Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010457.t1 | XP_003611911.1 | 89.7 | 204 | 18 | 1 | 40 | 240 | 36 | 239 | 3.60E-101 | 377.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010457.t1 | Q5ZIR9 | 48.4 | 128 | 42 | 5 | 40 | 166 | 40 | 144 | 4.0e-24 | 113.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010457.t1 | G7KAV6 | 89.7 | 204 | 18 | 1 | 40 | 240 | 36 | 239 | 2.6e-101 | 377.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene41663 | MS.gene010457 | PPI |
MS.gene010457 | MS.gene055526 | PPI |
MS.gene06250 | MS.gene010457 | PPI |
MS.gene013177 | MS.gene010457 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010457.t1 | MTR_5g019300 | 91.358 | 243 | 14 | 3 | 1 | 240 | 1 | 239 | 7.14e-140 | 392 |
MS.gene010457.t1 | MTR_1g021895 | 58.294 | 211 | 76 | 6 | 35 | 238 | 26 | 231 | 1.52e-69 | 213 |
MS.gene010457.t1 | MTR_1g054210 | 51.724 | 87 | 41 | 1 | 39 | 124 | 122 | 208 | 4.42e-29 | 109 |
MS.gene010457.t1 | MTR_8g465910 | 42.400 | 125 | 60 | 3 | 20 | 132 | 25 | 149 | 2.49e-28 | 108 |
MS.gene010457.t1 | MTR_2g090330 | 50.000 | 90 | 40 | 2 | 37 | 121 | 28 | 117 | 3.14e-28 | 105 |
MS.gene010457.t1 | MTR_2g090330 | 50.000 | 90 | 40 | 2 | 37 | 121 | 31 | 120 | 5.22e-28 | 105 |
MS.gene010457.t1 | MTR_2g090325 | 49.000 | 100 | 34 | 2 | 20 | 119 | 11 | 93 | 5.58e-28 | 105 |
MS.gene010457.t1 | MTR_7g093390 | 51.087 | 92 | 43 | 1 | 34 | 125 | 165 | 254 | 3.18e-27 | 108 |
MS.gene010457.t1 | MTR_2g090295 | 42.373 | 118 | 56 | 3 | 10 | 119 | 15 | 128 | 6.87e-26 | 101 |
MS.gene010457.t1 | MTR_1g054260 | 41.085 | 129 | 62 | 3 | 13 | 127 | 57 | 185 | 1.33e-25 | 99.8 |
MS.gene010457.t1 | MTR_1g054280 | 51.190 | 84 | 38 | 3 | 39 | 120 | 76 | 158 | 3.88e-25 | 100 |
MS.gene010457.t1 | MTR_1g054465 | 39.850 | 133 | 62 | 4 | 5 | 119 | 13 | 145 | 4.35e-25 | 98.2 |
MS.gene010457.t1 | MTR_4g029440 | 45.455 | 88 | 47 | 1 | 39 | 125 | 126 | 213 | 7.37e-24 | 99.0 |
MS.gene010457.t1 | MTR_4g029440 | 45.455 | 88 | 47 | 1 | 39 | 125 | 132 | 219 | 7.63e-24 | 99.4 |
MS.gene010457.t1 | MTR_4g088875 | 45.918 | 98 | 42 | 3 | 39 | 125 | 31 | 128 | 2.24e-22 | 92.0 |
MS.gene010457.t1 | MTR_4g088870 | 40.351 | 114 | 56 | 3 | 24 | 125 | 15 | 128 | 2.76e-22 | 90.9 |
MS.gene010457.t1 | MTR_2g013550 | 45.833 | 96 | 42 | 3 | 39 | 125 | 27 | 121 | 4.67e-22 | 91.3 |
MS.gene010457.t1 | MTR_2g061230 | 39.773 | 88 | 52 | 1 | 39 | 125 | 107 | 194 | 5.89e-20 | 85.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010457.t1 | AT2G23780 | 62.673 | 217 | 71 | 6 | 27 | 238 | 16 | 227 | 6.63e-89 | 262 |
MS.gene010457.t1 | AT2G23780 | 62.673 | 217 | 71 | 6 | 27 | 238 | 16 | 227 | 6.63e-89 | 262 |
MS.gene010457.t1 | AT2G23780 | 62.673 | 217 | 71 | 6 | 27 | 238 | 16 | 227 | 6.63e-89 | 262 |
MS.gene010457.t1 | AT1G19310 | 57.212 | 208 | 80 | 5 | 21 | 222 | 5 | 209 | 3.22e-74 | 225 |
MS.gene010457.t1 | AT1G74990 | 50.746 | 134 | 61 | 4 | 27 | 157 | 4 | 135 | 3.42e-41 | 138 |
MS.gene010457.t1 | AT4G27470 | 45.283 | 106 | 44 | 3 | 34 | 128 | 37 | 139 | 3.04e-26 | 102 |
MS.gene010457.t1 | AT4G03510 | 47.423 | 97 | 39 | 2 | 31 | 119 | 38 | 130 | 1.38e-25 | 100 |
MS.gene010457.t1 | AT4G03510 | 47.423 | 97 | 39 | 2 | 31 | 119 | 38 | 130 | 1.38e-25 | 100 |
MS.gene010457.t1 | AT4G03510 | 47.423 | 97 | 39 | 2 | 31 | 119 | 38 | 130 | 1.38e-25 | 100 |
MS.gene010457.t1 | AT4G03510 | 47.423 | 97 | 39 | 2 | 31 | 119 | 38 | 130 | 1.38e-25 | 100 |
MS.gene010457.t1 | AT4G28270 | 47.917 | 96 | 31 | 4 | 37 | 119 | 17 | 106 | 2.31e-24 | 96.3 |
MS.gene010457.t1 | AT3G58030 | 44.944 | 89 | 46 | 2 | 39 | 127 | 137 | 222 | 1.56e-23 | 98.6 |
MS.gene010457.t1 | AT3G58030 | 44.944 | 89 | 46 | 2 | 39 | 127 | 137 | 222 | 1.56e-23 | 98.6 |
MS.gene010457.t1 | AT3G58030 | 44.944 | 89 | 46 | 2 | 39 | 127 | 137 | 222 | 1.56e-23 | 98.6 |
MS.gene010457.t1 | AT3G58030 | 44.944 | 89 | 46 | 2 | 39 | 127 | 137 | 222 | 1.56e-23 | 98.6 |
MS.gene010457.t1 | AT2G42030 | 44.828 | 87 | 45 | 2 | 39 | 125 | 139 | 222 | 3.42e-23 | 97.4 |
MS.gene010457.t1 | AT2G44410 | 40.659 | 91 | 51 | 2 | 37 | 125 | 121 | 210 | 8.64e-19 | 84.7 |
Find 72 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCAGGATGCTACTGTTTA+TGG | 0.167323 | 5.2:-10881606 | MS.gene010457:CDS |
GAGAAATTGGTGCCTCTTTA+TGG | 0.188488 | 5.2:-10881876 | MS.gene010457:CDS |
ATTTGGGTTCAACGGGTTTC+AGG | 0.247980 | 5.2:-10881565 | MS.gene010457:CDS |
TTTGTTGGCCATGTCTTTAT+AGG | 0.254637 | 5.2:-10881959 | MS.gene010457:CDS |
ACAACTTCTGGTTATCCATT+TGG | 0.261632 | 5.2:-10881582 | MS.gene010457:CDS |
ACTGTTTATGGGACAACTTC+TGG | 0.273010 | 5.2:-10881594 | MS.gene010457:CDS |
CAACTTCTGGTTATCCATTT+GGG | 0.287027 | 5.2:-10881581 | MS.gene010457:CDS |
ACTTGTTCAGGAAGAGAAAT+TGG | 0.291213 | 5.2:-10881889 | MS.gene010457:CDS |
CTTATGAATATACACTTTCA+TGG | 0.293268 | 5.2:-10881630 | MS.gene010457:CDS |
TACTGCTGGGATTGGATTGA+TGG | 0.307850 | 5.2:-10881730 | MS.gene010457:CDS |
AGAGAAATGTCTCGACGTTT+TGG | 0.313707 | 5.2:-10882143 | None:intergenic |
AAGAATTTGCTTATGCTGAT+TGG | 0.345800 | 5.2:-10881474 | MS.gene010457:CDS |
GAGATTCCTCGCCGTCCTTC+CGG | 0.353413 | 5.2:-10881804 | MS.gene010457:CDS |
CCGATGGCTACTGCTAGATT+TGG | 0.354815 | 5.2:-10881696 | MS.gene010457:CDS |
TTCAGGATGCTACTGTTTAT+GGG | 0.361416 | 5.2:-10881605 | MS.gene010457:CDS |
CACGGTTTGCGGCCTCTGTC+CGG | 0.379672 | 5.2:+10881785 | None:intergenic |
TTGTTATGAGGTGGTGGATT+CGG | 0.380136 | 5.2:+10881762 | None:intergenic |
CCCGGATACGATTTAGTTCT+CGG | 0.381612 | 5.2:+10881831 | None:intergenic |
CCAAACCCATCATGTTCATC+AGG | 0.401623 | 5.2:-10882083 | MS.gene010457:CDS |
AAACAGGACATTCTTGTGAA+TGG | 0.407657 | 5.2:+10881919 | None:intergenic |
GGTTTCAATTCGCAAGCAAC+AGG | 0.415216 | 5.2:-10881528 | MS.gene010457:CDS |
TTTGGGTTCAACGGGTTTCA+GGG | 0.418547 | 5.2:-10881564 | MS.gene010457:CDS |
TGAACAAGTGCTTTACAAAC+AGG | 0.427996 | 5.2:+10881903 | None:intergenic |
CCTGATGAACATGATGGGTT+TGG | 0.431554 | 5.2:+10882083 | None:intergenic |
TCCGAGAACTAAATCGTATC+CGG | 0.438729 | 5.2:-10881832 | MS.gene010457:CDS |
TGTTTGTAAAGCACTTGTTC+AGG | 0.444996 | 5.2:-10881901 | MS.gene010457:CDS |
GGTGGATTCGGCACGGTTTG+CGG | 0.446057 | 5.2:+10881774 | None:intergenic |
AACAGGACATTCTTGTGAAT+GGG | 0.451065 | 5.2:+10881920 | None:intergenic |
GTTATCCATTTGGGTTCAAC+GGG | 0.454746 | 5.2:-10881572 | MS.gene010457:CDS |
TGAAACCCGTTGAACCCAAA+TGG | 0.458530 | 5.2:+10881567 | None:intergenic |
ACTGCTGGGATTGGATTGAT+GGG | 0.466877 | 5.2:-10881729 | MS.gene010457:CDS |
GGTTCAACGGGTTTCAGGGT+GGG | 0.474844 | 5.2:-10881560 | MS.gene010457:CDS |
GGTTATCCATTTGGGTTCAA+CGG | 0.476182 | 5.2:-10881573 | MS.gene010457:CDS |
AACTAAATCGTATCCGGGGA+TGG | 0.476536 | 5.2:-10881826 | MS.gene010457:CDS |
TGGATTTCTAGTCCTTCTTA+CGG | 0.485784 | 5.2:-10881454 | MS.gene010457:CDS |
CTCCCATTGTTATGAGGTGG+TGG | 0.489584 | 5.2:+10881756 | None:intergenic |
GATGAACATGATGGGTTTGG+TGG | 0.500767 | 5.2:+10882086 | None:intergenic |
ATCCACCACCTCATAACAAT+GGG | 0.503935 | 5.2:-10881758 | MS.gene010457:CDS |
GTTGGCCATGTCTTTATAGG+TGG | 0.509894 | 5.2:-10881956 | MS.gene010457:CDS |
TTGGTGCCTCTTTATGGTAG+AGG | 0.523573 | 5.2:-10881870 | MS.gene010457:CDS |
AACAGGACAAGTGCAACGGC+AGG | 0.523959 | 5.2:-10881511 | MS.gene010457:CDS |
TCAAAATCGCCGACATCACC+AGG | 0.524501 | 5.2:+10882041 | None:intergenic |
CCGAGAACTAAATCGTATCC+GGG | 0.524662 | 5.2:-10881831 | MS.gene010457:CDS |
GACATCACCAGGATCATTGT+TGG | 0.526868 | 5.2:+10882052 | None:intergenic |
GTAAAACTCCCATTGTTATG+AGG | 0.528292 | 5.2:+10881750 | None:intergenic |
AACAGTTCCAACAATGATCC+TGG | 0.528306 | 5.2:-10882059 | MS.gene010457:CDS |
GCGGCCTCTGTCCGGAAGGA+CGG | 0.532356 | 5.2:+10881793 | None:intergenic |
GATCCAGTGATCACACTTTG+TGG | 0.540983 | 5.2:-10881990 | MS.gene010457:CDS |
GCTGGGATTGGATTGATGGG+TGG | 0.551373 | 5.2:-10881726 | MS.gene010457:CDS |
GATGGGTGGATTTCTTCCGA+TGG | 0.553310 | 5.2:-10881712 | MS.gene010457:CDS |
AACAATGATCCTGGTGATGT+CGG | 0.558946 | 5.2:-10882050 | MS.gene010457:CDS |
AGTGTATATTCATAAGTGAC+GGG | 0.559818 | 5.2:+10881637 | None:intergenic |
TGACCACAAAGTGTGATCAC+TGG | 0.563476 | 5.2:+10881987 | None:intergenic |
TTTCAGGGTGGGAATGCGAG+AGG | 0.574157 | 5.2:-10881549 | MS.gene010457:CDS |
GTTTGCGGCCTCTGTCCGGA+AGG | 0.581142 | 5.2:+10881789 | None:intergenic |
CTGTTCCCTGATGAACATGA+TGG | 0.583916 | 5.2:+10882077 | None:intergenic |
AAGTGTATATTCATAAGTGA+CGG | 0.583974 | 5.2:+10881636 | None:intergenic |
GGGTTCAACGGGTTTCAGGG+TGG | 0.588862 | 5.2:-10881561 | MS.gene010457:CDS |
CGGCGAGGAATCTCCATCCC+CGG | 0.591217 | 5.2:+10881813 | None:intergenic |
CTCGCCGTCCTTCCGGACAG+AGG | 0.603395 | 5.2:-10881797 | MS.gene010457:CDS |
AATCCACCACCTCATAACAA+TGG | 0.610003 | 5.2:-10881759 | MS.gene010457:CDS |
ATGAGGTGGTGGATTCGGCA+CGG | 0.610340 | 5.2:+10881767 | None:intergenic |
AAGCAACAGGACAAGTGCAA+CGG | 0.621601 | 5.2:-10881515 | MS.gene010457:CDS |
CTCTGTCCGGAAGGACGGCG+AGG | 0.628222 | 5.2:+10881798 | None:intergenic |
AGGACAAGTGCAACGGCAGG+AGG | 0.631148 | 5.2:-10881508 | MS.gene010457:CDS |
AAACTCCCATTGTTATGAGG+TGG | 0.636988 | 5.2:+10881753 | None:intergenic |
CAAACCCATCATGTTCATCA+GGG | 0.650075 | 5.2:-10882082 | MS.gene010457:CDS |
CCAAATCTAGCAGTAGCCAT+CGG | 0.653472 | 5.2:+10881696 | None:intergenic |
TGGTAGAGGTAAAACGCAGA+CGG | 0.654255 | 5.2:-10881856 | MS.gene010457:CDS |
TGTTCCCTGATGAACATGAT+GGG | 0.680660 | 5.2:+10882078 | None:intergenic |
TGTAACCACCTATAAAGACA+TGG | 0.687496 | 5.2:+10881951 | None:intergenic |
CGAGAACTAAATCGTATCCG+GGG | 0.687817 | 5.2:-10881830 | MS.gene010457:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATGTAACATATGTTTTGATT+TGG | - | chr5.2:10881556-10881575 | MS.gene010457:CDS | 20.0% |
! | AAGTGTATATTCATAAGTGA+CGG | + | chr5.2:10881941-10881960 | None:intergenic | 25.0% |
! | CTTATGAATATACACTTTCA+TGG | - | chr5.2:10881944-10881963 | MS.gene010457:CDS | 25.0% |
! | TAAAAAAGATAACCGTAAGA+AGG | + | chr5.2:10882135-10882154 | None:intergenic | 25.0% |
!!! | TTTGTGGTCATTTATTTTGT+TGG | - | chr5.2:10881600-10881619 | MS.gene010457:CDS | 25.0% |
AGTGTATATTCATAAGTGAC+GGG | + | chr5.2:10881940-10881959 | None:intergenic | 30.0% | |
! | AAGAATTTGCTTATGCTGAT+TGG | - | chr5.2:10882100-10882119 | MS.gene010457:CDS | 30.0% |
! | TATACACTTTCATGGTTTTC+AGG | - | chr5.2:10881952-10881971 | MS.gene010457:CDS | 30.0% |
AAACAGGACATTCTTGTGAA+TGG | + | chr5.2:10881658-10881677 | None:intergenic | 35.0% | |
AACAGGACATTCTTGTGAAT+GGG | + | chr5.2:10881657-10881676 | None:intergenic | 35.0% | |
ACTTGTTCAGGAAGAGAAAT+TGG | - | chr5.2:10881685-10881704 | MS.gene010457:CDS | 35.0% | |
GTAAAACTCCCATTGTTATG+AGG | + | chr5.2:10881827-10881846 | None:intergenic | 35.0% | |
TGAACAAGTGCTTTACAAAC+AGG | + | chr5.2:10881674-10881693 | None:intergenic | 35.0% | |
TGTAACCACCTATAAAGACA+TGG | + | chr5.2:10881626-10881645 | None:intergenic | 35.0% | |
TTCAGGATGCTACTGTTTAT+GGG | - | chr5.2:10881969-10881988 | MS.gene010457:CDS | 35.0% | |
TTTCAGGATGCTACTGTTTA+TGG | - | chr5.2:10881968-10881987 | MS.gene010457:CDS | 35.0% | |
TTTGTTGGCCATGTCTTTAT+AGG | - | chr5.2:10881615-10881634 | MS.gene010457:CDS | 35.0% | |
! | ACAACTTCTGGTTATCCATT+TGG | - | chr5.2:10881992-10882011 | MS.gene010457:CDS | 35.0% |
! | CAACTTCTGGTTATCCATTT+GGG | - | chr5.2:10881993-10882012 | MS.gene010457:CDS | 35.0% |
! | GTTTTACCTCTACCATAAAG+AGG | + | chr5.2:10881713-10881732 | None:intergenic | 35.0% |
! | TGGAAACTTTTCGTTTTCGA+CGG | - | chr5.2:10881898-10881917 | MS.gene010457:CDS | 35.0% |
! | TGTTTGTAAAGCACTTGTTC+AGG | - | chr5.2:10881673-10881692 | MS.gene010457:CDS | 35.0% |
!! | TGGATTTCTAGTCCTTCTTA+CGG | - | chr5.2:10882120-10882139 | MS.gene010457:CDS | 35.0% |
!!! | CATATGTTTTGATTTGGCAC+AGG | - | chr5.2:10881562-10881581 | MS.gene010457:CDS | 35.0% |
AAACTCCCATTGTTATGAGG+TGG | + | chr5.2:10881824-10881843 | None:intergenic | 40.0% | |
AACAGTTCCAACAATGATCC+TGG | - | chr5.2:10881515-10881534 | MS.gene010457:CDS | 40.0% | |
AATCCACCACCTCATAACAA+TGG | - | chr5.2:10881815-10881834 | MS.gene010457:CDS | 40.0% | |
ACTGTTTATGGGACAACTTC+TGG | - | chr5.2:10881980-10881999 | MS.gene010457:CDS | 40.0% | |
ATCCACCACCTCATAACAAT+GGG | - | chr5.2:10881816-10881835 | MS.gene010457:CDS | 40.0% | |
CAAACCCATCATGTTCATCA+GGG | - | chr5.2:10881492-10881511 | MS.gene010457:CDS | 40.0% | |
TCCGAGAACTAAATCGTATC+CGG | - | chr5.2:10881742-10881761 | MS.gene010457:CDS | 40.0% | |
TGTTCCCTGATGAACATGAT+GGG | + | chr5.2:10881499-10881518 | None:intergenic | 40.0% | |
! | AACAATGATCCTGGTGATGT+CGG | - | chr5.2:10881524-10881543 | MS.gene010457:CDS | 40.0% |
! | AACAATGGGAGTTTTACTGC+TGG | - | chr5.2:10881830-10881849 | MS.gene010457:CDS | 40.0% |
! | ACAATGGGAGTTTTACTGCT+GGG | - | chr5.2:10881831-10881850 | MS.gene010457:CDS | 40.0% |
! | GAGAAATTGGTGCCTCTTTA+TGG | - | chr5.2:10881698-10881717 | MS.gene010457:CDS | 40.0% |
! | GGAAACTTTTCGTTTTCGAC+GGG | - | chr5.2:10881899-10881918 | MS.gene010457:CDS | 40.0% |
! | GGTTATCCATTTGGGTTCAA+CGG | - | chr5.2:10882001-10882020 | MS.gene010457:CDS | 40.0% |
! | GTTATCCATTTGGGTTCAAC+GGG | - | chr5.2:10882002-10882021 | MS.gene010457:CDS | 40.0% |
!! | TTGTTATGAGGTGGTGGATT+CGG | + | chr5.2:10881815-10881834 | None:intergenic | 40.0% |
!! | TTTTCGTTTTCGACGGGTTT+TGG | - | chr5.2:10881905-10881924 | MS.gene010457:CDS | 40.0% |
AACTAAATCGTATCCGGGGA+TGG | - | chr5.2:10881748-10881767 | MS.gene010457:CDS | 45.0% | |
AAGCAACAGGACAAGTGCAA+CGG | - | chr5.2:10882059-10882078 | MS.gene010457:CDS | 45.0% | |
ACTGCTGGGATTGGATTGAT+GGG | - | chr5.2:10881845-10881864 | MS.gene010457:CDS | 45.0% | |
CCAAACCCATCATGTTCATC+AGG | - | chr5.2:10881491-10881510 | MS.gene010457:CDS | 45.0% | |
CCAAATCTAGCAGTAGCCAT+CGG | + | chr5.2:10881881-10881900 | None:intergenic | 45.0% | |
CCGAGAACTAAATCGTATCC+GGG | - | chr5.2:10881743-10881762 | MS.gene010457:CDS | 45.0% | |
CGAGAACTAAATCGTATCCG+GGG | - | chr5.2:10881744-10881763 | MS.gene010457:CDS | 45.0% | |
CTGTTCCCTGATGAACATGA+TGG | + | chr5.2:10881500-10881519 | None:intergenic | 45.0% | |
GACATCACCAGGATCATTGT+TGG | + | chr5.2:10881525-10881544 | None:intergenic | 45.0% | |
GATCCAGTGATCACACTTTG+TGG | - | chr5.2:10881584-10881603 | MS.gene010457:CDS | 45.0% | |
GGTTTCAATTCGCAAGCAAC+AGG | - | chr5.2:10882046-10882065 | MS.gene010457:CDS | 45.0% | |
GTTGGCCATGTCTTTATAGG+TGG | - | chr5.2:10881618-10881637 | MS.gene010457:CDS | 45.0% | |
TACTGCTGGGATTGGATTGA+TGG | - | chr5.2:10881844-10881863 | MS.gene010457:CDS | 45.0% | |
TGAAACCCGTTGAACCCAAA+TGG | + | chr5.2:10882010-10882029 | None:intergenic | 45.0% | |
TGACCACAAAGTGTGATCAC+TGG | + | chr5.2:10881590-10881609 | None:intergenic | 45.0% | |
TGGTAGAGGTAAAACGCAGA+CGG | - | chr5.2:10881718-10881737 | MS.gene010457:CDS | 45.0% | |
! | ATTTGGGTTCAACGGGTTTC+AGG | - | chr5.2:10882009-10882028 | MS.gene010457:CDS | 45.0% |
! | TTGGTGCCTCTTTATGGTAG+AGG | - | chr5.2:10881704-10881723 | MS.gene010457:CDS | 45.0% |
! | TTTGGGTTCAACGGGTTTCA+GGG | - | chr5.2:10882010-10882029 | MS.gene010457:CDS | 45.0% |
!! | CCCGGATACGATTTAGTTCT+CGG | + | chr5.2:10881746-10881765 | None:intergenic | 45.0% |
!! | CCTGATGAACATGATGGGTT+TGG | + | chr5.2:10881494-10881513 | None:intergenic | 45.0% |
!! | GATGAACATGATGGGTTTGG+TGG | + | chr5.2:10881491-10881510 | None:intergenic | 45.0% |
!!! | TCTCGACGTTTTGGAGAATC+AGG | - | chr5.2:10881440-10881459 | MS.gene010457:CDS | 45.0% |
CCGATGGCTACTGCTAGATT+TGG | - | chr5.2:10881878-10881897 | MS.gene010457:CDS | 50.0% | |
CTCCCATTGTTATGAGGTGG+TGG | + | chr5.2:10881821-10881840 | None:intergenic | 50.0% | |
TCAAAATCGCCGACATCACC+AGG | + | chr5.2:10881536-10881555 | None:intergenic | 50.0% | |
! | GATGGGTGGATTTCTTCCGA+TGG | - | chr5.2:10881862-10881881 | MS.gene010457:CDS | 50.0% |
! | GGGAGTTTTACTGCTGGGAT+TGG | - | chr5.2:10881836-10881855 | MS.gene010457:CDS | 50.0% |
!! | CGTTTTCGACGGGTTTTGGT+GGG | - | chr5.2:10881909-10881928 | MS.gene010457:CDS | 50.0% |
!! | TCGTTTTCGACGGGTTTTGG+TGG | - | chr5.2:10881908-10881927 | MS.gene010457:CDS | 50.0% |
AACAGGACAAGTGCAACGGC+AGG | - | chr5.2:10882063-10882082 | MS.gene010457:CDS | 55.0% | |
GCTGGGATTGGATTGATGGG+TGG | - | chr5.2:10881848-10881867 | MS.gene010457:CDS | 55.0% | |
TTTCAGGGTGGGAATGCGAG+AGG | - | chr5.2:10882025-10882044 | MS.gene010457:CDS | 55.0% | |
! | GGTTCAACGGGTTTCAGGGT+GGG | - | chr5.2:10882014-10882033 | MS.gene010457:CDS | 55.0% |
!! | ATGAGGTGGTGGATTCGGCA+CGG | + | chr5.2:10881810-10881829 | None:intergenic | 55.0% |
AGGACAAGTGCAACGGCAGG+AGG | - | chr5.2:10882066-10882085 | MS.gene010457:CDS | 60.0% | |
GAGATTCCTCGCCGTCCTTC+CGG | - | chr5.2:10881770-10881789 | MS.gene010457:CDS | 60.0% | |
! | GGGTTCAACGGGTTTCAGGG+TGG | - | chr5.2:10882013-10882032 | MS.gene010457:CDS | 60.0% |
! | GGTGGATTCGGCACGGTTTG+CGG | + | chr5.2:10881803-10881822 | None:intergenic | 60.0% |
CACGGTTTGCGGCCTCTGTC+CGG | + | chr5.2:10881792-10881811 | None:intergenic | 65.0% | |
CGGCGAGGAATCTCCATCCC+CGG | + | chr5.2:10881764-10881783 | None:intergenic | 65.0% | |
GTTTGCGGCCTCTGTCCGGA+AGG | + | chr5.2:10881788-10881807 | None:intergenic | 65.0% | |
CTCGCCGTCCTTCCGGACAG+AGG | - | chr5.2:10881777-10881796 | MS.gene010457:CDS | 70.0% | |
CTCTGTCCGGAAGGACGGCG+AGG | + | chr5.2:10881779-10881798 | None:intergenic | 70.0% | |
GCGGCCTCTGTCCGGAAGGA+CGG | + | chr5.2:10881784-10881803 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 10881437 | 10882159 | 10881437 | ID=MS.gene010457 |
chr5.2 | mRNA | 10881437 | 10882159 | 10881437 | ID=MS.gene010457.t1;Parent=MS.gene010457 |
chr5.2 | exon | 10881437 | 10882159 | 10881437 | ID=MS.gene010457.t1.exon1;Parent=MS.gene010457.t1 |
chr5.2 | CDS | 10881437 | 10882159 | 10881437 | ID=cds.MS.gene010457.t1;Parent=MS.gene010457.t1 |
Gene Sequence |
Protein sequence |