | 179 | 83 | 168 | 4.42e-14 | 71.6 |
| MS.gene006136.t1 | MTR_5g023230 | 41.270 | 63 | 37 | 0 | 133 | 195 | 165 | 227 | 1.56e-12 | 67.4 |
| MS.gene006136.t1 | MTR_1g085980 | 30.075 | 133 | 84 | 3 | 135 | 258 | 155 | 287 | 4.90e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006136.t1 | AT4G24630 | 66.509 | 424 | 118 | 8 | 3 | 421 | 2 | 406 | 0.0 | 577 |
| MS.gene006136.t1 | AT5G50020 | 62.353 | 425 | 146 | 5 | 1 | 421 | 30 | 444 | 0.0 | 535 |
| MS.gene006136.t1 | AT5G50020 | 62.648 | 423 | 144 | 5 | 3 | 421 | 2 | 414 | 0.0 | 534 |
| MS.gene006136.t1 | AT5G50020 | 61.229 | 423 | 143 | 6 | 3 | 421 | 2 | 407 | 0.0 | 514 |
| MS.gene006136.t1 | AT3G26935 | 54.300 | 407 | 169 | 8 | 5 | 404 | 19 | 415 | 7.56e-146 | 422 |
| MS.gene006136.t1 | AT5G41060 | 51.485 | 404 | 178 | 7 | 5 | 406 | 19 | 406 | 1.33e-135 | 395 |
| MS.gene006136.t1 | AT3G48760 | 48.905 | 411 | 184 | 7 | 5 | 402 | 28 | 425 | 4.60e-129 | 381 |
| MS.gene006136.t1 | AT5G41060 | 50.636 | 393 | 176 | 7 | 16 | 406 | 15 | 391 | 2.60e-128 | 376 |
| MS.gene006136.t1 | AT3G56930 | 51.775 | 338 | 142 | 6 | 4 | 323 | 9 | 343 | 1.50e-115 | 346 |
| MS.gene006136.t1 | AT5G41060 | 50.291 | 344 | 154 | 6 | 63 | 404 | 9 | 337 | 6.36e-111 | 330 |
| MS.gene006136.t1 | AT5G41060 | 50.291 | 344 | 154 | 6 | 63 | 404 | 9 | 337 | 6.36e-111 | 330 |
| MS.gene006136.t1 | AT5G05070 | 43.782 | 386 | 187 | 7 | 5 | 385 | 37 | 397 | 2.33e-104 | 315 |
| MS.gene006136.t1 | AT2G40990 | 47.305 | 334 | 164 | 5 | 4 | 334 | 27 | 351 | 1.82e-100 | 305 |
| MS.gene006136.t1 | AT3G56920 | 51.163 | 301 | 137 | 4 | 4 | 301 | 9 | 302 | 1.10e-98 | 298 |
| MS.gene006136.t1 | AT3G56930 | 48.525 | 305 | 111 | 4 | 4 | 301 | 9 | 274 | 1.78e-95 | 293 |
| MS.gene006136.t1 | AT3G60800 | 27.881 | 269 | 157 | 9 | 30 | 283 | 24 | 270 | 8.48e-20 | 89.7 |
| MS.gene006136.t1 | AT3G09320 | 31.429 | 175 | 93 | 5 | 87 | 258 | 66 | 216 | 4.66e-19 | 87.4 |
| MS.gene006136.t1 | AT3G04970 | 30.942 | 223 | 105 | 7 | 60 | 263 | 27 | 219 | 6.24e-19 | 87.4 |
| MS.gene006136.t1 | AT3G04970 | 33.987 | 153 | 82 | 2 | 136 | 269 | 160 | 312 | 6.06e-18 | 85.5 |
| MS.gene006136.t1 | AT3G51390 | 35.079 | 191 | 99 | 5 | 130 | 309 | 156 | 332 | 2.62e-17 | 83.2 |
| MS.gene006136.t1 | AT3G51390 | 35.079 | 191 | 99 | 5 | 130 | 309 | 151 | 327 | 2.92e-17 | 82.8 |
| MS.gene006136.t1 | AT4G00840 | 28.464 | 267 | 150 | 9 | 31 | 283 | 16 | 255 | 4.74e-17 | 81.6 |
| MS.gene006136.t1 | AT5G04270 | 29.101 | 189 | 99 | 5 | 73 | 260 | 57 | 211 | 8.52e-17 | 80.5 |
| MS.gene006136.t1 | AT2G14255 | 23.643 | 258 | 172 | 6 | 31 | 278 | 273 | 515 | 9.63e-16 | 79.7 |
| MS.gene006136.t1 | AT3G04970 | 34.507 | 142 | 74 | 2 | 136 | 258 | 160 | 301 | 1.63e-15 | 77.4 |
| MS.gene006136.t1 | AT4G00840 | 30.380 | 158 | 82 | 4 | 31 | 179 | 16 | 154 | 2.51e-15 | 75.1 |
| MS.gene006136.t1 | AT5G20350 | 26.515 | 264 | 144 | 11 | 65 | 305 | 311 | 547 | 3.10e-15 | 78.2 |
| MS.gene006136.t1 | AT4G22750 | 28.992 | 238 | 126 | 12 | 65 | 286 | 53 | 263 | 1.71e-14 | 74.3 |
| MS.gene006136.t1 | AT1G69420 | 32.824 | 131 | 79 | 2 | 137 | 258 | 164 | 294 | 8.18e-14 | 73.9 |
| MS.gene006136.t1 | AT1G69420 | 32.824 | 131 | 79 | 2 | 137 | 258 | 164 | 294 | 8.18e-14 | 73.9 |
| MS.gene006136.t1 | AT4G15080 | 28.244 | 131 | 85 | 3 | 137 | 258 | 175 | 305 | 4.20e-11 | 65.5 |
| MS.gene006136.t1 | AT4G15080 | 28.244 | 131 | 85 | 3 | 137 | 258 | 175 | 305 | 4.20e-11 | 65.5 |
| MS.gene006136.t1 | AT4G01730 | 27.820 | 133 | 87 | 1 | 135 | 258 | 157 | 289 | 9.14e-11 | 63.9 |
Find 102 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCGGGTTCAGCTGTATTA+TGG | 0.185783 | 1.4:-76352034 | None:intergenic |
| AGCCCTCAAGGAACAATTTC+AGG | 0.201284 | 1.4:+76351811 | MS.gene006136:CDS |
| TTGGGAGGGAGGTTGGTATT+TGG | 0.234568 | 1.4:+76350092 | MS.gene006136:CDS |
| TGACCTGGTTTGTGCTTATA+AGG | 0.264898 | 1.4:-76351354 | None:intergenic |
| TGGTTTGTTGGTGGACTAAC+TGG | 0.265761 | 1.4:+76351319 | MS.gene006136:CDS |
| TCACAATATTTCACCTTTAC+AGG | 0.267079 | 1.4:-76350894 | None:intergenic |
| CTGATGGATAATAATGATAT+TGG | 0.268744 | 1.4:+76351226 | MS.gene006136:CDS |
| CTTCTTCATGTTTGTTTCTT+CGG | 0.274672 | 1.4:+76351150 | MS.gene006136:CDS |
| CATTACTTCCTTTCCAAACT+TGG | 0.299890 | 1.4:-76348534 | None:intergenic |
| TTCATCTCTCTGTGGTTTGT+TGG | 0.342371 | 1.4:+76351307 | MS.gene006136:CDS |
| GGACGTGAACCAGATGATTT+AGG | 0.344379 | 1.4:+76351885 | MS.gene006136:CDS |
| AATACACAAAAGATGATAAC+TGG | 0.357912 | 1.4:-76350161 | None:intergenic |
| CAAAGCGCGTGTACCAAGTT+TGG | 0.358764 | 1.4:+76348521 | MS.gene006136:CDS |
| CGCTGACTACAGTCATTTCC+CGG | 0.363776 | 1.4:+76351862 | MS.gene006136:CDS |
| ATCGGGTTCAGCTGTATTAT+GGG | 0.367393 | 1.4:-76352033 | None:intergenic |
| TGAGACATAGTTTCTGCTTT+CGG | 0.370907 | 1.4:-76352174 | None:intergenic |
| TCATAACGAAACTCTTCTTC+TGG | 0.372940 | 1.4:-76350795 | None:intergenic |
| GCCCTGAAATTGTTCCTTGA+GGG | 0.375186 | 1.4:-76351813 | None:intergenic |
| TTCAACACAGTTGTTGCATA+TGG | 0.381975 | 1.4:-76350958 | None:intergenic |
| GTTGGGAAAGAAGTGGAAAC+TGG | 0.383128 | 1.4:+76352114 | MS.gene006136:CDS |
| GCTTTCGGTGACATTTGAAT+TGG | 0.392459 | 1.4:-76352159 | None:intergenic |
| ATCTGATGACAAAATTGAAT+CGG | 0.397612 | 1.4:-76352051 | None:intergenic |
| ATCTCTCTGTGGTTTGTTGG+TGG | 0.400037 | 1.4:+76351310 | MS.gene006136:CDS |
| TGGTATTTGGACCTGATGCC+AGG | 0.402430 | 1.4:+76350105 | MS.gene006136:CDS |
| GCCATTAAAATCACAGATGC+AGG | 0.405346 | 1.4:-76351277 | None:intergenic |
| AATCATCTGGTTCACGTCCC+CGG | 0.425156 | 1.4:-76351881 | None:intergenic |
| GTTTCGATCACCATTGCCCT+TGG | 0.426437 | 1.4:+76350982 | MS.gene006136:CDS |
| AAGGCTTGGTGTTTGTTGTC+CGG | 0.437240 | 1.4:-76350832 | None:intergenic |
| TGATGGATAATAATGATATT+GGG | 0.439446 | 1.4:+76351227 | MS.gene006136:CDS |
| ATTCATATTGGGAGGGAGGT+TGG | 0.442239 | 1.4:+76350085 | MS.gene006136:CDS |
| TGATGCTAGGCACTCGAGTT+GGG | 0.442268 | 1.4:+76352097 | MS.gene006136:CDS |
| TATTTGTAGCAAGGCATCTT+CGG | 0.448925 | 1.4:+76350180 | MS.gene006136:CDS |
| CGATCACCATTGCCCTTGGG+TGG | 0.452546 | 1.4:+76350986 | MS.gene006136:CDS |
| ACGAGGACATTCAGAATAGA+AGG | 0.454776 | 1.4:+76351997 | MS.gene006136:CDS |
| CGATCTCCACCTAAATCATC+TGG | 0.458038 | 1.4:-76351894 | None:intergenic |
| TTTACTTCTGCACGTGATCC+GGG | 0.459773 | 1.4:+76350747 | MS.gene006136:CDS |
| GTTGAAGATGATCTAGATAT+CGG | 0.459943 | 1.4:+76351927 | MS.gene006136:CDS |
| ATAAGCAGGGACCTGGCATC+AGG | 0.465465 | 1.4:-76350116 | None:intergenic |
| GCCCTCAAGGAACAATTTCA+GGG | 0.468192 | 1.4:+76351812 | MS.gene006136:CDS |
| TCTAGATCATCTTCAACCTT+AGG | 0.476598 | 1.4:-76351921 | None:intergenic |
| TTTCGATCACCATTGCCCTT+GGG | 0.476678 | 1.4:+76350983 | MS.gene006136:CDS |
| ATCATCTGGTTCACGTCCCC+GGG | 0.476849 | 1.4:-76351880 | None:intergenic |
| TCTGGTGGATGTGAATTCCT+AGG | 0.488071 | 1.4:-76350777 | None:intergenic |
| TCAACAACAGAGTGATAAGC+AGG | 0.501511 | 1.4:-76350130 | None:intergenic |
| GGTCAATGGCCTTCCTGTAA+AGG | 0.502557 | 1.4:+76350881 | MS.gene006136:CDS |
| GTGATCCGGGTATCATTCCT+AGG | 0.507664 | 1.4:+76350760 | MS.gene006136:CDS |
| CCTTGGGTGGGCCAATGCAT+CGG | 0.507687 | 1.4:+76350999 | MS.gene006136:CDS |
| CTGATGCTAGGCACTCGAGT+TGG | 0.513944 | 1.4:+76352096 | MS.gene006136:CDS |
| ATCGTACCAGACCGATGCAT+TGG | 0.515932 | 1.4:-76351010 | None:intergenic |
| AGGTGGAGATCGCCGTCCTA+AGG | 0.518925 | 1.4:+76351905 | MS.gene006136:CDS |
| GGTGGGCCAATGCATCGGTC+TGG | 0.526093 | 1.4:+76351004 | MS.gene006136:CDS |
| TCTGATGACAAAATTGAATC+GGG | 0.527605 | 1.4:-76352050 | None:intergenic |
| ACAAAAGAAGTAATGGTCAA+TGG | 0.531295 | 1.4:+76350867 | MS.gene006136:CDS |
| GATCACCATTGCCCTTGGGT+GGG | 0.532792 | 1.4:+76350987 | MS.gene006136:CDS |
| GCTGACTACAGTCATTTCCC+GGG | 0.535809 | 1.4:+76351863 | MS.gene006136:CDS |
| TCCGATACAGAGCTGATGGC+CGG | 0.537522 | 1.4:+76351727 | MS.gene006136:CDS |
| TGATATTGGGACGGTGTGGA+AGG | 0.541635 | 1.4:+76351240 | MS.gene006136:CDS |
| GTTCGTGGGAACTGAAGGCT+TGG | 0.542418 | 1.4:-76350846 | None:intergenic |
| CCCACGAACAAAAGAAGTAA+TGG | 0.547877 | 1.4:+76350860 | MS.gene006136:CDS |
| CCGATGCATTGGCCCACCCA+AGG | 0.548990 | 1.4:-76350999 | None:intergenic |
| CTTGATGTAAAATGCTGAGA+AGG | 0.551418 | 1.4:-76351200 | None:intergenic |
| TGCAGAAATTCATATTGGGA+GGG | 0.554399 | 1.4:+76350078 | MS.gene006136:intron |
| TCCGGCCATCAGCTCTGTAT+CGG | 0.557777 | 1.4:-76351728 | None:intergenic |
| TAACGAAACTCTTCTTCTGG+TGG | 0.560200 | 1.4:-76350792 | None:intergenic |
| CTTATTGTTTCATCTCTCTG+TGG | 0.560672 | 1.4:+76351299 | MS.gene006136:CDS |
| TTGCAGAAATTCATATTGGG+AGG | 0.560897 | 1.4:+76350077 | MS.gene006136:intron |
| TATGAATCTTCTACAGTAGC+CGG | 0.561324 | 1.4:+76350813 | MS.gene006136:CDS |
| AACTTCCGATACAGAGCTGA+TGG | 0.564513 | 1.4:+76351723 | MS.gene006136:CDS |
| CAGAAACTATGTCTCATCAA+AGG | 0.566125 | 1.4:+76352181 | MS.gene006136:CDS |
| CGATGCATTGGCCCACCCAA+GGG | 0.571945 | 1.4:-76350998 | None:intergenic |
| CCATTAAAATCACAGATGCA+GGG | 0.572375 | 1.4:-76351276 | None:intergenic |
| ATTGGCCCACCCAAGGGCAA+TGG | 0.573287 | 1.4:-76350992 | None:intergenic |
| CCACAATACGATCTGATGCT+AGG | 0.575400 | 1.4:+76352084 | MS.gene006136:CDS |
| AATATTTCACCTTTACAGGA+AGG | 0.578975 | 1.4:-76350890 | None:intergenic |
| GCACAGAAATAAAGCCCTCA+AGG | 0.581420 | 1.4:+76351799 | MS.gene006136:CDS |
| CAGAGTGATAAGCAGGGACC+TGG | 0.584523 | 1.4:-76350123 | None:intergenic |
| AGCAATGCGAGCAACGAGGA+GGG | 0.589494 | 1.4:-76350935 | None:intergenic |
| AGAAATTCATATTGGGAGGG+AGG | 0.591649 | 1.4:+76350081 | MS.gene006136:intron |
| CGCGTGTACCAAGTTTGGAA+AGG | 0.595301 | 1.4:+76348526 | MS.gene006136:CDS |
| TATTGAAGATATCACAGCGT+AGG | 0.599952 | 1.4:+76351958 | MS.gene006136:CDS |
| AAACAAACATGAAGAAGTAA+CGG | 0.600646 | 1.4:-76351144 | None:intergenic |
| AGCCCTGAAATTGTTCCTTG+AGG | 0.605131 | 1.4:-76351814 | None:intergenic |
| TTGGGAAAGAAGTGGAAACT+GGG | 0.614418 | 1.4:+76352115 | MS.gene006136:CDS |
| CACTCGAGTTGGGAAAGAAG+TGG | 0.619470 | 1.4:+76352107 | MS.gene006136:CDS |
| CCTAGCATCAGATCGTATTG+TGG | 0.626014 | 1.4:-76352084 | None:intergenic |
| AAGTAAAACAGAGAAGCACC+AGG | 0.628755 | 1.4:-76350731 | None:intergenic |
| TCGGGTTCAGCTGTATTATG+GGG | 0.630608 | 1.4:-76352032 | None:intergenic |
| ATTCAGAATAGAAGGAGCAA+TGG | 0.632276 | 1.4:+76352005 | MS.gene006136:CDS |
| CGTGAACCAGATGATTTAGG+TGG | 0.634926 | 1.4:+76351888 | MS.gene006136:CDS |
| GAGCAATGCGAGCAACGAGG+AGG | 0.635551 | 1.4:-76350936 | None:intergenic |
| CATTAAAATCACAGATGCAG+GGG | 0.637602 | 1.4:-76351275 | None:intergenic |
| TTGTTCAAGAGGAGGTACAA+AGG | 0.639298 | 1.4:+76351838 | MS.gene006136:CDS |
| GATCATCTTCAACCTTAGGA+CGG | 0.645908 | 1.4:-76351917 | None:intergenic |
| GTACCTTATAAGCACAAACC+AGG | 0.647591 | 1.4:+76351351 | MS.gene006136:CDS |
| CAACAACAGAGTGATAAGCA+GGG | 0.663934 | 1.4:-76350129 | None:intergenic |
| ATAATGATATTGGGACGGTG+TGG | 0.667624 | 1.4:+76351236 | MS.gene006136:CDS |
| GGATAATAATGATATTGGGA+CGG | 0.677213 | 1.4:+76351231 | MS.gene006136:CDS |
| CGGGAAATGACTGTAGTCAG+CGG | 0.680419 | 1.4:-76351861 | None:intergenic |
| GAATATTGAGCAACTCGACG+AGG | 0.690893 | 1.4:+76351980 | MS.gene006136:CDS |
| GAATTCCTAGGAATGATACC+CGG | 0.707357 | 1.4:-76350765 | None:intergenic |
| CTGACTACAGTCATTTCCCG+GGG | 0.712910 | 1.4:+76351864 | MS.gene006136:CDS |
| ATGGAGCAATGCGAGCAACG+AGG | 0.766529 | 1.4:-76350939 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATATTTAGTTAGTGT+TGG | - | chr1.4:76349520-76349539 | None:intergenic | 15.0% |
| !! | ATTTATATTTAGTTAGTGTT+GGG | - | chr1.4:76349519-76349538 | None:intergenic | 15.0% |
| !! | ATTTATTGTATCTCATTTAT+TGG | + | chr1.4:76351412-76351431 | MS.gene006136:intron | 15.0% |
| !! | TTGATATTGATACTATATAT+AGG | + | chr1.4:76349782-76349801 | MS.gene006136:intron | 15.0% |
| !! | TTGTGAGTAAAATATTAAAT+TGG | + | chr1.4:76349547-76349566 | MS.gene006136:intron | 15.0% |
| !! | TTTATTGTATCTCATTTATT+GGG | + | chr1.4:76351413-76351432 | MS.gene006136:intron | 15.0% |
| !!! | CTTTTGTTCTAATTTTTTTT+GGG | + | chr1.4:76351097-76351116 | MS.gene006136:intron | 15.0% |
| !!! | TATTTCTAATTAATACACTT+TGG | - | chr1.4:76351509-76351528 | None:intergenic | 15.0% |
| !!! | TCAGTATATTTGTTATTATT+GGG | + | chr1.4:76349045-76349064 | MS.gene006136:intron | 15.0% |
| !!! | TCTTTATATATTTTTCAGAT+TGG | + | chr1.4:76349901-76349920 | MS.gene006136:intron | 15.0% |
| !! | ACTTATTTAAATTGAGACTA+TGG | - | chr1.4:76350356-76350375 | None:intergenic | 20.0% |
| !! | ATTAAATTGGTTGGATTAAA+TGG | + | chr1.4:76349560-76349579 | MS.gene006136:intron | 20.0% |
| !! | ATTTAGTTAATCATATGTGT+CGG | - | chr1.4:76350487-76350506 | None:intergenic | 20.0% |
| !! | CAATAATAACAAATATACTG+AGG | - | chr1.4:76349046-76349065 | None:intergenic | 20.0% |
| !! | GAGTAAAATATTAAATTGGT+TGG | + | chr1.4:76349551-76349570 | MS.gene006136:intron | 20.0% |
| !! | TAAAAATAGAAGAAAGAATG+AGG | - | chr1.4:76348577-76348596 | None:intergenic | 20.0% |
| !! | TAGTAAAATCAAACAGTATT+AGG | - | chr1.4:76350597-76350616 | None:intergenic | 20.0% |
| !! | TCTTCTTTGAATTATTAGTT+AGG | + | chr1.4:76348737-76348756 | MS.gene006136:intron | 20.0% |
| !! | TTATTGTATCTCATTTATTG+GGG | + | chr1.4:76351414-76351433 | MS.gene006136:intron | 20.0% |
| !! | TTTATATTTAGTTAGTGTTG+GGG | - | chr1.4:76349518-76349537 | None:intergenic | 20.0% |
| !!! | AGGTTGTTTAAATAATTTTC+TGG | + | chr1.4:76351767-76351786 | MS.gene006136:CDS | 20.0% |
| !!! | ATACTGTTTGATTTTACTAA+AGG | + | chr1.4:76350598-76350617 | MS.gene006136:intron | 20.0% |
| !!! | CAGTATATTTGTTATTATTG+GGG | + | chr1.4:76349046-76349065 | MS.gene006136:intron | 20.0% |
| !!! | CTCAGTATATTTGTTATTAT+TGG | + | chr1.4:76349044-76349063 | MS.gene006136:intron | 20.0% |
| !!! | GCTTTTGTTCTAATTTTTTT+TGG | + | chr1.4:76351096-76351115 | MS.gene006136:intron | 20.0% |
| !!! | GTGTTTTTTTTGTTTGTTTT+GGG | + | chr1.4:76348799-76348818 | MS.gene006136:intron | 20.0% |
| !!! | TCATTTTCTCAAATTATTAC+CGG | + | chr1.4:76350511-76350530 | MS.gene006136:intron | 20.0% |
| !!! | TGATGGATAATAATGATATT+GGG | + | chr1.4:76351227-76351246 | MS.gene006136:CDS | 20.0% |
| !!! | TGTGTTTTTTTTGTTTGTTT+TGG | + | chr1.4:76348798-76348817 | MS.gene006136:intron | 20.0% |
| !!! | TTTTAGCTCATTTTTCATTT+GGG | + | chr1.4:76348592-76348611 | MS.gene006136:intron | 20.0% |
| !!! | TTTTTAGCTCATTTTTCATT+TGG | + | chr1.4:76348591-76348610 | MS.gene006136:intron | 20.0% |
| ! | AAACAAACATGAAGAAGTAA+CGG | - | chr1.4:76351147-76351166 | None:intergenic | 25.0% |
| ! | AATACACAAAAGATGATAAC+TGG | - | chr1.4:76350164-76350183 | None:intergenic | 25.0% |
| ! | ATCCATTTATTTCCATTGTT+GGG | + | chr1.4:76350310-76350329 | MS.gene006136:intron | 25.0% |
| ! | ATCTGATGACAAAATTGAAT+CGG | - | chr1.4:76352054-76352073 | None:intergenic | 25.0% |
| ! | CTGAATGATGAAAATATTCA+TGG | - | chr1.4:76351669-76351688 | None:intergenic | 25.0% |
| ! | GACCTAAAAATATATACTGT+GGG | - | chr1.4:76350712-76350731 | None:intergenic | 25.0% |
| ! | GTAATCATAAGTACAAAGTT+CGG | - | chr1.4:76348928-76348947 | None:intergenic | 25.0% |
| ! | GTTGAATGTTGAGTATTATT+GGG | + | chr1.4:76348765-76348784 | MS.gene006136:intron | 25.0% |
| ! | TATAGATCGTTACAAAAGAT+TGG | - | chr1.4:76350676-76350695 | None:intergenic | 25.0% |
| ! | TATCCATTTATTTCCATTGT+TGG | + | chr1.4:76350309-76350328 | MS.gene006136:intron | 25.0% |
| ! | TCTACAATTGTATAATCAGT+GGG | + | chr1.4:76348825-76348844 | MS.gene006136:intron | 25.0% |
| ! | TGTTGAATGTTGAGTATTAT+TGG | + | chr1.4:76348764-76348783 | MS.gene006136:intron | 25.0% |
| ! | TTCTACAATTGTATAATCAG+TGG | + | chr1.4:76348824-76348843 | MS.gene006136:intron | 25.0% |
| ! | TTGTTCAAAAAAGACAGTAT+AGG | - | chr1.4:76349937-76349956 | None:intergenic | 25.0% |
| ! | TTTGTACTATTAATGCATCA+GGG | + | chr1.4:76349873-76349892 | MS.gene006136:intron | 25.0% |
| !! | ACATAATGCCTTAATGTTTT+GGG | + | chr1.4:76349411-76349430 | MS.gene006136:intron | 25.0% |
| !! | ACATTAAGGCATTATGTATA+TGG | - | chr1.4:76349408-76349427 | None:intergenic | 25.0% |
| !! | ATCCCACAGTATATATTTTT+AGG | + | chr1.4:76350707-76350726 | MS.gene006136:intron | 25.0% |
| !! | CAATTTTCCATTTGTATCTT+TGG | + | chr1.4:76349102-76349121 | MS.gene006136:intron | 25.0% |
| !! | CTGATGGATAATAATGATAT+TGG | + | chr1.4:76351226-76351245 | MS.gene006136:CDS | 25.0% |
| !! | CTTTTGCAGAAATTCATATT+GGG | + | chr1.4:76350074-76350093 | MS.gene006136:intron | 25.0% |
| !! | GCATTTTCTTCATATTATTC+AGG | + | chr1.4:76350206-76350225 | MS.gene006136:CDS | 25.0% |
| !! | TACATAATGCCTTAATGTTT+TGG | + | chr1.4:76349410-76349429 | MS.gene006136:intron | 25.0% |
| !! | TAGAAGTATATGCATAAACA+TGG | + | chr1.4:76349750-76349769 | MS.gene006136:intron | 25.0% |
| !! | TCAGAAGTCATTATTTCTTT+GGG | - | chr1.4:76349656-76349675 | None:intergenic | 25.0% |
| !! | TCTTTTGCAGAAATTCATAT+TGG | + | chr1.4:76350073-76350092 | MS.gene006136:intron | 25.0% |
| !! | TGTTTGTTGATTATTGAAGA+AGG | + | chr1.4:76349206-76349225 | MS.gene006136:intron | 25.0% |
| !! | TTCAGAAGTCATTATTTCTT+TGG | - | chr1.4:76349657-76349676 | None:intergenic | 25.0% |
| !!! | AACTGTACTATTTTGTTATG+TGG | + | chr1.4:76351618-76351637 | MS.gene006136:intron | 25.0% |
| !!! | TGTTTGATTTTACTAAAGGA+AGG | + | chr1.4:76350602-76350621 | MS.gene006136:intron | 25.0% |
| AAAAAGACAGTATAGGAGAT+TGG | - | chr1.4:76349930-76349949 | None:intergenic | 30.0% | |
| AACATTTAACAGAACTTACG+TGG | - | chr1.4:76350268-76350287 | None:intergenic | 30.0% | |
| AATATTTCACCTTTACAGGA+AGG | - | chr1.4:76350893-76350912 | None:intergenic | 30.0% | |
| AATCCAGACTCAAACATATT+TGG | + | chr1.4:76348880-76348899 | MS.gene006136:intron | 30.0% | |
| ACAAAAGAAGTAATGGTCAA+TGG | + | chr1.4:76350867-76350886 | MS.gene006136:CDS | 30.0% | |
| ACCAAAAAAATTGTGAGTGT+TGG | + | chr1.4:76348981-76349000 | MS.gene006136:intron | 30.0% | |
| ACTTTGTACTTATGATTACG+AGG | + | chr1.4:76348929-76348948 | MS.gene006136:intron | 30.0% | |
| ATGTGGAAATTAATACGCAA+AGG | + | chr1.4:76351635-76351654 | MS.gene006136:intron | 30.0% | |
| CAAACATCCAAAGATACAAA+TGG | - | chr1.4:76349112-76349131 | None:intergenic | 30.0% | |
| CCAAAAAAATTGTGAGTGTT+GGG | + | chr1.4:76348982-76349001 | MS.gene006136:intron | 30.0% | |
| CTCGATTAAAAACATTGATC+CGG | - | chr1.4:76351749-76351768 | None:intergenic | 30.0% | |
| GGACCTAAAAATATATACTG+TGG | - | chr1.4:76350713-76350732 | None:intergenic | 30.0% | |
| GGATAATAATGATATTGGGA+CGG | + | chr1.4:76351231-76351250 | MS.gene006136:CDS | 30.0% | |
| GTTGAAGATGATCTAGATAT+CGG | + | chr1.4:76351927-76351946 | MS.gene006136:CDS | 30.0% | |
| GTTTGTACTATTAATGCATC+AGG | + | chr1.4:76349872-76349891 | MS.gene006136:intron | 30.0% | |
| TACCCCATTGATAAAGTAAA+GGG | + | chr1.4:76349624-76349643 | MS.gene006136:intron | 30.0% | |
| TCACAATATTTCACCTTTAC+AGG | - | chr1.4:76350897-76350916 | None:intergenic | 30.0% | |
| TCACCCTTTACTTTATCAAT+GGG | - | chr1.4:76349630-76349649 | None:intergenic | 30.0% | |
| TCAGATATGATTACAATCAC+TGG | + | chr1.4:76349158-76349177 | MS.gene006136:intron | 30.0% | |
| TCTGATGACAAAATTGAATC+GGG | - | chr1.4:76352053-76352072 | None:intergenic | 30.0% | |
| TGAAAGATATAGTGCATGAT+AGG | + | chr1.4:76349680-76349699 | MS.gene006136:intron | 30.0% | |
| TGAATTTCTGCAAAAGATTC+AGG | - | chr1.4:76350070-76350089 | None:intergenic | 30.0% | |
| TTACCCCATTGATAAAGTAA+AGG | + | chr1.4:76349623-76349642 | MS.gene006136:intron | 30.0% | |
| ! | AACATTGAAAGCATAACTGA+AGG | - | chr1.4:76349190-76349209 | None:intergenic | 30.0% |
| ! | CTGTTAATGCTGTAATCTTT+TGG | + | chr1.4:76349966-76349985 | MS.gene006136:intron | 30.0% |
| ! | CTTCTTCATGTTTGTTTCTT+CGG | + | chr1.4:76351150-76351169 | MS.gene006136:CDS | 30.0% |
| ! | TCTTTTGTGTATTTGTAGCA+AGG | + | chr1.4:76350171-76350190 | MS.gene006136:CDS | 30.0% |
| !! | ATTTTACATCAAGGTTCTGA+TGG | + | chr1.4:76351210-76351229 | MS.gene006136:CDS | 30.0% |
| !! | TATTTGTTATTATTGGGGAG+AGG | + | chr1.4:76349051-76349070 | MS.gene006136:intron | 30.0% |
| !! | TTGGTTTTCTAGTCAACATT+GGG | + | chr1.4:76349843-76349862 | MS.gene006136:intron | 30.0% |
| !!! | AGGATATGCTATTTTAGTAG+TGG | + | chr1.4:76350226-76350245 | MS.gene006136:CDS | 30.0% |
| !!! | CAGTATATATTTTTAGGTCC+TGG | + | chr1.4:76350713-76350732 | MS.gene006136:intron | 30.0% |
| !!! | TTTGGTTTTCTAGTCAACAT+TGG | + | chr1.4:76349842-76349861 | MS.gene006136:intron | 30.0% |
| !!! | TTTTTTTGGTTTTAACCCTC+CGG | - | chr1.4:76348971-76348990 | None:intergenic | 30.0% |
| AAAAGAGAAATTGACTGACC+TGG | - | chr1.4:76351372-76351391 | None:intergenic | 35.0% | |
| ATTATGAATGAGAGCAGTGT+TGG | + | chr1.4:76349365-76349384 | MS.gene006136:intron | 35.0% | |
| ATTCAGAATAGAAGGAGCAA+TGG | + | chr1.4:76352005-76352024 | MS.gene006136:CDS | 35.0% | |
| ATTGGTTGGATTAAATGGTC+TGG | + | chr1.4:76349565-76349584 | MS.gene006136:intron | 35.0% | |
| CAAACCAAGGAAATCTGAAA+GGG | + | chr1.4:76351463-76351482 | MS.gene006136:intron | 35.0% | |
| CACCCTTTACTTTATCAATG+GGG | - | chr1.4:76349629-76349648 | None:intergenic | 35.0% | |
| CAGAAACTATGTCTCATCAA+AGG | + | chr1.4:76352181-76352200 | MS.gene006136:CDS | 35.0% | |
| CAGGAGATAATTACGAGATA+TGG | - | chr1.4:76350051-76350070 | None:intergenic | 35.0% | |
| CATTAAAATCACAGATGCAG+GGG | - | chr1.4:76351278-76351297 | None:intergenic | 35.0% | |
| CATTACTTCCTTTCCAAACT+TGG | - | chr1.4:76348537-76348556 | None:intergenic | 35.0% | |
| CCATTAAAATCACAGATGCA+GGG | - | chr1.4:76351279-76351298 | None:intergenic | 35.0% | |
| CTCACCCTTTACTTTATCAA+TGG | - | chr1.4:76349631-76349650 | None:intergenic | 35.0% | |
| CTCTCATTCATAATCGATGT+GGG | - | chr1.4:76349359-76349378 | None:intergenic | 35.0% | |
| CTTATTGTTTCATCTCTCTG+TGG | + | chr1.4:76351299-76351318 | MS.gene006136:CDS | 35.0% | |
| CTTGATGTAAAATGCTGAGA+AGG | - | chr1.4:76351203-76351222 | None:intergenic | 35.0% | |
| GAAAACCAAAACACTTCAGT+AGG | - | chr1.4:76349832-76349851 | None:intergenic | 35.0% | |
| GTCCCAACAATGGAAATAAA+TGG | - | chr1.4:76350315-76350334 | None:intergenic | 35.0% | |
| GTTTGTAACTATGCAAACCA+AGG | + | chr1.4:76351450-76351469 | MS.gene006136:intron | 35.0% | |
| TAGCCAAATATGTTTGAGTC+TGG | - | chr1.4:76348886-76348905 | None:intergenic | 35.0% | |
| TATGAATCTTCTACAGTAGC+CGG | + | chr1.4:76350813-76350832 | MS.gene006136:CDS | 35.0% | |
| TATTGAAGATATCACAGCGT+AGG | + | chr1.4:76351958-76351977 | MS.gene006136:CDS | 35.0% | |
| TCATAACGAAACTCTTCTTC+TGG | - | chr1.4:76350798-76350817 | None:intergenic | 35.0% | |
| TCTAGATCATCTTCAACCTT+AGG | - | chr1.4:76351924-76351943 | None:intergenic | 35.0% | |
| TCTCAAATTATTACCGGTGT+CGG | + | chr1.4:76350517-76350536 | MS.gene006136:intron | 35.0% | |
| TCTTCTTCATTGATGTGCTT+GGG | + | chr1.4:76351060-76351079 | MS.gene006136:intron | 35.0% | |
| TGAGACATAGTTTCTGCTTT+CGG | - | chr1.4:76352177-76352196 | None:intergenic | 35.0% | |
| TGCAGAAATTCATATTGGGA+GGG | + | chr1.4:76350078-76350097 | MS.gene006136:intron | 35.0% | |
| TTATTTCCATTGTTGGGACT+TGG | + | chr1.4:76350316-76350335 | MS.gene006136:intron | 35.0% | |
| TTCAACACAGTTGTTGCATA+TGG | - | chr1.4:76350961-76350980 | None:intergenic | 35.0% | |
| TTCTTCTTCATTGATGTGCT+TGG | + | chr1.4:76351059-76351078 | MS.gene006136:intron | 35.0% | |
| TTGCAGAAATTCATATTGGG+AGG | + | chr1.4:76350077-76350096 | MS.gene006136:intron | 35.0% | |
| ! | ACCATTACTTCTTTTGTTCG+TGG | - | chr1.4:76350864-76350883 | None:intergenic | 35.0% |
| ! | CAGTGTTGGATATATAAGAG+AGG | + | chr1.4:76349379-76349398 | MS.gene006136:intron | 35.0% |
| ! | CCATTACTTCTTTTGTTCGT+GGG | - | chr1.4:76350863-76350882 | None:intergenic | 35.0% |
| ! | CTTCTCAGCATTTTACATCA+AGG | + | chr1.4:76351201-76351220 | MS.gene006136:CDS | 35.0% |
| ! | GCAAATCTTTTGAATGCACA+AGG | + | chr1.4:76351546-76351565 | MS.gene006136:intron | 35.0% |
| ! | TATTTGTAGCAAGGCATCTT+CGG | + | chr1.4:76350180-76350199 | MS.gene006136:CDS | 35.0% |
| ! | TCTGTATCGGAAGTTTTCAT+AGG | - | chr1.4:76351718-76351737 | None:intergenic | 35.0% |
| ! | TGGGTATGTTCTAGATTTCT+GGG | + | chr1.4:76348611-76348630 | MS.gene006136:intron | 35.0% |
| ! | TTGGGTATGTTCTAGATTTC+TGG | + | chr1.4:76348610-76348629 | MS.gene006136:intron | 35.0% |
| !! | CGGATCAATGTTTTTAATCG+AGG | + | chr1.4:76351747-76351766 | MS.gene006136:CDS | 35.0% |
| !! | TAATGCCTTAATGTTTTGGG+TGG | + | chr1.4:76349414-76349433 | MS.gene006136:intron | 35.0% |
| !!! | CCCAACACTCACAATTTTTT+TGG | - | chr1.4:76348985-76349004 | None:intergenic | 35.0% |
| AATCGGGTTCAGCTGTATTA+TGG | - | chr1.4:76352037-76352056 | None:intergenic | 40.0% | |
| ACGAGGACATTCAGAATAGA+AGG | + | chr1.4:76351997-76352016 | MS.gene006136:CDS | 40.0% | |
| AGAAATTCATATTGGGAGGG+AGG | + | chr1.4:76350081-76350100 | MS.gene006136:intron | 40.0% | |
| AGAAGGATGACATTCATGTC+AGG | + | chr1.4:76349223-76349242 | MS.gene006136:intron | 40.0% | |
| ATAATGATATTGGGACGGTG+TGG | + | chr1.4:76351236-76351255 | MS.gene006136:CDS | 40.0% | |
| ATCGGGTTCAGCTGTATTAT+GGG | - | chr1.4:76352036-76352055 | None:intergenic | 40.0% | |
| CAACAACAGAGTGATAAGCA+GGG | - | chr1.4:76350132-76350151 | None:intergenic | 40.0% | |
| CATCTCCACCCAAAACATTA+AGG | - | chr1.4:76349422-76349441 | None:intergenic | 40.0% | |
| CCCACGAACAAAAGAAGTAA+TGG | + | chr1.4:76350860-76350879 | MS.gene006136:CDS | 40.0% | |
| CTAACAGGTAAGTAGGAAGA+TGG | - | chr1.4:76350409-76350428 | None:intergenic | 40.0% | |
| CTTACCTGTTAGATGAAGCA+CGG | + | chr1.4:76350417-76350436 | MS.gene006136:intron | 40.0% | |
| GAATTCCTAGGAATGATACC+CGG | - | chr1.4:76350768-76350787 | None:intergenic | 40.0% | |
| GATCATCTTCAACCTTAGGA+CGG | - | chr1.4:76351920-76351939 | None:intergenic | 40.0% | |
| GCAAACCAAGGAAATCTGAA+AGG | + | chr1.4:76351462-76351481 | MS.gene006136:intron | 40.0% | |
| GCCATTAAAATCACAGATGC+AGG | - | chr1.4:76351280-76351299 | None:intergenic | 40.0% | |
| GCTCTCATTCATAATCGATG+TGG | - | chr1.4:76349360-76349379 | None:intergenic | 40.0% | |
| GCTTCATCTAACAGGTAAGT+AGG | - | chr1.4:76350416-76350435 | None:intergenic | 40.0% | |
| GCTTTCGGTGACATTTGAAT+TGG | - | chr1.4:76352162-76352181 | None:intergenic | 40.0% | |
| GGCTAGACTTTACTTAGCTT+TGG | + | chr1.4:76348901-76348920 | MS.gene006136:intron | 40.0% | |
| GGGTCTGTGATTTCTTTAGT+AGG | + | chr1.4:76348631-76348650 | MS.gene006136:intron | 40.0% | |
| GTACCTTATAAGCACAAACC+AGG | + | chr1.4:76351351-76351370 | MS.gene006136:CDS | 40.0% | |
| TAACGAAACTCTTCTTCTGG+TGG | - | chr1.4:76350795-76350814 | None:intergenic | 40.0% | |
| TCAACAACAGAGTGATAAGC+AGG | - | chr1.4:76350133-76350152 | None:intergenic | 40.0% | |
| TTGGGAAAGAAGTGGAAACT+GGG | + | chr1.4:76352115-76352134 | MS.gene006136:CDS | 40.0% | |
| TTTGAGTAGAGCTATCATGG+AGG | + | chr1.4:76349271-76349290 | MS.gene006136:intron | 40.0% | |
| TTTGAGTCTGGATTCGAACT+CGG | - | chr1.4:76348874-76348893 | None:intergenic | 40.0% | |
| ! | CCCTGCATCTGTGATTTTAA+TGG | + | chr1.4:76351276-76351295 | MS.gene006136:CDS | 40.0% |
| ! | TGACCTGGTTTGTGCTTATA+AGG | - | chr1.4:76351357-76351376 | None:intergenic | 40.0% |
| ! | TGCTTTGAGTAGAGCTATCA+TGG | + | chr1.4:76349268-76349287 | MS.gene006136:intron | 40.0% |
| ! | TTCATCTCTCTGTGGTTTGT+TGG | + | chr1.4:76351307-76351326 | MS.gene006136:CDS | 40.0% |
| ! | TTGTTCAAGAGGAGGTACAA+AGG | + | chr1.4:76351838-76351857 | MS.gene006136:CDS | 40.0% |
| ! | TTTCAGGGCTTTTGTTCAAG+AGG | + | chr1.4:76351827-76351846 | MS.gene006136:CDS | 40.0% |
| ! | TTTTACTTCTGCACGTGATC+CGG | + | chr1.4:76350746-76350765 | MS.gene006136:CDS | 40.0% |
| !! | AAGTAAAACAGAGAAGCACC+AGG | - | chr1.4:76350734-76350753 | None:intergenic | 40.0% |
| !! | TGGGACTTGGTTTGTGTTTA+AGG | + | chr1.4:76350329-76350348 | MS.gene006136:intron | 40.0% |
| !! | TTGCACCTACTGAAGTGTTT+TGG | + | chr1.4:76349824-76349843 | MS.gene006136:intron | 40.0% |
| !!! | CATGTCAGGTGGTTTTTTGT+TGG | + | chr1.4:76349237-76349256 | MS.gene006136:intron | 40.0% |
| !!! | TCTGAGCTAGTTTTTGTTGC+TGG | + | chr1.4:76348663-76348682 | MS.gene006136:intron | 40.0% |
| AACTTCCGATACAGAGCTGA+TGG | + | chr1.4:76351723-76351742 | MS.gene006136:CDS | 45.0% | |
| ACAGTCAGAAGTCACTTCAC+AGG | - | chr1.4:76349311-76349330 | None:intergenic | 45.0% | |
| AGCCCTCAAGGAACAATTTC+AGG | + | chr1.4:76351811-76351830 | MS.gene006136:CDS | 45.0% | |
| AGCCCTGAAATTGTTCCTTG+AGG | - | chr1.4:76351817-76351836 | None:intergenic | 45.0% | |
| AGGATGACATTCATGTCAGG+TGG | + | chr1.4:76349226-76349245 | MS.gene006136:intron | 45.0% | |
| AGTGGGTCAACCAAGTGATT+CGG | + | chr1.4:76348842-76348861 | MS.gene006136:intron | 45.0% | |
| ATCGCCCTTTCAGATTTCCT+TGG | - | chr1.4:76351470-76351489 | None:intergenic | 45.0% | |
| ATGCAGTGTCAAGGTCTCTT+AGG | + | chr1.4:76349439-76349458 | MS.gene006136:intron | 45.0% | |
| ATTACGAGGCCTCATTTCCT+AGG | + | chr1.4:76348943-76348962 | MS.gene006136:intron | 45.0% | |
| ATTCATATTGGGAGGGAGGT+TGG | + | chr1.4:76350085-76350104 | MS.gene006136:CDS | 45.0% | |
| CACAAACCAAGTCCCAACAA+TGG | - | chr1.4:76350325-76350344 | None:intergenic | 45.0% | |
| CACGATACAAAAACCGACAC+CGG | - | chr1.4:76350533-76350552 | None:intergenic | 45.0% | |
| CAGTCAGAAGTCACTTCACA+GGG | - | chr1.4:76349310-76349329 | None:intergenic | 45.0% | |
| CCACAATACGATCTGATGCT+AGG | + | chr1.4:76352084-76352103 | MS.gene006136:CDS | 45.0% | |
| CCTAGCATCAGATCGTATTG+TGG | - | chr1.4:76352087-76352106 | None:intergenic | 45.0% | |
| CGATCTCCACCTAAATCATC+TGG | - | chr1.4:76351897-76351916 | None:intergenic | 45.0% | |
| CGTGAACCAGATGATTTAGG+TGG | + | chr1.4:76351888-76351907 | MS.gene006136:CDS | 45.0% | |
| GAATATTGAGCAACTCGACG+AGG | + | chr1.4:76351980-76351999 | MS.gene006136:CDS | 45.0% | |
| GAATGCACAAGGCATGCTAT+GGG | + | chr1.4:76351557-76351576 | MS.gene006136:intron | 45.0% | |
| GCACAGAAATAAAGCCCTCA+AGG | + | chr1.4:76351799-76351818 | MS.gene006136:CDS | 45.0% | |
| GCCCTCAAGGAACAATTTCA+GGG | + | chr1.4:76351812-76351831 | MS.gene006136:CDS | 45.0% | |
| GCCCTGAAATTGTTCCTTGA+GGG | - | chr1.4:76351816-76351835 | None:intergenic | 45.0% | |
| GGACGTGAACCAGATGATTT+AGG | + | chr1.4:76351885-76351904 | MS.gene006136:CDS | 45.0% | |
| GGTTGGATTAAATGGTCTGG+AGG | + | chr1.4:76349568-76349587 | MS.gene006136:intron | 45.0% | |
| GTGAAGTGACTTCTGACTGT+TGG | + | chr1.4:76349311-76349330 | MS.gene006136:intron | 45.0% | |
| GTTGGGAAAGAAGTGGAAAC+TGG | + | chr1.4:76352114-76352133 | MS.gene006136:CDS | 45.0% | |
| TCGGGTTCAGCTGTATTATG+GGG | - | chr1.4:76352035-76352054 | None:intergenic | 45.0% | |
| TGAATGCACAAGGCATGCTA+TGG | + | chr1.4:76351556-76351575 | MS.gene006136:intron | 45.0% | |
| TGCAGTGTCAAGGTCTCTTA+GGG | + | chr1.4:76349440-76349459 | MS.gene006136:intron | 45.0% | |
| TGCATCGTGAGACACAAACA+CGG | - | chr1.4:76350557-76350576 | None:intergenic | 45.0% | |
| TTTACTTCTGCACGTGATCC+GGG | + | chr1.4:76350747-76350766 | MS.gene006136:CDS | 45.0% | |
| TTTCGATCACCATTGCCCTT+GGG | + | chr1.4:76350983-76351002 | MS.gene006136:CDS | 45.0% | |
| ! | CTTTTGTTCGTGGGAACTGA+AGG | - | chr1.4:76350854-76350873 | None:intergenic | 45.0% |
| ! | TCTGGTGGATGTGAATTCCT+AGG | - | chr1.4:76350780-76350799 | None:intergenic | 45.0% |
| ! | TGGGTTTTTCCAATGTGCAG+AGG | + | chr1.4:76351116-76351135 | MS.gene006136:intron | 45.0% |
| !! | AAGGCTTGGTGTTTGTTGTC+CGG | - | chr1.4:76350835-76350854 | None:intergenic | 45.0% |
| !! | ATCTCTCTGTGGTTTGTTGG+TGG | + | chr1.4:76351310-76351329 | MS.gene006136:CDS | 45.0% |
| !! | TGGTTTGTTGGTGGACTAAC+TGG | + | chr1.4:76351319-76351338 | MS.gene006136:CDS | 45.0% |
| !! | GTAAATATATATAATATATT+AGG | - | chr1.4:76350387-76350406 | None:intergenic | 5.0% |
| ACGGTAGTTCCTCTGCACAT+TGG | - | chr1.4:76351128-76351147 | None:intergenic | 50.0% | |
| AGGCCTCATTTCCTAGGAAC+CGG | + | chr1.4:76348949-76348968 | MS.gene006136:intron | 50.0% | |
| ATCGTACCAGACCGATGCAT+TGG | - | chr1.4:76351013-76351032 | None:intergenic | 50.0% | |
| CAAAGCGCGTGTACCAAGTT+TGG | + | chr1.4:76348521-76348540 | MS.gene006136:CDS | 50.0% | |
| CGCGTGTACCAAGTTTGGAA+AGG | + | chr1.4:76348526-76348545 | MS.gene006136:CDS | 50.0% | |
| CGGGAAATGACTGTAGTCAG+CGG | - | chr1.4:76351864-76351883 | None:intergenic | 50.0% | |
| CGTCGAACACACCTAATTCG+AGG | - | chr1.4:76350448-76350467 | None:intergenic | 50.0% | |
| CTCATTTCCTAGGAACCGGA+GGG | + | chr1.4:76348953-76348972 | MS.gene006136:intron | 50.0% | |
| CTGACTACAGTCATTTCCCG+GGG | + | chr1.4:76351864-76351883 | MS.gene006136:CDS | 50.0% | |
| GCTGACTACAGTCATTTCCC+GGG | + | chr1.4:76351863-76351882 | MS.gene006136:CDS | 50.0% | |
| GGTCAATGGCCTTCCTGTAA+AGG | + | chr1.4:76350881-76350900 | MS.gene006136:CDS | 50.0% | |
| GTGATCCGGGTATCATTCCT+AGG | + | chr1.4:76350760-76350779 | MS.gene006136:CDS | 50.0% | |
| GTGGGTCAACCAAGTGATTC+GGG | + | chr1.4:76348843-76348862 | MS.gene006136:intron | 50.0% | |
| GTGTCCGTGCTTCATCTAAC+AGG | - | chr1.4:76350424-76350443 | None:intergenic | 50.0% | |
| GTTGGGGAGTCCATAGTCTA+GGG | - | chr1.4:76349502-76349521 | None:intergenic | 50.0% | |
| GTTTCGATCACCATTGCCCT+TGG | + | chr1.4:76350982-76351001 | MS.gene006136:CDS | 50.0% | |
| TAGGTGCAAGTGTGCAACAG+AGG | - | chr1.4:76349813-76349832 | None:intergenic | 50.0% | |
| TCGGATTCTCCCGAATCACT+TGG | - | chr1.4:76348855-76348874 | None:intergenic | 50.0% | |
| TGATATTGGGACGGTGTGGA+AGG | + | chr1.4:76351240-76351259 | MS.gene006136:CDS | 50.0% | |
| TGATGCTAGGCACTCGAGTT+GGG | + | chr1.4:76352097-76352116 | MS.gene006136:CDS | 50.0% | |
| TGGTATTTGGACCTGATGCC+AGG | + | chr1.4:76350105-76350124 | MS.gene006136:CDS | 50.0% | |
| TGTTGGGGAGTCCATAGTCT+AGG | - | chr1.4:76349503-76349522 | None:intergenic | 50.0% | |
| TTGGGGAGTCCATAGTCTAG+GGG | - | chr1.4:76349501-76349520 | None:intergenic | 50.0% | |
| ! | AATCATCTGGTTCACGTCCC+CGG | - | chr1.4:76351884-76351903 | None:intergenic | 50.0% |
| ! | CAGGGCTTTTGTTCAAGAGG+AGG | + | chr1.4:76351830-76351849 | MS.gene006136:CDS | 50.0% |
| ! | CGCTGACTACAGTCATTTCC+CGG | + | chr1.4:76351862-76351881 | MS.gene006136:CDS | 50.0% |
| !! | CACTCGAGTTGGGAAAGAAG+TGG | + | chr1.4:76352107-76352126 | MS.gene006136:CDS | 50.0% |
| !! | CATATGTGTCGGTGTCGTGT+CGG | - | chr1.4:76350476-76350495 | None:intergenic | 50.0% |
| !! | GTTTTAACCCTCCGGTTCCT+AGG | - | chr1.4:76348963-76348982 | None:intergenic | 50.0% |
| !! | TTGGGAGGGAGGTTGGTATT+TGG | + | chr1.4:76350092-76350111 | MS.gene006136:CDS | 50.0% |
| AGCAATGCGAGCAACGAGGA+GGG | - | chr1.4:76350938-76350957 | None:intergenic | 55.0% | |
| AGCCAGCTGTAATCAGGCAC+AGG | - | chr1.4:76349019-76349038 | None:intergenic | 55.0% | |
| ATAAGCAGGGACCTGGCATC+AGG | - | chr1.4:76350119-76350138 | None:intergenic | 55.0% | |
| ATGGAGCAATGCGAGCAACG+AGG | - | chr1.4:76350942-76350961 | None:intergenic | 55.0% | |
| CAGAGTGATAAGCAGGGACC+TGG | - | chr1.4:76350126-76350145 | None:intergenic | 55.0% | |
| CCTCATTTCCTAGGAACCGG+AGG | + | chr1.4:76348952-76348971 | MS.gene006136:intron | 55.0% | |
| CCTCCGGTTCCTAGGAAATG+AGG | - | chr1.4:76348955-76348974 | None:intergenic | 55.0% | |
| CTGATGCTAGGCACTCGAGT+TGG | + | chr1.4:76352096-76352115 | MS.gene006136:CDS | 55.0% | |
| GATCACCATTGCCCTTGGGT+GGG | + | chr1.4:76350987-76351006 | MS.gene006136:CDS | 55.0% | |
| GCAAGTGTGCAACAGAGGAG+TGG | - | chr1.4:76349808-76349827 | None:intergenic | 55.0% | |
| GCACGGACACTCCTCGAATT+AGG | + | chr1.4:76350434-76350453 | MS.gene006136:intron | 55.0% | |
| GGAGCAAGCCAGCTGTAATC+AGG | - | chr1.4:76349025-76349044 | None:intergenic | 55.0% | |
| GTCAAGGTCTCTTAGGGTCC+TGG | + | chr1.4:76349446-76349465 | MS.gene006136:intron | 55.0% | |
| GTTCGTGGGAACTGAAGGCT+TGG | - | chr1.4:76350849-76350868 | None:intergenic | 55.0% | |
| TCCGATACAGAGCTGATGGC+CGG | + | chr1.4:76351727-76351746 | MS.gene006136:CDS | 55.0% | |
| TCCGGCCATCAGCTCTGTAT+CGG | - | chr1.4:76351731-76351750 | None:intergenic | 55.0% | |
| TGCCTGTGCCTGATTACAGC+TGG | + | chr1.4:76349014-76349033 | MS.gene006136:intron | 55.0% | |
| TGGGTGGAGATGCAGTGTCA+AGG | + | chr1.4:76349430-76349449 | MS.gene006136:intron | 55.0% | |
| ! | ATCATCTGGTTCACGTCCCC+GGG | - | chr1.4:76351883-76351902 | None:intergenic | 55.0% |
| ! | CGGGAATGGGCTCAAATTCC+AGG | - | chr1.4:76349467-76349486 | None:intergenic | 55.0% |
| ! | TCCATAGTCTAGGGGAGTGC+CGG | - | chr1.4:76349493-76349512 | None:intergenic | 55.0% |
| AGGTGGAGATCGCCGTCCTA+AGG | + | chr1.4:76351905-76351924 | MS.gene006136:CDS | 60.0% | |
| ATTGGCCCACCCAAGGGCAA+TGG | - | chr1.4:76350995-76351014 | None:intergenic | 60.0% | |
| CCTTGGGTGGGCCAATGCAT+CGG | + | chr1.4:76350999-76351018 | MS.gene006136:CDS | 60.0% | |
| CGATCACCATTGCCCTTGGG+TGG | + | chr1.4:76350986-76351005 | MS.gene006136:CDS | 60.0% | |
| GAGCAATGCGAGCAACGAGG+AGG | - | chr1.4:76350939-76350958 | None:intergenic | 60.0% | |
| TTTGAGCCCATTCCCGCTCC+CGG | + | chr1.4:76349471-76349490 | MS.gene006136:intron | 60.0% | |
| ! | CGATGCATTGGCCCACCCAA+GGG | - | chr1.4:76351001-76351020 | None:intergenic | 60.0% |
| !! | CCATAGTCTAGGGGAGTGCC+GGG | - | chr1.4:76349492-76349511 | None:intergenic | 60.0% |
| CCCGGCACTCCCCTAGACTA+TGG | + | chr1.4:76349489-76349508 | MS.gene006136:intron | 65.0% | |
| ! | CCGATGCATTGGCCCACCCA+AGG | - | chr1.4:76351002-76351021 | None:intergenic | 65.0% |
| ! | GGTGGGCCAATGCATCGGTC+TGG | + | chr1.4:76351004-76351023 | MS.gene006136:CDS | 65.0% |
| !! | GGAGTGCCGGGAGCGGGAAT+GGG | - | chr1.4:76349480-76349499 | None:intergenic | 70.0% |
| !! | GTCTAGGGGAGTGCCGGGAG+CGG | - | chr1.4:76349487-76349506 | None:intergenic | 70.0% |
| !! | TCTAGGGGAGTGCCGGGAGC+GGG | - | chr1.4:76349486-76349505 | None:intergenic | 70.0% |
| !! | GGGAGTGCCGGGAGCGGGAA+TGG | - | chr1.4:76349481-76349500 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 76348514 | 76352217 | 76348514 | ID=MS.gene006136 |
| chr1.4 | mRNA | 76348514 | 76352217 | 76348514 | ID=MS.gene006136.t1;Parent=MS.gene006136 |
| chr1.4 | exon | 76348514 | 76348555 | 76348514 | ID=MS.gene006136.t1.exon1;Parent=MS.gene006136.t1 |
| chr1.4 | CDS | 76348514 | 76348555 | 76348514 | ID=cds.MS.gene006136.t1;Parent=MS.gene006136.t1 |
| chr1.4 | exon | 76350083 | 76350268 | 76350083 | ID=MS.gene006136.t1.exon2;Parent=MS.gene006136.t1 |
| chr1.4 | CDS | 76350083 | 76350268 | 76350083 | ID=cds.MS.gene006136.t1;Parent=MS.gene006136.t1 |
| chr1.4 | exon | 76350729 | 76351025 | 76350729 | ID=MS.gene006136.t1.exon3;Parent=MS.gene006136.t1 |
| chr1.4 | CDS | 76350729 | 76351025 | 76350729 | ID=cds.MS.gene006136.t1;Parent=MS.gene006136.t1 |
| chr1.4 | exon | 76351136 | 76351372 | 76351136 | ID=MS.gene006136.t1.exon4;Parent=MS.gene006136.t1 |
| chr1.4 | CDS | 76351136 | 76351372 | 76351136 | ID=cds.MS.gene006136.t1;Parent=MS.gene006136.t1 |
| chr1.4 | exon | 76351711 | 76352217 | 76351711 | ID=MS.gene006136.t1.exon5;Parent=MS.gene006136.t1 |
| chr1.4 | CDS | 76351711 | 76352217 | 76351711 | ID=cds.MS.gene006136.t1;Parent=MS.gene006136.t1 |
| Gene Sequence |
| Protein sequence |
