AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene008696

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008696.t1 MTR_3g464530 94.479 326 18 0 1 326 1 326 0.0 625
MS.gene008696.t1 MTR_3g464530 93.254 252 17 0 1 252 1 252 1.94e-170 473
MS.gene008696.t1 MTR_2g083030 35.244 349 176 13 4 321 1 330 2.40e-57 188
MS.gene008696.t1 MTR_4g074130 33.526 346 189 9 4 321 2 334 6.67e-55 182
MS.gene008696.t1 MTR_5g005570 34.012 344 189 9 1 321 1 329 2.07e-54 181
MS.gene008696.t1 MTR_7g451860 36.190 315 168 10 27 321 35 336 7.02e-54 180
MS.gene008696.t1 MTR_7g047670 36.190 315 168 10 27 321 35 336 7.02e-54 180
MS.gene008696.t1 MTR_2g083000 33.626 342 186 11 4 321 1 325 1.77e-53 178
MS.gene008696.t1 MTR_4g015790 34.323 303 160 12 34 306 62 355 1.31e-44 156
MS.gene008696.t1 MTR_3g070860 34.641 306 146 11 34 302 50 338 8.00e-44 154
MS.gene008696.t1 MTR_7g068650 32.680 306 153 8 34 302 54 343 5.34e-43 152
MS.gene008696.t1 MTR_5g082750 33.981 309 162 9 25 302 40 337 1.59e-42 150
MS.gene008696.t1 MTR_8g024120 33.904 292 165 7 31 301 39 323 3.36e-41 147
MS.gene008696.t1 MTR_4g087120 31.847 314 155 10 34 301 26 326 1.62e-40 145
MS.gene008696.t1 MTR_8g009160 33.462 260 150 7 34 279 60 310 1.29e-39 143
MS.gene008696.t1 MTR_4g087110 31.090 312 160 11 34 301 26 326 1.90e-39 142
MS.gene008696.t1 MTR_8g009110 30.702 342 192 13 9 322 40 364 5.73e-39 141
MS.gene008696.t1 MTR_4g087100 30.556 324 168 13 30 308 22 333 1.67e-38 140
MS.gene008696.t1 MTR_4g087140 30.745 322 169 13 24 301 16 327 5.73e-38 138
MS.gene008696.t1 MTR_3g083370 32.103 271 157 7 32 288 2 259 1.30e-37 136
MS.gene008696.t1 MTR_8g008930 32.453 265 147 9 34 279 60 311 1.69e-37 137
MS.gene008696.t1 MTR_8g028435 33.077 260 151 7 34 279 60 310 3.30e-37 137
MS.gene008696.t1 MTR_1g034120 29.897 291 160 10 45 303 52 330 5.68e-37 135
MS.gene008696.t1 MTR_2g025120 31.250 272 154 8 34 288 4 259 6.61e-37 135
MS.gene008696.t1 MTR_8g009090 30.743 296 170 9 34 303 60 346 7.19e-37 135
MS.gene008696.t1 MTR_4g117880 31.636 275 165 7 34 295 60 324 1.01e-36 135
MS.gene008696.t1 MTR_8g009170 31.818 286 166 10 9 279 40 311 1.48e-36 135
MS.gene008696.t1 MTR_7g062570 29.630 270 172 4 31 289 52 314 3.04e-36 134
MS.gene008696.t1 MTR_7g063730 29.373 303 180 7 21 301 55 345 3.31e-36 134
MS.gene008696.t1 MTR_2g069190 33.460 263 145 9 34 279 68 317 6.96e-36 133
MS.gene008696.t1 MTR_5g085330 30.847 295 164 9 34 301 5 286 8.75e-36 132
MS.gene008696.t1 MTR_1g034060 29.553 291 161 10 45 303 52 330 8.84e-36 132
MS.gene008696.t1 MTR_5g055690 32.819 259 153 6 34 279 47 297 1.05e-35 132
MS.gene008696.t1 MTR_1g033810 31.164 292 161 8 7 282 34 301 3.08e-35 131
MS.gene008696.t1 MTR_2g069090 30.537 298 172 9 34 305 68 356 4.66e-35 131
MS.gene008696.t1 MTR_2g069300 29.348 276 169 7 34 295 54 317 5.11e-35 130
MS.gene008696.t1 MTR_3g092890 28.136 295 188 5 28 304 32 320 7.70e-35 130
MS.gene008696.t1 MTR_1g034140 31.699 306 165 11 32 303 25 320 1.57e-34 129
MS.gene008696.t1 MTR_4g087090 29.874 318 171 11 31 308 27 332 2.50e-34 129
MS.gene008696.t1 MTR_5g048550 30.345 290 174 8 18 288 25 305 3.76e-34 128
MS.gene008696.t1 MTR_3g072810 32.099 324 184 11 2 302 12 322 7.92e-34 127
MS.gene008696.t1 MTR_5g048570 30.597 268 164 6 34 288 45 303 1.04e-33 127
MS.gene008696.t1 MTR_0328s0030 31.298 262 158 6 34 282 45 297 1.67e-33 126
MS.gene008696.t1 MTR_7g062580 28.261 276 168 6 31 289 52 314 2.17e-33 126
MS.gene008696.t1 MTR_0009s0050 30.224 268 165 6 34 288 47 305 2.59e-33 126
MS.gene008696.t1 MTR_8g064200 29.344 259 162 6 34 279 52 302 2.91e-33 126
MS.gene008696.t1 MTR_8g064200 29.344 259 162 6 34 279 57 307 3.57e-33 125
MS.gene008696.t1 MTR_0009s0050 30.224 268 165 6 34 288 47 305 3.64e-33 125
MS.gene008696.t1 MTR_5g055820 31.034 261 155 8 34 279 47 297 5.27e-33 125
MS.gene008696.t1 MTR_2g102570 31.034 290 170 10 34 301 52 333 1.02e-32 125
MS.gene008696.t1 MTR_5g048850 29.885 261 157 6 34 279 47 296 1.03e-32 124
MS.gene008696.t1 MTR_0009s0480 29.389 262 163 6 34 282 46 298 1.45e-32 124
MS.gene008696.t1 MTR_5g048470 29.502 261 159 8 34 279 53 303 1.78e-32 124
MS.gene008696.t1 MTR_5g055800 31.698 265 153 7 34 282 47 299 3.55e-32 123
MS.gene008696.t1 MTR_5g055680 28.383 303 186 8 9 288 11 305 1.21e-31 121
MS.gene008696.t1 MTR_5g055900 29.588 267 168 6 34 288 47 305 1.27e-31 121
MS.gene008696.t1 MTR_2g069210 28.571 273 170 7 47 303 86 349 1.64e-31 121
MS.gene008696.t1 MTR_5g048740 30.798 263 159 8 31 279 42 295 3.74e-31 120
MS.gene008696.t1 MTR_2g070870 27.832 309 185 12 19 302 11 306 5.95e-31 119
MS.gene008696.t1 MTR_8g009080 30.165 242 149 7 45 279 114 342 7.50e-31 120
MS.gene008696.t1 MTR_1g043760 30.175 285 161 10 18 279 32 301 7.91e-31 119
MS.gene008696.t1 MTR_3g088565 29.545 264 159 7 34 282 3 254 1.43e-30 117
MS.gene008696.t1 MTR_3g091350 30.634 284 161 9 25 285 46 316 1.73e-30 119
MS.gene008696.t1 MTR_1g093110 28.286 350 186 14 18 322 44 373 1.84e-30 119
MS.gene008696.t1 MTR_3g091360 30.796 289 166 10 19 285 33 309 1.86e-30 118
MS.gene008696.t1 MTR_8g062600 29.889 271 157 9 34 286 67 322 4.31e-30 117
MS.gene008696.t1 MTR_4g024660 30.496 282 160 10 34 295 67 332 4.78e-30 117
MS.gene008696.t1 MTR_5g025050 29.139 302 184 10 31 315 2 290 1.16e-29 115
MS.gene008696.t1 MTR_7g062550 27.037 270 179 4 31 289 57 319 1.16e-29 116
MS.gene008696.t1 MTR_2g072910 30.515 272 157 7 25 279 46 302 1.29e-29 116
MS.gene008696.t1 MTR_4g087130 28.344 314 173 9 30 301 22 325 1.50e-29 116
MS.gene008696.t1 MTR_8g009170 30.224 268 159 9 9 262 40 293 1.59e-29 114
MS.gene008696.t1 MTR_2g072890 27.815 302 190 8 2 288 24 312 2.88e-29 115
MS.gene008696.t1 MTR_6g015950 27.055 292 190 6 31 304 36 322 2.98e-29 115
MS.gene008696.t1 MTR_5g055690 31.780 236 140 6 34 256 47 274 3.19e-29 113
MS.gene008696.t1 MTR_7g062600 25.830 271 182 5 31 289 48 311 7.30e-29 114
MS.gene008696.t1 MTR_2g437380 25.743 303 183 10 29 301 46 336 8.04e-29 114
MS.gene008696.t1 MTR_8g461330 28.852 305 170 13 31 302 24 314 1.11e-28 113
MS.gene008696.t1 MTR_5g025090 27.778 288 179 8 32 302 3 278 1.51e-28 112
MS.gene008696.t1 MTR_4g093840 29.758 289 165 10 25 289 49 323 1.73e-28 113
MS.gene008696.t1 MTR_8g063070 28.409 264 156 8 34 279 67 315 2.04e-28 113
MS.gene008696.t1 MTR_5g059140 30.769 273 148 9 34 282 42 297 2.30e-28 112
MS.gene008696.t1 MTR_8g041620 30.252 238 145 7 50 279 95 319 3.36e-28 112
MS.gene008696.t1 MTR_3g072820 28.374 289 176 9 10 282 22 295 5.28e-28 111
MS.gene008696.t1 MTR_1g081840 26.948 308 190 9 8 289 24 322 5.85e-28 112
MS.gene008696.t1 MTR_7g062560 27.389 314 190 8 11 305 43 337 6.91e-28 111
MS.gene008696.t1 MTR_5g059130 30.741 270 150 9 34 282 44 297 7.34e-28 111
MS.gene008696.t1 MTR_3g088745 28.620 297 177 13 18 288 17 304 1.62e-27 110
MS.gene008696.t1 MTR_1g093140 28.148 270 166 9 34 287 73 330 4.56e-27 109
MS.gene008696.t1 MTR_1g070120 26.332 319 197 11 7 304 21 322 4.89e-27 108
MS.gene008696.t1 MTR_2g068950 26.523 279 138 8 34 277 63 309 5.23e-27 109
MS.gene008696.t1 MTR_5g027230 26.298 289 184 7 31 302 3 279 5.66e-27 108
MS.gene008696.t1 MTR_2g069060 28.125 256 163 6 34 277 49 295 6.40e-27 108
MS.gene008696.t1 MTR_5g048850 29.362 235 140 6 34 253 47 270 2.12e-26 105
MS.gene008696.t1 MTR_1g093120 27.203 261 163 8 34 279 67 315 3.11e-26 107
MS.gene008696.t1 MTR_2g068960 26.690 281 139 8 34 279 63 311 3.62e-26 107
MS.gene008696.t1 MTR_1g011580 29.740 269 170 8 29 288 58 316 4.60e-26 106
MS.gene008696.t1 MTR_8g041600 28.745 247 147 7 45 279 90 319 4.66e-26 107
MS.gene008696.t1 MTR_2g019370 27.869 305 172 12 34 305 28 317 4.95e-26 106
MS.gene008696.t1 MTR_3g117420 28.090 267 163 7 34 282 52 307 6.09e-26 106
MS.gene008696.t1 MTR_7g045650 27.237 257 157 6 25 264 51 294 6.28e-26 105
MS.gene008696.t1 MTR_3g063180 27.215 316 192 12 18 301 23 332 1.34e-25 105
MS.gene008696.t1 MTR_7g077670 28.616 318 177 13 34 319 11 310 1.38e-25 104
MS.gene008696.t1 MTR_1g070135 24.149 323 199 11 7 304 21 322 2.41e-25 104
MS.gene008696.t1 MTR_1g043775 30.741 270 151 11 30 279 50 303 2.54e-25 104
MS.gene008696.t1 MTR_0009s0480 28.448 232 144 6 34 252 46 268 3.04e-25 102
MS.gene008696.t1 MTR_3g083370 30.213 235 137 8 32 252 2 223 3.23e-25 101
MS.gene008696.t1 MTR_6g464620 27.206 272 178 6 34 288 64 332 3.27e-25 104
MS.gene008696.t1 MTR_1g102070 26.603 312 183 9 31 312 70 365 3.68e-25 104
MS.gene008696.t1 MTR_4g116010 29.697 330 187 14 11 314 20 330 4.19e-25 103
MS.gene008696.t1 MTR_8g030880 26.791 321 180 12 34 319 10 310 4.65e-25 103
MS.gene008696.t1 MTR_2g025120 29.630 216 126 7 47 252 24 223 5.04e-25 100
MS.gene008696.t1 MTR_1g043770 28.671 286 163 12 18 279 32 300 5.52e-25 103
MS.gene008696.t1 MTR_7g029655 27.365 296 160 11 18 279 40 314 6.11e-25 103
MS.gene008696.t1 MTR_8g093930 23.353 334 208 9 11 307 20 342 7.01e-25 103
MS.gene008696.t1 MTR_8g009080 29.694 229 140 8 45 265 114 329 7.54e-25 102
MS.gene008696.t1 MTR_5g032880 28.179 291 181 8 31 301 35 317 1.32e-24 104
MS.gene008696.t1 MTR_5g032880 27.885 312 169 8 32 305 374 667 1.63e-22 98.6
MS.gene008696.t1 MTR_0032s0040 29.278 263 160 8 34 281 70 321 1.46e-24 102
MS.gene008696.t1 MTR_8g009120 30.063 316 171 15 34 322 60 352 1.66e-24 102
MS.gene008696.t1 MTR_5g024940 26.481 287 167 7 31 302 3 260 3.31e-24 100
MS.gene008696.t1 MTR_7g056347 25.547 274 177 6 34 292 67 328 3.67e-24 101
MS.gene008696.t1 MTR_7g078010 29.897 291 150 11 34 295 67 332 4.14e-24 101
MS.gene008696.t1 MTR_3g045230 27.899 276 178 8 23 288 47 311 4.27e-24 101
MS.gene008696.t1 MTR_8g033380 26.190 294 183 9 34 301 54 339 4.34e-24 101
MS.gene008696.t1 MTR_1g043810 28.819 288 163 12 18 279 32 303 6.81e-24 100
MS.gene008696.t1 MTR_1g070080 25.000 292 191 8 34 304 38 322 7.53e-24 100
MS.gene008696.t1 MTR_8g074070 26.761 284 182 6 34 298 52 328 7.61e-24 100
MS.gene008696.t1 MTR_6g092620 28.309 272 164 8 34 288 3 260 8.29e-24 99.4
MS.gene008696.t1 MTR_7g102720 25.993 277 177 7 27 288 29 292 9.99e-24 99.8
MS.gene008696.t1 MTR_8g469400 25.249 301 193 9 34 325 67 344 1.06e-23 100
MS.gene008696.t1 MTR_3g040410 27.551 294 177 9 34 302 6 288 1.63e-23 99.0
MS.gene008696.t1 MTR_2g069020 27.344 256 165 5 34 277 67 313 1.73e-23 99.8
MS.gene008696.t1 MTR_5g065010 27.596 337 193 15 2 307 11 327 1.87e-23 99.4
MS.gene008696.t1 MTR_4g119410 28.986 276 172 8 34 295 67 332 2.08e-23 99.4
MS.gene008696.t1 MTR_2g069020 27.344 256 165 5 34 277 67 313 2.36e-23 99.8
MS.gene008696.t1 MTR_8g006930 28.223 287 160 9 34 295 67 332 2.44e-23 99.4
MS.gene008696.t1 MTR_8g009150 26.718 262 153 7 34 283 60 294 2.55e-23 99.0
MS.gene008696.t1 MTR_1g062110 29.520 271 147 9 34 277 66 319 2.66e-23 99.4
MS.gene008696.t1 MTR_2g033270 25.658 304 168 13 34 302 19 299 3.72e-23 98.2
MS.gene008696.t1 MTR_1g070185 27.368 285 170 9 34 300 69 334 4.55e-23 98.6
MS.gene008696.t1 MTR_3g096500 25.000 336 218 10 10 312 38 372 4.64e-23 98.6
MS.gene008696.t1 MTR_4g123020 24.351 308 187 10 25 302 11 302 7.92e-23 97.1
MS.gene008696.t1 MTR_5g025060 25.333 300 171 9 32 315 4 266 7.99e-23 96.3
MS.gene008696.t1 MTR_7g016090 25.606 289 191 6 17 292 22 299 8.39e-23 97.4
MS.gene008696.t1 MTR_7g016090 25.606 289 191 6 17 292 24 301 9.61e-23 97.1
MS.gene008696.t1 MTR_5g022020 25.733 307 190 12 31 309 36 332 1.14e-22 97.4
MS.gene008696.t1 MTR_8g074050 27.113 284 181 6 34 298 52 328 2.27e-22 96.3
MS.gene008696.t1 MTR_3g043900 26.333 300 187 10 23 301 47 333 2.55e-22 96.3
MS.gene008696.t1 MTR_4g132770 42.718 103 56 1 190 289 28 130 3.45e-22 91.7
MS.gene008696.t1 MTR_2g072910 29.388 245 141 7 25 252 46 275 4.13e-22 94.4
MS.gene008696.t1 MTR_8g009080 28.910 211 130 7 45 248 114 311 4.85e-22 95.1
MS.gene008696.t1 MTR_2g069010 25.385 260 169 7 34 279 69 317 6.01e-22 95.5
MS.gene008696.t1 MTR_5g032870 27.372 274 175 6 32 288 36 302 8.58e-22 94.7
MS.gene008696.t1 MTR_3g058610 25.243 309 193 11 31 311 36 334 1.08e-21 94.4
MS.gene008696.t1 MTR_2g069060 27.273 231 147 6 34 252 27 248 1.13e-21 92.8
MS.gene008696.t1 MTR_1g032140 28.137 263 164 9 34 283 66 316 1.92e-21 94.0
MS.gene008696.t1 MTR_1g070085 24.000 300 191 8 34 307 37 325 1.99e-21 93.6
MS.gene008696.t1 MTR_1g070085 24.000 300 191 8 34 307 37 325 1.99e-21 93.6
MS.gene008696.t1 MTR_7g102820 27.305 282 172 10 15 277 59 326 2.31e-21 94.0
MS.gene008696.t1 MTR_0056s0160 32.061 131 86 1 152 279 51 181 5.01e-21 90.5
MS.gene008696.t1 MTR_8g075890 24.924 329 204 13 10 310 20 333 5.10e-21 92.8
MS.gene008696.t1 MTR_8g074070 26.241 282 167 6 34 298 52 309 5.56e-21 92.0
MS.gene008696.t1 MTR_4g096840 27.152 302 171 13 34 302 29 314 5.58e-21 92.0
MS.gene008696.t1 MTR_1g048940 25.333 300 185 10 18 292 25 310 8.78e-21 92.0
MS.gene008696.t1 MTR_7g056353 28.452 239 155 6 62 295 79 306 1.27e-20 92.8
MS.gene008696.t1 MTR_3g026150 25.667 300 182 9 31 301 54 341 1.38e-20 91.3
MS.gene008696.t1 MTR_7g105070 28.244 262 161 9 34 280 59 308 1.83e-20 91.3
MS.gene008696.t1 MTR_0009s0050 32.168 143 94 1 149 288 65 207 4.49e-20 88.2
MS.gene008696.t1 MTR_0009s0050 32.168 143 94 1 149 288 65 207 4.99e-20 88.2
MS.gene008696.t1 MTR_4g100600 30.142 282 158 12 34 289 9 277 5.63e-20 89.4
MS.gene008696.t1 MTR_7g016080 23.510 302 187 9 14 292 13 293 7.17e-20 89.0
MS.gene008696.t1 MTR_1g086550 25.733 307 178 14 34 302 20 314 1.05e-19 88.6
MS.gene008696.t1 MTR_5g011250 27.899 276 173 10 26 288 51 313 1.52e-19 88.6
MS.gene008696.t1 MTR_8g075830 25.161 310 190 13 31 310 36 333 1.57e-19 88.6
MS.gene008696.t1 MTR_1g032220 25.526 333 199 13 18 314 49 368 2.51e-19 87.8
MS.gene008696.t1 MTR_3g117485 25.301 249 174 4 43 285 68 310 2.91e-19 87.4
MS.gene008696.t1 MTR_1g043775 29.339 242 136 10 30 252 50 275 3.89e-19 86.7
MS.gene008696.t1 MTR_2g437380 24.506 253 160 8 69 301 1 242 4.36e-19 85.9
MS.gene008696.t1 MTR_7g081710 25.083 303 188 9 26 301 41 331 1.25e-18 85.9
MS.gene008696.t1 MTR_8g009180 32.222 180 101 6 119 279 63 240 1.93e-18 84.3
MS.gene008696.t1 MTR_8g041600 26.484 219 133 6 45 252 90 291 1.94e-18 84.7
MS.gene008696.t1 MTR_0009s0050 33.600 125 80 1 167 288 1 125 4.71e-18 80.9
MS.gene008696.t1 MTR_1g043770 27.799 259 146 12 18 252 32 273 5.20e-18 83.2
MS.gene008696.t1 MTR_3g108520 26.518 313 163 11 34 301 7 297 6.18e-18 83.2
MS.gene008696.t1 MTR_1g043810 27.308 260 148 11 18 252 32 275 1.08e-17 82.8
MS.gene008696.t1 MTR_3g117485 24.370 238 168 4 54 285 7 238 1.45e-17 81.6
MS.gene008696.t1 MTR_7g056393 26.619 278 176 8 34 295 67 332 2.14e-17 82.4
MS.gene008696.t1 MTR_8g093980 22.156 334 213 9 10 307 31 353 3.09e-17 82.0
MS.gene008696.t1 MTR_2g068840 25.092 271 173 7 30 282 54 312 3.83e-17 81.6
MS.gene008696.t1 MTR_1g062110 27.642 246 134 9 34 252 66 294 4.49e-17 80.9
MS.gene008696.t1 MTR_2g068800 27.059 255 145 9 30 270 54 281 6.87e-17 79.7
MS.gene008696.t1 MTR_1g032250 24.904 261 175 8 34 283 73 323 8.12e-17 80.9
MS.gene008696.t1 MTR_7g078010 28.340 247 124 10 34 252 67 288 9.63e-17 79.7
MS.gene008696.t1 MTR_1g070135 23.293 249 166 8 16 252 25 260 1.16e-16 79.3
MS.gene008696.t1 MTR_1g043840 37.857 140 73 5 148 279 51 184 3.42e-16 78.6
MS.gene008696.t1 MTR_1g070085 23.881 201 138 4 121 307 48 247 8.43e-16 76.6
MS.gene008696.t1 MTR_1g070110 36.134 119 62 3 206 314 110 224 2.24e-15 74.7
MS.gene008696.t1 MTR_8g102600 29.891 184 102 6 141 304 86 262 4.04e-15 74.7
MS.gene008696.t1 MTR_0009s0400 36.957 92 55 1 194 282 4 95 5.52e-15 71.6
MS.gene008696.t1 MTR_1g070100 23.182 220 138 5 121 326 44 246 6.28e-15 73.9
MS.gene008696.t1 MTR_4g115990 23.986 296 182 8 33 311 45 314 1.31e-14 73.9
MS.gene008696.t1 MTR_4g100590 26.978 278 167 12 34 289 9 272 1.94e-14 73.2
MS.gene008696.t1 MTR_4g011720 25.733 307 176 10 29 301 4 292 4.07e-14 72.4
MS.gene008696.t1 MTR_3g026150 26.471 170 112 3 145 301 69 238 3.17e-13 68.9
MS.gene008696.t1 MTR_4g011690 24.000 300 193 11 28 301 3 293 7.21e-13 68.6
MS.gene008696.t1 MTR_6g035160 35.294 119 67 4 192 301 37 154 1.55e-12 65.5
MS.gene008696.t1 MTR_1g027290 24.823 282 168 12 47 300 52 317 2.14e-12 67.4
MS.gene008696.t1 MTR_3g026150 24.896 241 150 7 31 252 54 282 4.57e-12 65.9
MS.gene008696.t1 MTR_3g040440 37.662 77 45 2 191 265 3 78 9.17e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008696.t1 AT5G58660 50.571 350 144 10 1 324 1 347 8.24e-109 321
MS.gene008696.t1 AT3G47190 45.045 333 171 8 1 324 1 330 1.15e-91 276
MS.gene008696.t1 AT5G58660 48.188 276 115 9 1 251 1 273 7.53e-75 232
MS.gene008696.t1 AT4G21200 35.238 315 167 10 27 321 36 333 5.23e-55 182
MS.gene008696.t1 AT1G50960 32.248 307 177 7 34 321 40 334 3.66e-47 162
MS.gene008696.t1 AT3G11180 33.673 294 161 11 34 302 95 379 4.52e-41 148
MS.gene008696.t1 AT3G11180 32.899 307 171 12 34 314 95 392 6.22e-41 147
MS.gene008696.t1 AT5G05600 32.323 297 165 10 34 302 62 350 2.75e-40 145
MS.gene008696.t1 AT4G10500 33.935 277 161 8 25 288 35 302 3.64e-40 144
MS.gene008696.t1 AT4G10490 31.561 301 174 7 25 301 33 325 4.39e-38 139
MS.gene008696.t1 AT1G78550 31.408 277 166 6 31 292 50 317 1.20e-37 137
MS.gene008696.t1 AT1G12010 29.310 290 170 8 34 301 7 283 7.24e-37 135
MS.gene008696.t1 AT2G38240 29.126 309 183 9 34 316 48 346 2.01e-36 134
MS.gene008696.t1 AT3G55970 31.579 342 177 13 9 315 32 351 9.40e-36 133
MS.gene008696.t1 AT1G05010 30.882 272 160 9 32 288 2 260 1.85e-34 128
MS.gene008696.t1 AT1G62380 26.990 289 178 6 34 301 7 283 4.62e-34 127
MS.gene008696.t1 AT1G77330 31.502 273 156 10 34 288 3 262 7.21e-34 126
MS.gene008696.t1 AT3G19010 27.954 347 180 13 1 301 1 323 4.69e-33 125
MS.gene008696.t1 AT3G19010 27.954 347 180 13 1 301 1 323 4.69e-33 125
MS.gene008696.t1 AT1G80330 31.579 304 173 11 23 301 40 333 8.51e-33 125
MS.gene008696.t1 AT5G24530 27.682 289 182 6 34 301 38 320 1.09e-32 124
MS.gene008696.t1 AT4G25420 27.168 346 201 10 8 312 31 366 1.38e-32 124
MS.gene008696.t1 AT1G17020 31.818 264 152 8 34 279 53 306 1.77e-32 124
MS.gene008696.t1 AT1G17010 31.970 269 156 8 34 285 54 312 1.95e-32 124
MS.gene008696.t1 AT5G43440 28.231 294 168 8 24 295 52 324 1.27e-31 122
MS.gene008696.t1 AT5G08640 28.767 292 175 9 34 301 43 325 1.53e-31 121
MS.gene008696.t1 AT5G08640 28.767 292 175 9 34 301 43 325 1.53e-31 121
MS.gene008696.t1 AT1G15550 29.693 293 169 10 34 301 57 337 1.88e-31 121
MS.gene008696.t1 AT5G43450 28.616 318 186 10 18 303 36 344 1.91e-31 121
MS.gene008696.t1 AT3G19000 29.904 311 167 10 31 301 29 328 2.41e-30 118
MS.gene008696.t1 AT1G04350 28.571 280 174 7 18 279 34 305 4.23e-30 117
MS.gene008696.t1 AT4G25310 31.727 249 142 8 43 279 69 301 9.08e-30 116
MS.gene008696.t1 AT5G59540 27.517 298 174 9 34 301 61 346 1.22e-29 116
MS.gene008696.t1 AT5G59530 28.182 330 170 12 18 301 36 344 1.30e-29 116
MS.gene008696.t1 AT4G25300 30.534 262 157 7 34 279 52 304 1.71e-29 115
MS.gene008696.t1 AT5G20400 30.345 290 170 9 17 289 34 308 6.30e-29 114
MS.gene008696.t1 AT1G06620 29.123 285 177 9 8 279 39 311 8.26e-29 114
MS.gene008696.t1 AT1G78550 29.630 243 155 5 57 292 6 239 8.77e-29 112
MS.gene008696.t1 AT5G51810 27.742 310 185 10 34 312 63 364 2.08e-28 113
MS.gene008696.t1 AT1G55290 31.408 277 163 10 27 288 54 318 2.68e-28 112
MS.gene008696.t1 AT1G49390 30.584 291 168 9 13 285 30 304 5.13e-28 112
MS.gene008696.t1 AT5G54000 30.464 302 174 9 7 289 25 309 5.37e-28 112
MS.gene008696.t1 AT5G20550 31.387 274 161 8 34 289 45 309 9.78e-28 111
MS.gene008696.t1 AT1G04380 28.616 318 177 12 18 301 24 325 1.01e-27 110
MS.gene008696.t1 AT4G16330 27.491 291 176 10 30 300 63 338 1.57e-27 110
MS.gene008696.t1 AT4G23340 28.912 294 171 12 50 319 30 309 2.49e-27 109
MS.gene008696.t1 AT2G34555 30.345 290 171 11 10 282 3 278 3.37e-27 109
MS.gene008696.t1 AT3G19010 27.164 335 168 14 1 301 1 293 3.43e-27 108
MS.gene008696.t1 AT5G05600 31.780 236 135 9 34 251 62 289 3.57e-27 108
MS.gene008696.t1 AT2G19590 29.242 277 166 9 27 288 4 265 5.03e-27 108
MS.gene008696.t1 AT3G21420 26.838 272 176 5 34 289 55 319 1.30e-26 108
MS.gene008696.t1 AT5G63600 27.820 266 169 7 34 288 33 286 1.45e-26 107
MS.gene008696.t1 AT1G06650 27.742 310 184 10 34 318 64 358 2.55e-26 107
MS.gene008696.t1 AT1G80340 29.588 267 169 8 34 289 50 308 2.62e-26 107
MS.gene008696.t1 AT3G13610 29.021 286 178 9 17 288 44 318 4.96e-26 106
MS.gene008696.t1 AT2G36690 29.078 282 160 9 34 292 61 325 1.01e-25 105
MS.gene008696.t1 AT2G36690 29.078 282 160 9 34 292 61 325 1.01e-25 105
MS.gene008696.t1 AT1G78440 28.904 301 167 12 34 302 18 303 1.06e-25 105
MS.gene008696.t1 AT1G06640 27.653 311 185 10 34 319 64 359 1.54e-25 105
MS.gene008696.t1 AT3G19000 29.231 260 143 8 31 260 29 277 2.52e-25 103
MS.gene008696.t1 AT5G63600 28.090 267 168 8 34 288 33 287 2.65e-25 103
MS.gene008696.t1 AT1G44090 26.437 348 207 10 1 310 27 363 3.52e-25 104
MS.gene008696.t1 AT4G22880 28.723 282 169 9 29 288 42 313 6.04e-25 103
MS.gene008696.t1 AT4G22880 28.723 282 169 9 29 288 42 313 6.04e-25 103
MS.gene008696.t1 AT4G22880 28.723 282 169 9 29 288 42 313 6.04e-25 103
MS.gene008696.t1 AT5G63595 28.777 278 161 7 21 288 12 262 6.98e-25 102
MS.gene008696.t1 AT1G03410 27.517 298 174 10 34 301 57 342 2.27e-24 102
MS.gene008696.t1 AT1G03410 27.517 298 174 10 34 301 94 379 4.78e-24 101
MS.gene008696.t1 AT5G54000 31.250 240 144 7 60 289 1 229 5.02e-24 99.4
MS.gene008696.t1 AT3G55970 30.249 281 148 12 2 252 20 282 5.02e-24 100
MS.gene008696.t1 AT3G19010 27.491 291 151 12 1 255 1 267 6.49e-24 99.8
MS.gene008696.t1 AT1G14130 27.740 292 172 9 34 302 9 284 7.17e-24 99.8
MS.gene008696.t1 AT1G30040 26.000 300 182 11 31 303 28 314 8.02e-24 100
MS.gene008696.t1 AT1G03400 28.223 287 177 8 34 301 56 332 1.42e-23 99.8
MS.gene008696.t1 AT1G06645 29.389 262 155 10 34 279 77 324 1.57e-23 100
MS.gene008696.t1 AT5G63590 27.397 292 182 10 34 302 14 298 2.66e-23 98.2
MS.gene008696.t1 AT5G43440 27.059 255 145 7 24 256 52 287 3.56e-23 97.4
MS.gene008696.t1 AT1G49390 30.213 235 145 6 60 285 1 225 5.14e-23 96.7
MS.gene008696.t1 AT2G30830 28.689 244 158 6 50 286 80 314 1.10e-22 97.4
MS.gene008696.t1 AT5G43450 26.538 260 163 6 18 258 36 286 1.58e-22 95.9
MS.gene008696.t1 AT4G21690 27.397 292 183 8 31 301 44 327 1.70e-22 96.7
MS.gene008696.t1 AT2G44800 27.063 303 166 11 34 301 52 334 4.59e-22 95.5
MS.gene008696.t1 AT1G06620 28.016 257 161 8 8 252 39 283 4.60e-22 94.4
MS.gene008696.t1 AT5G59540 26.695 236 144 7 34 252 61 284 4.77e-22 94.4
MS.gene008696.t1 AT5G07200 24.784 347 209 13 10 312 29 367 5.07e-22 95.9
MS.gene008696.t1 AT4G25310 28.571 245 127 7 43 279 69 273 5.73e-22 94.7
MS.gene008696.t1 AT5G43935 27.376 263 161 9 34 288 19 259 8.80e-22 93.6
MS.gene008696.t1 AT3G61400 27.778 306 173 14 34 303 60 353 1.48e-20 91.7
MS.gene008696.t1 AT1G06640 28.099 242 152 7 34 262 64 296 1.84e-20 90.5
MS.gene008696.t1 AT2G19590 28.571 245 152 8 52 288 21 250 1.89e-20 90.1
MS.gene008696.t1 AT3G51240 24.688 320 198 11 31 323 35 338 2.98e-20 90.5
MS.gene008696.t1 AT1G06650 28.139 231 144 6 34 251 64 285 3.12e-20 89.7
MS.gene008696.t1 AT1G04380 27.907 258 149 9 18 254 24 265 3.53e-20 89.0
MS.gene008696.t1 AT3G60290 25.667 300 169 11 34 301 52 329 3.76e-20 90.1
MS.gene008696.t1 AT1G60980 24.333 300 187 7 34 301 57 348 6.20e-20 89.7
MS.gene008696.t1 AT4G25420 24.638 276 171 8 8 256 31 296 1.26e-19 87.8
MS.gene008696.t1 AT3G12900 25.475 263 178 7 29 282 54 307 2.93e-19 87.8
MS.gene008696.t1 AT5G51310 25.197 254 159 8 46 279 21 263 4.35e-19 86.7
MS.gene008696.t1 AT2G30840 26.446 242 158 8 49 282 83 312 6.85e-19 86.7
MS.gene008696.t1 AT5G51810 27.426 237 147 8 34 253 63 291 7.57e-19 85.5
MS.gene008696.t1 AT2G25450 28.216 241 155 8 47 280 77 306 1.26e-18 85.9
MS.gene008696.t1 AT1G06640 27.948 229 143 6 34 249 64 283 1.46e-18 84.7
MS.gene008696.t1 AT1G03400 25.714 315 177 9 34 301 56 360 4.43e-18 84.3
MS.gene008696.t1 AT4G23340 29.897 194 110 8 149 319 1 191 2.00e-17 79.7
MS.gene008696.t1 AT3G50210 23.420 269 172 10 45 289 36 294 2.35e-17 82.0
MS.gene008696.t1 AT3G50210 23.420 269 172 10 45 289 36 294 2.35e-17 82.0
MS.gene008696.t1 AT3G50210 23.420 269 172 10 45 289 36 294 2.35e-17 82.0
MS.gene008696.t1 AT1G47990 23.438 320 180 12 27 305 8 303 1.15e-16 79.7
MS.gene008696.t1 AT1G14120 27.007 274 163 9 34 290 8 261 1.16e-16 79.7
MS.gene008696.t1 AT1G14120 27.007 274 163 9 34 290 8 261 1.16e-16 79.7
MS.gene008696.t1 AT1G14120 27.007 274 163 9 34 290 8 261 1.16e-16 79.7
MS.gene008696.t1 AT4G16330 29.560 159 107 3 146 300 75 232 3.18e-16 77.4
MS.gene008696.t1 AT4G25300 32.576 132 85 2 152 279 79 210 1.47e-15 75.9
MS.gene008696.t1 AT2G30840 26.033 242 153 9 49 282 83 306 1.71e-15 76.6
MS.gene008696.t1 AT1G52800 25.641 273 156 10 49 296 37 287 3.55e-15 75.5
MS.gene008696.t1 AT5G12270 26.736 288 183 11 18 289 41 316 4.34e-15 75.5
MS.gene008696.t1 AT5G63580 27.586 232 145 7 34 252 19 240 5.22e-15 73.9
MS.gene008696.t1 AT1G30040 24.790 238 149 9 31 251 28 252 8.22e-15 73.6
MS.gene008696.t1 AT5G63580 27.391 230 144 7 34 250 19 238 1.37e-14 72.8
MS.gene008696.t1 AT1G52820 22.909 275 187 7 42 301 31 295 1.37e-14 73.6
MS.gene008696.t1 AT3G46500 24.068 295 183 11 25 289 3 286 1.81e-14 73.6
MS.gene008696.t1 AT5G07480 23.397 312 181 12 30 301 40 333 2.43e-14 73.6
MS.gene008696.t1 AT1G35190 26.038 265 171 9 46 289 28 288 7.12e-14 71.6
MS.gene008696.t1 AT3G51240 26.738 187 116 6 151 323 75 254 1.08e-13 70.5
MS.gene008696.t1 AT2G30840 24.762 210 140 6 49 252 83 280 2.64e-13 69.7
MS.gene008696.t1 AT3G46490 23.569 297 189 10 25 289 3 293 1.06e-12 68.2

Find 77 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAATTCATTGTAAGTAAA+TGG 0.199825 3.4:-59668578 None:intergenic
AAAGCCCTATCAAATACTTT+TGG 0.232889 3.4:+59663786 MS.gene008696:CDS
AGTTGTTCCAAAAGGGTTAT+TGG 0.236584 3.4:-59663701 None:intergenic
ATATGCTACTTTGTATTTCC+TGG 0.273322 3.4:+59668521 MS.gene008696:CDS
TTGCTGTCCGAGATGGAGTT+AGG 0.309645 3.4:-59663820 None:intergenic
CAAAATATCAATTGGGTTGA+AGG 0.317985 3.4:+59663857 MS.gene008696:CDS
TCCACCCACTGATGTTGGTT+GGG 0.318462 3.4:+59667005 MS.gene008696:CDS
TGGTGTTCCAATAACCCTTT+TGG 0.323371 3.4:+59663694 MS.gene008696:CDS
AAGGTCCTCAAAATATCAAT+TGG 0.335613 3.4:+59663849 MS.gene008696:CDS
GAGTCTTCAACTATGTCATT+TGG 0.347839 3.4:-59663578 None:intergenic
AGTCCACTCACATGGTCATC+TGG 0.350321 3.4:-59667072 None:intergenic
GAAATAAAGTAGGGCTTTCA+AGG 0.356516 3.4:+59668633 MS.gene008696:CDS
CTATGTCATTTGGGACATAA+AGG 0.358496 3.4:-59663568 None:intergenic
GGACAAAGAAAATAGTTGTT+TGG 0.363936 3.4:-59663735 None:intergenic
GTACCCCAAAAGTATTTGAT+AGG 0.370868 3.4:-59663791 None:intergenic
GGATGAGGCTTGCAAGGAAT+GGG 0.382366 3.4:+59663649 MS.gene008696:CDS
AGTCTTCAACTATGTCATTT+GGG 0.386106 3.4:-59663577 None:intergenic
CTATTCCGTTTGGTTAATCA+TGG 0.393642 3.4:+59663674 MS.gene008696:CDS
AATCTTGAAGTTGTTCCAAA+AGG 0.399640 3.4:-59663709 None:intergenic
TTGTAGCAATTCTTGAAAGA+TGG 0.402223 3.4:-59666885 None:intergenic
TTGAGATCTATGATTGGAAT+AGG 0.408534 3.4:-59663605 None:intergenic
AAAACTCTTGGAAATAAAGT+AGG 0.412345 3.4:+59668623 MS.gene008696:CDS
ATGGTCATCTGGGTTCAATA+TGG 0.419496 3.4:-59667061 None:intergenic
CACTGATGTTGGTTGGGGCA+TGG 0.426417 3.4:+59667011 MS.gene008696:CDS
GTCTTCTTCACAATTAGCCT+TGG 0.435504 3.4:-59668667 None:intergenic
TTCCTTCACTCGAGTCCATC+AGG 0.436361 3.4:+59663924 MS.gene008696:CDS
CAACAAGACATCAAAACTCT+TGG 0.439073 3.4:+59668611 MS.gene008696:CDS
TTATTGTGTTGGCGGAGAAT+TGG 0.456938 3.4:-59663533 None:intergenic
CCACCCACTGATGTTGGTTG+GGG 0.459100 3.4:+59667006 MS.gene008696:CDS
TGTAGCAATTCTTGAAAGAT+GGG 0.463737 3.4:-59666884 None:intergenic
ATCCACCCACTGATGTTGGT+TGG 0.465205 3.4:+59667004 MS.gene008696:CDS
TACAACTTTATTTGAAGCAA+TGG 0.466551 3.4:+59666903 MS.gene008696:CDS
TGGATGAGGCTTGCAAGGAA+TGG 0.468427 3.4:+59663648 MS.gene008696:CDS
GGAATGGGGTCTATTCCGTT+TGG 0.472456 3.4:+59663664 MS.gene008696:CDS
ATCTTGAAGTTGTTCCAAAA+GGG 0.472517 3.4:-59663708 None:intergenic
ACAATCAATGTGTTGGAAGC+TGG 0.474366 3.4:-59667132 None:intergenic
GTCCGAGATGGAGTTAGGGC+AGG 0.475414 3.4:-59663815 None:intergenic
AAGCACTTGAGATCTATGAT+TGG 0.478835 3.4:-59663611 None:intergenic
TTGTGTTGGCGGAGAATTGG+AGG 0.480117 3.4:-59663530 None:intergenic
GTGGTTGGTTATTGTGTTGG+CGG 0.485329 3.4:-59663541 None:intergenic
TTTGTTATTGCTGTCCGAGA+TGG 0.494303 3.4:-59663827 None:intergenic
AAGTTCTCAAAGAGGATCAA+TGG 0.498416 3.4:+59667097 MS.gene008696:CDS
TGCTGTCCGAGATGGAGTTA+GGG 0.499944 3.4:-59663819 None:intergenic
AAATTTGGATGAGGCTTGCA+AGG 0.500207 3.4:+59663643 MS.gene008696:CDS
GAACACCATGATTAACCAAA+CGG 0.502518 3.4:-59663679 None:intergenic
TTTGTGGTTGGTTATTGTGT+TGG 0.504282 3.4:-59663544 None:intergenic
GTCCACTCACATGGTCATCT+GGG 0.515908 3.4:-59667071 None:intergenic
AGGTCCTCAAAATATCAATT+GGG 0.518990 3.4:+59663850 MS.gene008696:CDS
AAACTCTTGGAAATAAAGTA+GGG 0.529119 3.4:+59668624 MS.gene008696:CDS
AACACATTGATTGTCAACCT+TGG 0.531876 3.4:+59667141 MS.gene008696:CDS
CGAGTGAAGGAAGTTGATGT+TGG 0.538431 3.4:-59663913 None:intergenic
CGTTATCCACCCACTGATGT+TGG 0.551489 3.4:+59667000 MS.gene008696:CDS
TCTCGGACAGCAATAACAAA+AGG 0.552248 3.4:+59663830 MS.gene008696:CDS
TCCGAGATGGAGTTAGGGCA+GGG 0.562588 3.4:-59663814 None:intergenic
TACCCCAAAAGTATTTGATA+GGG 0.565928 3.4:-59663790 None:intergenic
AGGTAGAGAAAGATATAGAG+AGG 0.566840 3.4:+59668492 MS.gene008696:CDS
CCCCTGCCCTAACTCCATCT+CGG 0.575730 3.4:+59663813 MS.gene008696:CDS
TCAATCACAACGTCTTCACC+AGG 0.577291 3.4:-59668539 None:intergenic
AAGGTTGACAATCAATGTGT+TGG 0.579083 3.4:-59667139 None:intergenic
CAACCTTGGTGACATGATGC+AGG 0.582770 3.4:+59667155 MS.gene008696:CDS
TTGGCGGAGAATTGGAGGGT+AGG 0.589074 3.4:-59663525 None:intergenic
TACCTGATGGACTCGAGTGA+AGG 0.596137 3.4:-59663926 None:intergenic
TGTGTTGGCGGAGAATTGGA+GGG 0.605017 3.4:-59663529 None:intergenic
ATGCCCCAACCAACATCAGT+GGG 0.610403 3.4:-59667009 None:intergenic
GATGAGGCTTGCAAGGAATG+GGG 0.613568 3.4:+59663650 MS.gene008696:CDS
TCAAGGTTTCAGAAGAACCA+AGG 0.622530 3.4:+59668650 MS.gene008696:CDS
TGATGTTGGTTGGGGCATGG+AGG 0.624574 3.4:+59667014 MS.gene008696:CDS
CCGAGATGGAGTTAGGGCAG+GGG 0.628081 3.4:-59663813 None:intergenic
GAACTTGAAGTCCACTCACA+TGG 0.631164 3.4:-59667080 None:intergenic
GAGTGTGTCACATAGAGTGA+AGG 0.631791 3.4:+59668472 MS.gene008696:CDS
CATGCCCCAACCAACATCAG+TGG 0.640789 3.4:-59667010 None:intergenic
CCCCAACCAACATCAGTGGG+TGG 0.649461 3.4:-59667006 None:intergenic
AACCCAGATGACCATGTGAG+TGG 0.658082 3.4:+59667069 MS.gene008696:CDS
TGGACTTCAAGTTCTCAAAG+AGG 0.668900 3.4:+59667089 MS.gene008696:CDS
AGACCTGCATCATGTCACCA+AGG 0.690147 3.4:-59667158 None:intergenic
TCATATTTATCAGAAAACAC+AGG 0.698396 3.4:+59666961 MS.gene008696:CDS
AAGTGAGAGAGTTGACACAA+TGG 0.709390 3.4:-59663890 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATAACATAGATTTA+TGG + chr3.4:59664570-59664589 MS.gene008696:intron 10.0%
!! AAATTATAACATAGATTTAT+GGG + chr3.4:59664571-59664590 MS.gene008696:intron 10.0%
!! AATAATAATAAACTAACAAA+TGG + chr3.4:59664278-59664297 MS.gene008696:intron 10.0%
!! AGATTAATTTAACATATAAT+TGG + chr3.4:59666593-59666612 MS.gene008696:intron 10.0%
!! ATGAACAATTATTTATTTAT+AGG - chr3.4:59666183-59666202 None:intergenic 10.0%
!! ATTATTTAAATCTATTCTAA+TGG + chr3.4:59666818-59666837 MS.gene008696:intron 10.0%
!! TTAGAATAGATTTAAATAAT+CGG - chr3.4:59666818-59666837 None:intergenic 10.0%
!!! ACAAAAGTATAAATTAAAAT+TGG - chr3.4:59668309-59668328 None:intergenic 10.0%
!!! TAAACTCTAATAAATTTTAA+TGG - chr3.4:59667630-59667649 None:intergenic 10.0%
!!! TTTTAACTAAATTATCAAAT+TGG - chr3.4:59664313-59664332 None:intergenic 10.0%
!! AAAAATTAAATAAGTGCATA+CGG - chr3.4:59667831-59667850 None:intergenic 15.0%
!! AAAACAATTGAAAAGAAAAT+TGG + chr3.4:59666119-59666138 MS.gene008696:intron 15.0%
!! AAATGCTATTAAAATTAAGT+AGG + chr3.4:59665360-59665379 MS.gene008696:intron 15.0%
!! AAATGCTATTAAAATTAAGT+AGG - chr3.4:59665379-59665360 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+GGG + chr3.4:59665361-59665380 MS.gene008696:intron 15.0%
!! AATGCTATTAAAATTAAGTA+GGG - chr3.4:59665380-59665361 None:intergenic 15.0%
!! ACTTTCCTATAATAAAAAAA+AGG + chr3.4:59666222-59666241 MS.gene008696:intron 15.0%
!! AGATAAAAAGTAATAAAATC+TGG - chr3.4:59665139-59665158 None:intergenic 15.0%
!! GTTAAAAAAAACTAATTTGA+AGG + chr3.4:59664326-59664345 MS.gene008696:intron 15.0%
!! TCATTACTCATAATTTAATT+TGG + chr3.4:59667191-59667210 MS.gene008696:intron 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG + chr3.4:59665270-59665289 MS.gene008696:intron 15.0%
!! TTCTTTCAAAAAAAAAAAGT+AGG + chr3.4:59666307-59666326 MS.gene008696:intron 15.0%
!!! AACTTATTCTAGAAAAATAA+AGG + chr3.4:59668329-59668348 MS.gene008696:intron 15.0%
!!! AATCAAAATCTCTATTTTTT+GGG - chr3.4:59667280-59667299 None:intergenic 15.0%
!!! ACTTATTCTAGAAAAATAAA+GGG + chr3.4:59668330-59668349 MS.gene008696:intron 15.0%
!!! AGTGTATCTTTTTATTTAAT+AGG + chr3.4:59664857-59664876 MS.gene008696:intron 15.0%
!!! ATTACTAAGCATTATTTTTA+AGG + chr3.4:59665596-59665615 MS.gene008696:intron 15.0%
!!! ATTTTCTTTTCAATTGTTTT+TGG - chr3.4:59666119-59666138 None:intergenic 15.0%
!!! ATTTTTTATAGATGATGAAA+AGG - chr3.4:59666085-59666104 None:intergenic 15.0%
!!! CTATTCTAATGTATTTATTT+TGG + chr3.4:59668421-59668440 MS.gene008696:intron 15.0%
!!! CTTTTTTTCTTTGTAAAATA+TGG + chr3.4:59667434-59667453 MS.gene008696:intron 15.0%
!!! TAATATTTGAGTGTTATTTT+TGG - chr3.4:59667748-59667767 None:intergenic 15.0%
!!! TAATGTATTTATTTTGGTTT+AGG + chr3.4:59668427-59668446 MS.gene008696:intron 15.0%
!!! TATTTTACAAAGAAAAAAAG+TGG - chr3.4:59667434-59667453 None:intergenic 15.0%
!!! TCTATCTTCAAATATTTTTT+TGG - chr3.4:59666333-59666352 None:intergenic 15.0%
!!! TGTTAAATTAATCTTTTTTC+AGG - chr3.4:59666587-59666606 None:intergenic 15.0%
!!! TTGTCTTTTCATTTTTTTTA+AGG - chr3.4:59665693-59665712 None:intergenic 15.0%
!!! TTGTGTGTATAAATTTTTAA+TGG + chr3.4:59666053-59666072 MS.gene008696:intron 15.0%
!!! TTTGTCCTTTTTTTTATTAT+AGG - chr3.4:59666230-59666249 None:intergenic 15.0%
!! AAAAAATGAAAAGACAAACA+TGG + chr3.4:59665696-59665715 MS.gene008696:intron 20.0%
!! AAAATATAAGACACAAAAGA+TGG - chr3.4:59664528-59664547 None:intergenic 20.0%
!! AAAATTAAATAAGTGCATAC+GGG - chr3.4:59667830-59667849 None:intergenic 20.0%
!! AAACAAATTTGAATTGAGTA+GGG - chr3.4:59665009-59665028 None:intergenic 20.0%
!! ATAGAGTTGACAAATATTAT+TGG - chr3.4:59665436-59665455 None:intergenic 20.0%
!! ATTACAAGTCTTAATATTAG+AGG + chr3.4:59667764-59667783 MS.gene008696:intron 20.0%
!! ATTACTACTACTATTATGAA+GGG + chr3.4:59664068-59664087 MS.gene008696:intron 20.0%
!! ATTTAGTCTGAAAATAATTG+TGG + chr3.4:59664453-59664472 MS.gene008696:intron 20.0%
!! GAATTATATAGGACTTAAAA+TGG + chr3.4:59666413-59666432 MS.gene008696:intron 20.0%
!! GTTGAAATAAGAATTGTAAA+TGG - chr3.4:59665966-59665985 None:intergenic 20.0%
!! TAAAAAACCATGAAAAAAGA+TGG - chr3.4:59666629-59666648 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG - chr3.4:59665010-59665029 None:intergenic 20.0%
!! TAATAGGAGAGAATAATATT+GGG + chr3.4:59664873-59664892 MS.gene008696:intron 20.0%
!! TAGAGTTGACAAATATTATT+GGG - chr3.4:59665435-59665454 None:intergenic 20.0%
!! TATTACTACTACTATTATGA+AGG + chr3.4:59664067-59664086 MS.gene008696:intron 20.0%
!! TGAGTTTAATTATGTTAACA+AGG - chr3.4:59665522-59665541 None:intergenic 20.0%
!! TTAATAGGAGAGAATAATAT+TGG + chr3.4:59664872-59664891 MS.gene008696:intron 20.0%
!! TTCTGAATGAAAATGAAATT+TGG - chr3.4:59665639-59665658 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG - chr3.4:59665104-59665123 None:intergenic 20.0%
!!! ACAATTTCGACAATTTTTAT+CGG - chr3.4:59665988-59666007 None:intergenic 20.0%
!!! ATCTTTTGTGTCTTATATTT+TGG + chr3.4:59664527-59664546 MS.gene008696:intron 20.0%
!!! ATTAAAATTCATTTTCTAGC+GGG + chr3.4:59665546-59665565 MS.gene008696:intron 20.0%
!!! ATTTATCTTTTGATTTCTGA+TGG - chr3.4:59664776-59664795 None:intergenic 20.0%
!!! CATTAAAATTCATTTTCTAG+CGG + chr3.4:59665545-59665564 MS.gene008696:intron 20.0%
!!! CTTATTCTAGAAAAATAAAG+GGG + chr3.4:59668331-59668350 MS.gene008696:intron 20.0%
!!! GAATCAAAATCTCTATTTTT+TGG - chr3.4:59667281-59667300 None:intergenic 20.0%
!!! TATTATTCCATCTTTTTTCA+TGG + chr3.4:59666619-59666638 MS.gene008696:intron 20.0%
!!! TCATTAATATTTTCCATTGA+TGG + chr3.4:59664406-59664425 MS.gene008696:intron 20.0%
!!! TCTTTTGTGTCTTATATTTT+GGG + chr3.4:59664528-59664547 MS.gene008696:intron 20.0%
!!! TGAGACTTCATAAATTTTAA+CGG + chr3.4:59667670-59667689 MS.gene008696:intron 20.0%
!!! TTAAGTTTTTTTGTGTTATG+TGG + chr3.4:59666370-59666389 MS.gene008696:intron 20.0%
!!! TTATTCTAGAAAAATAAAGG+GGG + chr3.4:59668332-59668351 MS.gene008696:intron 20.0%
!!! TTCTTTCTAATTTGTGTAAA+AGG + chr3.4:59664430-59664449 MS.gene008696:intron 20.0%
! AAAACTCTTGGAAATAAAGT+AGG + chr3.4:59668623-59668642 MS.gene008696:CDS 25.0%
! AAACTCTTGGAAATAAAGTA+GGG + chr3.4:59668624-59668643 MS.gene008696:CDS 25.0%
! AAATCTGATAATCCATTTCA+AGG - chr3.4:59664710-59664729 None:intergenic 25.0%
! AAATTAAATAAGTGCATACG+GGG - chr3.4:59667829-59667848 None:intergenic 25.0%
! AAATTTATACACACAAGTTG+AGG - chr3.4:59666049-59666068 None:intergenic 25.0%
! ACAAAGAAAAAAAGTGGTAT+TGG - chr3.4:59667428-59667447 None:intergenic 25.0%
! ACCATTTCTCAACAATAAAT+AGG + chr3.4:59668368-59668387 MS.gene008696:intron 25.0%
! ACTAAAATAGACATAGCTAA+AGG + chr3.4:59667998-59668017 MS.gene008696:intron 25.0%
! AGTGCAGAAAAACAAAATTA+GGG - chr3.4:59664976-59664995 None:intergenic 25.0%
! ATTGGATGGAAGAATTATAT+AGG + chr3.4:59666402-59666421 MS.gene008696:intron 25.0%
! ATTTGAAGGATTTAGTCAAA+TGG + chr3.4:59664340-59664359 MS.gene008696:intron 25.0%
! CTAACGATTGAATCAAATAA+AGG - chr3.4:59667714-59667733 None:intergenic 25.0%
! CTATCTTCAAAGATATTTAC+AGG - chr3.4:59666286-59666305 None:intergenic 25.0%
! CTGAATTCATTGTAAGTAAA+TGG - chr3.4:59668581-59668600 None:intergenic 25.0%
! CTTCTTATCAAATAGTATAG+CGG + chr3.4:59665462-59665481 MS.gene008696:intron 25.0%
! GAATTGATAAAGGACAATAA+AGG + chr3.4:59668022-59668041 MS.gene008696:intron 25.0%
! TAAACTAACAAATGGTCAAT+AGG + chr3.4:59664286-59664305 MS.gene008696:intron 25.0%
! TATAACATAGATTTATGGGT+CGG + chr3.4:59664575-59664594 MS.gene008696:intron 25.0%
! TCATATTTATCAGAAAACAC+AGG + chr3.4:59666961-59666980 MS.gene008696:CDS 25.0%
! TCCTATTTATTGTTGAGAAA+TGG - chr3.4:59668372-59668391 None:intergenic 25.0%
! TTGTTCATTGTAAGAAGAAA+AGG + chr3.4:59666195-59666214 MS.gene008696:intron 25.0%
! TTTATTGTATGTCTCTTTCT+TGG + chr3.4:59664502-59664521 MS.gene008696:intron 25.0%
!! CAAATGTTATCTAAAACAGT+CGG - chr3.4:59665722-59665741 None:intergenic 25.0%
!! CTTTATTTGATTCAATCGTT+AGG + chr3.4:59667712-59667731 MS.gene008696:intron 25.0%
!! TACAACTTTATTTGAAGCAA+TGG + chr3.4:59666903-59666922 MS.gene008696:CDS 25.0%
!! TGAGAGAATTGATTTATGTT+TGG + chr3.4:59667939-59667958 MS.gene008696:intron 25.0%
!!! AAAAAAAGAGAAGTGTTGTT+TGG - chr3.4:59667491-59667510 None:intergenic 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG + chr3.4:59665299-59665318 MS.gene008696:intron 25.0%
!!! ACAACACTTCTCTTTTTTTA+AGG + chr3.4:59667492-59667511 MS.gene008696:intron 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG + chr3.4:59665298-59665317 MS.gene008696:intron 25.0%
!!! TATGAAGGGATTATTTTTTG+AGG + chr3.4:59664082-59664101 MS.gene008696:intron 25.0%
!!! TCAGACTTTTATATTAGTCT+TGG + chr3.4:59665835-59665854 MS.gene008696:intron 25.0%
AAAAGTCTGACATCTTTAAC+CGG - chr3.4:59665825-59665844 None:intergenic 30.0%
AAATATCCGTCTCATAGTTA+AGG + chr3.4:59666456-59666475 MS.gene008696:intron 30.0%
AAGGTCCTCAAAATATCAAT+TGG + chr3.4:59663849-59663868 MS.gene008696:CDS 30.0%
AATCTTGAAGTTGTTCCAAA+AGG - chr3.4:59663712-59663731 None:intergenic 30.0%
AATTAGAAAGAAGCCATCAA+TGG - chr3.4:59664422-59664441 None:intergenic 30.0%
AATTTGGTCCAATTTATGAG+AGG - chr3.4:59665623-59665642 None:intergenic 30.0%
ACACCAAAACACAATAATCA+CGG + chr3.4:59666555-59666574 MS.gene008696:intron 30.0%
ACTTTATCTCTCTATTGCTA+TGG + chr3.4:59667394-59667413 MS.gene008696:intron 30.0%
AGAACACAAAAATTTGGATG+AGG + chr3.4:59663634-59663653 MS.gene008696:CDS 30.0%
AGCTAAAGGAGAATTGATAA+AGG + chr3.4:59668012-59668031 MS.gene008696:intron 30.0%
AGGTCCTCAAAATATCAATT+GGG + chr3.4:59663850-59663869 MS.gene008696:CDS 30.0%
AGTCTGAAAATAATTGTGGA+AGG + chr3.4:59664457-59664476 MS.gene008696:intron 30.0%
ATCTTGAAGTTGTTCCAAAA+GGG - chr3.4:59663711-59663730 None:intergenic 30.0%
CAAATAAGTTGTCACCAAAT+TGG + chr3.4:59667461-59667480 MS.gene008696:intron 30.0%
CAAGATTAGAACACTATGAA+AGG - chr3.4:59665236-59665255 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG - chr3.4:59664977-59664996 None:intergenic 30.0%
CTTAACATGAATTTCCACAA+AGG - chr3.4:59665572-59665591 None:intergenic 30.0%
GGACAAAGAAAATAGTTGTT+TGG - chr3.4:59663738-59663757 None:intergenic 30.0%
GTGCTTAGAACACAAAAATT+TGG + chr3.4:59663628-59663647 MS.gene008696:CDS 30.0%
TGTAGCAATTCTTGAAAGAT+GGG - chr3.4:59666887-59666906 None:intergenic 30.0%
TTAATATTGTGCATACCTGA+TGG - chr3.4:59663942-59663961 None:intergenic 30.0%
TTACCTTTGAATCAAGTATG+AGG + chr3.4:59667584-59667603 MS.gene008696:intron 30.0%
TTGAGATCTATGATTGGAAT+AGG - chr3.4:59663608-59663627 None:intergenic 30.0%
TTGTAGCAATTCTTGAAAGA+TGG - chr3.4:59666888-59666907 None:intergenic 30.0%
! AAACCGTGATTATTGTGTTT+TGG - chr3.4:59666561-59666580 None:intergenic 30.0%
! AAAGCCCTATCAAATACTTT+TGG + chr3.4:59663786-59663805 MS.gene008696:CDS 30.0%
! AAGCCCTATCAAATACTTTT+GGG + chr3.4:59663787-59663806 MS.gene008696:CDS 30.0%
! AGTCTTCAACTATGTCATTT+GGG - chr3.4:59663580-59663599 None:intergenic 30.0%
! GTTATAATTTTCCACATGCA+TGG - chr3.4:59664561-59664580 None:intergenic 30.0%
! TCAACCCAATTGATATTTTG+AGG - chr3.4:59663857-59663876 None:intergenic 30.0%
! TGAGAATGTGACATTTTGTT+TGG + chr3.4:59664624-59664643 MS.gene008696:intron 30.0%
! TTTAAGGTCCTCTCATAAAT+TGG + chr3.4:59665612-59665631 MS.gene008696:intron 30.0%
!! ATATGCTACTTTGTATTTCC+TGG + chr3.4:59668521-59668540 MS.gene008696:CDS 30.0%
!! CAAAATATCAATTGGGTTGA+AGG + chr3.4:59663857-59663876 MS.gene008696:CDS 30.0%
!! GTTAACTTTCTGTTTTTCAG+AGG - chr3.4:59666537-59666556 None:intergenic 30.0%
!! GTTTTGACCAATTGGATATT+TGG + chr3.4:59664673-59664692 MS.gene008696:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + chr3.4:59665392-59665411 MS.gene008696:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr3.4:59665411-59665392 None:intergenic 30.0%
!! TACCCCAAAAGTATTTGATA+GGG - chr3.4:59663793-59663812 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr3.4:59665391-59665410 MS.gene008696:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr3.4:59665410-59665391 None:intergenic 30.0%
!!! TGCTTCTTGTTTTGATTCAA+AGG - chr3.4:59663759-59663778 None:intergenic 30.0%
!!! TTTTAGAATGAGTGTGTGTT+TGG + chr3.4:59667847-59667866 MS.gene008696:intron 30.0%
!!! TTTTTGGCTAGAATTGCTTT+TGG + chr3.4:59668188-59668207 MS.gene008696:intron 30.0%
AAGCACTTGAGATCTATGAT+TGG - chr3.4:59663614-59663633 None:intergenic 35.0%
AAGGTTGACAATCAATGTGT+TGG - chr3.4:59667142-59667161 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG + chr3.4:59665376-59665395 MS.gene008696:intron 35.0%
AAGTAGGGACTAAACTTACA+AGG - chr3.4:59665395-59665376 None:intergenic 35.0%
AAGTTCTCAAAGAGGATCAA+TGG + chr3.4:59667097-59667116 MS.gene008696:CDS 35.0%
AGGTAGAGAAAGATATAGAG+AGG + chr3.4:59668492-59668511 MS.gene008696:CDS 35.0%
AGTTGTTCCAAAAGGGTTAT+TGG - chr3.4:59663704-59663723 None:intergenic 35.0%
CAAAAACAACGTGTTTGGTT+TGG - chr3.4:59668174-59668193 None:intergenic 35.0%
CAACAAGACATCAAAACTCT+TGG + chr3.4:59668611-59668630 MS.gene008696:CDS 35.0%
CATTAGTAAAAGCCTTGCAA+AGG - chr3.4:59666854-59666873 None:intergenic 35.0%
CTATTCCGTTTGGTTAATCA+TGG + chr3.4:59663674-59663693 MS.gene008696:CDS 35.0%
GAAATAAAGTAGGGCTTTCA+AGG + chr3.4:59668633-59668652 MS.gene008696:CDS 35.0%
GAACACCATGATTAACCAAA+CGG - chr3.4:59663682-59663701 None:intergenic 35.0%
GACTTGAGTGCAGAATATTT+GGG - chr3.4:59666264-59666283 None:intergenic 35.0%
GAGTCTTCAACTATGTCATT+TGG - chr3.4:59663581-59663600 None:intergenic 35.0%
GATTGTGCAAATCCTTGAAA+TGG + chr3.4:59664695-59664714 MS.gene008696:intron 35.0%
GCACAATCCAAATATCCAAT+TGG - chr3.4:59664683-59664702 None:intergenic 35.0%
GTTATGTGGTTTCTCTACAT+TGG + chr3.4:59666384-59666403 MS.gene008696:intron 35.0%
TATCCAATTGGTCAAAACAC+CGG - chr3.4:59664671-59664690 None:intergenic 35.0%
TCACCTCATACTTGATTCAA+AGG - chr3.4:59667590-59667609 None:intergenic 35.0%
TGCTAATGTACTACTACTCA+GGG - chr3.4:59668261-59668280 None:intergenic 35.0%
TTAATGTCCCTTAAACCACT+TGG - chr3.4:59667561-59667580 None:intergenic 35.0%
TTGCAAAAGTTGTCACTAGA+TGG - chr3.4:59667342-59667361 None:intergenic 35.0%
TTGCTAATGTACTACTACTC+AGG - chr3.4:59668262-59668281 None:intergenic 35.0%
! AACACATTGATTGTCAACCT+TGG + chr3.4:59667141-59667160 MS.gene008696:CDS 35.0%
! AGCCCTATCAAATACTTTTG+GGG + chr3.4:59663788-59663807 MS.gene008696:CDS 35.0%
! ATACACACAAGTTGAGGAAT+TGG - chr3.4:59666043-59666062 None:intergenic 35.0%
! ATCTTGTTTAAACTGCACGT+TGG - chr3.4:59664745-59664764 None:intergenic 35.0%
! CTATGTCATTTGGGACATAA+AGG - chr3.4:59663571-59663590 None:intergenic 35.0%
! CTTTGCAAGGCTTTTACTAA+TGG + chr3.4:59666852-59666871 MS.gene008696:intron 35.0%
! GCAGAATATTTGGGATTACT+GGG - chr3.4:59666255-59666274 None:intergenic 35.0%
! TGCAGAATATTTGGGATTAC+TGG - chr3.4:59666256-59666275 None:intergenic 35.0%
! TGTTGTTTGGACAACCAATT+TGG - chr3.4:59667478-59667497 None:intergenic 35.0%
! TTCTAGAAAAGCTAGAAGCT+AGG + chr3.4:59668095-59668114 MS.gene008696:intron 35.0%
! TTTGTGGTTGGTTATTGTGT+TGG - chr3.4:59663547-59663566 None:intergenic 35.0%
!! CAAACCAAACACGTTGTTTT+TGG + chr3.4:59668172-59668191 MS.gene008696:intron 35.0%
!! GAAAAAAAGTGGTATTGGCA+CGG - chr3.4:59667423-59667442 None:intergenic 35.0%
!! GTACCCCAAAAGTATTTGAT+AGG - chr3.4:59663794-59663813 None:intergenic 35.0%
!! TTTGGGACATAAAGGTTTTG+TGG - chr3.4:59663563-59663582 None:intergenic 35.0%
!!! GTTTTTTTAGAGAGAGAGTC+CGG + chr3.4:59665803-59665822 MS.gene008696:intron 35.0%
!!! TTGTTTTGAGATTCAGCTCA+AGG - chr3.4:59666936-59666955 None:intergenic 35.0%
AAATTTGGATGAGGCTTGCA+AGG + chr3.4:59663643-59663662 MS.gene008696:CDS 40.0%
AAGTGAGAGAGTTGACACAA+TGG - chr3.4:59663893-59663912 None:intergenic 40.0%
ACAATCAATGTGTTGGAAGC+TGG - chr3.4:59667135-59667154 None:intergenic 40.0%
AGATTTATGGGTCGGTTGTT+GGG + chr3.4:59664583-59664602 MS.gene008696:intron 40.0%
AGCTAGGATTTGTAGCTTCA+TGG + chr3.4:59668111-59668130 MS.gene008696:intron 40.0%
ATGGTCATCTGGGTTCAATA+TGG - chr3.4:59667064-59667083 None:intergenic 40.0%
CCATTGCCTTAACTATGAGA+CGG - chr3.4:59666465-59666484 None:intergenic 40.0%
CCTACAACCAAGTGGTTTAA+GGG + chr3.4:59667551-59667570 MS.gene008696:intron 40.0%
CTAGCCAAAAACAACGTGTT+TGG - chr3.4:59668179-59668198 None:intergenic 40.0%
GGACTTGAGTGCAGAATATT+TGG - chr3.4:59666265-59666284 None:intergenic 40.0%
GGATTCTCTCCTCAACTTTA+TGG - chr3.4:59667533-59667552 None:intergenic 40.0%
GGTTACATGTTTCCTTTGCA+AGG + chr3.4:59666839-59666858 MS.gene008696:intron 40.0%
GTCTCATGACCATAAAGTTG+AGG + chr3.4:59667521-59667540 MS.gene008696:intron 40.0%
TAGATTTATGGGTCGGTTGT+TGG + chr3.4:59664582-59664601 MS.gene008696:intron 40.0%
TCAAGGTTTCAGAAGAACCA+AGG + chr3.4:59668650-59668669 MS.gene008696:CDS 40.0%
TCCTACAACCAAGTGGTTTA+AGG + chr3.4:59667550-59667569 MS.gene008696:intron 40.0%
TCTCGGACAGCAATAACAAA+AGG + chr3.4:59663830-59663849 MS.gene008696:CDS 40.0%
TGTGGTTTCTCTACATTGGA+TGG + chr3.4:59666388-59666407 MS.gene008696:intron 40.0%
! GCACTGTAGAGAATTGCTTT+TGG + chr3.4:59668210-59668229 MS.gene008696:intron 40.0%
! GCTTCATGGAGAATTGCTTT+TGG + chr3.4:59668125-59668144 MS.gene008696:intron 40.0%
! TGGACTTCAAGTTCTCAAAG+AGG + chr3.4:59667089-59667108 MS.gene008696:CDS 40.0%
! TGGTGTTCCAATAACCCTTT+TGG + chr3.4:59663694-59663713 MS.gene008696:CDS 40.0%
! TTATTGTGTTGGCGGAGAAT+TGG - chr3.4:59663536-59663555 None:intergenic 40.0%
!! GGACATAAAGGTTTTGTGGT+TGG - chr3.4:59663559-59663578 None:intergenic 40.0%
!! GTAGAGAATTGCTTTTGGCT+GGG + chr3.4:59668215-59668234 MS.gene008696:intron 40.0%
!! TCATGGAGAATTGCTTTTGG+AGG + chr3.4:59668128-59668147 MS.gene008696:intron 40.0%
!! TGTAGAGAATTGCTTTTGGC+TGG + chr3.4:59668214-59668233 MS.gene008696:intron 40.0%
!! TTTGTTATTGCTGTCCGAGA+TGG - chr3.4:59663830-59663849 None:intergenic 40.0%
CCCAATAACACTGCATGAAC+CGG + chr3.4:59664649-59664668 MS.gene008696:intron 45.0%
CCCTTAAACCACTTGGTTGT+AGG - chr3.4:59667554-59667573 None:intergenic 45.0%
CCGTCTCATAGTTAAGGCAA+TGG + chr3.4:59666462-59666481 MS.gene008696:intron 45.0%
GAACTTGAAGTCCACTCACA+TGG - chr3.4:59667083-59667102 None:intergenic 45.0%
GAGAGAATCCTACAACCAAG+TGG + chr3.4:59667543-59667562 MS.gene008696:intron 45.0%
GAGTGTGTCACATAGAGTGA+AGG + chr3.4:59668472-59668491 MS.gene008696:CDS 45.0%
TCAATCACAACGTCTTCACC+AGG - chr3.4:59668542-59668561 None:intergenic 45.0%
! ACCGGTTCATGCAGTGTTAT+TGG - chr3.4:59664653-59664672 None:intergenic 45.0%
! CCGGTTCATGCAGTGTTATT+GGG - chr3.4:59664652-59664671 None:intergenic 45.0%
! GTGGTTGGTTATTGTGTTGG+CGG - chr3.4:59663544-59663563 None:intergenic 45.0%
!! CGAGTGAAGGAAGTTGATGT+TGG - chr3.4:59663916-59663935 None:intergenic 45.0%
!!! GAACCGGTGTTTTGACCAAT+TGG + chr3.4:59664665-59664684 MS.gene008696:intron 45.0%
!! ATTATTATATTATATTATGA+AGG + chr3.4:59663993-59664012 MS.gene008696:intron 5.0%
!! TTATTATATTATATTATGAA+GGG + chr3.4:59663994-59664013 MS.gene008696:intron 5.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG + chr3.4:59665331-59665350 MS.gene008696:intron 5.0%
!!! TAAGTAAATTTTTTTTTATA+GGG + chr3.4:59665332-59665351 MS.gene008696:intron 5.0%
!!! TTTTAACAAATTTATTTTTT+TGG + chr3.4:59666644-59666663 MS.gene008696:intron 5.0%
AACCCAGATGACCATGTGAG+TGG + chr3.4:59667069-59667088 MS.gene008696:CDS 50.0%
ACTACTACTCAGGGCCTGTT+TGG - chr3.4:59668252-59668271 None:intergenic 50.0%
AGACCTGCATCATGTCACCA+AGG - chr3.4:59667161-59667180 None:intergenic 50.0%
AGTCCACTCACATGGTCATC+TGG - chr3.4:59667075-59667094 None:intergenic 50.0%
ATAAGTGCATACGGGGTCCA+TGG - chr3.4:59667822-59667841 None:intergenic 50.0%
ATCCACCCACTGATGTTGGT+TGG + chr3.4:59667004-59667023 MS.gene008696:CDS 50.0%
ATGCCCCAACCAACATCAGT+GGG - chr3.4:59667012-59667031 None:intergenic 50.0%
CGTTATCCACCCACTGATGT+TGG + chr3.4:59667000-59667019 MS.gene008696:CDS 50.0%
GATGAGGCTTGCAAGGAATG+GGG + chr3.4:59663650-59663669 MS.gene008696:CDS 50.0%
GGAATGGGGTCTATTCCGTT+TGG + chr3.4:59663664-59663683 MS.gene008696:CDS 50.0%
GGATGAGGCTTGCAAGGAAT+GGG + chr3.4:59663649-59663668 MS.gene008696:CDS 50.0%
GTCCACTCACATGGTCATCT+GGG - chr3.4:59667074-59667093 None:intergenic 50.0%
TAAGTGCATACGGGGTCCAT+GGG - chr3.4:59667821-59667840 None:intergenic 50.0%
TGCTGTCCGAGATGGAGTTA+GGG - chr3.4:59663822-59663841 None:intergenic 50.0%
TGGATGAGGCTTGCAAGGAA+TGG + chr3.4:59663648-59663667 MS.gene008696:CDS 50.0%
TGGGAGTTTGTCCATGCATG+TGG + chr3.4:59664547-59664566 MS.gene008696:intron 50.0%
TTCCTTCACTCGAGTCCATC+AGG + chr3.4:59663924-59663943 MS.gene008696:CDS 50.0%
TTGCTGTCCGAGATGGAGTT+AGG - chr3.4:59663823-59663842 None:intergenic 50.0%
! CAACCTTGGTGACATGATGC+AGG + chr3.4:59667155-59667174 MS.gene008696:CDS 50.0%
! TCCACCCACTGATGTTGGTT+GGG + chr3.4:59667005-59667024 MS.gene008696:CDS 50.0%
! TGTGTTGGCGGAGAATTGGA+GGG - chr3.4:59663532-59663551 None:intergenic 50.0%
! TTGTGTTGGCGGAGAATTGG+AGG - chr3.4:59663533-59663552 None:intergenic 50.0%
!! CATTTTCTAGCGGGCCTTTG+TGG + chr3.4:59665555-59665574 MS.gene008696:intron 50.0%
!! TACCTGATGGACTCGAGTGA+AGG - chr3.4:59663929-59663948 None:intergenic 50.0%
AAGTGCATACGGGGTCCATG+GGG - chr3.4:59667820-59667839 None:intergenic 55.0%
ATACGGGGTCCATGGGGATT+AGG - chr3.4:59667814-59667833 None:intergenic 55.0%
CATGCCCCAACCAACATCAG+TGG - chr3.4:59667013-59667032 None:intergenic 55.0%
GAGGCCTAAAGCTGTCGTAC+AGG + chr3.4:59667783-59667802 MS.gene008696:intron 55.0%
GGGCAGAAGCTGAACCAAAC+AGG + chr3.4:59668235-59668254 MS.gene008696:intron 55.0%
TACGGGGTCCATGGGGATTA+GGG - chr3.4:59667813-59667832 None:intergenic 55.0%
TCCGAGATGGAGTTAGGGCA+GGG - chr3.4:59663817-59663836 None:intergenic 55.0%
TTGGCGGAGAATTGGAGGGT+AGG - chr3.4:59663528-59663547 None:intergenic 55.0%
! CACTGATGTTGGTTGGGGCA+TGG + chr3.4:59667011-59667030 MS.gene008696:CDS 55.0%
! CCACCCACTGATGTTGGTTG+GGG + chr3.4:59667006-59667025 MS.gene008696:CDS 55.0%
! TGATGTTGGTTGGGGCATGG+AGG + chr3.4:59667014-59667033 MS.gene008696:CDS 55.0%
CCCCAACCAACATCAGTGGG+TGG - chr3.4:59667009-59667028 None:intergenic 60.0%
CCCCTGCCCTAACTCCATCT+CGG + chr3.4:59663813-59663832 MS.gene008696:CDS 60.0%
CCGAGATGGAGTTAGGGCAG+GGG - chr3.4:59663816-59663835 None:intergenic 60.0%
GTCCGAGATGGAGTTAGGGC+AGG - chr3.4:59663818-59663837 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 59663509 59668676 59663509 ID=MS.gene008696
chr3.4 mRNA 59663509 59668676 59663509 ID=MS.gene008696.t1;Parent=MS.gene008696
chr3.4 exon 59663509 59663945 59663509 ID=MS.gene008696.t1.exon1;Parent=MS.gene008696.t1
chr3.4 CDS 59663509 59663945 59663509 ID=cds.MS.gene008696.t1;Parent=MS.gene008696.t1
chr3.4 exon 59666861 59667176 59666861 ID=MS.gene008696.t1.exon2;Parent=MS.gene008696.t1
chr3.4 CDS 59666861 59667176 59666861 ID=cds.MS.gene008696.t1;Parent=MS.gene008696.t1
chr3.4 exon 59668449 59668676 59668449 ID=MS.gene008696.t1.exon3;Parent=MS.gene008696.t1
chr3.4 CDS 59668449 59668676 59668449 ID=cds.MS.gene008696.t1;Parent=MS.gene008696.t1
Gene Sequence

>MS.gene008696

ATGAACAACTTGGATTCCTACCCTCCAATTCTCCGCCAACACAATAACCAACCACAAAACCTTTATGTCCCAAATGACATAGTTGAAGACTCAGATCCTATTCCAATCATAGATCTCAAGTGCTTAGAACACAAAAATTTGGATGAGGCTTGCAAGGAATGGGGTCTATTCCGTTTGGTTAATCATGGTGTTCCAATAACCCTTTTGGAACAACTTCAAGATTTAACCAAACAACTATTTTCTTTGTCCTTTGAATCAAAACAAGAAGCATGCAATGAAAGCCCTATCAAATACTTTTGGGGTACCCCTGCCCTAACTCCATCTCGGACAGCAATAACAAAAGGTCCTCAAAATATCAATTGGGTTGAAGGTTTTGATGTGCCATTGTGTCAACTCTCTCACTTCCAACATCAACTTCCTTCACTCGAGTCCATCAGGTATGCACAATATTAACAAGTTTATTATTATTTTTATTATTATGATTATTATTATATTATATTATGAAGGGATTATTATTATTATTATTATTATTATTATTATTATTATTATTACTACTACTATTACTACTACTATTATGAAGGGATTATTTTTTGAGGAATTATTATTATTATTATAAGCTGTGTTTCATGATAATGATCACATTTGCAACAAAAAAATTATCGTTTCAAAAACTTATAGTTTAATTTTCAACGTATATTTTACTATCAATTATTATATTTTACTTCTAGTCATAAACATATATTATTTTTTACTTTATATTTATGATGACAATAATAATAAACTAACAAATGGTCAATAGGACCAATTTGATAATTTAGTTAAAAAAAACTAATTTGAAGGATTTAGTCAAATGGACAATAATATTATTTTTTTTACTTGATATTATTGTTGTTATTATCATTAATATTTTCCATTGATGGCTTCTTTCTAATTTGTGTAAAAGGATTTAGTCTGAAAATAATTGTGGAAGGAGAGAGAGAGAGAGAGTATTGTTTTATTGTATGTCTCTTTCTTGGCCATCTTTTGTGTCTTATATTTTGGGAGTTTGTCCATGCATGTGGAAAATTATAACATAGATTTATGGGTCGGTTGTTGGGTGCAAATATTTGTTTTATTGAGAATGTGACATTTTGTTTGGTGCCCAATAACACTGCATGAACCGGTGTTTTGACCAATTGGATATTTGGATTGTGCAAATCCTTGAAATGGATTATCAGATTTGATAGATACTATCCAACGTGCAGTTTAAACAAGATACTATACTCCATCAGAAATCAAAAGATAAATTACTGTTTTTGAGAGAGTGATTTTTTGTTTTTAGCTTTCTATACAATTGAAAATGAGTAGTAGTGTATCTTTTTATTTAATAGGAGAGAATAATATTGGGTTAATTATGTTTCTAGTCCCTATAAAATAGCGACCTTGTAAGTTTAGTCCCTACTTAATTTTAATAGCATTTTTAGTCCCTAATTTTGTTTTTCTGCACTGAGTATTAGTCCCTACTCAATTCAAATTTGTTTAATTTATGCTTAAACTCTTAAATTTTTAAACAATTTTTTGCAGACATGTTTAGAACATTACTAAAAGTTCGTCCGCAAAAAATTATCGCAAAATTTGATTTCTACATCCAGATTTTATTACTTTTTATCTTTAACTTTTGTCGTTTTAAAAAATTCATATTTAATTCATTTCATGTCAGAAAATTCTAAATTTTAGTAAACGAACCTTTCATAGTGTTCTAATCTTGTCTCAAAAAAATCGTTCAAAAATTTAAGAGTTTAAGGATAATTAATCAAACTTTGTTTTAGCAGGGACTAAAATTATAAGTAAATTTTTTTTTATAGGGACTAAAAATGCTATTAAAATTAAGTAGGGACTAAACTTACAAGGTCGCTATTTTATAGGGACTAGAAACATAATTAACCCAATAATATTTGTCAACTCTATTTAATTCTTCTTATCAAATAGTATAGCGGTTAGAACTCGACTATTACATGCATTATACAATATCCTTGTTAACATAATTAAACTCACAACATTAAAATTCATTTTCTAGCGGGCCTTTGTGGAAATTCATGTTAAGCAAAATTACTAAGCATTATTTTTAAGGTCCTCTCATAAATTGGACCAAATTTCATTTTCATTCAGAAAAGAAAACAATCAAGTGAAAAGACAAATATTCCTTAAAAAAAATGAAAAGACAAACATGGCCGACTGTTTTAGATAACATTTGCAATTATTGCTCTCAATGTAAAAAACAAGCAAAAAAAATTATGAGTTAAGTCTAGTTAAATGTTTTTTTAGAGAGAGAGTCCGGTTAAAGATGTCAGACTTTTATATTAGTCTTGGTTTGAAGCACATATATGAGTGATATCTTTTTTTTTAGTGATATCTATATTAATGTTTGATACATCTCAAATATAATTATTTTTAGTTGAAAAAATTTATTAAAAACCATTTACAATTCTTATTTCAACCGATAAAAATTGTCGAAATTGTTTTGCATAAACATTGCGACTAAGATTTAAATTCCAATTCCTCAACTTGTGTGTATAAATTTTTAATGGTCATGACCTTTTCATCATCTATAAAAAATATTGTTATAAACCAAAAACAATTGAAAAGAAAATTGGAACAAAGAAAAAGAATCTTACATGAAGACACAAACTTTCCTATAAATAAATAATTGTTCATTGTAAGAAGAAAAGGACAAACTTTCCTATAATAAAAAAAAGGACAAACTCCCAGTAATCCCAAATATTCTGCACTCAAGTCCTGTAAATATCTTTGAAGATAGATTCTTTCAAAAAAAAAAAGTAGGCCAAAAAAATATTTGAAGATAGATCATATTAAATTTATTTTTAAGTTTTTTTGTGTTATGTGGTTTCTCTACATTGGATGGAAGAATTATATAGGACTTAAAATGGTTGTGACTAAGCATCTCAACAAATATCCGTCTCATAGTTAAGGCAATGGAATAATGTTTGATTGTTGTCGTTTTTATTAAATTAAGTTGATCGCTTTTCCTCTGAAAAACAGAAAGTTAACACCAAAACACAATAATCACGGTTTGTTCCTGAAAAAAGATTAATTTAACATATAATTGGTTATATTATTCCATCTTTTTTCATGGTTTTTTAACAAATTTATTTTTTTGGTACAATTTTTTAACAAATCTTTGTTTTCACATTATTAATATAACGCACAAAGTTATACTAATGCTATGTAAAATTATCTTGACAAAAAAATTCACTGTAAAATTCTATATCTTGTATATCATGTCTTGAATTTAAAGAATTTTTATAACCGATTATTTAAATCTATTCTAATGGTTACATGTTTCCTTTGCAAGGCTTTTACTAATGGAATATGCAACCCATCTTTCAAGAATTGCTACAACTTTATTTGAAGCAATGGTTAAGAACCTTGAGCTGAATCTCAAAACAACAAAGTCATATTTATCAGAAAACACAGGCATCATACGTGTATATCGTTATCCACCCACTGATGTTGGTTGGGGCATGGAGGTTCATACAGATAGTTCAGTTTTGTCCATATTGAACCCAGATGACCATGTGAGTGGACTTCAAGTTCTCAAAGAGGATCAATGGCTCACTGTAAAGCCAGCTTCCAACACATTGATTGTCAACCTTGGTGACATGATGCAGGTCTAAAGTTTTTTTCATTACTCATAATTTAATTTGGTCTGCAATATATATGTGATATTAGTAAATGTAAATATTTTGTTTAGATATACATATATATATACCCAAAAAATAGAGATTTTGATTCTCTTACTTTTTTTTTTTAGAGAAATGATATTTGAACATCCATCTAGTGACAACTTTTGCAACAACTTTCTCTCTCATAGTCACATTACTTTTTACTTTATCTCTCTATTGCTATGGTTTCCGTGCCAATACCACTTTTTTTCTTTGTAAAATATGGTTGTCAAATAAGTTGTCACCAAATTGGTTGTCCAAACAACACTTCTCTTTTTTTAAGGTGTTAAGTCTCATGACCATAAAGTTGAGGAGAGAATCCTACAACCAAGTGGTTTAAGGGACATTAACTTTTACCTTTGAATCAAGTATGAGGTGATTGTGTTCATCATCTTACCATTAAAATTTATTAGAGTTTACAACTTAAAATATATATAAATGAGACTTCATAAATTTTAACGGTGAGATGATGAACATAGACCTTTATTTGATTCAATCGTTAGGTGATTTAAATCCAAAAATAACACTCAAATATTACAAGTCTTAATATTAGAGGCCTAAAGCTGTCGTACAGGCTTTCCCTAATCCCCATGGACCCCGTATGCACTTATTTAATTTTTAGAATGAGTGTGTGTTTGGTTCAGCTTTGAATATAATTGATTCTGACAGAATTGATTCTGATAGAATTGATTCTGACAGAATTGATTCTGAGAGAATTGATTTATGTTTGGATACAATTATGTAGAATTGCTTTTGAATGTATAATTACTAAAATAGACATAGCTAAAGGAGAATTGATAAAGGACAATAAAGGAAAATAATAAGTTGTAATAATAAAATATAATATTTACTGTTTATAATTGATTCTAGAAAAGCTAGAAGCTAGGATTTGTAGCTTCATGGAGAATTGCTTTTGGAGGATAAAAGCAATTCTGAAAAGCCAAACCAAACACGTTGTTTTTGGCTAGAATTGCTTTTGGCACTGTAGAGAATTGCTTTTGGCTGGGCAGAAGCTGAACCAAACAGGCCCTGAGTAGTAGTACATTAGCAAATTATACATTTATGTGTATATTGACCAATTTTAATTTATACTTTTGTAACTTATTCTAGAAAAATAAAGGGGGCAATGTTAAAGTTACCATTTCTCAACAATAAATAGGATTTTATTTTAAAGTTATATAACTATGTGTCTATTCTAATGTATTTATTTTGGTTTAGGCGATTAGCAGCGATAGATACAAGAGTGTGTCACATAGAGTGAAGGTAGAGAAAGATATAGAGAGGATCTCAATATGCTACTTTGTATTTCCTGGTGAAGACGTTGTGATTGAGAGCAACAAGTACAAGCCATTTACTTACAATGAATTCAGAGCACAAGTGCAACAAGACATCAAAACTCTTGGAAATAAAGTAGGGCTTTCAAGGTTTCAGAAGAACCAAGGCTAA
Protein sequence

>MS.gene008696.t1

MNNLDSYPPILRQHNNQPQNLYVPNDIVEDSDPIPIIDLKCLEHKNLDEACKEWGLFRLVNHGVPITLLEQLQDLTKQLFSLSFESKQEACNESPIKYFWGTPALTPSRTAITKGPQNINWVEGFDVPLCQLSHFQHQLPSLESIRLLLMEYATHLSRIATTLFEAMVKNLELNLKTTKSYLSENTGIIRVYRYPPTDVGWGMEVHTDSSVLSILNPDDHVSGLQVLKEDQWLTVKPASNTLIVNLGDMMQAISSDRYKSVSHRVKVEKDIERISICYFVFPGEDVVIESNKYKPFTYNEFRAQVQQDIKTLGNKVGLSRFQKNQG