Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007926.t1 | XP_013445523.1 | 97.4 | 417 | 11 | 0 | 1 | 417 | 1 | 417 | 4.90E-247 | 863.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007926.t1 | Q1PFD9 | 69.5 | 416 | 122 | 2 | 2 | 416 | 1 | 412 | 1.2e-180 | 634.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007926.t1 | A0A072TPV7 | 97.4 | 417 | 11 | 0 | 1 | 417 | 1 | 417 | 3.5e-247 | 863.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene065718 | MS.gene007926 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007926.t1 | MTR_8g463790 | 97.362 | 417 | 11 | 0 | 1 | 417 | 1 | 417 | 0.0 | 852 |
MS.gene007926.t1 | MTR_3g070900 | 50.704 | 355 | 166 | 4 | 60 | 409 | 99 | 449 | 6.69e-130 | 382 |
MS.gene007926.t1 | MTR_5g083260 | 49.857 | 349 | 170 | 3 | 66 | 410 | 78 | 425 | 2.29e-129 | 380 |
MS.gene007926.t1 | MTR_4g014440 | 46.883 | 401 | 192 | 7 | 18 | 410 | 21 | 408 | 6.10e-127 | 373 |
MS.gene007926.t1 | MTR_4g016940 | 48.725 | 353 | 173 | 3 | 64 | 409 | 76 | 427 | 1.65e-126 | 372 |
MS.gene007926.t1 | MTR_7g068920 | 49.008 | 353 | 172 | 3 | 64 | 409 | 70 | 421 | 3.61e-124 | 366 |
MS.gene007926.t1 | MTR_3g071650 | 49.709 | 344 | 168 | 3 | 71 | 410 | 89 | 431 | 9.08e-124 | 365 |
MS.gene007926.t1 | MTR_4g014430 | 49.123 | 342 | 172 | 2 | 69 | 409 | 106 | 446 | 9.84e-123 | 363 |
MS.gene007926.t1 | MTR_7g070060 | 43.902 | 410 | 208 | 8 | 12 | 410 | 12 | 410 | 9.04e-120 | 355 |
MS.gene007926.t1 | MTR_5g082880 | 46.000 | 350 | 181 | 4 | 69 | 410 | 163 | 512 | 2.97e-115 | 347 |
MS.gene007926.t1 | MTR_7g070060 | 45.946 | 296 | 149 | 6 | 124 | 410 | 15 | 308 | 4.43e-92 | 280 |
MS.gene007926.t1 | MTR_1g050448 | 42.566 | 343 | 173 | 9 | 71 | 409 | 53 | 375 | 6.43e-85 | 264 |
MS.gene007926.t1 | MTR_1g112210 | 39.766 | 342 | 185 | 9 | 71 | 409 | 59 | 382 | 2.03e-82 | 258 |
MS.gene007926.t1 | MTR_3g464570 | 38.329 | 347 | 195 | 6 | 71 | 410 | 43 | 377 | 1.04e-81 | 256 |
MS.gene007926.t1 | MTR_1g112210 | 39.181 | 342 | 174 | 10 | 71 | 409 | 59 | 369 | 6.73e-79 | 248 |
MS.gene007926.t1 | MTR_3g049330 | 37.249 | 349 | 186 | 7 | 68 | 409 | 28 | 350 | 2.51e-78 | 246 |
MS.gene007926.t1 | MTR_7g070060 | 42.857 | 294 | 150 | 6 | 12 | 297 | 12 | 295 | 2.85e-78 | 245 |
MS.gene007926.t1 | MTR_5g071350 | 35.165 | 364 | 209 | 8 | 62 | 410 | 49 | 400 | 2.49e-77 | 245 |
MS.gene007926.t1 | MTR_7g093450 | 35.876 | 354 | 200 | 8 | 71 | 410 | 248 | 588 | 7.17e-75 | 244 |
MS.gene007926.t1 | MTR_4g121560 | 34.699 | 366 | 200 | 8 | 71 | 416 | 114 | 460 | 1.54e-74 | 240 |
MS.gene007926.t1 | MTR_0136s0010 | 35.593 | 354 | 201 | 8 | 71 | 410 | 170 | 510 | 2.20e-74 | 241 |
MS.gene007926.t1 | MTR_2g073510 | 37.830 | 341 | 184 | 8 | 71 | 406 | 33 | 350 | 6.38e-74 | 235 |
MS.gene007926.t1 | MTR_7g094750 | 36.639 | 363 | 193 | 12 | 69 | 411 | 89 | 434 | 2.11e-73 | 237 |
MS.gene007926.t1 | MTR_5g033800 | 35.054 | 368 | 203 | 9 | 62 | 411 | 136 | 485 | 2.83e-73 | 238 |
MS.gene007926.t1 | MTR_4g079700 | 35.714 | 350 | 189 | 10 | 67 | 409 | 43 | 363 | 4.06e-73 | 233 |
MS.gene007926.t1 | MTR_2g022560 | 39.726 | 365 | 186 | 14 | 65 | 411 | 91 | 439 | 5.81e-73 | 236 |
MS.gene007926.t1 | MTR_4g126950 | 35.613 | 351 | 201 | 11 | 71 | 409 | 109 | 446 | 1.53e-72 | 234 |
MS.gene007926.t1 | MTR_3g035830 | 37.143 | 350 | 187 | 8 | 64 | 407 | 24 | 346 | 1.05e-71 | 229 |
MS.gene007926.t1 | MTR_2g015720 | 36.176 | 387 | 210 | 10 | 27 | 409 | 5 | 358 | 7.32e-71 | 227 |
MS.gene007926.t1 | MTR_3g021090 | 37.318 | 343 | 182 | 8 | 69 | 405 | 29 | 344 | 9.72e-71 | 229 |
MS.gene007926.t1 | MTR_7g109550 | 34.734 | 357 | 189 | 10 | 71 | 409 | 137 | 467 | 3.47e-70 | 229 |
MS.gene007926.t1 | MTR_2g091175 | 35.897 | 351 | 195 | 10 | 64 | 410 | 43 | 367 | 4.44e-70 | 226 |
MS.gene007926.t1 | MTR_4g088030 | 35.072 | 345 | 197 | 8 | 68 | 409 | 30 | 350 | 1.27e-68 | 221 |
MS.gene007926.t1 | MTR_5g034810 | 36.932 | 352 | 187 | 8 | 68 | 412 | 32 | 355 | 2.15e-68 | 221 |
MS.gene007926.t1 | MTR_5g059400 | 32.044 | 362 | 226 | 9 | 60 | 410 | 164 | 516 | 1.82e-67 | 223 |
MS.gene007926.t1 | MTR_1g116130 | 32.044 | 362 | 226 | 9 | 60 | 410 | 164 | 516 | 1.82e-67 | 223 |
MS.gene007926.t1 | MTR_3g021060 | 35.244 | 349 | 195 | 8 | 64 | 407 | 39 | 361 | 8.18e-67 | 217 |
MS.gene007926.t1 | MTR_1g111010 | 33.623 | 345 | 194 | 9 | 71 | 412 | 32 | 344 | 8.60e-67 | 216 |
MS.gene007926.t1 | MTR_4g087730 | 35.028 | 354 | 201 | 9 | 61 | 409 | 33 | 362 | 4.44e-66 | 215 |
MS.gene007926.t1 | MTR_1g058380 | 36.119 | 371 | 194 | 12 | 69 | 417 | 53 | 402 | 1.48e-65 | 215 |
MS.gene007926.t1 | MTR_8g069790 | 33.799 | 358 | 207 | 10 | 69 | 411 | 176 | 518 | 1.72e-65 | 218 |
MS.gene007926.t1 | MTR_2g073500 | 32.773 | 357 | 196 | 10 | 67 | 412 | 25 | 348 | 2.81e-64 | 210 |
MS.gene007926.t1 | MTR_3g090120 | 32.249 | 369 | 210 | 9 | 59 | 411 | 117 | 461 | 7.20e-61 | 204 |
MS.gene007926.t1 | MTR_3g464570 | 37.589 | 282 | 158 | 5 | 136 | 410 | 3 | 273 | 1.35e-60 | 198 |
MS.gene007926.t1 | MTR_8g093530 | 32.231 | 363 | 208 | 10 | 65 | 414 | 84 | 421 | 1.31e-58 | 197 |
MS.gene007926.t1 | MTR_7g094750 | 35.950 | 242 | 140 | 7 | 69 | 298 | 89 | 327 | 2.39e-48 | 167 |
MS.gene007926.t1 | MTR_5g033800 | 33.865 | 251 | 145 | 5 | 62 | 298 | 136 | 379 | 1.25e-46 | 164 |
MS.gene007926.t1 | MTR_6g061710 | 29.058 | 382 | 214 | 13 | 67 | 415 | 163 | 520 | 2.99e-45 | 164 |
MS.gene007926.t1 | MTR_1g076690 | 28.496 | 379 | 224 | 15 | 67 | 417 | 219 | 578 | 7.90e-44 | 161 |
MS.gene007926.t1 | MTR_6g016880 | 28.404 | 426 | 243 | 15 | 14 | 409 | 26 | 419 | 6.23e-41 | 150 |
MS.gene007926.t1 | MTR_8g027900 | 29.722 | 360 | 217 | 13 | 71 | 409 | 211 | 555 | 3.32e-40 | 150 |
MS.gene007926.t1 | MTR_8g104970 | 28.723 | 376 | 222 | 11 | 68 | 417 | 117 | 472 | 5.45e-40 | 149 |
MS.gene007926.t1 | MTR_7g033230 | 28.689 | 366 | 232 | 13 | 64 | 411 | 257 | 611 | 1.94e-39 | 149 |
MS.gene007926.t1 | MTR_7g033230 | 28.689 | 366 | 232 | 13 | 64 | 411 | 327 | 681 | 4.89e-39 | 149 |
MS.gene007926.t1 | MTR_7g019120 | 26.328 | 433 | 275 | 11 | 1 | 409 | 8 | 420 | 6.52e-39 | 145 |
MS.gene007926.t1 | MTR_6g016875 | 27.528 | 356 | 226 | 11 | 69 | 405 | 62 | 404 | 2.64e-38 | 143 |
MS.gene007926.t1 | MTR_5g035080 | 28.267 | 375 | 214 | 14 | 68 | 411 | 72 | 422 | 6.34e-38 | 142 |
MS.gene007926.t1 | MTR_5g035150 | 27.123 | 424 | 241 | 17 | 18 | 405 | 36 | 427 | 7.25e-38 | 142 |
MS.gene007926.t1 | MTR_8g093870 | 28.926 | 363 | 215 | 12 | 69 | 409 | 131 | 472 | 1.01e-37 | 142 |
MS.gene007926.t1 | MTR_2g016060 | 29.640 | 361 | 207 | 16 | 72 | 405 | 56 | 396 | 1.33e-37 | 141 |
MS.gene007926.t1 | MTR_3g109840 | 28.065 | 367 | 222 | 12 | 68 | 411 | 70 | 417 | 1.58e-37 | 141 |
MS.gene007926.t1 | MTR_4g092830 | 28.261 | 368 | 220 | 16 | 71 | 413 | 48 | 396 | 8.44e-36 | 136 |
MS.gene007926.t1 | MTR_5g035090 | 28.686 | 373 | 208 | 12 | 71 | 411 | 83 | 429 | 3.69e-35 | 135 |
MS.gene007926.t1 | MTR_8g099300 | 29.121 | 364 | 207 | 16 | 71 | 405 | 74 | 415 | 5.46e-35 | 134 |
MS.gene007926.t1 | MTR_5g035070 | 27.273 | 363 | 228 | 10 | 71 | 411 | 87 | 435 | 1.17e-33 | 131 |
MS.gene007926.t1 | MTR_4g125060 | 27.749 | 382 | 195 | 16 | 69 | 409 | 130 | 471 | 9.71e-33 | 129 |
MS.gene007926.t1 | MTR_4g125060 | 27.749 | 382 | 195 | 16 | 69 | 409 | 198 | 539 | 1.46e-32 | 129 |
MS.gene007926.t1 | MTR_4g125060 | 27.749 | 382 | 195 | 16 | 69 | 409 | 169 | 510 | 1.51e-32 | 129 |
MS.gene007926.t1 | MTR_6g016240 | 25.737 | 373 | 220 | 15 | 69 | 409 | 69 | 416 | 1.36e-28 | 116 |
MS.gene007926.t1 | MTR_6g007777 | 23.978 | 367 | 238 | 13 | 65 | 409 | 110 | 457 | 1.85e-27 | 114 |
MS.gene007926.t1 | MTR_5g069320 | 26.567 | 335 | 161 | 12 | 89 | 402 | 116 | 386 | 1.69e-26 | 110 |
MS.gene007926.t1 | MTR_7g019140 | 33.333 | 165 | 106 | 3 | 1 | 163 | 8 | 170 | 5.02e-25 | 100 |
MS.gene007926.t1 | MTR_5g035120 | 33.140 | 172 | 98 | 4 | 1 | 162 | 1 | 165 | 2.29e-23 | 96.7 |
MS.gene007926.t1 | MTR_2g022580 | 32.540 | 126 | 76 | 3 | 132 | 249 | 2 | 126 | 3.24e-15 | 72.4 |
MS.gene007926.t1 | MTR_3g021150 | 37.736 | 106 | 58 | 2 | 265 | 367 | 6 | 106 | 6.26e-15 | 71.2 |
MS.gene007926.t1 | MTR_5g035140 | 25.197 | 254 | 144 | 9 | 186 | 411 | 32 | 267 | 3.71e-13 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007926.t1 | AT1G73140 | 69.471 | 416 | 122 | 2 | 2 | 416 | 1 | 412 | 0.0 | 615 |
MS.gene007926.t1 | AT5G01360 | 49.587 | 363 | 176 | 2 | 54 | 409 | 16 | 378 | 9.83e-134 | 389 |
MS.gene007926.t1 | AT5G01360 | 49.587 | 363 | 176 | 2 | 54 | 409 | 72 | 434 | 3.32e-133 | 390 |
MS.gene007926.t1 | AT2G40150 | 49.861 | 361 | 166 | 3 | 60 | 409 | 64 | 420 | 3.80e-131 | 384 |
MS.gene007926.t1 | AT3G55990 | 50.432 | 347 | 167 | 2 | 69 | 410 | 138 | 484 | 1.59e-130 | 385 |
MS.gene007926.t1 | AT2G40320 | 48.711 | 349 | 174 | 2 | 66 | 410 | 76 | 423 | 1.15e-123 | 365 |
MS.gene007926.t1 | AT3G11030 | 48.571 | 350 | 174 | 4 | 66 | 410 | 101 | 449 | 2.94e-120 | 357 |
MS.gene007926.t1 | AT5G01620 | 46.398 | 347 | 177 | 4 | 68 | 409 | 107 | 449 | 1.80e-119 | 355 |
MS.gene007926.t1 | AT5G01620 | 46.398 | 347 | 177 | 4 | 68 | 409 | 107 | 449 | 1.80e-119 | 355 |
MS.gene007926.t1 | AT5G01620 | 46.398 | 347 | 177 | 4 | 68 | 409 | 115 | 457 | 2.56e-119 | 355 |
MS.gene007926.t1 | AT2G40160 | 41.608 | 423 | 230 | 5 | 4 | 409 | 1 | 423 | 4.64e-117 | 348 |
MS.gene007926.t1 | AT2G40160 | 41.509 | 424 | 231 | 5 | 4 | 410 | 1 | 424 | 5.95e-117 | 348 |
MS.gene007926.t1 | AT2G38320 | 43.868 | 424 | 204 | 8 | 1 | 413 | 8 | 408 | 7.88e-117 | 347 |
MS.gene007926.t1 | AT2G38320 | 46.483 | 327 | 164 | 5 | 96 | 413 | 1 | 325 | 9.52e-100 | 300 |
MS.gene007926.t1 | AT3G54260 | 39.710 | 345 | 187 | 7 | 71 | 412 | 51 | 377 | 1.50e-82 | 258 |
MS.gene007926.t1 | AT2G30900 | 38.040 | 347 | 185 | 10 | 71 | 410 | 43 | 366 | 1.57e-80 | 253 |
MS.gene007926.t1 | AT3G62390 | 37.500 | 360 | 193 | 11 | 64 | 410 | 132 | 472 | 3.17e-79 | 253 |
MS.gene007926.t1 | AT2G40160 | 40.514 | 311 | 169 | 4 | 4 | 298 | 1 | 311 | 5.20e-79 | 247 |
MS.gene007926.t1 | AT5G20590 | 36.441 | 354 | 199 | 9 | 70 | 410 | 140 | 480 | 9.90e-79 | 251 |
MS.gene007926.t1 | AT5G58600 | 36.599 | 347 | 202 | 6 | 71 | 410 | 66 | 401 | 3.33e-77 | 245 |
MS.gene007926.t1 | AT3G12060 | 37.079 | 356 | 197 | 8 | 69 | 410 | 194 | 536 | 5.45e-77 | 249 |
MS.gene007926.t1 | AT1G78710 | 35.465 | 344 | 194 | 9 | 71 | 410 | 38 | 357 | 5.69e-76 | 241 |
MS.gene007926.t1 | AT1G29050 | 35.262 | 363 | 205 | 8 | 50 | 409 | 43 | 378 | 6.85e-75 | 238 |
MS.gene007926.t1 | AT2G31110 | 38.304 | 342 | 184 | 8 | 71 | 409 | 45 | 362 | 2.38e-74 | 236 |
MS.gene007926.t1 | AT5G06700 | 37.110 | 353 | 199 | 10 | 69 | 409 | 253 | 594 | 1.04e-73 | 242 |
MS.gene007926.t1 | AT2G34070 | 34.278 | 353 | 204 | 7 | 61 | 409 | 55 | 383 | 1.44e-73 | 235 |
MS.gene007926.t1 | AT5G49340 | 36.915 | 363 | 186 | 10 | 71 | 410 | 100 | 442 | 2.79e-73 | 236 |
MS.gene007926.t1 | AT3G06080 | 36.975 | 357 | 199 | 8 | 70 | 411 | 102 | 447 | 1.70e-72 | 235 |
MS.gene007926.t1 | AT1G60790 | 33.938 | 386 | 216 | 12 | 52 | 411 | 162 | 534 | 6.67e-69 | 228 |
MS.gene007926.t1 | AT2G30010 | 33.867 | 375 | 208 | 10 | 56 | 410 | 43 | 397 | 8.38e-69 | 223 |
MS.gene007926.t1 | AT2G42570 | 36.919 | 344 | 188 | 8 | 71 | 410 | 47 | 365 | 9.85e-69 | 222 |
MS.gene007926.t1 | AT2G30010 | 33.867 | 375 | 208 | 10 | 56 | 410 | 86 | 440 | 1.59e-68 | 224 |
MS.gene007926.t1 | AT3G14850 | 34.582 | 347 | 201 | 8 | 69 | 411 | 32 | 356 | 2.90e-68 | 221 |
MS.gene007926.t1 | AT5G19160 | 34.239 | 368 | 208 | 10 | 70 | 417 | 98 | 451 | 4.08e-68 | 223 |
MS.gene007926.t1 | AT5G06230 | 35.150 | 367 | 206 | 9 | 67 | 414 | 17 | 370 | 9.89e-58 | 194 |
MS.gene007926.t1 | AT1G48880 | 32.113 | 355 | 199 | 13 | 71 | 411 | 115 | 441 | 1.38e-57 | 195 |
MS.gene007926.t1 | AT5G06230 | 35.150 | 367 | 206 | 9 | 67 | 414 | 58 | 411 | 2.37e-57 | 194 |
MS.gene007926.t1 | AT1G78710 | 30.294 | 340 | 164 | 8 | 71 | 410 | 31 | 297 | 4.14e-56 | 187 |
MS.gene007926.t1 | AT3G11570 | 33.913 | 345 | 183 | 12 | 93 | 414 | 103 | 425 | 2.37e-52 | 181 |
MS.gene007926.t1 | AT3G62390 | 36.842 | 247 | 142 | 7 | 64 | 300 | 132 | 374 | 1.78e-51 | 178 |
MS.gene007926.t1 | AT2G30900 | 38.496 | 226 | 124 | 7 | 71 | 290 | 43 | 259 | 3.97e-51 | 173 |
MS.gene007926.t1 | AT5G20590 | 35.833 | 240 | 141 | 5 | 70 | 298 | 140 | 377 | 7.12e-51 | 176 |
MS.gene007926.t1 | AT2G31110 | 38.222 | 225 | 128 | 4 | 71 | 292 | 45 | 261 | 1.30e-50 | 172 |
MS.gene007926.t1 | AT3G06080 | 36.402 | 239 | 141 | 4 | 70 | 298 | 102 | 339 | 2.64e-48 | 168 |
MS.gene007926.t1 | AT5G19160 | 34.728 | 239 | 145 | 4 | 70 | 298 | 98 | 335 | 4.12e-48 | 167 |
MS.gene007926.t1 | AT5G58600 | 35.931 | 231 | 137 | 4 | 71 | 297 | 66 | 289 | 6.32e-48 | 166 |
MS.gene007926.t1 | AT2G34070 | 32.353 | 272 | 157 | 6 | 142 | 409 | 1 | 249 | 4.96e-46 | 159 |
MS.gene007926.t1 | AT5G64020 | 30.518 | 367 | 212 | 13 | 71 | 409 | 57 | 408 | 6.79e-43 | 155 |
MS.gene007926.t1 | AT4G25360 | 28.180 | 401 | 223 | 15 | 58 | 417 | 156 | 532 | 7.62e-43 | 157 |
MS.gene007926.t1 | AT4G25360 | 28.180 | 401 | 223 | 15 | 58 | 417 | 156 | 532 | 7.62e-43 | 157 |
MS.gene007926.t1 | AT5G51640 | 28.460 | 383 | 224 | 13 | 64 | 415 | 131 | 494 | 1.39e-42 | 156 |
MS.gene007926.t1 | AT5G64470 | 29.201 | 363 | 220 | 15 | 71 | 414 | 55 | 399 | 2.98e-42 | 153 |
MS.gene007926.t1 | AT1G70230 | 26.912 | 353 | 228 | 11 | 71 | 411 | 79 | 413 | 5.93e-41 | 150 |
MS.gene007926.t1 | AT3G14850 | 31.752 | 274 | 162 | 7 | 142 | 411 | 1 | 253 | 1.58e-40 | 145 |
MS.gene007926.t1 | AT3G02440 | 28.531 | 354 | 218 | 11 | 71 | 405 | 127 | 464 | 2.27e-40 | 150 |
MS.gene007926.t1 | AT3G02440 | 28.531 | 354 | 218 | 11 | 71 | 405 | 135 | 472 | 2.57e-40 | 150 |
MS.gene007926.t1 | AT5G15890 | 28.042 | 378 | 229 | 10 | 50 | 405 | 162 | 518 | 4.41e-39 | 147 |
MS.gene007926.t1 | AT2G37720 | 29.787 | 376 | 191 | 16 | 71 | 409 | 143 | 482 | 2.26e-38 | 144 |
MS.gene007926.t1 | AT5G64470 | 28.726 | 369 | 220 | 17 | 71 | 414 | 55 | 405 | 2.29e-38 | 143 |
MS.gene007926.t1 | AT5G20680 | 28.534 | 382 | 192 | 14 | 69 | 409 | 116 | 457 | 3.05e-38 | 144 |
MS.gene007926.t1 | AT5G20680 | 28.534 | 382 | 192 | 14 | 69 | 409 | 192 | 533 | 7.27e-38 | 144 |
MS.gene007926.t1 | AT5G20680 | 28.534 | 382 | 192 | 14 | 69 | 409 | 210 | 551 | 7.99e-38 | 144 |
MS.gene007926.t1 | AT5G20680 | 28.534 | 382 | 192 | 14 | 69 | 409 | 210 | 551 | 7.99e-38 | 144 |
MS.gene007926.t1 | AT5G20680 | 28.534 | 382 | 192 | 14 | 69 | 409 | 210 | 551 | 7.99e-38 | 144 |
MS.gene007926.t1 | AT5G20680 | 28.534 | 382 | 192 | 14 | 69 | 409 | 210 | 551 | 7.99e-38 | 144 |
MS.gene007926.t1 | AT2G14530 | 27.989 | 368 | 213 | 12 | 71 | 409 | 62 | 406 | 8.17e-38 | 142 |
MS.gene007926.t1 | AT4G23790 | 26.711 | 453 | 244 | 21 | 6 | 405 | 6 | 423 | 1.87e-37 | 141 |
MS.gene007926.t1 | AT1G01430 | 25.750 | 400 | 261 | 11 | 34 | 410 | 62 | 448 | 5.45e-37 | 140 |
MS.gene007926.t1 | AT5G06230 | 34.538 | 249 | 142 | 6 | 67 | 297 | 58 | 303 | 1.69e-36 | 135 |
MS.gene007926.t1 | AT5G15900 | 28.255 | 361 | 223 | 11 | 69 | 409 | 65 | 409 | 1.13e-35 | 136 |
MS.gene007926.t1 | AT5G15900 | 28.255 | 361 | 223 | 11 | 69 | 409 | 84 | 428 | 1.24e-35 | 136 |
MS.gene007926.t1 | AT4G11090 | 26.075 | 372 | 227 | 13 | 62 | 405 | 70 | 421 | 4.01e-35 | 135 |
MS.gene007926.t1 | AT4G01080 | 26.503 | 366 | 224 | 13 | 63 | 405 | 83 | 426 | 8.26e-35 | 134 |
MS.gene007926.t1 | AT3G28150 | 29.223 | 373 | 208 | 16 | 66 | 409 | 65 | 410 | 2.26e-34 | 132 |
MS.gene007926.t1 | AT2G31110 | 35.345 | 232 | 124 | 7 | 181 | 409 | 6 | 214 | 1.12e-33 | 125 |
MS.gene007926.t1 | AT5G64470 | 26.908 | 249 | 161 | 10 | 71 | 303 | 55 | 298 | 1.71e-21 | 95.1 |
MS.gene007926.t1 | AT5G64470 | 26.506 | 249 | 162 | 10 | 71 | 303 | 55 | 298 | 1.73e-21 | 94.7 |
Find 102 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGCAATCAGCAAAAGATTT+TGG | 0.125911 | 8.3:+46528816 | None:intergenic |
AGAAGTGAATACAATATAAT+TGG | 0.171993 | 8.3:+46530993 | None:intergenic |
AGGATTTCATTCCATGTATC+TGG | 0.201338 | 8.3:+46528771 | None:intergenic |
GATGCTCACACCTCAGTTTA+TGG | 0.206651 | 8.3:-46528882 | MS.gene007926:CDS |
AACAAAAGAATGATGTTTAT+TGG | 0.212670 | 8.3:-46530482 | MS.gene007926:CDS |
CTGATTCTTTCTACACAAAT+TGG | 0.216029 | 8.3:-46530719 | MS.gene007926:CDS |
CAATACAAGGTTCGTCATAT+TGG | 0.230048 | 8.3:-46529013 | MS.gene007926:CDS |
TAGCTCTCTGTTCTTTAGTT+AGG | 0.246525 | 8.3:+46528841 | None:intergenic |
TGGAGGGATTTCTTTCCTTC+AGG | 0.275411 | 8.3:+46530401 | None:intergenic |
TCTTCATAGGTGGAATTCTT+TGG | 0.275642 | 8.3:+46530381 | None:intergenic |
CTGTCGTGACGTTATATTCT+TGG | 0.282711 | 8.3:+46529601 | None:intergenic |
AATACAAGGTTCGTCATATT+GGG | 0.282741 | 8.3:-46529012 | MS.gene007926:CDS |
TTGGCAAGGAGTGGACATTT+TGG | 0.310618 | 8.3:-46529889 | MS.gene007926:CDS |
GCAATGTATTTGAAGGGAAA+TGG | 0.312090 | 8.3:-46530830 | MS.gene007926:CDS |
TGCATTCACTGGTGTTTACC+TGG | 0.316704 | 8.3:-46528798 | MS.gene007926:CDS |
AACAGATCATAGACTCAAAT+TGG | 0.319491 | 8.3:+46530441 | None:intergenic |
GCTTGCTCTTCAAGCTATCT+AGG | 0.322912 | 8.3:+46530946 | None:intergenic |
ATACTACTGGGCTCCATTCA+TGG | 0.353905 | 8.3:-46529997 | MS.gene007926:CDS |
TCAACTTTAAATATCTTCAT+AGG | 0.360087 | 8.3:+46530368 | None:intergenic |
ATATAATTGGGAAAATTGAT+TGG | 0.370417 | 8.3:+46531006 | None:intergenic |
CAATGTATTTGAAGGGAAAT+GGG | 0.374415 | 8.3:-46530829 | MS.gene007926:CDS |
CAGCTCTACGGCATGTCATC+TGG | 0.379386 | 8.3:-46530909 | MS.gene007926:CDS |
TTATATTCTTGGACTTCATC+TGG | 0.380050 | 8.3:+46529612 | None:intergenic |
TAACTTACCACAAATGTGTT+GGG | 0.386349 | 8.3:+46529490 | None:intergenic |
ATGCATCGATTGAATACTAC+TGG | 0.392477 | 8.3:-46530010 | MS.gene007926:CDS |
ATTTGAGTCTATGATCTGTT+TGG | 0.397442 | 8.3:-46530438 | MS.gene007926:CDS |
ATAATTGGGTGATGTTCAAT+AGG | 0.397627 | 8.3:+46528919 | None:intergenic |
CAATATGACGAACCTTGTAT+TGG | 0.400765 | 8.3:+46529014 | None:intergenic |
GTGGTCTGCTTGACCAAGTA+AGG | 0.408960 | 8.3:+46530762 | None:intergenic |
AGAAGTGAGTTGCCCTTACT+TGG | 0.416247 | 8.3:-46530775 | MS.gene007926:CDS |
TGGTGGAAGGAATCGATTAC+CGG | 0.428048 | 8.3:-46530889 | MS.gene007926:CDS |
CAAATCATACGGTACATAAA+CGG | 0.437106 | 8.3:-46529950 | MS.gene007926:CDS |
CAATTTGTGTAGAAAGAATC+AGG | 0.437639 | 8.3:+46530720 | None:intergenic |
ATTACCGGTTGTTGTGTTGC+CGG | 0.437991 | 8.3:-46530874 | MS.gene007926:CDS |
TCTTAAACAGATATGCATAT+AGG | 0.438576 | 8.3:+46528751 | None:intergenic |
GAAGTGAATACAATATAATT+GGG | 0.442470 | 8.3:+46530994 | None:intergenic |
GAAATTGATTCAACCATGAA+TGG | 0.451055 | 8.3:+46529984 | None:intergenic |
TTGGGAAAATTGATTGGATC+CGG | 0.452959 | 8.3:+46531012 | None:intergenic |
AATATGACGAACCTTGTATT+GGG | 0.455104 | 8.3:+46529015 | None:intergenic |
CCCTCCTCAATGCGATCCTC+CGG | 0.457796 | 8.3:+46530855 | None:intergenic |
TATTTGAAGGGAAATGGGTA+TGG | 0.465084 | 8.3:-46530824 | MS.gene007926:CDS |
TTCTAATCTTTGCAGTTACA+AGG | 0.466052 | 8.3:-46530974 | MS.gene007926:CDS |
CAGACCACTTGCATGAAGAA+TGG | 0.466368 | 8.3:-46530747 | MS.gene007926:CDS |
TCCTCCGGCAACACAACAAC+CGG | 0.467189 | 8.3:+46530870 | None:intergenic |
GAGGGTTGCAATGTATTTGA+AGG | 0.469336 | 8.3:-46530837 | MS.gene007926:CDS |
GCATTCACTGGTGTTTACCT+GGG | 0.470418 | 8.3:-46528797 | MS.gene007926:CDS |
CTCACGTAGCATTGATGAAA+GGG | 0.471007 | 8.3:+46529835 | None:intergenic |
AGACCACTTGCATGAAGAAT+GGG | 0.475855 | 8.3:-46530746 | MS.gene007926:CDS |
AGGAGCTGGGAATGGAAGCC+AGG | 0.483811 | 8.3:-46529068 | MS.gene007926:CDS |
CATAGGTGGAATTCTTTGGA+GGG | 0.491727 | 8.3:+46530385 | None:intergenic |
CTCAGTTTATGGCGAGCGAA+AGG | 0.496603 | 8.3:-46528871 | MS.gene007926:CDS |
ATTCTTTCTACACAAATTGG+AGG | 0.504866 | 8.3:-46530716 | MS.gene007926:CDS |
GTATGTCCCCAACACATTTG+TGG | 0.505067 | 8.3:-46529497 | MS.gene007926:intron |
GCCGGAGGATCGCATTGAGG+AGG | 0.515226 | 8.3:-46530856 | MS.gene007926:CDS |
TCTTCTCCAGGAGCTGGGAA+TGG | 0.516727 | 8.3:-46529076 | MS.gene007926:intron |
CAACTCACTTCTTCATAAAG+AGG | 0.520659 | 8.3:+46530786 | None:intergenic |
TCATAGGTGGAATTCTTTGG+AGG | 0.523486 | 8.3:+46530384 | None:intergenic |
GGATTTCATTCCATGTATCT+GGG | 0.524709 | 8.3:+46528772 | None:intergenic |
GTAACTTACCACAAATGTGT+TGG | 0.530098 | 8.3:+46529489 | None:intergenic |
TACCTGGGGTCCCAGATACA+TGG | 0.530934 | 8.3:-46528782 | MS.gene007926:CDS |
AATTGGAGGTGGCAGCCTCA+TGG | 0.531507 | 8.3:-46530702 | MS.gene007926:CDS |
TTCCATGTATCTGGGACCCC+AGG | 0.534611 | 8.3:+46528780 | None:intergenic |
GGTTCGTCATATTGGGGCAC+AGG | 0.534995 | 8.3:-46529005 | MS.gene007926:CDS |
TCAGTTTATGGCGAGCGAAA+GGG | 0.538195 | 8.3:-46528870 | MS.gene007926:CDS |
TGTTCGAGAGCTATGTTTGG+TGG | 0.543784 | 8.3:-46529866 | MS.gene007926:CDS |
CATTCACTGGTGTTTACCTG+GGG | 0.545869 | 8.3:-46528796 | MS.gene007926:CDS |
TGGTGTTCGAGAGCTATGTT+TGG | 0.547200 | 8.3:-46529869 | MS.gene007926:CDS |
CTTTCTACACAAATTGGAGG+TGG | 0.550918 | 8.3:-46530713 | MS.gene007926:CDS |
GTACAATCTGTAATTCCTGA+AGG | 0.559209 | 8.3:-46530416 | MS.gene007926:CDS |
TCTCCCATTCTTCATGCAAG+TGG | 0.561570 | 8.3:+46530743 | None:intergenic |
TATGAAGATATTTAAAGTTG+AGG | 0.563429 | 8.3:-46530366 | MS.gene007926:intron |
TAATTGGGTGATGTTCAATA+GGG | 0.568867 | 8.3:+46528920 | None:intergenic |
CCGGAGGATCGCATTGAGGA+GGG | 0.569780 | 8.3:-46530855 | MS.gene007926:CDS |
ACTCACGTAGCATTGATGAA+AGG | 0.570089 | 8.3:+46529834 | None:intergenic |
AACATGTGCAACAACTTCAA+AGG | 0.571932 | 8.3:+46530509 | None:intergenic |
TAGCTAAGCATGGCAAACAT+TGG | 0.579693 | 8.3:-46529908 | MS.gene007926:CDS |
ATTTGAAGGGAAATGGGTAT+GGG | 0.582984 | 8.3:-46530823 | MS.gene007926:CDS |
TGAAGTTGTTGCACATGTTG+AGG | 0.585215 | 8.3:-46530505 | MS.gene007926:CDS |
CTCATGGATGCAACCTCCCA+AGG | 0.585468 | 8.3:-46530686 | MS.gene007926:intron |
CGTCACGACAGCATATAAGT+TGG | 0.586816 | 8.3:-46529589 | MS.gene007926:CDS |
AGGGTTGCAATGTATTTGAA+GGG | 0.588210 | 8.3:-46530836 | MS.gene007926:CDS |
TCAAGTCTTCGATTGATCGC+CGG | 0.588728 | 8.3:-46531031 | MS.gene007926:CDS |
ACTTTAAATATCTTCATAGG+TGG | 0.594287 | 8.3:+46530371 | None:intergenic |
TGATCATGCAACAAATCATA+CGG | 0.594915 | 8.3:-46529961 | MS.gene007926:CDS |
AACTTACCACAAATGTGTTG+GGG | 0.596950 | 8.3:+46529491 | None:intergenic |
ACCGGTTGTTGTGTTGCCGG+AGG | 0.598806 | 8.3:-46530871 | MS.gene007926:CDS |
TGGCAAACATTGGCAAGGAG+TGG | 0.599503 | 8.3:-46529898 | MS.gene007926:CDS |
ATTGGAGACTCATTACAAAG+AGG | 0.601036 | 8.3:-46530464 | MS.gene007926:CDS |
ACGGCATGTCATCTGGTGGA+AGG | 0.604816 | 8.3:-46530902 | MS.gene007926:CDS |
CACTTCTTCATAAAGAGGAT+AGG | 0.612582 | 8.3:+46530791 | None:intergenic |
CTTGACTCAATAGCTAAGCA+TGG | 0.612907 | 8.3:-46529918 | MS.gene007926:CDS |
CTCTACGGCATGTCATCTGG+TGG | 0.613992 | 8.3:-46530906 | MS.gene007926:CDS |
GTTGCCGGAGGATCGCATTG+AGG | 0.623555 | 8.3:-46530859 | MS.gene007926:CDS |
TCATACGGTACATAAACGGA+TGG | 0.623999 | 8.3:-46529946 | MS.gene007926:CDS |
AATGAATCATACCCAATACA+AGG | 0.626400 | 8.3:-46529026 | MS.gene007926:CDS |
AAAGTGTTGGCTACCTTGGG+AGG | 0.628073 | 8.3:+46530673 | None:intergenic |
CTTGGGAGGTTGCATCCATG+AGG | 0.629461 | 8.3:+46530687 | None:intergenic |
TGCATCGATTGAATACTACT+GGG | 0.637341 | 8.3:-46530009 | MS.gene007926:CDS |
AAGCATGGCAAACATTGGCA+AGG | 0.639024 | 8.3:-46529903 | MS.gene007926:CDS |
TGGTCTGCTTGACCAAGTAA+GGG | 0.642359 | 8.3:+46530763 | None:intergenic |
ATACAAGGTTCGTCATATTG+GGG | 0.647384 | 8.3:-46529011 | MS.gene007926:CDS |
CTTTCGCTCGCCATAAACTG+AGG | 0.649074 | 8.3:+46528872 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATAACTCTAGTTATTATT+AGG | + | chr8.3:46530472-46530491 | None:intergenic | 15.0% |
!!! | AAATTCGATTTTTTATTTTC+TGG | - | chr8.3:46530633-46530652 | MS.gene007926:intron | 15.0% |
!!! | ATTTTTTTTAAGTTCACAAT+CGG | + | chr8.3:46529162-46529181 | None:intergenic | 15.0% |
!! | AACAAAAGAATGATGTTTAT+TGG | - | chr8.3:46529290-46529309 | MS.gene007926:intron | 20.0% |
!! | AATCAGACAAATTATTGAAT+TGG | - | chr8.3:46530105-46530124 | MS.gene007926:intron | 20.0% |
!! | AGAAGTGAATACAATATAAT+TGG | + | chr8.3:46528782-46528801 | None:intergenic | 20.0% |
!! | ATATAATTGGGAAAATTGAT+TGG | + | chr8.3:46528769-46528788 | None:intergenic | 20.0% |
!! | GAAGTGAATACAATATAATT+GGG | + | chr8.3:46528781-46528800 | None:intergenic | 20.0% |
!! | TCAACTTTAAATATCTTCAT+AGG | + | chr8.3:46529407-46529426 | None:intergenic | 20.0% |
!! | TTAAGTTATTTATGAAAGCA+TGG | + | chr8.3:46529475-46529494 | None:intergenic | 20.0% |
!!! | AAAAATACATTTTGAGTAAG+TGG | + | chr8.3:46530250-46530269 | None:intergenic | 20.0% |
!!! | ATTATCAAGTTTTGCTAATA+AGG | - | chr8.3:46530342-46530361 | MS.gene007926:intron | 20.0% |
!!! | TATGAAGATATTTAAAGTTG+AGG | - | chr8.3:46529406-46529425 | MS.gene007926:intron | 20.0% |
! | ACTTTAAATATCTTCATAGG+TGG | + | chr8.3:46529404-46529423 | None:intergenic | 25.0% |
! | GAAGAGAGATGTTAATTATT+AGG | + | chr8.3:46530553-46530572 | None:intergenic | 25.0% |
! | GACATAAATATTTGTGAGAT+TGG | + | chr8.3:46529590-46529609 | None:intergenic | 25.0% |
! | TCTTAAACAGATATGCATAT+AGG | + | chr8.3:46531024-46531043 | None:intergenic | 25.0% |
!! | TTTTCTGTACTCTGATAATT+GGG | + | chr8.3:46530870-46530889 | None:intergenic | 25.0% |
!!! | AAATTCCTATAGCTTTGTTT+TGG | - | chr8.3:46529729-46529748 | MS.gene007926:intron | 25.0% |
!!! | AAGAATTTATTTTCTTCTCC+AGG | - | chr8.3:46530684-46530703 | MS.gene007926:intron | 25.0% |
AAACATTCACCAAATCATGT+GGG | + | chr8.3:46530428-46530447 | None:intergenic | 30.0% | |
AACAGATCATAGACTCAAAT+TGG | + | chr8.3:46529334-46529353 | None:intergenic | 30.0% | |
AATACAAGGTTCGTCATATT+GGG | - | chr8.3:46530760-46530779 | MS.gene007926:CDS | 30.0% | |
AATATGACGAACCTTGTATT+GGG | + | chr8.3:46530760-46530779 | None:intergenic | 30.0% | |
AATGAATCATACCCAATACA+AGG | - | chr8.3:46530746-46530765 | MS.gene007926:CDS | 30.0% | |
AGTACTTGAATGAATGTTCA+TGG | - | chr8.3:46530000-46530019 | MS.gene007926:CDS | 30.0% | |
ATAATTGGGTGATGTTCAAT+AGG | + | chr8.3:46530856-46530875 | None:intergenic | 30.0% | |
ATTCTTTCTACACAAATTGG+AGG | - | chr8.3:46529056-46529075 | MS.gene007926:CDS | 30.0% | |
ATTTGAGTCTATGATCTGTT+TGG | - | chr8.3:46529334-46529353 | MS.gene007926:intron | 30.0% | |
CAAATCATACGGTACATAAA+CGG | - | chr8.3:46529822-46529841 | MS.gene007926:intron | 30.0% | |
CAATGTATTTGAAGGGAAAT+GGG | - | chr8.3:46528943-46528962 | MS.gene007926:CDS | 30.0% | |
CAATTTGTGTAGAAAGAATC+AGG | + | chr8.3:46529055-46529074 | None:intergenic | 30.0% | |
CTGATTCTTTCTACACAAAT+TGG | - | chr8.3:46529053-46529072 | MS.gene007926:CDS | 30.0% | |
TAACTTACCACAAATGTGTT+GGG | + | chr8.3:46530285-46530304 | None:intergenic | 30.0% | |
TAATTGGGTGATGTTCAATA+GGG | + | chr8.3:46530855-46530874 | None:intergenic | 30.0% | |
TGATCATGCAACAAATCATA+CGG | - | chr8.3:46529811-46529830 | MS.gene007926:intron | 30.0% | |
TTATATTCTTGGACTTCATC+TGG | + | chr8.3:46530163-46530182 | None:intergenic | 30.0% | |
TTCTAATCTTTGCAGTTACA+AGG | - | chr8.3:46528798-46528817 | MS.gene007926:CDS | 30.0% | |
! | ATAAGTTGGCGTTAAAAACA+TGG | - | chr8.3:46530197-46530216 | MS.gene007926:intron | 30.0% |
! | ATGCAATCAGCAAAAGATTT+TGG | + | chr8.3:46530959-46530978 | None:intergenic | 30.0% |
! | CTTTTCTGTACTCTGATAAT+TGG | + | chr8.3:46530871-46530890 | None:intergenic | 30.0% |
! | GAAATTGATTCAACCATGAA+TGG | + | chr8.3:46529791-46529810 | None:intergenic | 30.0% |
! | GTTAAAATCTGGAAAAGTGT+TGG | + | chr8.3:46529115-46529134 | None:intergenic | 30.0% |
! | GTTGTGTAAAAAGCACAAAA+TGG | - | chr8.3:46530035-46530054 | MS.gene007926:intron | 30.0% |
! | TAAGTTGGCGTTAAAAACAT+GGG | - | chr8.3:46530198-46530217 | MS.gene007926:intron | 30.0% |
! | TGCAATCAGCAAAAGATTTT+GGG | + | chr8.3:46530958-46530977 | None:intergenic | 30.0% |
!! | AACATGTTTTGTTCCAGATA+TGG | - | chr8.3:46530133-46530152 | MS.gene007926:intron | 30.0% |
!! | ATACATTTTGAGTAAGTGGT+TGG | + | chr8.3:46530246-46530265 | None:intergenic | 30.0% |
!! | TGTGCTTTTTACACAACTAT+AGG | + | chr8.3:46530032-46530051 | None:intergenic | 30.0% |
AACATGTGCAACAACTTCAA+AGG | + | chr8.3:46529266-46529285 | None:intergenic | 35.0% | |
AACTTACCACAAATGTGTTG+GGG | + | chr8.3:46530284-46530303 | None:intergenic | 35.0% | |
AGGATTTCATTCCATGTATC+TGG | + | chr8.3:46531004-46531023 | None:intergenic | 35.0% | |
AGGGTTGCAATGTATTTGAA+GGG | - | chr8.3:46528936-46528955 | MS.gene007926:CDS | 35.0% | |
ATACAAGGTTCGTCATATTG+GGG | - | chr8.3:46530761-46530780 | MS.gene007926:CDS | 35.0% | |
ATCAAGGCGAAGTTAAAATC+TGG | + | chr8.3:46529126-46529145 | None:intergenic | 35.0% | |
ATTGGAGACTCATTACAAAG+AGG | - | chr8.3:46529308-46529327 | MS.gene007926:intron | 35.0% | |
ATTTGAAGGGAAATGGGTAT+GGG | - | chr8.3:46528949-46528968 | MS.gene007926:CDS | 35.0% | |
CAAACATTCACCAAATCATG+TGG | + | chr8.3:46530429-46530448 | None:intergenic | 35.0% | |
CAACTCACTTCTTCATAAAG+AGG | + | chr8.3:46528989-46529008 | None:intergenic | 35.0% | |
CAATACAAGGTTCGTCATAT+TGG | - | chr8.3:46530759-46530778 | MS.gene007926:CDS | 35.0% | |
CAATATGACGAACCTTGTAT+TGG | + | chr8.3:46530761-46530780 | None:intergenic | 35.0% | |
CACTTCTTCATAAAGAGGAT+AGG | + | chr8.3:46528984-46529003 | None:intergenic | 35.0% | |
CGTTAAAAACATGGGCAAAT+TGG | - | chr8.3:46530206-46530225 | MS.gene007926:intron | 35.0% | |
GCAATGTATTTGAAGGGAAA+TGG | - | chr8.3:46528942-46528961 | MS.gene007926:CDS | 35.0% | |
GCAGAGTCACTCTTTAAATT+TGG | + | chr8.3:46530388-46530407 | None:intergenic | 35.0% | |
GGATTTCATTCCATGTATCT+GGG | + | chr8.3:46531003-46531022 | None:intergenic | 35.0% | |
GTAACTTACCACAAATGTGT+TGG | + | chr8.3:46530286-46530305 | None:intergenic | 35.0% | |
GTACAATCTGTAATTCCTGA+AGG | - | chr8.3:46529356-46529375 | MS.gene007926:intron | 35.0% | |
GTGAGTATATCTATAGACCT+TGG | - | chr8.3:46529955-46529974 | MS.gene007926:CDS | 35.0% | |
TAGCTCTCTGTTCTTTAGTT+AGG | + | chr8.3:46530934-46530953 | None:intergenic | 35.0% | |
TATTTGAAGGGAAATGGGTA+TGG | - | chr8.3:46528948-46528967 | MS.gene007926:CDS | 35.0% | |
TCTTCATAGGTGGAATTCTT+TGG | + | chr8.3:46529394-46529413 | None:intergenic | 35.0% | |
TTGGGAAAATTGATTGGATC+CGG | + | chr8.3:46528763-46528782 | None:intergenic | 35.0% | |
! | CTGAAGTCAAGAAAAGCATA+AGG | + | chr8.3:46529236-46529255 | None:intergenic | 35.0% |
! | CTTATGCTTTTCTTGACTTC+AGG | - | chr8.3:46529234-46529253 | MS.gene007926:intron | 35.0% |
!! | ATGCATCGATTGAATACTAC+TGG | - | chr8.3:46529762-46529781 | MS.gene007926:intron | 35.0% |
!! | TGCATCGATTGAATACTACT+GGG | - | chr8.3:46529763-46529782 | MS.gene007926:intron | 35.0% |
AAAGTGAAGCCCACATGATT+TGG | - | chr8.3:46530416-46530435 | MS.gene007926:CDS | 40.0% | |
ACTTCGCCTTGATTACTCTT+AGG | - | chr8.3:46529133-46529152 | MS.gene007926:intron | 40.0% | |
AGACCACTTGCATGAAGAAT+GGG | - | chr8.3:46529026-46529045 | MS.gene007926:CDS | 40.0% | |
CATAGGTGGAATTCTTTGGA+GGG | + | chr8.3:46529390-46529409 | None:intergenic | 40.0% | |
CGGAAACCTAAGAGTAATCA+AGG | + | chr8.3:46529142-46529161 | None:intergenic | 40.0% | |
CTGTCGTGACGTTATATTCT+TGG | + | chr8.3:46530174-46530193 | None:intergenic | 40.0% | |
CTTGACTCAATAGCTAAGCA+TGG | - | chr8.3:46529854-46529873 | MS.gene007926:CDS | 40.0% | |
CTTTCTACACAAATTGGAGG+TGG | - | chr8.3:46529059-46529078 | MS.gene007926:CDS | 40.0% | |
GAGGGTTGCAATGTATTTGA+AGG | - | chr8.3:46528935-46528954 | MS.gene007926:CDS | 40.0% | |
GTATATCTATAGACCTTGGC+TGG | - | chr8.3:46529959-46529978 | MS.gene007926:CDS | 40.0% | |
TAGCTAAGCATGGCAAACAT+TGG | - | chr8.3:46529864-46529883 | MS.gene007926:CDS | 40.0% | |
TCATACGGTACATAAACGGA+TGG | - | chr8.3:46529826-46529845 | MS.gene007926:intron | 40.0% | |
TCATAGGTGGAATTCTTTGG+AGG | + | chr8.3:46529391-46529410 | None:intergenic | 40.0% | |
TCCTGCCAAAACAAAGCTAT+AGG | + | chr8.3:46529737-46529756 | None:intergenic | 40.0% | |
TGAAGTTGTTGCACATGTTG+AGG | - | chr8.3:46529267-46529286 | MS.gene007926:intron | 40.0% | |
TTCATCTGGTGATCCATATC+TGG | + | chr8.3:46530149-46530168 | None:intergenic | 40.0% | |
! | TATTTTCTTCTCCAGGAGCT+GGG | - | chr8.3:46530691-46530710 | MS.gene007926:CDS | 40.0% |
! | TTATTTTCTTCTCCAGGAGC+TGG | - | chr8.3:46530690-46530709 | MS.gene007926:CDS | 40.0% |
!! | ACTCACGTAGCATTGATGAA+AGG | + | chr8.3:46529941-46529960 | None:intergenic | 40.0% |
!! | AGCCATGTTTTTCAGCTCTA+CGG | - | chr8.3:46528851-46528870 | MS.gene007926:CDS | 40.0% |
!! | CAAGTACTGAACTATGCTCA+CGG | + | chr8.3:46529988-46530007 | None:intergenic | 40.0% |
!! | CTCACGTAGCATTGATGAAA+GGG | + | chr8.3:46529940-46529959 | None:intergenic | 40.0% |
!! | CTTTTGCTGATTGCATTCAC+TGG | - | chr8.3:46530963-46530982 | MS.gene007926:CDS | 40.0% |
!!! | TCCTATAGCTTTGTTTTGGC+AGG | - | chr8.3:46529733-46529752 | MS.gene007926:intron | 40.0% |
AAGCATGGCAAACATTGGCA+AGG | - | chr8.3:46529869-46529888 | MS.gene007926:CDS | 45.0% | |
AGAAGTGAGTTGCCCTTACT+TGG | - | chr8.3:46528997-46529016 | MS.gene007926:CDS | 45.0% | |
ATACTACTGGGCTCCATTCA+TGG | - | chr8.3:46529775-46529794 | MS.gene007926:intron | 45.0% | |
CAGACCACTTGCATGAAGAA+TGG | - | chr8.3:46529025-46529044 | MS.gene007926:CDS | 45.0% | |
CATTCACTGGTGTTTACCTG+GGG | - | chr8.3:46530976-46530995 | MS.gene007926:CDS | 45.0% | |
CGTCACGACAGCATATAAGT+TGG | - | chr8.3:46530183-46530202 | MS.gene007926:intron | 45.0% | |
GATGCTCACACCTCAGTTTA+TGG | - | chr8.3:46530890-46530909 | MS.gene007926:CDS | 45.0% | |
GCATTCACTGGTGTTTACCT+GGG | - | chr8.3:46530975-46530994 | MS.gene007926:CDS | 45.0% | |
GCTTGCTCTTCAAGCTATCT+AGG | + | chr8.3:46528829-46528848 | None:intergenic | 45.0% | |
GTATGTCCCCAACACATTTG+TGG | - | chr8.3:46530275-46530294 | MS.gene007926:intron | 45.0% | |
TCAAGTCTTCGATTGATCGC+CGG | - | chr8.3:46528741-46528760 | MS.gene007926:CDS | 45.0% | |
TCAGTTTATGGCGAGCGAAA+GGG | - | chr8.3:46530902-46530921 | MS.gene007926:CDS | 45.0% | |
TCTCCCATTCTTCATGCAAG+TGG | + | chr8.3:46529032-46529051 | None:intergenic | 45.0% | |
TGCATTCACTGGTGTTTACC+TGG | - | chr8.3:46530974-46530993 | MS.gene007926:CDS | 45.0% | |
TGCCGTAGAGCTGAAAAACA+TGG | + | chr8.3:46528856-46528875 | None:intergenic | 45.0% | |
TGGAGGGATTTCTTTCCTTC+AGG | + | chr8.3:46529374-46529393 | None:intergenic | 45.0% | |
TGGTCTGCTTGACCAAGTAA+GGG | + | chr8.3:46529012-46529031 | None:intergenic | 45.0% | |
TGGTGGAAGGAATCGATTAC+CGG | - | chr8.3:46528883-46528902 | MS.gene007926:CDS | 45.0% | |
TGGTGTTCGAGAGCTATGTT+TGG | - | chr8.3:46529903-46529922 | MS.gene007926:CDS | 45.0% | |
TGTTCGAGAGCTATGTTTGG+TGG | - | chr8.3:46529906-46529925 | MS.gene007926:CDS | 45.0% | |
! | AAGCAGTTTTCGTCACTTCC+TGG | + | chr8.3:46530725-46530744 | None:intergenic | 45.0% |
! | ATTACCGGTTGTTGTGTTGC+CGG | - | chr8.3:46528898-46528917 | MS.gene007926:CDS | 45.0% |
! | TTGGCAAGGAGTGGACATTT+TGG | - | chr8.3:46529883-46529902 | MS.gene007926:CDS | 45.0% |
!! | GGAAAAGTGTTGGCTACCTT+GGG | + | chr8.3:46529105-46529124 | None:intergenic | 45.0% |
!! | TGGAAAAGTGTTGGCTACCT+TGG | + | chr8.3:46529106-46529125 | None:intergenic | 45.0% |
CTCAGTTTATGGCGAGCGAA+AGG | - | chr8.3:46530901-46530920 | MS.gene007926:CDS | 50.0% | |
CTTTCGCTCGCCATAAACTG+AGG | + | chr8.3:46530903-46530922 | None:intergenic | 50.0% | |
GTGGTCTGCTTGACCAAGTA+AGG | + | chr8.3:46529013-46529032 | None:intergenic | 50.0% | |
TGGCAAACATTGGCAAGGAG+TGG | - | chr8.3:46529874-46529893 | MS.gene007926:CDS | 50.0% | |
!! | AAAGTGTTGGCTACCTTGGG+AGG | + | chr8.3:46529102-46529121 | None:intergenic | 50.0% |
AATTGGAGGTGGCAGCCTCA+TGG | - | chr8.3:46529070-46529089 | MS.gene007926:intron | 55.0% | |
ACGGCATGTCATCTGGTGGA+AGG | - | chr8.3:46528870-46528889 | MS.gene007926:CDS | 55.0% | |
CAGCTCTACGGCATGTCATC+TGG | - | chr8.3:46528863-46528882 | MS.gene007926:CDS | 55.0% | |
CTCATGGATGCAACCTCCCA+AGG | - | chr8.3:46529086-46529105 | MS.gene007926:intron | 55.0% | |
CTCTACGGCATGTCATCTGG+TGG | - | chr8.3:46528866-46528885 | MS.gene007926:CDS | 55.0% | |
CTTGGGAGGTTGCATCCATG+AGG | + | chr8.3:46529088-46529107 | None:intergenic | 55.0% | |
GGTTCGTCATATTGGGGCAC+AGG | - | chr8.3:46530767-46530786 | MS.gene007926:CDS | 55.0% | |
TACCTGGGGTCCCAGATACA+TGG | - | chr8.3:46530990-46531009 | MS.gene007926:CDS | 55.0% | |
TCCTCCGGCAACACAACAAC+CGG | + | chr8.3:46528905-46528924 | None:intergenic | 55.0% | |
TCTTCTCCAGGAGCTGGGAA+TGG | - | chr8.3:46530696-46530715 | MS.gene007926:CDS | 55.0% | |
! | TTCCATGTATCTGGGACCCC+AGG | + | chr8.3:46530995-46531014 | None:intergenic | 55.0% |
ACCGGTTGTTGTGTTGCCGG+AGG | - | chr8.3:46528901-46528920 | MS.gene007926:CDS | 60.0% | |
AGGAGCTGGGAATGGAAGCC+AGG | - | chr8.3:46530704-46530723 | MS.gene007926:CDS | 60.0% | |
ATGCTCACGGAGACCAGCCA+AGG | + | chr8.3:46529975-46529994 | None:intergenic | 60.0% | |
CCCTCCTCAATGCGATCCTC+CGG | + | chr8.3:46528920-46528939 | None:intergenic | 60.0% | |
CCGGAGGATCGCATTGAGGA+GGG | - | chr8.3:46528917-46528936 | MS.gene007926:CDS | 60.0% | |
GTTGCCGGAGGATCGCATTG+AGG | - | chr8.3:46528913-46528932 | MS.gene007926:CDS | 60.0% | |
TGGCTTCCATTCCCAGCTCC+TGG | + | chr8.3:46530705-46530724 | None:intergenic | 60.0% | |
GCCGGAGGATCGCATTGAGG+AGG | - | chr8.3:46528916-46528935 | MS.gene007926:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 46528731 | 46531063 | 46528731 | ID=MS.gene007926 |
chr8.3 | mRNA | 46528731 | 46531063 | 46528731 | ID=MS.gene007926.t1;Parent=MS.gene007926 |
chr8.3 | exon | 46530687 | 46531063 | 46530687 | ID=MS.gene007926.t1.exon1;Parent=MS.gene007926.t1 |
chr8.3 | CDS | 46530687 | 46531063 | 46530687 | ID=cds.MS.gene007926.t1;Parent=MS.gene007926.t1 |
chr8.3 | exon | 46530367 | 46530538 | 46530367 | ID=MS.gene007926.t1.exon2;Parent=MS.gene007926.t1 |
chr8.3 | CDS | 46530367 | 46530538 | 46530367 | ID=cds.MS.gene007926.t1;Parent=MS.gene007926.t1 |
chr8.3 | exon | 46529840 | 46530039 | 46529840 | ID=MS.gene007926.t1.exon3;Parent=MS.gene007926.t1 |
chr8.3 | CDS | 46529840 | 46530039 | 46529840 | ID=cds.MS.gene007926.t1;Parent=MS.gene007926.t1 |
chr8.3 | exon | 46529498 | 46529644 | 46529498 | ID=MS.gene007926.t1.exon4;Parent=MS.gene007926.t1 |
chr8.3 | CDS | 46529498 | 46529644 | 46529498 | ID=cds.MS.gene007926.t1;Parent=MS.gene007926.t1 |
chr8.3 | exon | 46528731 | 46529088 | 46528731 | ID=MS.gene007926.t1.exon5;Parent=MS.gene007926.t1 |
chr8.3 | CDS | 46528731 | 46529088 | 46528731 | ID=cds.MS.gene007926.t1;Parent=MS.gene007926.t1 |
Gene Sequence |
Protein sequence |