AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene008102

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008102.t1 MTR_3g069780 96.496 371 13 0 1 371 1 371 0.0 739
MS.gene008102.t1 MTR_3g438030 95.418 371 17 0 1 371 1 371 0.0 733
MS.gene008102.t1 MTR_3g069520 85.523 373 48 3 1 371 1 369 0.0 642
MS.gene008102.t1 MTR_3g448360 80.965 373 67 3 1 371 1 371 0.0 614
MS.gene008102.t1 MTR_2g079090 68.449 374 100 7 1 371 1 359 5.39e-179 501
MS.gene008102.t1 MTR_0029s0050 68.449 374 100 7 1 371 1 359 1.41e-177 498
MS.gene008102.t1 MTR_3g463960 64.175 388 121 5 1 371 2 388 2.12e-177 498
MS.gene008102.t1 MTR_3g463950 64.175 388 121 5 1 371 2 388 2.12e-177 498
MS.gene008102.t1 MTR_3g463970 64.175 388 121 5 1 371 2 388 2.12e-177 498
MS.gene008102.t1 MTR_3g463940 64.175 388 121 5 1 371 2 388 2.12e-177 498
MS.gene008102.t1 MTR_2g079080 67.647 374 103 7 1 371 1 359 1.14e-176 495
MS.gene008102.t1 MTR_0029s0100 67.914 374 102 7 1 371 1 359 2.23e-175 492
MS.gene008102.t1 MTR_3g463930 61.869 396 124 7 1 371 2 395 3.98e-168 475
MS.gene008102.t1 MTR_2g043980 58.933 375 130 7 1 371 7 361 1.63e-151 431
MS.gene008102.t1 MTR_2g015650 51.882 372 171 5 5 371 6 374 6.79e-129 375
MS.gene008102.t1 MTR_2g015670 49.861 361 161 7 15 371 16 360 2.14e-115 340
MS.gene008102.t1 MTR_2g015630 46.221 344 169 7 35 368 36 373 3.22e-101 305
MS.gene008102.t1 MTR_2g015580 44.767 344 178 4 28 364 45 383 5.32e-100 302
MS.gene008102.t1 MTR_2g043990 52.027 296 111 6 1 292 69 337 1.46e-95 288
MS.gene008102.t1 MTR_2g015590 43.567 342 180 7 28 361 29 365 1.38e-91 280
MS.gene008102.t1 MTR_3g466240 57.466 221 61 3 104 319 2 194 8.34e-77 235
MS.gene008102.t1 MTR_4g104240 38.040 347 188 12 27 361 36 367 1.19e-70 226
MS.gene008102.t1 MTR_2g015590 43.956 273 144 5 28 293 29 299 4.08e-67 216
MS.gene008102.t1 MTR_3g466190 66.867 166 36 3 58 223 7 153 3.31e-65 207
MS.gene008102.t1 MTR_3g466190 79.487 78 16 0 294 371 152 229 4.88e-38 136
MS.gene008102.t1 MTR_8g028160 33.687 377 216 15 6 361 11 374 1.52e-51 176
MS.gene008102.t1 MTR_7g087190 32.454 379 212 14 18 371 31 390 2.89e-51 176
MS.gene008102.t1 MTR_7g116870 33.889 360 202 13 28 369 31 372 2.13e-49 171
MS.gene008102.t1 MTR_7g111780 33.430 344 198 13 30 363 36 358 1.20e-47 166
MS.gene008102.t1 MTR_1g030340 32.746 397 210 15 4 371 18 386 1.69e-47 166
MS.gene008102.t1 MTR_1g030220 33.333 357 203 11 28 364 38 379 3.23e-47 165
MS.gene008102.t1 MTR_7g113860 33.333 363 194 15 26 361 25 366 1.09e-46 163
MS.gene008102.t1 MTR_1g030268 34.078 358 197 14 28 364 38 377 3.94e-46 162
MS.gene008102.t1 MTR_7g113860 30.729 384 222 15 2 361 9 372 5.44e-46 162
MS.gene008102.t1 MTR_8g089805 32.312 359 205 12 28 363 38 381 5.71e-46 162
MS.gene008102.t1 MTR_1g030230 33.967 368 200 14 20 363 22 370 1.14e-44 158
MS.gene008102.t1 MTR_7g033165 31.856 361 200 11 28 362 31 371 2.54e-43 154
MS.gene008102.t1 MTR_7g033155 32.642 386 193 15 22 363 30 392 6.33e-43 154
MS.gene008102.t1 MTR_7g033150 32.011 378 205 14 20 366 25 381 2.31e-42 152
MS.gene008102.t1 MTR_6g007090 32.676 355 213 11 20 361 29 370 7.91e-42 150
MS.gene008102.t1 MTR_1g030275 34.072 361 191 16 28 363 37 375 2.15e-40 147
MS.gene008102.t1 MTR_1g082390 31.373 357 206 15 20 354 21 360 2.61e-39 144
MS.gene008102.t1 MTR_6g007095 31.347 386 229 13 1 367 7 375 2.90e-39 148
MS.gene008102.t1 MTR_6g007095 27.855 359 227 12 18 363 351 690 2.57e-28 117
MS.gene008102.t1 MTR_8g038680 30.423 355 210 14 28 361 26 364 3.58e-37 138
MS.gene008102.t1 MTR_7g111780 33.083 266 157 10 111 363 2 259 2.23e-34 128
MS.gene008102.t1 MTR_1g030268 33.333 279 160 10 28 293 38 303 6.26e-34 128
MS.gene008102.t1 MTR_8g022810 31.395 344 183 17 29 350 40 352 1.80e-33 128
MS.gene008102.t1 MTR_4g056160 29.042 334 212 9 30 354 27 344 2.32e-31 122
MS.gene008102.t1 MTR_4g056280 29.651 344 215 10 19 354 20 344 6.51e-31 120
MS.gene008102.t1 MTR_2g033930 30.060 336 206 11 30 356 32 347 9.32e-31 120
MS.gene008102.t1 MTR_6g007100 31.285 358 196 16 28 367 31 356 1.29e-30 120
MS.gene008102.t1 MTR_8g031390 28.529 340 212 14 25 356 32 348 1.67e-30 120
MS.gene008102.t1 MTR_3g052490 30.214 374 218 14 3 362 12 356 3.40e-30 119
MS.gene008102.t1 MTR_1g030265 31.310 313 176 13 81 371 53 348 3.43e-30 119
MS.gene008102.t1 MTR_8g031430 28.989 376 224 17 4 363 14 362 6.14e-30 118
MS.gene008102.t1 MTR_8g031420 27.368 380 234 14 2 363 5 360 1.25e-29 117
MS.gene008102.t1 MTR_7g033165 32.090 268 154 7 28 279 31 286 2.50e-29 115
MS.gene008102.t1 MTR_4g122200 29.006 362 220 13 20 369 27 363 5.56e-29 115
MS.gene008102.t1 MTR_1g025680 29.674 337 205 12 30 355 34 349 7.15e-29 117
MS.gene008102.t1 MTR_1g025720 29.641 334 196 12 28 347 35 343 1.94e-28 114
MS.gene008102.t1 MTR_7g113860 29.316 307 177 13 79 361 8 298 2.87e-28 112
MS.gene008102.t1 MTR_1g025780 29.204 339 202 14 30 355 41 354 4.12e-28 113
MS.gene008102.t1 MTR_1g025700 30.205 341 197 13 30 355 50 364 9.65e-28 112
MS.gene008102.t1 MTR_8g014910 28.022 364 223 14 3 354 11 347 1.00e-27 112
MS.gene008102.t1 MTR_3g098270 29.360 344 208 12 28 357 32 354 1.56e-27 112
MS.gene008102.t1 MTR_3g005650 27.746 346 209 14 30 361 30 348 1.80e-27 111
MS.gene008102.t1 MTR_8g089805 28.428 299 183 10 86 363 25 313 4.15e-27 109
MS.gene008102.t1 MTR_2g015080 30.030 333 198 15 34 349 42 356 5.74e-27 110
MS.gene008102.t1 MTR_8g031400 28.613 346 205 14 25 356 32 349 2.74e-26 108
MS.gene008102.t1 MTR_5g078210 27.596 337 208 11 34 358 29 341 4.02e-26 107
MS.gene008102.t1 MTR_2g100620 27.761 335 213 12 30 354 31 346 4.37e-26 107
MS.gene008102.t1 MTR_8g031390 29.000 300 186 13 25 320 32 308 1.04e-25 105
MS.gene008102.t1 MTR_3g052480 29.480 346 207 13 30 360 33 356 1.90e-25 106
MS.gene008102.t1 MTR_8g012540 30.211 331 188 15 28 334 26 337 1.94e-25 105
MS.gene008102.t1 MTR_5g009100 28.152 341 209 14 32 359 48 365 2.56e-25 105
MS.gene008102.t1 MTR_3g052580 28.902 346 211 13 30 362 28 351 3.01e-25 105
MS.gene008102.t1 MTR_1g025760 29.290 338 205 12 30 355 80 395 3.51e-25 105
MS.gene008102.t1 MTR_2g033920 28.696 345 203 12 29 356 34 352 3.65e-25 105
MS.gene008102.t1 MTR_3g052580 28.954 373 222 16 3 362 8 350 5.59e-25 105
MS.gene008102.t1 MTR_8g079050 28.941 387 217 19 3 362 11 366 8.31e-25 104
MS.gene008102.t1 MTR_4g087985 27.221 349 216 12 29 356 35 366 1.42e-24 103
MS.gene008102.t1 MTR_5g022630 28.406 345 217 11 16 349 29 354 1.60e-24 103
MS.gene008102.t1 MTR_4g035353 24.719 356 236 10 18 361 19 354 2.25e-24 102
MS.gene008102.t1 MTR_3g082830 27.300 337 221 10 30 359 38 357 2.33e-24 102
MS.gene008102.t1 MTR_3g464730 28.415 366 228 16 1 355 2 344 2.96e-24 102
MS.gene008102.t1 MTR_5g084750 28.242 347 205 13 30 359 30 349 2.97e-24 102
MS.gene008102.t1 MTR_5g084770 29.310 348 207 13 21 354 21 343 5.97e-24 101
MS.gene008102.t1 MTR_3g114090 29.360 344 205 16 26 355 32 351 6.65e-23 99.0
MS.gene008102.t1 MTR_2g044100 27.635 351 218 15 23 359 36 364 9.20e-23 99.0
MS.gene008102.t1 MTR_5g074270 28.402 338 206 15 28 351 31 346 9.26e-23 98.6
MS.gene008102.t1 MTR_5g022640 27.171 357 228 12 9 355 25 359 1.80e-22 97.8
MS.gene008102.t1 MTR_5g078210 27.795 331 185 12 34 351 29 318 2.07e-22 97.1
MS.gene008102.t1 MTR_7g116510 28.863 343 213 15 29 360 24 346 2.44e-22 97.4
MS.gene008102.t1 MTR_3g435540 27.901 362 210 14 32 367 25 361 3.51e-22 96.7
MS.gene008102.t1 MTR_1g025910 28.701 331 204 14 35 355 41 349 3.93e-22 96.7
MS.gene008102.t1 MTR_5g083040 26.225 347 220 14 30 360 32 358 4.36e-22 96.7
MS.gene008102.t1 MTR_5g084790 27.893 337 219 11 30 359 32 351 4.62e-22 96.3
MS.gene008102.t1 MTR_8g087890 26.506 332 209 13 32 351 33 341 6.10e-22 96.3
MS.gene008102.t1 MTR_1g024890 27.714 350 223 13 23 361 25 355 8.63e-22 95.9
MS.gene008102.t1 MTR_7g116520 26.648 349 216 15 29 361 33 357 1.50e-21 95.1
MS.gene008102.t1 MTR_1g060490 26.269 335 201 12 27 349 34 334 3.80e-21 93.6
MS.gene008102.t1 MTR_0565s0010 24.324 333 216 14 32 351 34 343 2.32e-20 91.7
MS.gene008102.t1 MTR_8g075200 26.720 378 231 15 1 355 2 356 3.11e-20 91.7
MS.gene008102.t1 MTR_4g108690 27.139 339 207 13 32 355 29 342 3.26e-20 91.3
MS.gene008102.t1 MTR_0009s0250 26.646 319 198 11 30 335 33 328 5.41e-20 90.5
MS.gene008102.t1 MTR_1g060500 26.149 348 201 15 27 353 37 349 6.24e-20 90.5
MS.gene008102.t1 MTR_7g104220 26.567 335 201 14 31 353 43 344 2.36e-19 88.6
MS.gene008102.t1 MTR_1g079540 26.453 344 223 10 27 360 28 351 2.81e-19 88.6
MS.gene008102.t1 MTR_3g005660 25.758 330 218 12 32 351 38 350 6.26e-19 87.4
MS.gene008102.t1 MTR_8g022790 25.146 342 218 10 25 356 32 345 7.82e-19 87.0
MS.gene008102.t1 MTR_8g075220 25.066 379 241 13 1 355 1 360 1.17e-18 86.7
MS.gene008102.t1 MTR_3g114120 26.727 333 209 15 30 350 47 356 1.52e-18 86.3
MS.gene008102.t1 MTR_5g093090 25.926 378 228 14 6 362 6 352 2.25e-18 85.9
MS.gene008102.t1 MTR_2g084585 25.000 336 220 11 30 354 30 344 7.01e-18 84.3
MS.gene008102.t1 MTR_7g116570 23.478 345 228 11 29 360 33 354 2.20e-17 83.2
MS.gene008102.t1 MTR_8g022810 32.536 209 108 10 29 221 40 231 4.62e-17 81.6
MS.gene008102.t1 MTR_2g033920 27.338 278 173 9 29 293 34 295 5.16e-17 81.3
MS.gene008102.t1 MTR_4g019880 25.538 372 235 16 2 360 12 354 5.49e-17 82.0
MS.gene008102.t1 MTR_1g079530 26.757 370 214 19 3 356 11 339 7.64e-16 78.6
MS.gene008102.t1 MTR_2g461580 23.907 343 213 11 30 359 31 338 7.64e-16 78.2
MS.gene008102.t1 MTR_3g023220 24.923 325 201 12 31 345 34 325 1.12e-15 77.8
MS.gene008102.t1 MTR_1g092750 23.780 328 211 11 31 349 41 338 1.15e-15 77.8
MS.gene008102.t1 MTR_3g021460 23.684 342 209 12 30 356 31 335 7.46e-15 75.5
MS.gene008102.t1 MTR_3g024510 23.795 332 218 14 32 351 40 348 1.66e-14 74.3
MS.gene008102.t1 MTR_1g092740 23.256 344 204 13 31 353 39 343 8.25e-14 72.4
MS.gene008102.t1 MTR_8g074570 24.713 348 210 13 31 356 39 356 1.42e-13 71.6
MS.gene008102.t1 MTR_5g093090 25.163 306 194 10 6 295 6 292 5.86e-12 66.2
MS.gene008102.t1 MTR_8g087870 25.723 346 209 16 31 361 30 342 1.96e-11 65.1
MS.gene008102.t1 MTR_2g017875 27.108 332 189 19 31 344 35 331 2.07e-11 65.1
MS.gene008102.t1 MTR_6g049220 39.423 104 56 5 19 118 20 120 6.00e-11 61.2
MS.gene008102.t1 MTR_1g092690 23.460 341 211 15 21 349 45 347 7.63e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008102.t1 AT5G45910 43.799 379 187 9 1 362 1 370 1.59e-104 312
MS.gene008102.t1 AT1G28610 42.566 343 181 9 29 362 30 365 9.51e-88 270
MS.gene008102.t1 AT1G31550 40.108 369 204 11 3 361 8 369 9.73e-86 265
MS.gene008102.t1 AT1G28570 41.983 343 184 9 28 361 32 368 2.65e-83 259
MS.gene008102.t1 AT1G28580 40.525 343 189 9 28 361 35 371 2.07e-82 256
MS.gene008102.t1 AT1G28670 40.517 348 187 10 28 363 33 372 3.58e-82 256
MS.gene008102.t1 AT1G31550 39.566 369 203 12 3 361 8 366 5.88e-82 255
MS.gene008102.t1 AT1G28660 41.379 348 183 11 28 363 33 371 9.07e-82 254
MS.gene008102.t1 AT1G28640 39.769 347 190 9 28 363 33 371 1.53e-81 254
MS.gene008102.t1 AT1G28600 39.722 360 194 9 15 361 15 364 1.66e-81 254
MS.gene008102.t1 AT1G28590 39.884 346 193 9 28 364 34 373 2.29e-81 254
MS.gene008102.t1 AT2G27360 40.988 344 187 9 28 361 31 368 6.44e-81 253
MS.gene008102.t1 AT1G28660 41.379 348 182 12 28 363 33 370 8.39e-81 252
MS.gene008102.t1 AT1G28650 39.769 347 190 9 28 363 35 373 4.03e-79 248
MS.gene008102.t1 AT3G48460 37.143 350 189 11 27 361 35 368 4.44e-64 209
MS.gene008102.t1 AT1G28580 38.356 292 168 7 76 361 5 290 8.90e-64 206
MS.gene008102.t1 AT4G01130 32.865 356 202 12 28 361 32 372 1.18e-49 171
MS.gene008102.t1 AT5G03980 34.012 344 175 9 15 353 14 310 2.94e-49 169
MS.gene008102.t1 AT1G28570 40.566 212 119 4 154 361 88 296 4.56e-49 168
MS.gene008102.t1 AT1G28570 40.865 208 116 4 158 361 1 205 1.20e-48 164
MS.gene008102.t1 AT1G54790 32.873 362 197 14 26 361 28 369 2.30e-48 168
MS.gene008102.t1 AT1G56670 32.303 356 196 14 30 368 40 367 4.55e-46 162
MS.gene008102.t1 AT5G14450 32.065 368 205 14 28 371 39 385 1.29e-45 161
MS.gene008102.t1 AT1G67830 32.133 361 201 14 21 353 21 365 7.01e-45 158
MS.gene008102.t1 AT3G62280 31.805 349 208 11 21 361 31 357 1.82e-44 157
MS.gene008102.t1 AT3G05180 32.869 359 193 16 28 359 34 371 4.55e-44 156
MS.gene008102.t1 AT1G54790 31.250 368 207 14 20 361 21 368 6.56e-44 156
MS.gene008102.t1 AT1G09390 31.445 353 203 13 30 368 37 364 2.37e-42 152
MS.gene008102.t1 AT1G54790 29.744 390 210 15 20 361 21 394 9.25e-41 148
MS.gene008102.t1 AT3G26430 31.063 367 212 13 28 371 29 377 8.69e-40 145
MS.gene008102.t1 AT1G28600 39.303 201 104 6 15 204 15 208 2.35e-35 129
MS.gene008102.t1 AT4G01130 32.734 278 164 8 28 293 32 298 2.00e-34 130
MS.gene008102.t1 AT1G28610 41.667 180 88 7 29 198 30 202 4.78e-34 126
MS.gene008102.t1 AT1G71120 29.412 340 199 12 30 356 31 342 2.34e-31 122
MS.gene008102.t1 AT1G56670 31.183 279 156 10 30 293 40 297 4.00e-30 117
MS.gene008102.t1 AT3G27950 28.647 377 224 12 9 363 11 364 9.99e-30 118
MS.gene008102.t1 AT5G45950 30.030 333 201 12 30 354 40 348 1.07e-29 117
MS.gene008102.t1 AT2G40250 28.653 349 206 14 21 350 26 350 2.55e-29 116
MS.gene008102.t1 AT4G10950 27.566 341 218 12 26 356 66 387 3.68e-29 117
MS.gene008102.t1 AT1G75920 28.962 366 214 12 1 355 6 336 1.36e-28 114
MS.gene008102.t1 AT1G23500 26.184 359 230 12 5 356 9 339 1.45e-28 114
MS.gene008102.t1 AT1G73610 27.545 334 205 12 29 355 34 337 6.92e-28 112
MS.gene008102.t1 AT4G01130 28.523 298 179 11 86 361 1 286 7.74e-28 111
MS.gene008102.t1 AT1G06990 27.841 352 219 12 20 358 27 356 2.36e-27 111
MS.gene008102.t1 AT1G75880 28.443 334 214 13 30 355 52 368 4.78e-27 110
MS.gene008102.t1 AT1G71250 26.393 341 225 10 30 361 41 364 5.81e-27 110
MS.gene008102.t1 AT1G20120 27.586 348 211 12 28 358 76 399 9.44e-27 110
MS.gene008102.t1 AT4G10950 27.273 341 215 13 26 356 66 383 1.82e-26 109
MS.gene008102.t1 AT1G53920 29.050 358 210 17 30 370 48 378 3.33e-26 108
MS.gene008102.t1 AT5G63170 28.221 326 194 12 30 346 28 322 3.63e-26 107
MS.gene008102.t1 AT3G62280 29.749 279 172 8 21 293 31 291 6.26e-26 106
MS.gene008102.t1 AT2G23540 28.947 380 220 15 1 356 18 371 9.55e-26 107
MS.gene008102.t1 AT1G75880 29.464 336 207 15 30 355 52 367 2.31e-25 105
MS.gene008102.t1 AT1G20135 26.205 332 203 12 28 349 27 326 2.74e-25 105
MS.gene008102.t1 AT1G75890 28.657 335 212 14 30 355 47 363 2.82e-25 105
MS.gene008102.t1 AT5G40990 29.459 370 223 16 4 357 11 358 3.32e-25 105
MS.gene008102.t1 AT2G42990 28.182 330 209 12 30 350 28 338 3.67e-25 105
MS.gene008102.t1 AT2G03980 29.483 329 198 12 28 345 41 346 4.00e-25 105
MS.gene008102.t1 AT2G03980 29.483 329 198 12 28 345 41 346 4.00e-25 105
MS.gene008102.t1 AT2G03980 29.483 329 198 12 28 345 41 346 4.00e-25 105
MS.gene008102.t1 AT2G03980 29.483 329 198 12 28 345 41 346 4.00e-25 105
MS.gene008102.t1 AT5G08460 28.012 332 203 12 28 344 47 357 5.55e-25 105
MS.gene008102.t1 AT1G75920 28.084 381 213 13 1 355 1 346 5.92e-25 104
MS.gene008102.t1 AT3G14225 28.818 347 207 15 30 357 37 362 6.82e-25 104
MS.gene008102.t1 AT1G75890 28.657 335 212 14 30 355 76 392 7.59e-25 104
MS.gene008102.t1 AT5G15720 26.190 336 210 11 30 350 30 342 1.13e-24 103
MS.gene008102.t1 AT1G75910 26.039 361 224 13 9 355 5 336 1.66e-24 103
MS.gene008102.t1 AT1G75930 29.630 351 187 16 28 353 27 342 1.79e-24 102
MS.gene008102.t1 AT1G20132 27.353 340 209 14 30 355 61 376 2.34e-24 103
MS.gene008102.t1 AT1G75920 29.355 310 179 11 57 355 28 308 3.01e-24 102
MS.gene008102.t1 AT3G14225 28.530 347 204 15 30 357 37 358 3.70e-24 102
MS.gene008102.t1 AT1G53940 30.904 343 203 14 29 357 38 360 6.21e-24 102
MS.gene008102.t1 AT3G16370 26.648 349 227 11 20 359 22 350 7.67e-24 101
MS.gene008102.t1 AT5G45960 26.269 335 219 11 30 353 47 364 2.30e-23 100
MS.gene008102.t1 AT2G04570 25.575 348 215 12 30 360 28 348 4.21e-23 99.4
MS.gene008102.t1 AT3G04290 28.235 340 218 10 29 360 28 349 4.44e-23 99.4
MS.gene008102.t1 AT1G59406 27.824 363 233 13 1 355 1 342 8.42e-23 98.6
MS.gene008102.t1 AT1G59030 27.824 363 233 13 1 355 1 342 8.42e-23 98.6
MS.gene008102.t1 AT1G58725 27.824 363 233 13 1 355 1 342 8.42e-23 98.6
MS.gene008102.t1 AT5G42170 27.761 335 209 12 30 354 50 361 9.95e-23 98.6
MS.gene008102.t1 AT1G75890 28.035 346 213 15 30 355 47 376 1.01e-22 98.6
MS.gene008102.t1 AT5G33370 26.513 347 215 14 29 360 29 350 1.94e-22 97.8
MS.gene008102.t1 AT4G26790 26.409 337 220 11 28 355 27 344 3.57e-22 96.7
MS.gene008102.t1 AT4G26790 26.409 337 220 11 28 355 27 344 3.57e-22 96.7
MS.gene008102.t1 AT2G30310 28.969 359 223 17 5 350 7 346 3.68e-22 96.7
MS.gene008102.t1 AT5G03820 26.005 373 230 17 1 354 4 349 9.98e-22 95.5
MS.gene008102.t1 AT3G09930 26.844 339 211 11 21 349 30 341 1.25e-21 95.1
MS.gene008102.t1 AT3G09930 26.844 339 211 11 21 349 30 341 1.25e-21 95.1
MS.gene008102.t1 AT4G28780 27.697 343 216 15 29 360 30 351 1.62e-21 95.1
MS.gene008102.t1 AT1G29670 26.220 328 214 11 32 351 34 341 1.88e-21 94.7
MS.gene008102.t1 AT5G03820 25.737 373 231 16 1 354 32 377 2.40e-21 94.7
MS.gene008102.t1 AT5G22810 27.473 364 234 15 1 354 8 351 2.97e-21 94.4
MS.gene008102.t1 AT2G31540 28.531 354 223 15 18 358 22 358 4.65e-21 93.6
MS.gene008102.t1 AT3G50400 27.632 380 229 15 1 356 1 358 5.03e-21 93.6
MS.gene008102.t1 AT1G29670 26.524 328 213 11 32 351 102 409 6.61e-21 94.0
MS.gene008102.t1 AT2G19010 28.571 343 197 16 32 361 32 339 1.97e-20 91.7
MS.gene008102.t1 AT2G19010 27.865 384 219 18 1 361 21 369 2.37e-20 91.7
MS.gene008102.t1 AT1G58430 26.488 336 219 13 28 353 33 350 2.38e-20 91.7
MS.gene008102.t1 AT1G53990 26.146 371 233 15 1 357 6 349 2.73e-20 91.7
MS.gene008102.t1 AT5G18430 25.287 348 220 13 29 360 27 350 3.03e-20 91.3
MS.gene008102.t1 AT5G37690 24.925 333 212 12 34 353 31 338 3.99e-20 90.9
MS.gene008102.t1 AT1G74460 26.269 335 215 10 32 355 25 338 4.13e-20 90.9
MS.gene008102.t1 AT1G54000 26.471 340 203 14 27 353 33 338 6.22e-20 90.9
MS.gene008102.t1 AT1G20130 26.023 342 218 11 30 355 204 526 7.67e-20 91.3
MS.gene008102.t1 AT1G29660 26.126 333 209 16 32 351 34 342 8.25e-20 90.1
MS.gene008102.t1 AT1G75900 26.727 333 217 13 30 354 43 356 8.25e-20 90.1
MS.gene008102.t1 AT1G58520 27.434 339 200 12 30 355 30 335 1.24e-19 89.4
MS.gene008102.t1 AT1G58525 27.434 339 200 12 30 355 30 335 1.24e-19 89.4
MS.gene008102.t1 AT1G20130 26.023 342 218 11 30 355 184 506 1.58e-19 90.5
MS.gene008102.t1 AT1G54020 25.281 356 219 15 6 350 8 327 1.66e-19 89.4
MS.gene008102.t1 AT5G03610 24.561 342 218 10 25 355 38 350 2.70e-19 88.6
MS.gene008102.t1 AT5G15720 25.806 279 176 9 30 293 30 292 3.48e-19 87.4
MS.gene008102.t1 AT1G54010 26.727 333 197 15 26 345 32 330 1.08e-18 87.0
MS.gene008102.t1 AT3G53100 25.000 336 220 13 30 354 29 343 1.43e-18 86.3
MS.gene008102.t1 AT5G41890 26.359 368 229 13 11 356 12 359 2.08e-18 86.3
MS.gene008102.t1 AT2G30220 27.374 358 229 15 5 350 7 345 3.02e-18 85.5
MS.gene008102.t1 AT2G24560 26.197 355 233 14 21 364 24 360 5.28e-18 84.7
MS.gene008102.t1 AT1G33811 25.656 343 227 13 31 361 35 361 9.87e-18 84.0
MS.gene008102.t1 AT1G75920 26.575 365 193 13 1 355 6 305 1.03e-17 83.2
MS.gene008102.t1 AT2G19060 27.378 347 198 17 32 359 32 343 1.19e-17 83.6
MS.gene008102.t1 AT3G14820 26.786 336 210 12 30 354 32 342 1.97e-17 83.2
MS.gene008102.t1 AT5G55050 27.920 351 212 15 30 362 39 366 9.68e-17 81.3
MS.gene008102.t1 AT1G53940 31.273 275 164 11 29 293 38 297 2.62e-16 79.3
MS.gene008102.t1 AT5G03600 23.214 336 212 11 24 349 8 307 5.34e-16 78.6
MS.gene008102.t1 AT5G03600 22.905 358 223 12 9 349 21 342 6.21e-16 78.6
MS.gene008102.t1 AT3G14210 26.023 342 206 16 26 353 32 340 1.08e-15 78.2
MS.gene008102.t1 AT2G19050 24.412 340 215 11 32 359 33 342 1.87e-15 77.0
MS.gene008102.t1 AT2G36325 24.773 331 215 11 31 354 48 351 2.65e-15 76.6
MS.gene008102.t1 AT5G37690 24.169 331 209 13 34 353 31 330 3.21e-15 76.6
MS.gene008102.t1 AT5G45670 23.653 334 217 14 32 351 31 340 3.92e-14 73.2
MS.gene008102.t1 AT5G33370 25.000 280 177 11 29 293 29 290 6.85e-13 69.3
MS.gene008102.t1 AT2G31550 28.019 207 128 8 161 358 23 217 9.38e-13 67.4
MS.gene008102.t1 AT2G24560 27.778 288 180 13 21 294 24 297 1.05e-12 68.6
MS.gene008102.t1 AT3G43550 27.076 277 169 10 30 293 30 286 2.62e-12 67.0
MS.gene008102.t1 AT2G04020 29.439 214 132 10 28 232 41 244 4.08e-12 66.2
MS.gene008102.t1 AT4G16230 26.496 234 148 8 1 221 3 225 1.09e-11 64.7
MS.gene008102.t1 AT2G04020 30.000 210 128 10 28 228 41 240 1.35e-11 65.5

Find 62 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTTCAAAACTAATAAAT+TGG 0.141859 3.3:+61102415 MS.gene008102:CDS
AAAGAAGACTATGATGAATT+TGG 0.241383 3.3:+61102026 MS.gene008102:CDS
TCAGAGCAAACTGTTGTATT+TGG 0.251645 3.3:-61102393 None:intergenic
GTGATCAAATGCAGCATTTC+CGG 0.268623 3.3:-61100704 None:intergenic
CATTAAATGTGCAATTTGAT+TGG 0.321915 3.3:+61101169 MS.gene008102:CDS
ACGAGAGATAATTCCCTTGA+TGG 0.349662 3.3:+61101422 MS.gene008102:CDS
ATGAAGATCTTCATTCTGTT+TGG 0.357199 3.3:+61100583 MS.gene008102:CDS
AGAGTCACCGAAGTTGAATA+TGG 0.389848 3.3:-61100671 None:intergenic
GCGGTAGAGCTAGTGGTTCC+AGG 0.394718 3.3:+61101948 MS.gene008102:CDS
TTAATTGTAGCTGAGGCATA+TGG 0.396651 3.3:+61101003 MS.gene008102:intron
GACATCAAGTGCAGTTGAAC+CGG 0.404703 3.3:-61101103 None:intergenic
CAATACTGATCATGATGATA+TGG 0.409129 3.3:-61102360 None:intergenic
TATTTGCTTATAAGCGGCTT+CGG 0.415948 3.3:-61102454 None:intergenic
AAACAGAATGAAGATCTTCA+TGG 0.420108 3.3:-61100581 None:intergenic
TTGAAGTATGTTGAACCATA+AGG 0.422999 3.3:-61100751 None:intergenic
ACATACTTCAAACATCCTTC+AGG 0.427169 3.3:+61100763 MS.gene008102:CDS
TCCTTCAAAACTAATAAATT+GGG 0.433608 3.3:+61102416 MS.gene008102:CDS
CGACTCATCATAGATTTCAT+AGG 0.433635 3.3:+61100802 MS.gene008102:CDS
TGCACATTTAATGATTCCTT+CGG 0.433804 3.3:-61101159 None:intergenic
ATTTGATCACCTCAAAGAAA+TGG 0.440475 3.3:+61100717 MS.gene008102:CDS
TTGTTTATAGTGGGAGAGAT+TGG 0.442235 3.3:+61101354 MS.gene008102:CDS
CCTTCAGGACGCATGTCAAA+TGG 0.470165 3.3:+61100778 MS.gene008102:CDS
TATCAAGCACCACAACAGTA+TGG 0.472277 3.3:+61102182 MS.gene008102:CDS
TTTGATGGATTCAACCATCA+AGG 0.475082 3.3:-61101436 None:intergenic
TGTCAGGCTTTAATTGAAGA+AGG 0.476299 3.3:+61101924 MS.gene008102:intron
TAAGCTATCTTGAAAGGAGC+AGG 0.481547 3.3:-61102522 None:intergenic
CATATCATCATGATCAGTAT+TGG 0.482301 3.3:+61102361 MS.gene008102:CDS
TTTAGAGAAGGATATGCAAA+AGG 0.485906 3.3:-61102498 None:intergenic
AATATACTATCTTAGCTTGA+GGG 0.487430 3.3:-61102130 None:intergenic
CACCCCATTGGAAAGTTCCC+TGG 0.497541 3.3:-61101966 None:intergenic
GACTTATGTAAAAGCAAAGA+AGG 0.499168 3.3:+61101210 MS.gene008102:CDS
GCTTATAAGCAAATAGCTAA+AGG 0.500430 3.3:+61102462 MS.gene008102:CDS
TTGGTGATATTCTTATAGGC+TGG 0.507722 3.3:-61101039 None:intergenic
AAAGCATGTTGTGGAGGAAG+TGG 0.510426 3.3:+61102336 MS.gene008102:CDS
TGGTGCTTGATATAAACGTT+TGG 0.513584 3.3:-61102171 None:intergenic
GTTCCAGGGAACTTTCCAAT+GGG 0.514992 3.3:+61101963 MS.gene008102:CDS
TTTATAGTGGGAGAGATTGG+TGG 0.518109 3.3:+61101357 MS.gene008102:CDS
TAATTGTAGCTGAGGCATAT+GGG 0.522458 3.3:+61101004 MS.gene008102:intron
CAACTCTAAGCTATCTTGAA+AGG 0.524346 3.3:-61102528 None:intergenic
TTTAGCTATTTGCTTATAAG+CGG 0.529705 3.3:-61102460 None:intergenic
TTGATGGATTCAACCATCAA+GGG 0.538358 3.3:-61101435 None:intergenic
AATATGGCTTCATACGGTAG+AGG 0.557506 3.3:-61100655 None:intergenic
TTTGGTATCACCTTTGCATG+TGG 0.561909 3.3:+61100601 MS.gene008102:CDS
GGTTCCAGGGAACTTTCCAA+TGG 0.563863 3.3:+61101962 MS.gene008102:CDS
CCATTTGACATGCGTCCTGA+AGG 0.565164 3.3:-61100778 None:intergenic
CGGTAGAGCTAGTGGTTCCA+GGG 0.577023 3.3:+61101949 MS.gene008102:CDS
ATAGCTAAAGGTTTAATCGA+AGG 0.579347 3.3:+61102474 MS.gene008102:CDS
TCAAAACTAATAAATTGGGA+TGG 0.581957 3.3:+61102420 MS.gene008102:CDS
GGTGACTCTACAAGTGATAC+CGG 0.585156 3.3:+61100685 MS.gene008102:CDS
AGAAGGAGCGGTAGAGCTAG+TGG 0.586129 3.3:+61101941 MS.gene008102:CDS
AAATATACTATCTTAGCTTG+AGG 0.588022 3.3:-61102131 None:intergenic
ATTTGTATAACATACATTGG+TGG 0.593190 3.3:-61101463 None:intergenic
GGAGTTAATTTCGCTTACGC+CGG 0.599725 3.3:+61101084 MS.gene008102:CDS
GGCTTTAATTGAAGAAGGAG+CGG 0.599772 3.3:+61101929 MS.gene008102:intron
CATCATGATCAGTATTGGTG+TGG 0.600970 3.3:+61102366 MS.gene008102:CDS
ATGTCAGTATTACACCCCAT+TGG 0.600994 3.3:-61101978 None:intergenic
AAGTTGAATATGGCTTCATA+CGG 0.613834 3.3:-61100661 None:intergenic
TAGTGGAGTCACTGCACCGA+AGG 0.621991 3.3:+61101143 MS.gene008102:CDS
TATGAAGCCATATTCAACTT+CGG 0.629345 3.3:+61100664 MS.gene008102:CDS
CTCCACACACCATACTGTTG+TGG 0.629875 3.3:-61102191 None:intergenic
TTCCAGGGAACTTTCCAATG+GGG 0.642288 3.3:+61101964 MS.gene008102:CDS
TAAGCGGCTTCGGTAAAATG+TGG 0.667134 3.3:-61102444 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGATATAAATAAATAG+GGG + chr3.3:61101716-61101735 MS.gene008102:intron 10.0%
!! AGAAAAAGATATAAATAAAT+AGG + chr3.3:61101714-61101733 MS.gene008102:intron 10.0%
!! GAAAAAGATATAAATAAATA+GGG + chr3.3:61101715-61101734 MS.gene008102:intron 10.0%
!! AAAACAATGAAAATTTAACA+AGG - chr3.3:61102231-61102250 None:intergenic 15.0%
!! TTTATTTAATTATGTTTGTC+AGG + chr3.3:61101908-61101927 MS.gene008102:intron 15.0%
!!! CTAAAATAATCTATTTTATG+AGG + chr3.3:61100918-61100937 MS.gene008102:intron 15.0%
!!! TTATTTTTGTGTGATATAAT+TGG + chr3.3:61101255-61101274 MS.gene008102:intron 15.0%
!! AAAAACTCATTGTTTATAGT+GGG + chr3.3:61101345-61101364 MS.gene008102:CDS 20.0%
!! AAGATTTGTATAACATACAT+TGG - chr3.3:61101469-61101488 None:intergenic 20.0%
!! AATGTACATAAATTAGTGAA+TGG - chr3.3:61102277-61102296 None:intergenic 20.0%
!! ATCCTTCAAAACTAATAAAT+TGG + chr3.3:61102415-61102434 MS.gene008102:CDS 20.0%
!! ATGGAAAAATTAATTCCTTA+TGG + chr3.3:61100736-61100755 MS.gene008102:CDS 20.0%
!! ATGTACATAAATTAGTGAAT+GGG - chr3.3:61102276-61102295 None:intergenic 20.0%
!! GACAAAAAAATTTCTCAAAA+GGG + chr3.3:61101798-61101817 MS.gene008102:intron 20.0%
!! TCCTTCAAAACTAATAAATT+GGG + chr3.3:61102416-61102435 MS.gene008102:CDS 20.0%
!! TTTATGTACATTAATGATGT+AGG + chr3.3:61102285-61102304 MS.gene008102:intron 20.0%
!!! AAATATTTTAGTGGTATTAG+TGG + chr3.3:61101126-61101145 MS.gene008102:CDS 20.0%
!!! AGTAATTGTGTTTAAGTTAT+AGG + chr3.3:61101843-61101862 MS.gene008102:intron 20.0%
!!! ATAGATTATTTTAGAGTTCT+TGG - chr3.3:61100912-61100931 None:intergenic 20.0%
!!! ATATGCGTTATTTTTTCAAA+AGG - chr3.3:61101579-61101598 None:intergenic 20.0%
!!! TATGCGTTATTTTTTCAAAA+GGG - chr3.3:61101578-61101597 None:intergenic 20.0%
!!! TTAATTTTTCCATTTCTTTG+AGG - chr3.3:61100729-61100748 None:intergenic 20.0%
! AAAATAACATGCAAGGATTT+AGG - chr3.3:61101242-61101261 None:intergenic 25.0%
! AAAGAAGACTATGATGAATT+TGG + chr3.3:61102026-61102045 MS.gene008102:CDS 25.0%
! AACAAAACAAACGTATTGTT+AGG - chr3.3:61101296-61101315 None:intergenic 25.0%
! AGGTATTAGTGAATAACTAA+TGG + chr3.3:61101863-61101882 MS.gene008102:intron 25.0%
! ATGTACTTGAAAATACCAAA+AGG + chr3.3:61101761-61101780 MS.gene008102:intron 25.0%
! ATTTGTATAACATACATTGG+TGG - chr3.3:61101466-61101485 None:intergenic 25.0%
! CAAAAACTCATTGTTTATAG+TGG + chr3.3:61101344-61101363 MS.gene008102:CDS 25.0%
! CATTAAATGTGCAATTTGAT+TGG + chr3.3:61101169-61101188 MS.gene008102:CDS 25.0%
! GGACAAAAAAATTTCTCAAA+AGG + chr3.3:61101797-61101816 MS.gene008102:intron 25.0%
! TCAAAACTAATAAATTGGGA+TGG + chr3.3:61102420-61102439 MS.gene008102:CDS 25.0%
! TGTACTTGAAAATACCAAAA+GGG + chr3.3:61101762-61101781 MS.gene008102:intron 25.0%
! TTTAGCTATTTGCTTATAAG+CGG - chr3.3:61102463-61102482 None:intergenic 25.0%
!! AAACTAACTCTCTCTTTTAA+AGG - chr3.3:61101662-61101681 None:intergenic 25.0%
!! AAATATACTATCTTAGCTTG+AGG - chr3.3:61102134-61102153 None:intergenic 25.0%
!! AATATACTATCTTAGCTTGA+GGG - chr3.3:61102133-61102152 None:intergenic 25.0%
!! ATAAATAAATAGGGGTATGT+TGG + chr3.3:61101724-61101743 MS.gene008102:intron 25.0%
!! GAGGTCGTTAATAATTTTTA+AGG + chr3.3:61100937-61100956 MS.gene008102:intron 25.0%
!!! CTTGATGTCAAATATTTTAG+TGG + chr3.3:61101117-61101136 MS.gene008102:CDS 25.0%
!!! GATTTTGGTGATATTCTTAT+AGG - chr3.3:61101046-61101065 None:intergenic 25.0%
!!! TCCCAATTTATTAGTTTTGA+AGG - chr3.3:61102420-61102439 None:intergenic 25.0%
!!! TTCTTTGCTTTTACATAAGT+CGG - chr3.3:61101211-61101230 None:intergenic 25.0%
!!! TTTCTGTTTTATTGTCTCTA+TGG - chr3.3:61102108-61102127 None:intergenic 25.0%
AAGTTGAATATGGCTTCATA+CGG - chr3.3:61100664-61100683 None:intergenic 30.0%
AATCCCAGATGCTATAAAAA+AGG + chr3.3:61101062-61101081 MS.gene008102:CDS 30.0%
ATAGCTAAAGGTTTAATCGA+AGG + chr3.3:61102474-61102493 MS.gene008102:CDS 30.0%
ATCCCAGATGCTATAAAAAA+GGG + chr3.3:61101063-61101082 MS.gene008102:CDS 30.0%
ATGAAGATCTTCATTCTGTT+TGG + chr3.3:61100583-61100602 MS.gene008102:CDS 30.0%
ATTTGATCACCTCAAAGAAA+TGG + chr3.3:61100717-61100736 MS.gene008102:CDS 30.0%
CAATACTGATCATGATGATA+TGG - chr3.3:61102363-61102382 None:intergenic 30.0%
CATATCATCATGATCAGTAT+TGG + chr3.3:61102361-61102380 MS.gene008102:CDS 30.0%
GACTTATGTAAAAGCAAAGA+AGG + chr3.3:61101210-61101229 MS.gene008102:CDS 30.0%
GCTTATAAGCAAATAGCTAA+AGG + chr3.3:61102462-61102481 MS.gene008102:CDS 30.0%
TAGTGAATAACTAATGGTCT+TGG + chr3.3:61101869-61101888 MS.gene008102:intron 30.0%
TATGAAGCCATATTCAACTT+CGG + chr3.3:61100664-61100683 MS.gene008102:CDS 30.0%
TCAAAAGGGTCCTATAATTA+GGG + chr3.3:61101812-61101831 MS.gene008102:intron 30.0%
TCACACAAAAATAACATGCA+AGG - chr3.3:61101249-61101268 None:intergenic 30.0%
TGCACATTTAATGATTCCTT+CGG - chr3.3:61101162-61101181 None:intergenic 30.0%
TTCTTATAGGCTGGTAAAAA+TGG - chr3.3:61101033-61101052 None:intergenic 30.0%
TTGAAGTATGTTGAACCATA+AGG - chr3.3:61100754-61100773 None:intergenic 30.0%
TTTAGAGAAGGATATGCAAA+AGG - chr3.3:61102501-61102520 None:intergenic 30.0%
! ACCAAAAGGGTCTTATAAAA+AGG + chr3.3:61101775-61101794 MS.gene008102:intron 30.0%
! CCAAAAGGGTCTTATAAAAA+GGG + chr3.3:61101776-61101795 MS.gene008102:intron 30.0%
! GAGCTAGTGAAATTTTCAAT+CGG - chr3.3:61100974-61100993 None:intergenic 30.0%
! TCAAAAGGGCCTTATAATTA+GGG - chr3.3:61101564-61101583 None:intergenic 30.0%
! TGTAGGTTTTACTTCTGATA+AGG + chr3.3:61102302-61102321 MS.gene008102:intron 30.0%
! TTCAAAAGGGCCTTATAATT+AGG - chr3.3:61101565-61101584 None:intergenic 30.0%
!! TACATTGGTGGTATTTTTGA+TGG - chr3.3:61101454-61101473 None:intergenic 30.0%
!! TCTTTGCTTTTACATAAGTC+GGG - chr3.3:61101210-61101229 None:intergenic 30.0%
!! TTTTATAGCATCTGGGATTT+TGG - chr3.3:61101061-61101080 None:intergenic 30.0%
!!! TCTCATTTTAATTGTAGCTG+AGG + chr3.3:61100996-61101015 MS.gene008102:intron 30.0%
ACATACTTCAAACATCCTTC+AGG + chr3.3:61100763-61100782 MS.gene008102:CDS 35.0%
CGACTCATCATAGATTTCAT+AGG + chr3.3:61100802-61100821 MS.gene008102:CDS 35.0%
CTCAAAAGGGTCCTATAATT+AGG + chr3.3:61101811-61101830 MS.gene008102:intron 35.0%
TAATTGTAGCTGAGGCATAT+GGG + chr3.3:61101004-61101023 MS.gene008102:intron 35.0%
TATTTGCTTATAAGCGGCTT+CGG - chr3.3:61102457-61102476 None:intergenic 35.0%
TCAGAGCAAACTGTTGTATT+TGG - chr3.3:61102396-61102415 None:intergenic 35.0%
TGGTGCTTGATATAAACGTT+TGG - chr3.3:61102174-61102193 None:intergenic 35.0%
TTAATTGTAGCTGAGGCATA+TGG + chr3.3:61101003-61101022 MS.gene008102:intron 35.0%
! CCCTTTTTATAAGACCCTTT+TGG - chr3.3:61101779-61101798 None:intergenic 35.0%
! TGTCAGGCTTTAATTGAAGA+AGG + chr3.3:61101924-61101943 MS.gene008102:intron 35.0%
! TTGGTGATATTCTTATAGGC+TGG - chr3.3:61101042-61101061 None:intergenic 35.0%
! TTGTTTATAGTGGGAGAGAT+TGG + chr3.3:61101354-61101373 MS.gene008102:CDS 35.0%
! TTTTACTTCTGATAAGGTCG+AGG + chr3.3:61102308-61102327 MS.gene008102:CDS 35.0%
!! TTGATGGATTCAACCATCAA+GGG - chr3.3:61101438-61101457 None:intergenic 35.0%
!! TTTGATGGATTCAACCATCA+AGG - chr3.3:61101439-61101458 None:intergenic 35.0%
!!! ACTCCCTTTTTTATAGCATC+TGG - chr3.3:61101069-61101088 None:intergenic 35.0%
!!! CTCCCTTTTTTATAGCATCT+GGG - chr3.3:61101068-61101087 None:intergenic 35.0%
AAGGGTCCTATAATTAGGGA+CGG + chr3.3:61101816-61101835 MS.gene008102:intron 40.0%
AATATGGCTTCATACGGTAG+AGG - chr3.3:61100658-61100677 None:intergenic 40.0%
ACGAGAGATAATTCCCTTGA+TGG + chr3.3:61101422-61101441 MS.gene008102:CDS 40.0%
AGAGTCACCGAAGTTGAATA+TGG - chr3.3:61100674-61100693 None:intergenic 40.0%
ATGTCAGTATTACACCCCAT+TGG - chr3.3:61101981-61102000 None:intergenic 40.0%
GTGATCAAATGCAGCATTTC+CGG - chr3.3:61100707-61100726 None:intergenic 40.0%
TAAGCTATCTTGAAAGGAGC+AGG - chr3.3:61102525-61102544 None:intergenic 40.0%
TACCTCCGTCCCTAATTATA+AGG + chr3.3:61101552-61101571 MS.gene008102:intron 40.0%
TATCAAGCACCACAACAGTA+TGG + chr3.3:61102182-61102201 MS.gene008102:CDS 40.0%
TCCAAAAAAGCCACATGCAA+AGG - chr3.3:61100614-61100633 None:intergenic 40.0%
TTTGGTATCACCTTTGCATG+TGG + chr3.3:61100601-61100620 MS.gene008102:CDS 40.0%
! AAGGGCCTTATAATTAGGGA+CGG - chr3.3:61101560-61101579 None:intergenic 40.0%
! GGCTTTAATTGAAGAAGGAG+CGG + chr3.3:61101929-61101948 MS.gene008102:intron 40.0%
! TTTATAGTGGGAGAGATTGG+TGG + chr3.3:61101357-61101376 MS.gene008102:CDS 40.0%
!! CATCATGATCAGTATTGGTG+TGG + chr3.3:61102366-61102385 MS.gene008102:CDS 40.0%
!!! AAAGGAGCAGGTTTTAGAGA+AGG - chr3.3:61102513-61102532 None:intergenic 40.0%
!!! ACCTTTGCATGTGGCTTTTT+TGG + chr3.3:61100610-61100629 MS.gene008102:CDS 40.0%
!!! GAGGTTTTGAAAGCATGTTG+TGG + chr3.3:61102327-61102346 MS.gene008102:CDS 40.0%
!!! GTTTTGAAAGCATGTTGTGG+AGG + chr3.3:61102330-61102349 MS.gene008102:CDS 40.0%
AAAGCATGTTGTGGAGGAAG+TGG + chr3.3:61102336-61102355 MS.gene008102:CDS 45.0%
CTACCTCCGTCCCTAATTAT+AGG - chr3.3:61101570-61101551 None:intergenic 45.0%
GACATCAAGTGCAGTTGAAC+CGG - chr3.3:61101106-61101125 None:intergenic 45.0%
GGAGTTAATTTCGCTTACGC+CGG + chr3.3:61101084-61101103 MS.gene008102:CDS 45.0%
GGTGACTCTACAAGTGATAC+CGG + chr3.3:61100685-61100704 MS.gene008102:CDS 45.0%
GTTCCAGGGAACTTTCCAAT+GGG + chr3.3:61101963-61101982 MS.gene008102:CDS 45.0%
TAAGCGGCTTCGGTAAAATG+TGG - chr3.3:61102447-61102466 None:intergenic 45.0%
TTCCAGGGAACTTTCCAATG+GGG + chr3.3:61101964-61101983 MS.gene008102:CDS 45.0%
CACCACAACAGTATGGTGTG+TGG + chr3.3:61102189-61102208 MS.gene008102:intron 50.0%
CCATTTGACATGCGTCCTGA+AGG - chr3.3:61100781-61100800 None:intergenic 50.0%
CCTTCAGGACGCATGTCAAA+TGG + chr3.3:61100778-61100797 MS.gene008102:CDS 50.0%
CTCCACACACCATACTGTTG+TGG - chr3.3:61102194-61102213 None:intergenic 50.0%
GGTCCTATAATTAGGGACGG+AGG + chr3.3:61101819-61101838 MS.gene008102:intron 50.0%
GGTTCCAGGGAACTTTCCAA+TGG + chr3.3:61101962-61101981 MS.gene008102:CDS 50.0%
! GGCCTTATAATTAGGGACGG+AGG - chr3.3:61101557-61101576 None:intergenic 50.0%
AGAAGGAGCGGTAGAGCTAG+TGG + chr3.3:61101941-61101960 MS.gene008102:CDS 55.0%
CACCCCATTGGAAAGTTCCC+TGG - chr3.3:61101969-61101988 None:intergenic 55.0%
CGGTAGAGCTAGTGGTTCCA+GGG + chr3.3:61101949-61101968 MS.gene008102:CDS 55.0%
TAGTGGAGTCACTGCACCGA+AGG + chr3.3:61101143-61101162 MS.gene008102:CDS 55.0%
GCGGTAGAGCTAGTGGTTCC+AGG + chr3.3:61101948-61101967 MS.gene008102:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 61100583 61102545 61100583 ID=MS.gene008102
chr3.3 mRNA 61100583 61102545 61100583 ID=MS.gene008102.t1;Parent=MS.gene008102
chr3.3 exon 61100583 61100823 61100583 ID=MS.gene008102.t1.exon1;Parent=MS.gene008102.t1
chr3.3 CDS 61100583 61100823 61100583 ID=cds.MS.gene008102.t1;Parent=MS.gene008102.t1
chr3.3 exon 61101013 61101231 61101013 ID=MS.gene008102.t1.exon2;Parent=MS.gene008102.t1
chr3.3 CDS 61101013 61101231 61101013 ID=cds.MS.gene008102.t1;Parent=MS.gene008102.t1
chr3.3 exon 61101328 61101470 61101328 ID=MS.gene008102.t1.exon3;Parent=MS.gene008102.t1
chr3.3 CDS 61101328 61101470 61101328 ID=cds.MS.gene008102.t1;Parent=MS.gene008102.t1
chr3.3 exon 61101930 61102203 61101930 ID=MS.gene008102.t1.exon4;Parent=MS.gene008102.t1
chr3.3 CDS 61101930 61102203 61101930 ID=cds.MS.gene008102.t1;Parent=MS.gene008102.t1
chr3.3 exon 61102307 61102545 61102307 ID=MS.gene008102.t1.exon5;Parent=MS.gene008102.t1
chr3.3 CDS 61102307 61102545 61102307 ID=cds.MS.gene008102.t1;Parent=MS.gene008102.t1
Gene Sequence

>MS.gene008102

ATGAAGATCTTCATTCTGTTTGGTATCACCTTTGCATGTGGCTTTTTTGGAAACTTTATTTCAAATGCTAATCCTCTACCGTATGAAGCCATATTCAACTTCGGTGACTCTACAAGTGATACCGGAAATGCTGCATTTGATCACCTCAAAGAAATGGAAAAATTAATTCCTTATGGTTCAACATACTTCAAACATCCTTCAGGACGCATGTCAAATGGACGACTCATCATAGATTTCATAGGTACTTTCACACATACTTTTTTTTTTCTTATATAAATTCTTTTTGTATTAATGAAATAGTAAATAACAAAAAAAAAAAAATACTACCAAGAACTCTAAAATAATCTATTTTATGAGGTCGTTAATAATTTTTAAGGTTGATACATTTCCGATTGAAAATTTCACTAGCTCATTCTCATTTTAATTGTAGCTGAGGCATATGGGTTGCCATTTTTACCAGCCTATAAGAATATCACCAAAATCCCAGATGCTATAAAAAAGGGAGTTAATTTCGCTTACGCCGGTTCAACTGCACTTGATGTCAAATATTTTAGTGGTATTAGTGGAGTCACTGCACCGAAGGAATCATTAAATGTGCAATTTGATTGGTTTAAGAAGCTAAAACCCGACTTATGTAAAAGCAAAGAAGGTTTTGTCCTAAATCCTTGCATGTTATTTTTGTGTGATATAATTGGTTTATCATCTATATGCCTAACAATACGTTTGTTTTGTTATGAGTTCACAGAATGTGACAGCTTCTTCAAAAACTCATTGTTTATAGTGGGAGAGATTGGTGGAAATGATATTTTTTATCATCTTTCTAAAACTATTACTGAACTACGAGAGATAATTCCCTTGATGGTTGAATCCATCAAAAATACCACCAATGTATGTTATACAAATCTTAAGTAATTAAATGTTTACATATTAGCAAAAAATAAATAATTGTTGACTTCAATTGTAGAATACTACCTCCGTCCCTAATTATAAGGCCCTTTTGAAAAAATAACGCATATTAAGAAAATTGATAAGTGTAATAAATTTGTTAGTAATTAATATTGTTTTTACAATTTTATCCTTTAAAAGAGAGAGTTAGTTTATGTTTTCAACGTAATATTTAATGTTGATTGAAGAAAAAGATATAAATAAATAGGGGTATGTTGGTAAAGAATTAATTAATGTACTTGAAAATACCAAAAGGGTCTTATAAAAAGGGACAAAAAAATTTCTCAAAAGGGTCCTATAATTAGGGACGGAGGTAGTAATTGTGTTTAAGTTATAGGTATTAGTGAATAACTAATGGTCTTGGAAAAATGTAATAGAGATTTATTTAATTATGTTTGTCAGGCTTTAATTGAAGAAGGAGCGGTAGAGCTAGTGGTTCCAGGGAACTTTCCAATGGGGTGTAATACTGACATATTGTCAAAAAAGATTAGTCAGAAGAAAGAAGACTATGATGAATTTGGATGTTTGACAGCTTACAACACTCTCATCGAATACTTTAATGAGCAGCTAAAAAAATCCATAGAGACAATAAAACAGAAACACCCTCAAGCTAAGATAGTATATTTTGACTATTACAACGATGCCAAACGTTTATATCAAGCACCACAACAGTATGGTGTGTGGAGCAATTATTTTCTTTCCTTGTTAAATTTTCATTGTTTTATTCTTGTCAAATTTGTTTGATCCCATTCACTAATTTATGTACATTAATGATGTAGGTTTTACTTCTGATAAGGTCGAGGTTTTGAAAGCATGTTGTGGAGGAAGTGGACCATATCATCATGATCAGTATTGGTGTGGAACGCCAAATACAACAGTTTGCTCTGATCCTTCAAAACTAATAAATTGGGATGGACCACATTTTACCGAAGCCGCTTATAAGCAAATAGCTAAAGGTTTAATCGAAGGACCTTTTGCATATCCTTCTCTAAAACCTGCTCCTTTCAAGATAGCTTAG
Protein sequence

>MS.gene008102.t1

MKIFILFGITFACGFFGNFISNANPLPYEAIFNFGDSTSDTGNAAFDHLKEMEKLIPYGSTYFKHPSGRMSNGRLIIDFIAEAYGLPFLPAYKNITKIPDAIKKGVNFAYAGSTALDVKYFSGISGVTAPKESLNVQFDWFKKLKPDLCKSKEECDSFFKNSLFIVGEIGGNDIFYHLSKTITELREIIPLMVESIKNTTNALIEEGAVELVVPGNFPMGCNTDILSKKISQKKEDYDEFGCLTAYNTLIEYFNEQLKKSIETIKQKHPQAKIVYFDYYNDAKRLYQAPQQYGFTSDKVEVLKACCGGSGPYHHDQYWCGTPNTTVCSDPSKLINWDGPHFTEAAYKQIAKGLIEGPFAYPSLKPAPFKIA