AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene008116

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008116.t1 MTR_3g069520 89.973 369 35 1 1 367 1 369 0.0 680
MS.gene008116.t1 MTR_3g069780 87.668 373 38 4 1 367 1 371 0.0 653
MS.gene008116.t1 MTR_3g438030 87.399 373 39 4 1 367 1 371 0.0 652
MS.gene008116.t1 MTR_3g448360 79.245 371 73 4 1 367 1 371 0.0 595
MS.gene008116.t1 MTR_3g463960 64.767 386 116 6 1 366 2 387 5.23e-180 504
MS.gene008116.t1 MTR_3g463950 64.767 386 116 6 1 366 2 387 5.23e-180 504
MS.gene008116.t1 MTR_3g463970 64.767 386 116 6 1 366 2 387 5.23e-180 504
MS.gene008116.t1 MTR_3g463940 64.767 386 116 6 1 366 2 387 5.23e-180 504
MS.gene008116.t1 MTR_2g079090 66.129 372 106 7 1 366 1 358 1.56e-174 489
MS.gene008116.t1 MTR_0029s0050 66.398 372 105 7 1 366 1 358 1.83e-173 487
MS.gene008116.t1 MTR_2g079080 65.591 372 108 7 1 366 1 358 4.43e-172 483
MS.gene008116.t1 MTR_3g463930 63.198 394 116 9 1 366 2 394 2.18e-171 483
MS.gene008116.t1 MTR_0029s0100 66.129 372 106 7 1 366 1 358 2.52e-171 481
MS.gene008116.t1 MTR_2g043980 58.491 371 134 6 1 367 7 361 1.97e-148 424
MS.gene008116.t1 MTR_2g015650 50.000 376 170 5 3 367 6 374 2.77e-126 368
MS.gene008116.t1 MTR_2g015670 49.020 357 158 7 18 367 21 360 1.81e-111 330
MS.gene008116.t1 MTR_2g015630 44.838 339 171 5 33 360 36 369 8.27e-97 293
MS.gene008116.t1 MTR_2g043990 51.712 292 114 5 1 288 69 337 1.63e-94 285
MS.gene008116.t1 MTR_2g015580 43.768 345 178 6 26 360 45 383 2.82e-93 285
MS.gene008116.t1 MTR_2g015590 43.695 341 179 7 26 357 29 365 2.86e-92 281
MS.gene008116.t1 MTR_3g466240 55.204 221 67 3 99 315 2 194 2.30e-73 226
MS.gene008116.t1 MTR_4g104240 37.026 343 195 11 25 357 36 367 1.09e-68 221
MS.gene008116.t1 MTR_2g015590 43.382 272 145 5 26 289 29 299 4.58e-67 215
MS.gene008116.t1 MTR_3g466190 65.269 167 38 3 53 219 7 153 1.27e-65 207
MS.gene008116.t1 MTR_3g466190 82.051 78 14 0 290 367 152 229 3.82e-38 137
MS.gene008116.t1 MTR_7g087190 30.914 372 225 10 16 367 31 390 6.09e-51 175
MS.gene008116.t1 MTR_7g116870 33.889 360 200 11 26 365 31 372 2.59e-50 173
MS.gene008116.t1 MTR_1g030220 33.239 355 204 10 26 360 38 379 6.10e-49 169
MS.gene008116.t1 MTR_8g028160 33.714 350 205 12 26 357 34 374 1.14e-48 169
MS.gene008116.t1 MTR_1g030340 31.443 388 221 11 4 366 18 385 7.68e-48 167
MS.gene008116.t1 MTR_1g030268 33.333 354 203 10 26 360 38 377 1.95e-47 166
MS.gene008116.t1 MTR_7g111780 31.965 341 205 13 28 359 36 358 4.38e-45 159
MS.gene008116.t1 MTR_1g030230 32.782 363 209 11 18 359 22 370 6.31e-45 159
MS.gene008116.t1 MTR_8g089805 30.423 355 215 9 26 359 38 381 4.72e-44 157
MS.gene008116.t1 MTR_6g007090 32.033 359 212 9 18 359 29 372 6.09e-44 156
MS.gene008116.t1 MTR_7g113860 30.607 379 223 14 3 357 10 372 1.57e-43 155
MS.gene008116.t1 MTR_7g113860 33.149 362 194 16 24 357 25 366 2.75e-43 154
MS.gene008116.t1 MTR_1g030275 33.429 350 206 9 26 359 37 375 2.75e-43 154
MS.gene008116.t1 MTR_7g033150 32.500 400 213 17 1 362 1 381 1.00e-42 153
MS.gene008116.t1 MTR_7g033165 30.791 354 211 8 26 358 31 371 8.39e-42 150
MS.gene008116.t1 MTR_7g033155 30.688 378 215 11 20 362 30 395 2.87e-40 147
MS.gene008116.t1 MTR_6g007095 30.491 387 227 11 1 363 7 375 6.15e-40 150
MS.gene008116.t1 MTR_6g007095 27.688 372 213 13 14 359 349 690 2.22e-29 119
MS.gene008116.t1 MTR_1g082390 29.839 372 222 14 2 350 5 360 1.38e-37 139
MS.gene008116.t1 MTR_8g038680 29.843 382 219 15 3 359 9 366 4.42e-37 137
MS.gene008116.t1 MTR_1g030268 32.364 275 166 6 26 289 38 303 2.98e-35 132
MS.gene008116.t1 MTR_8g022810 30.205 341 189 15 27 346 40 352 6.55e-32 124
MS.gene008116.t1 MTR_8g031420 29.155 367 220 15 2 352 5 347 6.66e-32 123
MS.gene008116.t1 MTR_6g007100 31.143 350 205 15 26 363 31 356 2.31e-31 122
MS.gene008116.t1 MTR_1g030265 30.820 305 176 11 76 359 53 343 1.66e-30 119
MS.gene008116.t1 MTR_7g111780 31.086 267 161 10 100 359 9 259 9.39e-30 115
MS.gene008116.t1 MTR_7g033165 31.034 261 164 4 26 275 31 286 1.94e-29 115
MS.gene008116.t1 MTR_8g031430 29.096 354 211 14 23 359 32 362 7.69e-29 115
MS.gene008116.t1 MTR_1g025780 28.613 346 193 16 28 351 41 354 1.36e-28 114
MS.gene008116.t1 MTR_8g031390 29.070 344 203 14 23 352 32 348 2.06e-28 114
MS.gene008116.t1 MTR_8g014910 28.771 358 216 13 9 350 13 347 2.58e-28 113
MS.gene008116.t1 MTR_8g031400 28.406 345 205 13 23 352 32 349 3.02e-28 113
MS.gene008116.t1 MTR_2g033930 29.315 365 220 14 1 352 8 347 9.10e-28 112
MS.gene008116.t1 MTR_1g025680 28.649 370 215 15 3 351 8 349 2.56e-27 112
MS.gene008116.t1 MTR_4g056280 28.531 354 216 12 11 350 14 344 4.28e-27 110
MS.gene008116.t1 MTR_7g113860 28.990 307 179 13 74 357 8 298 1.90e-26 107
MS.gene008116.t1 MTR_2g015080 29.076 368 209 18 3 345 16 356 2.25e-26 108
MS.gene008116.t1 MTR_2g100620 27.647 340 205 13 28 350 31 346 3.49e-26 107
MS.gene008116.t1 MTR_1g025700 28.152 341 202 14 28 351 50 364 6.29e-26 107
MS.gene008116.t1 MTR_4g056160 28.060 335 212 10 28 350 27 344 1.07e-25 106
MS.gene008116.t1 MTR_8g089805 27.000 300 187 9 81 359 25 313 1.15e-25 105
MS.gene008116.t1 MTR_1g025720 29.674 337 190 14 26 343 35 343 2.58e-25 105
MS.gene008116.t1 MTR_5g022630 28.249 354 219 14 5 345 23 354 3.21e-25 105
MS.gene008116.t1 MTR_1g025910 29.641 334 195 14 33 351 41 349 5.42e-25 104
MS.gene008116.t1 MTR_1g025760 30.029 343 194 15 28 351 80 395 8.35e-25 104
MS.gene008116.t1 MTR_8g012540 28.324 346 213 13 3 330 9 337 1.02e-24 103
MS.gene008116.t1 MTR_3g464730 29.839 372 211 19 1 351 2 344 1.63e-24 103
MS.gene008116.t1 MTR_2g044100 27.809 356 209 16 21 355 36 364 2.58e-24 103
MS.gene008116.t1 MTR_3g052490 29.395 347 207 13 28 358 32 356 4.14e-24 102
MS.gene008116.t1 MTR_3g098270 29.683 347 201 16 26 353 32 354 5.46e-24 102
MS.gene008116.t1 MTR_4g087985 28.409 352 206 16 27 352 35 366 8.23e-24 101
MS.gene008116.t1 MTR_8g031390 29.605 304 177 13 23 316 32 308 1.64e-23 99.8
MS.gene008116.t1 MTR_5g009100 27.893 337 213 11 30 355 48 365 2.18e-23 100
MS.gene008116.t1 MTR_5g022640 26.836 354 229 13 9 351 25 359 3.29e-23 99.8
MS.gene008116.t1 MTR_5g084750 28.116 345 206 13 28 355 30 349 3.42e-23 99.4
MS.gene008116.t1 MTR_5g084790 27.747 364 235 12 2 355 6 351 7.88e-23 98.6
MS.gene008116.t1 MTR_2g033920 28.324 346 201 12 27 352 34 352 4.02e-22 96.7
MS.gene008116.t1 MTR_8g079050 28.496 379 221 18 3 358 15 366 5.02e-22 96.7
MS.gene008116.t1 MTR_4g122200 27.344 384 225 14 1 365 15 363 7.27e-22 95.9
MS.gene008116.t1 MTR_3g005650 27.794 349 203 16 28 357 30 348 1.86e-21 94.7
MS.gene008116.t1 MTR_3g052580 29.024 379 217 18 1 358 4 351 2.24e-21 94.7
MS.gene008116.t1 MTR_3g082830 26.627 338 220 11 28 355 38 357 2.67e-21 94.4
MS.gene008116.t1 MTR_3g052580 29.024 379 217 18 1 358 3 350 2.79e-21 94.7
MS.gene008116.t1 MTR_5g078210 26.627 338 208 14 32 354 29 341 3.03e-21 94.0
MS.gene008116.t1 MTR_1g060490 27.545 334 196 16 25 345 34 334 3.50e-21 93.6
MS.gene008116.t1 MTR_5g084770 28.775 351 203 15 19 350 21 343 4.28e-21 93.6
MS.gene008116.t1 MTR_3g114090 29.155 367 217 17 4 351 9 351 9.30e-21 92.4
MS.gene008116.t1 MTR_1g024890 27.642 369 225 16 10 357 8 355 2.32e-20 91.7
MS.gene008116.t1 MTR_7g116510 28.453 362 223 16 9 356 7 346 2.65e-20 91.3
MS.gene008116.t1 MTR_3g052480 29.683 347 203 16 28 356 33 356 2.81e-20 91.3
MS.gene008116.t1 MTR_1g069175 26.901 342 212 13 27 352 32 351 3.16e-20 91.3
MS.gene008116.t1 MTR_5g074270 26.331 357 225 17 9 347 10 346 3.51e-20 90.9
MS.gene008116.t1 MTR_4g035353 25.538 372 234 16 4 357 8 354 8.10e-20 90.1
MS.gene008116.t1 MTR_7g116520 26.571 350 213 16 27 357 33 357 2.11e-19 89.0
MS.gene008116.t1 MTR_8g022790 24.451 364 227 10 5 352 14 345 3.22e-19 88.2
MS.gene008116.t1 MTR_3g023220 27.190 331 184 15 29 341 34 325 4.67e-19 87.8
MS.gene008116.t1 MTR_5g078210 26.748 329 189 13 32 347 29 318 7.12e-19 86.7
MS.gene008116.t1 MTR_0009s0250 26.087 322 194 13 28 331 33 328 7.69e-19 87.0
MS.gene008116.t1 MTR_5g083040 26.724 348 215 15 28 356 32 358 9.86e-19 86.7
MS.gene008116.t1 MTR_3g005660 27.410 332 208 16 30 347 38 350 1.30e-18 86.7
MS.gene008116.t1 MTR_1g060500 28.242 347 193 17 25 349 37 349 1.92e-18 85.9
MS.gene008116.t1 MTR_0565s0010 24.405 336 210 14 30 347 34 343 4.06e-18 85.1
MS.gene008116.t1 MTR_7g116570 24.523 367 242 13 3 356 10 354 4.31e-18 85.1
MS.gene008116.t1 MTR_8g087890 26.190 336 203 15 30 347 33 341 7.54e-18 84.3
MS.gene008116.t1 MTR_2g084585 25.672 335 217 12 28 350 30 344 7.67e-18 84.0
MS.gene008116.t1 MTR_8g075200 26.893 383 220 17 1 351 2 356 8.43e-18 84.3
MS.gene008116.t1 MTR_4g108690 25.882 340 208 13 30 351 29 342 1.91e-17 83.2
MS.gene008116.t1 MTR_4g019880 26.685 371 228 17 2 356 12 354 2.05e-17 83.2
MS.gene008116.t1 MTR_8g075220 25.364 343 219 13 26 351 38 360 2.12e-17 82.8
MS.gene008116.t1 MTR_3g435540 26.039 361 216 14 30 363 25 361 3.94e-17 82.0
MS.gene008116.t1 MTR_7g116500 26.741 359 221 15 15 356 20 353 1.48e-16 80.5
MS.gene008116.t1 MTR_3g114120 26.531 343 195 17 28 346 47 356 1.68e-16 80.5
MS.gene008116.t1 MTR_8g022810 32.057 209 107 10 27 217 40 231 3.06e-16 79.0
MS.gene008116.t1 MTR_6g021530 26.087 368 233 18 4 356 7 350 1.82e-15 77.4
MS.gene008116.t1 MTR_5g093090 25.995 377 222 14 4 358 11 352 2.92e-15 76.6
MS.gene008116.t1 MTR_1g092750 23.385 325 214 9 29 345 41 338 3.08e-15 76.6
MS.gene008116.t1 MTR_1g079530 26.957 345 200 16 27 352 28 339 1.20e-14 74.7
MS.gene008116.t1 MTR_3g021460 24.000 375 222 14 1 352 1 335 1.25e-14 74.7
MS.gene008116.t1 MTR_2g033920 27.402 281 167 10 27 289 34 295 1.91e-14 73.6
MS.gene008116.t1 MTR_7g104220 25.519 337 200 16 29 349 43 344 3.59e-13 70.5
MS.gene008116.t1 MTR_8g087870 27.586 348 198 18 29 357 30 342 4.75e-13 70.1
MS.gene008116.t1 MTR_8g074570 25.581 344 210 13 29 352 39 356 5.48e-13 69.7
MS.gene008116.t1 MTR_2g017965 25.356 351 208 19 29 357 34 352 1.22e-12 68.9
MS.gene008116.t1 MTR_3g024510 23.881 335 212 14 30 347 40 348 2.40e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008116.t1 AT5G45910 44.709 378 181 11 1 358 1 370 1.35e-104 312
MS.gene008116.t1 AT1G28610 43.109 341 180 6 27 358 30 365 1.33e-91 280
MS.gene008116.t1 AT1G28580 39.510 367 207 7 1 357 10 371 4.47e-88 271
MS.gene008116.t1 AT1G28570 42.398 342 182 7 26 357 32 368 4.58e-87 268
MS.gene008116.t1 AT2G27360 41.691 343 184 8 26 357 31 368 6.74e-87 268
MS.gene008116.t1 AT1G31550 41.983 343 181 9 26 357 34 369 6.17e-86 266
MS.gene008116.t1 AT1G28590 40.580 345 190 7 26 360 34 373 1.21e-85 265
MS.gene008116.t1 AT1G28600 40.164 366 199 9 3 357 8 364 3.60e-85 263
MS.gene008116.t1 AT1G31550 41.691 343 179 10 26 357 34 366 1.18e-82 257
MS.gene008116.t1 AT1G28670 39.714 350 185 9 26 359 33 372 1.15e-79 249
MS.gene008116.t1 AT1G28660 40.286 350 182 10 26 359 33 371 1.99e-79 248
MS.gene008116.t1 AT1G28640 39.017 346 192 7 26 359 33 371 7.51e-79 247
MS.gene008116.t1 AT1G28660 40.286 350 181 11 26 359 33 370 8.78e-78 244
MS.gene008116.t1 AT1G28650 38.905 347 191 8 26 359 35 373 7.09e-77 242
MS.gene008116.t1 AT1G28580 39.175 291 168 5 71 357 5 290 6.82e-69 219
MS.gene008116.t1 AT3G48460 36.232 345 197 9 25 357 35 368 1.12e-62 205
MS.gene008116.t1 AT5G03980 32.578 353 183 10 1 349 9 310 8.44e-53 178
MS.gene008116.t1 AT1G28570 42.453 212 115 4 150 357 88 296 2.74e-51 174
MS.gene008116.t1 AT1G28570 42.788 208 112 4 154 357 1 205 6.20e-51 170
MS.gene008116.t1 AT4G01130 32.394 355 203 10 26 357 32 372 9.25e-51 174
MS.gene008116.t1 AT1G54790 32.723 382 206 15 3 357 12 369 2.58e-45 160
MS.gene008116.t1 AT1G56670 31.356 354 200 14 28 364 40 367 2.69e-45 159
MS.gene008116.t1 AT5G14450 30.971 381 223 13 3 363 21 381 4.69e-44 157
MS.gene008116.t1 AT1G67830 31.092 357 208 11 19 349 21 365 9.75e-44 155
MS.gene008116.t1 AT1G54790 33.075 387 205 18 1 357 6 368 8.97e-43 153
MS.gene008116.t1 AT3G05180 32.286 350 205 12 26 355 34 371 9.86e-42 150
MS.gene008116.t1 AT3G62280 30.484 351 214 12 16 357 28 357 9.05e-41 147
MS.gene008116.t1 AT1G09390 31.232 349 207 13 28 364 37 364 1.56e-40 147
MS.gene008116.t1 AT3G26430 29.915 351 222 7 26 359 29 372 2.86e-40 146
MS.gene008116.t1 AT1G54790 31.296 409 209 19 1 357 6 394 2.60e-39 144
MS.gene008116.t1 AT1G28600 39.130 207 111 6 3 200 8 208 1.78e-37 134
MS.gene008116.t1 AT1G28610 40.323 186 102 3 27 205 30 213 1.20e-36 133
MS.gene008116.t1 AT4G01130 31.769 277 166 6 26 289 32 298 4.62e-35 131
MS.gene008116.t1 AT1G71120 29.204 339 199 11 28 352 31 342 1.71e-31 122
MS.gene008116.t1 AT3G27950 28.857 350 218 9 26 359 30 364 4.52e-31 121
MS.gene008116.t1 AT1G73610 28.358 335 199 12 27 351 34 337 1.89e-30 119
MS.gene008116.t1 AT1G56670 30.576 278 157 11 28 289 40 297 6.20e-30 117
MS.gene008116.t1 AT1G06990 28.818 347 220 13 18 354 27 356 1.03e-29 117
MS.gene008116.t1 AT2G40250 27.485 342 217 12 19 346 26 350 1.49e-28 114
MS.gene008116.t1 AT1G23500 27.679 336 203 13 27 352 34 339 1.98e-28 114
MS.gene008116.t1 AT4G10950 28.655 342 211 13 24 352 66 387 3.22e-28 114
MS.gene008116.t1 AT1G20120 29.859 355 192 16 26 354 76 399 9.20e-28 113
MS.gene008116.t1 AT1G53920 29.917 361 201 17 28 366 48 378 1.18e-27 112
MS.gene008116.t1 AT3G14225 28.902 346 202 15 28 353 37 358 1.22e-27 112
MS.gene008116.t1 AT1G53940 31.304 345 195 15 28 353 39 360 1.40e-27 112
MS.gene008116.t1 AT5G45950 28.869 336 199 13 28 350 40 348 1.56e-27 111
MS.gene008116.t1 AT1G20132 28.198 344 199 14 28 351 61 376 1.82e-27 112
MS.gene008116.t1 AT3G14225 29.226 349 201 16 28 353 37 362 3.31e-27 111
MS.gene008116.t1 AT4G01130 27.333 300 181 10 81 357 1 286 7.63e-27 108
MS.gene008116.t1 AT5G40990 28.997 369 222 14 4 353 11 358 3.29e-26 108
MS.gene008116.t1 AT1G75880 28.743 334 210 13 28 351 52 367 6.09e-26 107
MS.gene008116.t1 AT3G16370 28.531 354 212 14 18 355 22 350 7.17e-26 107
MS.gene008116.t1 AT4G10950 28.363 342 208 14 24 352 66 383 1.83e-25 106
MS.gene008116.t1 AT1G75880 29.167 336 207 14 28 351 52 368 3.59e-25 105
MS.gene008116.t1 AT5G63170 26.911 327 195 12 28 342 28 322 5.40e-25 104
MS.gene008116.t1 AT1G75920 27.123 365 218 13 1 351 6 336 9.02e-25 103
MS.gene008116.t1 AT2G31540 27.100 369 235 13 1 354 9 358 2.01e-24 103
MS.gene008116.t1 AT2G42990 29.003 331 203 13 28 346 28 338 2.56e-24 102
MS.gene008116.t1 AT4G26790 26.923 338 215 13 26 351 27 344 3.32e-24 102
MS.gene008116.t1 AT4G26790 26.923 338 215 13 26 351 27 344 3.32e-24 102
MS.gene008116.t1 AT3G62280 29.057 265 164 9 19 276 31 278 1.16e-23 99.8
MS.gene008116.t1 AT5G42170 28.614 339 199 15 28 350 50 361 1.21e-23 100
MS.gene008116.t1 AT1G75890 27.139 339 210 14 28 351 47 363 1.28e-23 100
MS.gene008116.t1 AT2G30310 27.778 360 223 15 3 346 8 346 2.15e-23 100
MS.gene008116.t1 AT1G75890 27.139 339 210 14 28 351 76 392 2.78e-23 100
MS.gene008116.t1 AT1G75890 27.794 349 208 15 28 351 47 376 4.04e-23 99.8
MS.gene008116.t1 AT1G75900 27.410 332 214 12 28 350 43 356 4.73e-23 99.4
MS.gene008116.t1 AT1G20130 28.080 349 200 14 28 351 204 526 5.13e-23 100
MS.gene008116.t1 AT1G20130 28.080 349 200 14 28 351 184 506 6.92e-23 100
MS.gene008116.t1 AT2G04570 27.596 366 224 16 5 356 10 348 9.43e-23 98.2
MS.gene008116.t1 AT4G28780 28.226 372 230 16 1 356 1 351 1.50e-22 97.8
MS.gene008116.t1 AT1G75910 25.948 343 205 15 26 351 26 336 2.85e-22 96.7
MS.gene008116.t1 AT5G45960 25.731 342 210 14 28 349 47 364 2.99e-22 97.1
MS.gene008116.t1 AT5G22810 27.322 366 228 15 1 350 8 351 4.71e-22 96.3
MS.gene008116.t1 AT2G03980 28.528 326 203 12 26 341 41 346 5.68e-22 96.3
MS.gene008116.t1 AT2G03980 28.528 326 203 12 26 341 41 346 5.68e-22 96.3
MS.gene008116.t1 AT2G03980 28.528 326 203 12 26 341 41 346 5.68e-22 96.3
MS.gene008116.t1 AT2G03980 28.528 326 203 12 26 341 41 346 5.68e-22 96.3
MS.gene008116.t1 AT3G04290 28.280 343 212 13 27 356 28 349 6.32e-22 96.3
MS.gene008116.t1 AT5G03820 26.016 369 231 16 1 350 4 349 6.40e-22 95.9
MS.gene008116.t1 AT1G75930 27.515 338 203 14 26 350 27 335 1.02e-21 95.1
MS.gene008116.t1 AT5G03820 25.745 369 232 15 1 350 32 377 1.03e-21 95.9
MS.gene008116.t1 AT1G59406 28.184 369 220 17 1 351 1 342 1.18e-21 95.1
MS.gene008116.t1 AT1G59030 28.184 369 220 17 1 351 1 342 1.18e-21 95.1
MS.gene008116.t1 AT1G58725 28.184 369 220 17 1 351 1 342 1.18e-21 95.1
MS.gene008116.t1 AT1G20135 24.793 363 208 13 3 345 9 326 2.19e-21 94.0
MS.gene008116.t1 AT1G71250 26.301 346 217 13 28 357 41 364 2.75e-21 94.4
MS.gene008116.t1 AT1G75920 26.316 380 217 14 1 351 1 346 3.23e-21 94.0
MS.gene008116.t1 AT1G54000 26.549 339 202 13 25 349 33 338 4.09e-21 94.0
MS.gene008116.t1 AT5G15720 27.381 336 204 13 28 346 30 342 4.22e-21 93.6
MS.gene008116.t1 AT1G58430 25.691 362 232 15 3 349 11 350 6.08e-21 93.2
MS.gene008116.t1 AT5G08460 28.614 339 190 16 26 340 47 357 7.96e-21 93.2
MS.gene008116.t1 AT1G53990 26.287 369 227 15 3 353 8 349 9.45e-21 92.8
MS.gene008116.t1 AT2G30220 26.519 362 224 13 3 346 8 345 1.01e-20 92.4
MS.gene008116.t1 AT2G23540 30.372 349 194 18 28 352 48 371 1.31e-20 92.4
MS.gene008116.t1 AT3G14210 27.697 343 197 15 24 349 32 340 1.86e-20 92.0
MS.gene008116.t1 AT1G54010 26.946 334 193 15 24 341 32 330 2.56e-20 91.7
MS.gene008116.t1 AT1G53940 31.408 277 159 11 27 289 38 297 6.41e-20 89.4
MS.gene008116.t1 AT3G09930 26.979 341 206 12 19 345 30 341 1.88e-19 89.0
MS.gene008116.t1 AT3G09930 26.979 341 206 12 19 345 30 341 1.88e-19 89.0
MS.gene008116.t1 AT5G33370 25.948 343 220 13 27 356 29 350 2.26e-19 89.0
MS.gene008116.t1 AT1G29670 27.795 331 203 16 30 347 34 341 2.89e-19 88.6
MS.gene008116.t1 AT1G58520 26.923 338 201 13 28 351 30 335 6.12e-19 87.4
MS.gene008116.t1 AT1G58525 26.923 338 201 13 28 351 30 335 6.12e-19 87.4
MS.gene008116.t1 AT5G18430 25.217 345 222 12 27 356 27 350 7.25e-19 87.4
MS.gene008116.t1 AT1G29670 28.097 331 202 16 30 347 102 409 7.36e-19 87.8
MS.gene008116.t1 AT2G24560 25.135 370 246 13 4 360 9 360 9.56e-19 87.0
MS.gene008116.t1 AT1G71691 27.405 343 213 13 28 357 55 374 1.12e-17 84.0
MS.gene008116.t1 AT2G19010 26.393 341 205 13 30 357 32 339 1.12e-17 83.6
MS.gene008116.t1 AT5G03610 24.302 358 234 11 5 351 19 350 2.05e-17 83.2
MS.gene008116.t1 AT2G19010 26.393 341 205 13 30 357 62 369 2.14e-17 83.2
MS.gene008116.t1 AT5G37690 23.626 364 234 15 4 349 1 338 2.88e-17 82.4
MS.gene008116.t1 AT2G19050 26.149 348 197 14 30 355 33 342 3.01e-17 82.4
MS.gene008116.t1 AT5G41890 27.299 348 207 15 30 352 33 359 1.29e-16 80.9
MS.gene008116.t1 AT2G19060 26.648 349 196 15 30 355 32 343 2.00e-16 80.1
MS.gene008116.t1 AT1G33811 26.149 348 217 17 29 357 35 361 2.17e-16 80.1
MS.gene008116.t1 AT1G74460 25.816 337 212 13 30 351 25 338 4.60e-16 79.0
MS.gene008116.t1 AT1G29660 26.554 354 210 18 14 347 19 342 4.93e-16 79.0
MS.gene008116.t1 AT5G15720 26.642 274 178 9 28 289 30 292 7.14e-16 77.8
MS.gene008116.t1 AT3G53100 24.551 334 222 12 28 350 29 343 9.22e-16 78.2
MS.gene008116.t1 AT3G14220 23.529 340 209 14 29 352 33 337 1.29e-15 77.8
MS.gene008116.t1 AT1G75920 25.549 364 194 13 1 351 6 305 1.31e-15 77.0
MS.gene008116.t1 AT5G55050 26.966 356 205 17 29 358 40 366 5.12e-15 76.3
MS.gene008116.t1 AT2G36325 25.075 335 207 13 29 350 48 351 8.83e-15 75.1
MS.gene008116.t1 AT1G71691 28.794 257 156 9 28 273 55 295 1.19e-14 74.3
MS.gene008116.t1 AT4G30140 25.513 341 206 14 30 357 35 340 1.59e-14 74.3
MS.gene008116.t1 AT5G03600 24.179 335 208 10 22 345 8 307 1.75e-14 73.9
MS.gene008116.t1 AT5G03600 24.179 335 208 10 22 345 43 342 3.92e-14 73.2
MS.gene008116.t1 AT2G24560 25.649 308 204 12 4 298 9 304 2.10e-13 70.9
MS.gene008116.t1 AT5G15720 25.952 289 172 12 75 346 48 311 8.48e-13 68.9
MS.gene008116.t1 AT5G37690 23.653 334 205 15 32 349 31 330 2.07e-12 68.2
MS.gene008116.t1 AT2G04020 30.093 216 126 10 26 228 41 244 3.06e-12 66.6
MS.gene008116.t1 AT1G54030 22.561 328 207 12 27 345 51 340 4.58e-12 67.4
MS.gene008116.t1 AT3G43550 26.449 276 170 11 28 289 30 286 1.09e-11 65.5
MS.gene008116.t1 AT2G04020 30.660 212 122 10 26 224 41 240 1.59e-11 65.1
MS.gene008116.t1 AT2G31550 27.485 171 109 6 187 354 59 217 2.84e-11 63.2

Find 69 sgRNAs with CRISPR-Local

Find 106 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTTCAAAACTAATAAAT+TGG 0.141859 3.3:-60842489 MS.gene008116:CDS
TTCTTTGGTGTTACACAATA+AGG 0.159526 3.3:+60843394 None:intergenic
AAAGAAGACTATGATGAATT+TGG 0.241383 3.3:-60842878 MS.gene008116:CDS
TCGCAGTTCTGAAATAGTTT+TGG 0.269806 3.3:+60843198 None:intergenic
AGTTAGGACAAAACCTTCTT+TGG 0.290406 3.3:+60843379 None:intergenic
TATCAAGCACCACAACAATT+TGG 0.294441 3.3:-60842722 MS.gene008116:intron
CCCAGAGATATGGGTCCTTA+TGG 0.303014 3.3:-60843897 MS.gene008116:CDS
ATTTGATTACCCCAGAGATA+TGG 0.312920 3.3:-60843907 MS.gene008116:CDS
CATTAAATGTGCAATTTGAT+TGG 0.321915 3.3:-60843433 MS.gene008116:CDS
GGTGATTCTGTAAGTGATAC+TGG 0.340202 3.3:-60843939 MS.gene008116:CDS
TATGAAGCCATCTTCAACTT+TGG 0.350482 3.3:-60843960 MS.gene008116:CDS
TTTAATGAGTTATCTTTCTC+TGG 0.377478 3.3:+60843449 None:intergenic
GCGAGAGATAGTTCCCTTGA+TGG 0.382382 3.3:-60843179 MS.gene008116:CDS
GCGGTAGAGTTAGTGGTTCC+AGG 0.391216 3.3:-60842956 MS.gene008116:CDS
TCTTTGGTGTTACACAATAA+GGG 0.393980 3.3:+60843395 None:intergenic
AAATACTGATCATGATGATA+TGG 0.398824 3.3:+60842544 None:intergenic
TATTTGCTTATAAGCGGCTT+CGG 0.415948 3.3:+60842450 None:intergenic
AGTTATCTTTCTCTGGTGTA+AGG 0.416314 3.3:+60843456 None:intergenic
CGACTAATCATAGACTTCAT+AGG 0.419613 3.3:-60843831 MS.gene008116:intron
TTTGATTACCCCAGAGATAT+GGG 0.419732 3.3:-60843906 MS.gene008116:CDS
AGAAGGAGCGGTAGAGTTAG+TGG 0.422002 3.3:-60842963 MS.gene008116:CDS
TTGTTTATAGTGGGAGAGAT+TGG 0.429569 3.3:-60843247 MS.gene008116:CDS
GAAGAGAATGAAGATCTTCA+TGG 0.431779 3.3:+60844037 None:intergenic
TAAACTATCTTGAAAGGAGC+AGG 0.432894 3.3:+60842382 None:intergenic
TCCTTCAAAACTAATAAATT+GGG 0.433608 3.3:-60842488 MS.gene008116:CDS
GATGCCAAGTGCAGTTGAAC+CGG 0.439072 3.3:+60843502 None:intergenic
AATATACTATCTTAGCTTGT+GGG 0.439870 3.3:+60842774 None:intergenic
ACCATAAGGACCCATATCTC+TGG 0.443546 3.3:+60843896 None:intergenic
TTTAGAGAAGGATATGCAAA+AGG 0.444049 3.3:+60842406 None:intergenic
TTAACTGTAGCTGAGGCATA+TGG 0.452881 3.3:-60843602 MS.gene008116:intron
ATAGCTAAAGGTTTAATTGA+AGG 0.457396 3.3:-60842430 MS.gene008116:CDS
TATCAGGCTTTAATTGAAGA+AGG 0.458250 3.3:-60842980 MS.gene008116:intron
TTCGGTATCACCTTTGCATG+TGG 0.460520 3.3:-60844017 MS.gene008116:CDS
ATGAAGATCTTCATTCTCTT+CGG 0.462847 3.3:-60844035 MS.gene008116:CDS
GCATCGGGACGCATGTCAAA+TGG 0.472663 3.3:-60843855 MS.gene008116:CDS
TTAAAGTACGTTGAACCATA+AGG 0.472963 3.3:+60843882 None:intergenic
ATCAAATATTTCAGTGGTAG+TGG 0.479428 3.3:-60843482 MS.gene008116:CDS
TTTGATGGAATCAACCATCA+AGG 0.490593 3.3:+60843165 None:intergenic
AACGTACTTTAAACATGCAT+CGG 0.490676 3.3:-60843871 MS.gene008116:CDS
AGAATCACCAAAGTTGAAGA+TGG 0.494636 3.3:+60843953 None:intergenic
CACCCCATTGGAAAGTTCCC+TGG 0.497541 3.3:+60842938 None:intergenic
GCTTATAAGCAAATAGCTAA+AGG 0.500430 3.3:-60842442 MS.gene008116:CDS
TTATTGTGTAACACCAAAGA+AGG 0.504644 3.3:-60843392 MS.gene008116:intron
AAAGCATGTTGTGGAGGAAG+TGG 0.510426 3.3:-60842568 MS.gene008116:CDS
ACGTACTTTAAACATGCATC+GGG 0.510518 3.3:-60843870 MS.gene008116:CDS
GTTCCAGGGAACTTTCCAAT+GGG 0.514992 3.3:-60842941 MS.gene008116:CDS
TTTATAGTGGGAGAGATTGG+TGG 0.518109 3.3:-60843244 MS.gene008116:CDS
TCGGTATCACCTTTGCATGT+GGG 0.528680 3.3:-60844016 MS.gene008116:CDS
TTTAGCTATTTGCTTATAAG+CGG 0.529705 3.3:+60842444 None:intergenic
CCATAAGGACCCATATCTCT+GGG 0.530553 3.3:+60843897 None:intergenic
TTGATGGAATCAACCATCAA+GGG 0.536692 3.3:+60843166 None:intergenic
TGATTCTAAACTATCTTGAA+AGG 0.547988 3.3:+60842376 None:intergenic
GAAATTTAGCCCACATGCAA+AGG 0.549044 3.3:+60844007 None:intergenic
AAATATACTATCTTAGCTTG+TGG 0.550904 3.3:+60842773 None:intergenic
AAGATGGCTTCATACGGTAG+AGG 0.556476 3.3:+60843969 None:intergenic
TTGGTGACATTCTTATAGGC+CGG 0.562861 3.3:+60843566 None:intergenic
GGTTCCAGGGAACTTTCCAA+TGG 0.563863 3.3:-60842942 MS.gene008116:CDS
CGGTAGAGTTAGTGGTTCCA+GGG 0.577023 3.3:-60842955 MS.gene008116:CDS
TTAGAGAAGGATATGCAAAA+GGG 0.585091 3.3:+60842407 None:intergenic
TATGCCGGTTCAACTGCACT+TGG 0.594009 3.3:-60843506 MS.gene008116:CDS
GGCTTTAATTGAAGAAGGAG+CGG 0.599772 3.3:-60842975 MS.gene008116:CDS
ATGTCAGTATTACACCCCAT+TGG 0.600994 3.3:+60842926 None:intergenic
AAGTTGAAGATGGCTTCATA+CGG 0.604507 3.3:+60843963 None:intergenic
CTCCACCCACCAAATTGTTG+TGG 0.605350 3.3:+60842713 None:intergenic
CTTGGCATCAAATATTTCAG+TGG 0.611650 3.3:-60843488 MS.gene008116:CDS
TCAAAACTAATAAATTGGGA+TGG 0.614495 3.3:-60842484 MS.gene008116:CDS
AAGAATGTCACCAAAACCCA+TGG 0.619842 3.3:-60843557 MS.gene008116:CDS
TTCCAGGGAACTTTCCAATG+GGG 0.642288 3.3:-60842940 MS.gene008116:CDS
CATAAGGACCCATATCTCTG+GGG 0.759622 3.3:+60843898 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTTAATTATGTTTATC+AGG - chr3.3:60843420-60843439 MS.gene008116:CDS 10.0%
!! AAAAAATCATTGTTTATAGT+GGG - chr3.3:60843160-60843179 MS.gene008116:CDS 15.0%
!! TATCAAATAAATAACAATCT+TGG - chr3.3:60843381-60843400 MS.gene008116:intron 15.0%
!!! AGTAATTAAATTTTGAGTAT+TGG - chr3.3:60843305-60843324 MS.gene008116:intron 15.0%
!!! TTATTTTTGTATTCATGAAA+TGG - chr3.3:60842641-60842660 MS.gene008116:intron 15.0%
!! AAATCAATGAAAACTTAACA+TGG + chr3.3:60843743-60843762 None:intergenic 20.0%
!! AATGAACATAAATTAATGCA+TGG + chr3.3:60843789-60843808 None:intergenic 20.0%
!! ATCCTTCAAAACTAATAAAT+TGG - chr3.3:60843927-60843946 MS.gene008116:CDS 20.0%
!! ATGAACATAAATTAATGCAT+GGG + chr3.3:60843788-60843807 None:intergenic 20.0%
!! CAAAAAATCATTGTTTATAG+TGG - chr3.3:60843159-60843178 MS.gene008116:CDS 20.0%
!! TCCTTCAAAACTAATAAATT+GGG - chr3.3:60843928-60843947 MS.gene008116:CDS 20.0%
!!! AATTATTGTGTTTGAGTTAT+AGG - chr3.3:60843355-60843374 MS.gene008116:intron 20.0%
!!! ATAGATTATTTTAGAGTTCT+TGG + chr3.3:60842711-60842730 None:intergenic 20.0%
! AAAGAAGACTATGATGAATT+TGG - chr3.3:60843538-60843557 MS.gene008116:CDS 25.0%
! AAATACTGATCATGATGATA+TGG + chr3.3:60843875-60843894 None:intergenic 25.0%
! AGAAACAAAAGAATGTGTAA+AGG + chr3.3:60842613-60842632 None:intergenic 25.0%
! ATAGCTAAAGGTTTAATTGA+AGG - chr3.3:60843986-60844005 MS.gene008116:CDS 25.0%
! CATTAAATGTGCAATTTGAT+TGG - chr3.3:60842983-60843002 MS.gene008116:intron 25.0%
! TCAAAACTAATAAATTGGGA+TGG - chr3.3:60843932-60843951 MS.gene008116:CDS 25.0%
! TTTAATGAGTTATCTTTCTC+TGG + chr3.3:60842970-60842989 None:intergenic 25.0%
! TTTAGCTATTTGCTTATAAG+CGG + chr3.3:60843975-60843994 None:intergenic 25.0%
! TTTATGTTCATTAATGATGC+AGG - chr3.3:60843797-60843816 MS.gene008116:intron 25.0%
!! AAATATACTATCTTAGCTTG+TGG + chr3.3:60843646-60843665 None:intergenic 25.0%
!!! AAGTTTTGTATAACATACAG+TGG + chr3.3:60843284-60843303 None:intergenic 25.0%
!!! AATATACTATCTTAGCTTGT+GGG + chr3.3:60843645-60843664 None:intergenic 25.0%
!!! ATTATTTTAGAGTTCTTGGT+AGG + chr3.3:60842707-60842726 None:intergenic 25.0%
!!! TCCCAATTTATTAGTTTTGA+AGG + chr3.3:60843932-60843951 None:intergenic 25.0%
!!! TTTCTGTTTTATTGTCTCTA+TGG + chr3.3:60843620-60843639 None:intergenic 25.0%
AACCCATGGTGATATAAAAA+AGG - chr3.3:60842873-60842892 MS.gene008116:CDS 30.0%
AACGTACTTTAAACATGCAT+CGG - chr3.3:60842545-60842564 MS.gene008116:CDS 30.0%
ACCCATGGTGATATAAAAAA+GGG - chr3.3:60842874-60842893 MS.gene008116:CDS 30.0%
ATCAAATATTTCAGTGGTAG+TGG - chr3.3:60842934-60842953 MS.gene008116:CDS 30.0%
ATGAAGATCTTCATTCTCTT+CGG - chr3.3:60842381-60842400 MS.gene008116:CDS 30.0%
GCTTATAAGCAAATAGCTAA+AGG - chr3.3:60843974-60843993 MS.gene008116:CDS 30.0%
TTAAAGTACGTTGAACCATA+AGG + chr3.3:60842537-60842556 None:intergenic 30.0%
TTAGAGAAGGATATGCAAAA+GGG + chr3.3:60844012-60844031 None:intergenic 30.0%
TTATTGTGTAACACCAAAGA+AGG - chr3.3:60843024-60843043 MS.gene008116:intron 30.0%
TTTAGAGAAGGATATGCAAA+AGG + chr3.3:60844013-60844032 None:intergenic 30.0%
! TATCAGGCTTTAATTGAAGA+AGG - chr3.3:60843436-60843455 MS.gene008116:CDS 30.0%
! TTTTATATCACCATGGGTTT+TGG + chr3.3:60842872-60842891 None:intergenic 30.0%
! TTTTGTATAACATACAGTGG+TGG + chr3.3:60843281-60843300 None:intergenic 30.0%
!! CATCATGATCAGTATTTTTG+TGG - chr3.3:60843878-60843897 MS.gene008116:CDS 30.0%
!! TCTTTGGTGTTACACAATAA+GGG + chr3.3:60843024-60843043 None:intergenic 30.0%
!! TTCTTTGGTGTTACACAATA+AGG + chr3.3:60843025-60843044 None:intergenic 30.0%
!!! ATATGGTTTGCCATTTTTAC+CGG - chr3.3:60842831-60842850 MS.gene008116:CDS 30.0%
!!! CTGAAATAGTTTTGGAAAGA+TGG + chr3.3:60843213-60843232 None:intergenic 30.0%
!!! TCCCTTTTTTATATCACCAT+GGG + chr3.3:60842878-60842897 None:intergenic 30.0%
AAGTTGAAGATGGCTTCATA+CGG + chr3.3:60842456-60842475 None:intergenic 35.0%
ACACAAATTAGTAGCAAGCA+AGG + chr3.3:60843063-60843082 None:intergenic 35.0%
ACGTACTTTAAACATGCATC+GGG - chr3.3:60842546-60842565 MS.gene008116:CDS 35.0%
AGAATCACCAAAGTTGAAGA+TGG + chr3.3:60842466-60842485 None:intergenic 35.0%
AGTTAGGACAAAACCTTCTT+TGG + chr3.3:60843040-60843059 None:intergenic 35.0%
AGTTATCTTTCTCTGGTGTA+AGG + chr3.3:60842963-60842982 None:intergenic 35.0%
ATTTGATTACCCCAGAGATA+TGG - chr3.3:60842509-60842528 MS.gene008116:CDS 35.0%
CGACTAATCATAGACTTCAT+AGG - chr3.3:60842585-60842604 MS.gene008116:CDS 35.0%
CTTGGCATCAAATATTTCAG+TGG - chr3.3:60842928-60842947 MS.gene008116:CDS 35.0%
TAAACTATCTTGAAAGGAGC+AGG + chr3.3:60844037-60844056 None:intergenic 35.0%
TATCAAGCACCACAACAATT+TGG - chr3.3:60843694-60843713 MS.gene008116:intron 35.0%
TATGAAGCCATCTTCAACTT+TGG - chr3.3:60842456-60842475 MS.gene008116:CDS 35.0%
TATTTGCTTATAAGCGGCTT+CGG + chr3.3:60843969-60843988 None:intergenic 35.0%
TTCTTATAGGCCGGTAAAAA+TGG + chr3.3:60842844-60842863 None:intergenic 35.0%
TTGATGGAATCAACCATCAA+GGG + chr3.3:60843253-60843272 None:intergenic 35.0%
TTTGATGGAATCAACCATCA+AGG + chr3.3:60843254-60843273 None:intergenic 35.0%
TTTGATTACCCCAGAGATAT+GGG - chr3.3:60842510-60842529 MS.gene008116:CDS 35.0%
! GGAGTTAATTTTGCTTATGC+CGG - chr3.3:60842895-60842914 MS.gene008116:CDS 35.0%
! TTGTTTATAGTGGGAGAGAT+TGG - chr3.3:60843169-60843188 MS.gene008116:CDS 35.0%
!! ATTTTGAAAGCATGTTGTGG+AGG - chr3.3:60843842-60843861 MS.gene008116:CDS 35.0%
!! GAGATTTTGAAAGCATGTTG+TGG - chr3.3:60843839-60843858 MS.gene008116:CDS 35.0%
!! GGTTTTGGTGACATTCTTAT+AGG + chr3.3:60842857-60842876 None:intergenic 35.0%
!! TACAGTGGTGGTATTTTTGA+TGG + chr3.3:60843269-60843288 None:intergenic 35.0%
!!! CTCCCTTTTTTATATCACCA+TGG + chr3.3:60842879-60842898 None:intergenic 35.0%
!!! TCGCAGTTCTGAAATAGTTT+TGG + chr3.3:60843221-60843240 None:intergenic 35.0%
AAGAATGTCACCAAAACCCA+TGG - chr3.3:60842859-60842878 MS.gene008116:CDS 40.0%
AAGCACCACAACAATTTGGT+GGG - chr3.3:60843698-60843717 MS.gene008116:intron 40.0%
ATGTCAGTATTACACCCCAT+TGG + chr3.3:60843493-60843512 None:intergenic 40.0%
GAAATTTAGCCCACATGCAA+AGG + chr3.3:60842412-60842431 None:intergenic 40.0%
GGTGATTCTGTAAGTGATAC+TGG - chr3.3:60842477-60842496 MS.gene008116:CDS 40.0%
TCTCATGTTAACTGTAGCTG+AGG - chr3.3:60842807-60842826 MS.gene008116:CDS 40.0%
TTAACTGTAGCTGAGGCATA+TGG - chr3.3:60842814-60842833 MS.gene008116:CDS 40.0%
TTAGTAGCAAGCAAGGAGTT+AGG + chr3.3:60843056-60843075 None:intergenic 40.0%
! GGCTTTAATTGAAGAAGGAG+CGG - chr3.3:60843441-60843460 MS.gene008116:CDS 40.0%
! TTGGTGACATTCTTATAGGC+CGG + chr3.3:60842853-60842872 None:intergenic 40.0%
! TTTATAGTGGGAGAGATTGG+TGG - chr3.3:60843172-60843191 MS.gene008116:CDS 40.0%
!!! AAAGGAGCAGGTTTTAGAGA+AGG + chr3.3:60844025-60844044 None:intergenic 40.0%
AAAGCATGTTGTGGAGGAAG+TGG - chr3.3:60843848-60843867 MS.gene008116:CDS 45.0%
AAGATGGCTTCATACGGTAG+AGG + chr3.3:60842450-60842469 None:intergenic 45.0%
ACCATAAGGACCCATATCTC+TGG + chr3.3:60842523-60842542 None:intergenic 45.0%
CAAGCACCACAACAATTTGG+TGG - chr3.3:60843697-60843716 MS.gene008116:intron 45.0%
CATAAGGACCCATATCTCTG+GGG + chr3.3:60842521-60842540 None:intergenic 45.0%
CCATAAGGACCCATATCTCT+GGG + chr3.3:60842522-60842541 None:intergenic 45.0%
GTTCCAGGGAACTTTCCAAT+GGG - chr3.3:60843475-60843494 MS.gene008116:CDS 45.0%
TCGGTATCACCTTTGCATGT+GGG - chr3.3:60842400-60842419 MS.gene008116:CDS 45.0%
TTCCAGGGAACTTTCCAATG+GGG - chr3.3:60843476-60843495 MS.gene008116:CDS 45.0%
TTCGGTATCACCTTTGCATG+TGG - chr3.3:60842399-60842418 MS.gene008116:CDS 45.0%
AGAAGGAGCGGTAGAGTTAG+TGG - chr3.3:60843453-60843472 MS.gene008116:CDS 50.0%
CCCAGAGATATGGGTCCTTA+TGG - chr3.3:60842519-60842538 MS.gene008116:CDS 50.0%
CGGTAGAGTTAGTGGTTCCA+GGG - chr3.3:60843461-60843480 MS.gene008116:CDS 50.0%
CTCCACCCACCAAATTGTTG+TGG + chr3.3:60843706-60843725 None:intergenic 50.0%
GATGCCAAGTGCAGTTGAAC+CGG + chr3.3:60842917-60842936 None:intergenic 50.0%
GCGAGAGATAGTTCCCTTGA+TGG - chr3.3:60843237-60843256 MS.gene008116:CDS 50.0%
GGTTCCAGGGAACTTTCCAA+TGG - chr3.3:60843474-60843493 MS.gene008116:CDS 50.0%
! CACCACAACAATTTGGTGGG+TGG - chr3.3:60843701-60843720 MS.gene008116:intron 50.0%
!! TATGCCGGTTCAACTGCACT+TGG - chr3.3:60842910-60842929 MS.gene008116:CDS 50.0%
CACCCCATTGGAAAGTTCCC+TGG + chr3.3:60843481-60843500 None:intergenic 55.0%
GCATCGGGACGCATGTCAAA+TGG - chr3.3:60842561-60842580 MS.gene008116:CDS 55.0%
GCGGTAGAGTTAGTGGTTCC+AGG - chr3.3:60843460-60843479 MS.gene008116:CDS 55.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 60842381 60844057 60842381 ID=MS.gene008116
chr3.3 mRNA 60842381 60844057 60842381 ID=MS.gene008116.t1;Parent=MS.gene008116
chr3.3 exon 60843832 60844057 60843832 ID=MS.gene008116.t1.exon1;Parent=MS.gene008116.t1
chr3.3 CDS 60843832 60844057 60843832 ID=cds.MS.gene008116.t1;Parent=MS.gene008116.t1
chr3.3 exon 60843393 60843614 60843393 ID=MS.gene008116.t1.exon2;Parent=MS.gene008116.t1
chr3.3 CDS 60843393 60843614 60843393 ID=cds.MS.gene008116.t1;Parent=MS.gene008116.t1
chr3.3 exon 60843153 60843295 60843153 ID=MS.gene008116.t1.exon3;Parent=MS.gene008116.t1
chr3.3 CDS 60843153 60843295 60843153 ID=cds.MS.gene008116.t1;Parent=MS.gene008116.t1
chr3.3 exon 60842723 60842996 60842723 ID=MS.gene008116.t1.exon4;Parent=MS.gene008116.t1
chr3.3 CDS 60842723 60842996 60842723 ID=cds.MS.gene008116.t1;Parent=MS.gene008116.t1
chr3.3 exon 60842381 60842619 60842381 ID=MS.gene008116.t1.exon5;Parent=MS.gene008116.t1
chr3.3 CDS 60842381 60842619 60842381 ID=cds.MS.gene008116.t1;Parent=MS.gene008116.t1
Gene Sequence

>MS.gene008116

ATGAAGATCTTCATTCTCTTCGGTATCACCTTTGCATGTGGGCTAAATTTCATTTCAAATGCTAATCCTCTACCGTATGAAGCCATCTTCAACTTTGGTGATTCTGTAAGTGATACTGGAAATGCTGCATTTGATTACCCCAGAGATATGGGTCCTTATGGTTCAACGTACTTTAAACATGCATCGGGACGCATGTCAAATGGACGACTAATCATAGACTTCATAGGTACCTTTACACATTCTTTTGTTTCTTAAATAAATTATTTTTGTATTCATGAAATGGTAAATAACAAAATAAAAATAAAAAATAACAACAAAAATTTCCTACCAAGAACTCTAAAATAATCTATTTTATATAGTTGTTATAATTAAAATCAGTAATTTTTAATGTTGATACATTTCTGATTGACAAATTCACTAGCTCATTCTCATGTTAACTGTAGCTGAGGCATATGGTTTGCCATTTTTACCGGCCTATAAGAATGTCACCAAAACCCATGGTGATATAAAAAAGGGAGTTAATTTTGCTTATGCCGGTTCAACTGCACTTGGCATCAAATATTTCAGTGGTAGTGGAGTCCTTACACCAGAGAAAGATAACTCATTAAATGTGCAATTTGATTGGTTTAAGAAGCTAAAACCCTTATTGTGTAACACCAAAGAAGGTTTTGTCCTAACTCCTTGCTTGCTACTAATTTGTGTGATATAAATGATTTATCATCTATAATACTAACAAATTTTTTTTTTCTTGTGAGTTCACAGAATGTGATAGCTTCATCAAAAAATCATTGTTTATAGTGGGAGAGATTGGTGGAAATGATATTTTTTACCATCTTTCCAAAACTATTTCAGAACTGCGAGAGATAGTTCCCTTGATGGTTGATTCCATCAAAAATACCACCACTGTATGTTATACAAAACTTAAGTAATTAAATTTTGAGTATTGGAAAAAAAAAAGTTTACTTCAATTGTAGAATTATTGTGTTTGAGTTATAGGTATTATCAAATAAATAACAATCTTGGAAAAAAGTAATAGATATTTATTTAATTATGTTTATCAGGCTTTAATTGAAGAAGGAGCGGTAGAGTTAGTGGTTCCAGGGAACTTTCCAATGGGGTGTAATACTGACATATTGTCAAAAAAGATTAGTCAGAAGAAAGAAGACTATGATGAATTTGGATGTTTGATAGCTTACAACACTCTCATCGAATACTTTAATGAGCAGCTAAAAAAATCCATAGAGACAATAAAACAGAAATACCCACAAGCTAAGATAGTATATTTTGACTATTACAACGATGCTAAACGTTTATATCAAGCACCACAACAATTTGGTGGGTGGAGCAATTATTTTCTTTCCATGTTAAGTTTTCATTGATTTTTACTTTTCAAATTTATTTGATCCCATGCATTAATTTATGTTCATTAATGATGCAGGTTTTATTTCTGATAAAGTCGAGATTTTGAAAGCATGTTGTGGAGGAAGTGGACCATATCATCATGATCAGTATTTTTGTGGAACGTCGAATACAACAATTTGCTCTGATCCTTCAAAACTAATAAATTGGGATGGTCAACACTTTACCGAAGCCGCTTATAAGCAAATAGCTAAAGGTTTAATTGAAGGCCCTTTTGCATATCCTTCTCTAAAACCTGCTCCTTTCAAGATAGTTTAG
Protein sequence

>MS.gene008116.t1

MKIFILFGITFACGLNFISNANPLPYEAIFNFGDSVSDTGNAAFDYPRDMGPYGSTYFKHASGRMSNGRLIIDFIAEAYGLPFLPAYKNVTKTHGDIKKGVNFAYAGSTALGIKYFSGSGVLTPEKDNSLNVQFDWFKKLKPLLCNTKEECDSFIKKSLFIVGEIGGNDIFYHLSKTISELREIVPLMVDSIKNTTTALIEEGAVELVVPGNFPMGCNTDILSKKISQKKEDYDEFGCLIAYNTLIEYFNEQLKKSIETIKQKYPQAKIVYFDYYNDAKRLYQAPQQFGFISDKVEILKACCGGSGPYHHDQYFCGTSNTTICSDPSKLINWDGQHFTEAAYKQIAKGLIEGPFAYPSLKPAPFKIV