Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011744.t1 | XP_003608463.1 | 97 | 297 | 9 | 0 | 1 | 297 | 1 | 297 | 3.90E-166 | 594 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011744.t1 | Q8VZJ7 | 67.5 | 292 | 89 | 2 | 6 | 295 | 1 | 288 | 7.6e-110 | 398.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011744.t1 | G7JCT5 | 97.0 | 297 | 9 | 0 | 1 | 297 | 1 | 297 | 2.8e-166 | 594.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011744 | MS.gene56734 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011744.t1 | MTR_4g095370 | 96.970 | 297 | 9 | 0 | 1 | 297 | 1 | 297 | 0.0 | 602 |
| MS.gene011744.t1 | MTR_4g095370 | 96.618 | 207 | 7 | 0 | 1 | 207 | 1 | 207 | 1.13e-148 | 415 |
| MS.gene011744.t1 | MTR_4g095370 | 96.602 | 206 | 7 | 0 | 1 | 206 | 1 | 206 | 2.72e-148 | 415 |
| MS.gene011744.t1 | MTR_5g016090 | 73.702 | 289 | 74 | 2 | 1 | 289 | 1 | 287 | 1.68e-145 | 410 |
| MS.gene011744.t1 | MTR_8g074810 | 46.154 | 208 | 105 | 4 | 86 | 289 | 68 | 272 | 5.65e-62 | 197 |
| MS.gene011744.t1 | MTR_5g022960 | 47.368 | 209 | 101 | 6 | 86 | 289 | 79 | 283 | 1.97e-60 | 194 |
| MS.gene011744.t1 | MTR_5g016090 | 65.698 | 172 | 57 | 2 | 1 | 172 | 1 | 170 | 4.70e-60 | 191 |
| MS.gene011744.t1 | MTR_8g074890 | 45.192 | 208 | 107 | 4 | 86 | 289 | 67 | 271 | 1.25e-59 | 191 |
| MS.gene011744.t1 | MTR_8g074880 | 43.269 | 208 | 111 | 4 | 86 | 289 | 116 | 320 | 6.78e-56 | 184 |
| MS.gene011744.t1 | MTR_8g074830 | 41.935 | 217 | 119 | 4 | 77 | 289 | 62 | 275 | 9.68e-55 | 179 |
| MS.gene011744.t1 | MTR_3g114670 | 44.762 | 210 | 105 | 7 | 86 | 289 | 70 | 274 | 6.27e-54 | 177 |
| MS.gene011744.t1 | MTR_8g074870 | 43.269 | 208 | 97 | 6 | 86 | 289 | 29 | 219 | 1.39e-51 | 169 |
| MS.gene011744.t1 | MTR_2g020800 | 44.248 | 226 | 113 | 7 | 73 | 289 | 26 | 247 | 5.40e-51 | 170 |
| MS.gene011744.t1 | MTR_2g020800 | 43.421 | 228 | 114 | 7 | 73 | 289 | 26 | 249 | 1.05e-50 | 169 |
| MS.gene011744.t1 | MTR_6g009440 | 39.744 | 234 | 131 | 6 | 68 | 295 | 32 | 261 | 3.60e-49 | 166 |
| MS.gene011744.t1 | MTR_4g118560 | 43.269 | 208 | 109 | 5 | 88 | 289 | 40 | 244 | 3.98e-48 | 162 |
| MS.gene011744.t1 | MTR_3g114610 | 42.308 | 208 | 106 | 7 | 86 | 288 | 97 | 295 | 1.70e-45 | 156 |
| MS.gene011744.t1 | MTR_1g116810 | 41.748 | 206 | 115 | 4 | 86 | 290 | 76 | 277 | 8.55e-44 | 151 |
| MS.gene011744.t1 | MTR_3g114590 | 40.952 | 210 | 107 | 5 | 86 | 289 | 65 | 263 | 4.43e-43 | 155 |
| MS.gene011744.t1 | MTR_3g114590 | 38.743 | 191 | 95 | 8 | 100 | 289 | 291 | 460 | 1.65e-28 | 115 |
| MS.gene011744.t1 | MTR_5g022960 | 41.085 | 129 | 71 | 4 | 86 | 213 | 79 | 203 | 1.70e-26 | 103 |
| MS.gene011744.t1 | MTR_3g051200 | 36.364 | 143 | 74 | 6 | 87 | 225 | 17 | 146 | 6.67e-20 | 84.7 |
| MS.gene011744.t1 | MTR_6g053720 | 22.180 | 266 | 175 | 8 | 30 | 291 | 6 | 243 | 1.39e-16 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011744.t1 | AT4G33910 | 67.466 | 292 | 89 | 2 | 6 | 295 | 1 | 288 | 2.66e-143 | 405 |
| MS.gene011744.t1 | AT2G23096 | 56.631 | 279 | 105 | 4 | 14 | 290 | 6 | 270 | 4.13e-110 | 320 |
| MS.gene011744.t1 | AT5G66060 | 38.078 | 281 | 158 | 8 | 14 | 289 | 14 | 283 | 2.37e-58 | 189 |
| MS.gene011744.t1 | AT1G20270 | 45.455 | 209 | 105 | 6 | 86 | 289 | 77 | 281 | 1.14e-56 | 184 |
| MS.gene011744.t1 | AT4G35810 | 43.602 | 211 | 108 | 7 | 85 | 289 | 80 | 285 | 2.21e-53 | 176 |
| MS.gene011744.t1 | AT4G35810 | 43.602 | 211 | 108 | 7 | 85 | 289 | 80 | 285 | 2.21e-53 | 176 |
| MS.gene011744.t1 | AT2G17720 | 41.429 | 210 | 108 | 6 | 86 | 287 | 81 | 283 | 3.00e-51 | 171 |
| MS.gene011744.t1 | AT3G28480 | 41.778 | 225 | 116 | 6 | 71 | 289 | 45 | 260 | 1.12e-50 | 170 |
| MS.gene011744.t1 | AT3G28490 | 41.463 | 205 | 115 | 2 | 88 | 289 | 35 | 237 | 3.63e-49 | 165 |
| MS.gene011744.t1 | AT5G18900 | 44.231 | 208 | 107 | 5 | 88 | 289 | 40 | 244 | 2.03e-48 | 163 |
| MS.gene011744.t1 | AT3G06300 | 41.148 | 209 | 112 | 5 | 88 | 289 | 41 | 245 | 1.46e-46 | 159 |
| MS.gene011744.t1 | AT3G28480 | 39.301 | 229 | 124 | 6 | 71 | 289 | 45 | 268 | 1.04e-44 | 154 |
| MS.gene011744.t1 | AT2G43080 | 33.452 | 281 | 173 | 7 | 17 | 290 | 6 | 279 | 2.05e-44 | 152 |
| MS.gene011744.t1 | AT4G35820 | 35.204 | 196 | 98 | 5 | 85 | 272 | 88 | 262 | 8.72e-34 | 124 |
| MS.gene011744.t1 | AT5G66060 | 34.404 | 218 | 129 | 7 | 14 | 230 | 14 | 218 | 1.50e-33 | 123 |
| MS.gene011744.t1 | AT1G20270 | 40.310 | 129 | 72 | 4 | 86 | 213 | 77 | 201 | 1.10e-25 | 101 |
| MS.gene011744.t1 | AT1G20270 | 40.310 | 129 | 72 | 4 | 86 | 213 | 77 | 201 | 1.10e-25 | 101 |
| MS.gene011744.t1 | AT4G25600 | 26.296 | 270 | 151 | 9 | 28 | 288 | 7 | 237 | 3.33e-18 | 83.2 |
| MS.gene011744.t1 | AT4G25600 | 26.442 | 208 | 114 | 6 | 88 | 288 | 1 | 176 | 1.87e-15 | 74.3 |
| MS.gene011744.t1 | AT4G25600 | 26.601 | 203 | 110 | 6 | 93 | 288 | 3 | 173 | 6.81e-15 | 72.8 |
| MS.gene011744.t1 | AT4G25600 | 26.601 | 203 | 110 | 6 | 93 | 288 | 15 | 185 | 7.41e-15 | 72.8 |
Find 70 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCCGCAGTTGCAAAATT+TGG | 0.149588 | 8.2:+24681658 | None:intergenic |
| GGTGTGTTTATTAGTGCTTC+TGG | 0.184028 | 8.2:-24681108 | MS.gene011744:CDS |
| TGCATCTTCTTCTTCCTTGC+TGG | 0.220163 | 8.2:-24682983 | MS.gene011744:CDS |
| GCATTCAATCCTGACGAATA+TGG | 0.227123 | 8.2:-24679271 | MS.gene011744:CDS |
| GGGAGCTGCCCTGTGATAAA+AGG | 0.274529 | 8.2:-24677802 | MS.gene011744:CDS |
| GTGTGTTTATTAGTGCTTCT+GGG | 0.312043 | 8.2:-24681107 | MS.gene011744:CDS |
| AAACAGTTAAATCATCAAAT+TGG | 0.319443 | 8.2:-24683051 | MS.gene011744:CDS |
| TTACAGGATGGTGATGGATA+TGG | 0.322042 | 8.2:-24682697 | MS.gene011744:intron |
| TTCTTCCTTGCTGGTTTCTT+CGG | 0.326739 | 8.2:-24682974 | MS.gene011744:CDS |
| CGAGACTATGTTTCCATTTG+AGG | 0.336255 | 8.2:-24678836 | MS.gene011744:intron |
| ACCTGATCGATTGTCCCGTT+GGG | 0.343227 | 8.2:+24678014 | None:intergenic |
| AAACTTGATATTACCTCAAA+TGG | 0.356088 | 8.2:+24678823 | None:intergenic |
| TTGATGACTGCTGGAGAGTT+TGG | 0.381177 | 8.2:-24682622 | MS.gene011744:CDS |
| GAATCAAGCAGCCTCGTTCT+CGG | 0.417673 | 8.2:+24682667 | None:intergenic |
| ACAAAACCACGCACCTGAAA+AGG | 0.434398 | 8.2:+24682577 | None:intergenic |
| CATTCAATCCTGACGAATAT+GGG | 0.435240 | 8.2:-24679270 | MS.gene011744:CDS |
| TTTATTCACTGCTCCCCAAC+GGG | 0.436604 | 8.2:-24678028 | MS.gene011744:CDS |
| ATCATCATTGGCTTTGCGTA+AGG | 0.443535 | 8.2:-24681593 | MS.gene011744:CDS |
| GGATAAAACAAAGACTTTAG+AGG | 0.450663 | 8.2:-24681085 | MS.gene011744:CDS |
| AACCTGATCGATTGTCCCGT+TGG | 0.452449 | 8.2:+24678013 | None:intergenic |
| GGAGCTGCCCTGTGATAAAA+GGG | 0.471964 | 8.2:-24677801 | MS.gene011744:CDS |
| GGGTGGCAACGAAGTGGATA+AGG | 0.477793 | 8.2:-24677771 | MS.gene011744:CDS |
| CTGAAAAGGAATCGATGTAA+TGG | 0.477889 | 8.2:+24682591 | None:intergenic |
| AAGTATAATTTGATGACTGC+TGG | 0.482044 | 8.2:-24682631 | MS.gene011744:CDS |
| ATACCTTGTTCTAATTCCCT+TGG | 0.486870 | 8.2:+24681552 | None:intergenic |
| CGAGAGCAACAATGATTCCT+AGG | 0.487275 | 8.2:-24681044 | MS.gene011744:CDS |
| GTTACCTCTCCATGACTCCT+AGG | 0.490526 | 8.2:+24681027 | None:intergenic |
| TTACGCAAAGCCAATGATGA+TGG | 0.495399 | 8.2:+24681595 | None:intergenic |
| GGAAGAAGAAGATGCATATG+AGG | 0.496237 | 8.2:+24682990 | None:intergenic |
| CCCCAACGGGACAATCGATC+AGG | 0.497692 | 8.2:-24678015 | MS.gene011744:intron |
| AGGACTCAAACCATCATCAT+TGG | 0.500450 | 8.2:-24681605 | MS.gene011744:CDS |
| TTTAAGAGTAAAGCCAAGAC+AGG | 0.509971 | 8.2:-24678066 | MS.gene011744:CDS |
| CTTTGGCAGACATCACTGCA+TGG | 0.513574 | 8.2:-24677823 | MS.gene011744:intron |
| AATATCCTACGCTATGAAGT+TGG | 0.515554 | 8.2:-24679319 | MS.gene011744:CDS |
| ATAGTTTCTGTGGCAAAGGC+AGG | 0.519985 | 8.2:-24681625 | MS.gene011744:CDS |
| TTTGGCAGACATCACTGCAT+GGG | 0.545810 | 8.2:-24677822 | MS.gene011744:intron |
| AAAGACTTTAGAGGCCATTG+AGG | 0.549241 | 8.2:-24681076 | MS.gene011744:CDS |
| ACAATGATTCCTAGGAGTCA+TGG | 0.552565 | 8.2:-24681036 | MS.gene011744:CDS |
| TCATCATTGGCTTTGCGTAA+GGG | 0.554646 | 8.2:-24681592 | MS.gene011744:CDS |
| ATGCATATGAGGAAAACGTA+AGG | 0.561296 | 8.2:+24683001 | None:intergenic |
| TCGAACATGGATGGTAGCTA+TGG | 0.566649 | 8.2:-24678107 | MS.gene011744:CDS |
| TGTGTTTATTAGTGCTTCTG+GGG | 0.569933 | 8.2:-24681106 | MS.gene011744:CDS |
| CAGAATGGCTCGAACATGGA+TGG | 0.572427 | 8.2:-24678116 | MS.gene011744:CDS |
| AAACATAGTTTCTGTGGCAA+AGG | 0.573162 | 8.2:-24681629 | MS.gene011744:CDS |
| AGAAGTGGGTGGCAACGAAG+TGG | 0.582684 | 8.2:-24677777 | MS.gene011744:CDS |
| TCTGCAGAATGGCTCGAACA+TGG | 0.586068 | 8.2:-24678120 | MS.gene011744:intron |
| ATGTGAAAACATAGTTTCTG+TGG | 0.587060 | 8.2:-24681635 | MS.gene011744:CDS |
| TTTGACCAACTTCATAGCGT+AGG | 0.588000 | 8.2:+24679314 | None:intergenic |
| TATGGCTACGAAGACTGCGT+TGG | 0.590047 | 8.2:-24678089 | MS.gene011744:CDS |
| TTTGGAAAATACAGAGCTCG+TGG | 0.594018 | 8.2:+24681676 | None:intergenic |
| TATTTAACTGATGTTGAGGA+AGG | 0.597718 | 8.2:-24678862 | MS.gene011744:CDS |
| CTGTGATAAAAGGGGAGAAG+TGG | 0.600279 | 8.2:-24677792 | MS.gene011744:CDS |
| TTAACTGATGTTGAGGAAGG+CGG | 0.603232 | 8.2:-24678859 | MS.gene011744:CDS |
| AAGGAATCTAGATCAAGAAG+AGG | 0.613538 | 8.2:-24677752 | MS.gene011744:CDS |
| TTAAGAGTAAAGCCAAGACA+GGG | 0.614135 | 8.2:-24678065 | MS.gene011744:CDS |
| TGTGATAAAAGGGGAGAAGT+GGG | 0.616405 | 8.2:-24677791 | MS.gene011744:CDS |
| CCTGATCGATTGTCCCGTTG+GGG | 0.617977 | 8.2:+24678015 | None:intergenic |
| TGCATATGAGGAAAACGTAA+GGG | 0.619030 | 8.2:+24683002 | None:intergenic |
| ATGAACCGAAGAAACCAGCA+AGG | 0.650368 | 8.2:+24682969 | None:intergenic |
| ATGGATTGAGACCGAGAACG+AGG | 0.662269 | 8.2:-24682678 | MS.gene011744:CDS |
| GCTGTATTTAACTGATGTTG+AGG | 0.662285 | 8.2:-24678866 | MS.gene011744:CDS |
| AAGAGTAAAGCCAAGACAGG+GGG | 0.667124 | 8.2:-24678063 | MS.gene011744:CDS |
| AGAAACTGCAGAGAATACCA+AGG | 0.667852 | 8.2:-24681569 | MS.gene011744:CDS |
| ATACCAAGGGAATTAGAACA+AGG | 0.674307 | 8.2:-24681555 | MS.gene011744:intron |
| GATAAAAGGGGAGAAGTGGG+TGG | 0.678514 | 8.2:-24677788 | MS.gene011744:CDS |
| GATTCCTAGGAGTCATGGAG+AGG | 0.681493 | 8.2:-24681031 | MS.gene011744:intron |
| GAAACTGCAGAGAATACCAA+GGG | 0.684668 | 8.2:-24681568 | MS.gene011744:CDS |
| GAGGCTGCTTGATTCGACGA+AGG | 0.692164 | 8.2:-24682659 | MS.gene011744:CDS |
| TAAGAGTAAAGCCAAGACAG+GGG | 0.719014 | 8.2:-24678064 | MS.gene011744:CDS |
| GAGCTGCCCTGTGATAAAAG+GGG | 0.732119 | 8.2:-24677800 | MS.gene011744:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAATACACTAATAA+TGG | + | chr8.2:24682234-24682253 | None:intergenic | 10.0% |
| !!! | TTTAGTTTTAAAATTTTCTT+AGG | + | chr8.2:24680035-24680054 | None:intergenic | 10.0% |
| !!! | TTTTTGTAAATTGTAATATA+TGG | - | chr8.2:24682481-24682500 | MS.gene011744:intron | 10.0% |
| !! | AACAAACAAATATTATTGTA+AGG | + | chr8.2:24680249-24680268 | None:intergenic | 15.0% |
| !! | TATTAATGAGATTACAAAAA+GGG | + | chr8.2:24681085-24681104 | None:intergenic | 15.0% |
| !! | TTATTATACTTAAAAGTTGT+TGG | - | chr8.2:24681769-24681788 | MS.gene011744:intron | 15.0% |
| !!! | AACTATTGAATTTGAAATAT+AGG | - | chr8.2:24681347-24681366 | MS.gene011744:intron | 15.0% |
| !!! | ATAACTATTTTTAAACTTTC+AGG | - | chr8.2:24678844-24678863 | MS.gene011744:CDS | 15.0% |
| !!! | CAAAAGAATATTTCTATATT+TGG | - | chr8.2:24678885-24678904 | MS.gene011744:intron | 15.0% |
| !! | AAACAGTTAAATCATCAAAT+TGG | - | chr8.2:24677754-24677773 | MS.gene011744:CDS | 20.0% |
| !! | AAAGTTAGAATTGCTAAATA+TGG | + | chr8.2:24678406-24678425 | None:intergenic | 20.0% |
| !! | AAGTATTTAGTACAATAGAA+AGG | - | chr8.2:24680681-24680700 | MS.gene011744:intron | 20.0% |
| !! | ACGATTATTTGTAATTAAGA+TGG | - | chr8.2:24681632-24681651 | MS.gene011744:CDS | 20.0% |
| !! | CTATTAATGAGATTACAAAA+AGG | + | chr8.2:24681086-24681105 | None:intergenic | 20.0% |
| !! | GAAAAATGTTATAGTTTACA+TGG | - | chr8.2:24682382-24682401 | MS.gene011744:intron | 20.0% |
| !!! | AAATTTGTGTTAGCATTTTT+AGG | - | chr8.2:24682571-24682590 | MS.gene011744:intron | 20.0% |
| !!! | AAGACTTTAATTTTAGCTAA+TGG | - | chr8.2:24680187-24680206 | MS.gene011744:intron | 20.0% |
| !!! | ACTAAATTATTGGATTAGAT+TGG | - | chr8.2:24682271-24682290 | MS.gene011744:intron | 20.0% |
| !!! | AGAAAAAGTGTAAGTATTTA+AGG | + | chr8.2:24680148-24680167 | None:intergenic | 20.0% |
| !!! | ATATTTCTATATTTGGTTCT+TGG | - | chr8.2:24678892-24678911 | MS.gene011744:intron | 20.0% |
| !!! | ATATTTTAAGTAGAATAGCT+AGG | - | chr8.2:24682413-24682432 | MS.gene011744:intron | 20.0% |
| !!! | ATTTTGATGTGAATGAAATT+CGG | - | chr8.2:24678740-24678759 | MS.gene011744:intron | 20.0% |
| !!! | GAAAATGTGTTTTTTTTGTT+TGG | + | chr8.2:24678652-24678671 | None:intergenic | 20.0% |
| !!! | GAAATTTGGAGTTTTTTATT+TGG | - | chr8.2:24678596-24678615 | MS.gene011744:intron | 20.0% |
| !!! | GATGTAAATAATGTTTTGAT+AGG | - | chr8.2:24682208-24682227 | MS.gene011744:intron | 20.0% |
| !!! | TAATTATTGTTTTGGAGTTT+AGG | - | chr8.2:24678536-24678555 | MS.gene011744:intron | 20.0% |
| !!! | TATTTCTATATTTGGTTCTT+GGG | - | chr8.2:24678893-24678912 | MS.gene011744:intron | 20.0% |
| !!! | TCATGTTCTTTTAAACATAA+GGG | - | chr8.2:24681279-24681298 | MS.gene011744:intron | 20.0% |
| ! | AAACTTGATATTACCTCAAA+TGG | + | chr8.2:24681985-24682004 | None:intergenic | 25.0% |
| ! | AACTTGTATCATTATACTGT+AGG | - | chr8.2:24681812-24681831 | MS.gene011744:intron | 25.0% |
| ! | AATGTGAATTAGTGGAAATT+TGG | - | chr8.2:24678582-24678601 | MS.gene011744:intron | 25.0% |
| ! | ACTTAAGTATTTAGCTGAAT+AGG | - | chr8.2:24678365-24678384 | MS.gene011744:intron | 25.0% |
| ! | ACTTGTATCATTATACTGTA+GGG | - | chr8.2:24681813-24681832 | MS.gene011744:intron | 25.0% |
| ! | AGCAAATGCTACTAAATTAT+TGG | - | chr8.2:24682261-24682280 | MS.gene011744:intron | 25.0% |
| ! | AGTTTAAGCTTACAAAACAA+CGG | + | chr8.2:24681331-24681350 | None:intergenic | 25.0% |
| ! | CTCCAAAACAATAATTATAC+AGG | + | chr8.2:24678533-24678552 | None:intergenic | 25.0% |
| ! | GATCTTTAATCAATTAACAC+AGG | + | chr8.2:24678935-24678954 | None:intergenic | 25.0% |
| ! | TAATCCTTGTATATGTACAT+CGG | + | chr8.2:24682145-24682164 | None:intergenic | 25.0% |
| ! | TACTTAACAAGTGACTTAAA+AGG | + | chr8.2:24678795-24678814 | None:intergenic | 25.0% |
| ! | TAGAAGAAAAACAACACTAA+CGG | + | chr8.2:24682820-24682839 | None:intergenic | 25.0% |
| ! | TAGACTTTAATGTGAATTAG+TGG | - | chr8.2:24678574-24678593 | MS.gene011744:intron | 25.0% |
| ! | TAGGAACTAAAATGATAAAG+TGG | - | chr8.2:24680370-24680389 | MS.gene011744:intron | 25.0% |
| ! | TATCTCCAAAAAGATCTATT+TGG | + | chr8.2:24680347-24680366 | None:intergenic | 25.0% |
| ! | TGCATTTCTATCTATGATAA+AGG | - | chr8.2:24679905-24679924 | MS.gene011744:intron | 25.0% |
| !! | AAGAGATTATTTTCTATGCA+CGG | + | chr8.2:24680447-24680466 | None:intergenic | 25.0% |
| !! | AATGAGCGAAAATTTGAAAT+TGG | - | chr8.2:24679038-24679057 | MS.gene011744:intron | 25.0% |
| !! | AGCCTGTATAATTATTGTTT+TGG | - | chr8.2:24678528-24678547 | MS.gene011744:intron | 25.0% |
| !! | ATTTGTAATCCTCTCATTTT+TGG | - | chr8.2:24681419-24681438 | MS.gene011744:intron | 25.0% |
| !! | CATGTTCTTTTAAACATAAG+GGG | - | chr8.2:24681280-24681299 | MS.gene011744:intron | 25.0% |
| !! | GTCATGTTCTTTTAAACATA+AGG | - | chr8.2:24681278-24681297 | MS.gene011744:intron | 25.0% |
| !! | TAAAAGTACGATTTCCTTAA+AGG | + | chr8.2:24681205-24681224 | None:intergenic | 25.0% |
| !! | TGTAACATAATGACCATTTT+AGG | + | chr8.2:24679626-24679645 | None:intergenic | 25.0% |
| !! | TTCAATAATGTCATCAGTTT+TGG | + | chr8.2:24680608-24680627 | None:intergenic | 25.0% |
| !! | TTCTAGAGATAATATACTGT+TGG | - | chr8.2:24679424-24679443 | MS.gene011744:intron | 25.0% |
| !! | TTTCACCAAATAGATCTTTT+TGG | - | chr8.2:24680339-24680358 | MS.gene011744:intron | 25.0% |
| !!! | AGTTAACCATTTGATTTTGT+CGG | + | chr8.2:24679345-24679364 | None:intergenic | 25.0% |
| !!! | ATATGTTGTCTGTGTTTTTT+AGG | - | chr8.2:24679092-24679111 | MS.gene011744:intron | 25.0% |
| !!! | ATTGTTATGTTTTTACAGGA+TGG | - | chr8.2:24678096-24678115 | MS.gene011744:CDS | 25.0% |
| !!! | ATTTTTTTTTCTCTGACCAA+TGG | + | chr8.2:24682183-24682202 | None:intergenic | 25.0% |
| !!! | GATCTTTTTGGAGATATTTT+AGG | - | chr8.2:24680351-24680370 | MS.gene011744:intron | 25.0% |
| !!! | GATTTTTTGCTTGTATTGTA+TGG | + | chr8.2:24681841-24681860 | None:intergenic | 25.0% |
| !!! | TCTAGGCTAAAAGTATTATT+TGG | - | chr8.2:24681225-24681244 | MS.gene011744:intron | 25.0% |
| !!! | TTTGTAATCCTCTCATTTTT+GGG | - | chr8.2:24681420-24681439 | MS.gene011744:intron | 25.0% |
| AAAATATTATCCATCGACCT+GGG | - | chr8.2:24680052-24680071 | MS.gene011744:intron | 30.0% | |
| AAATCAATGAAATTGAGGAG+TGG | + | chr8.2:24682028-24682047 | None:intergenic | 30.0% | |
| AATCAATGAAATTGAGGAGT+GGG | + | chr8.2:24682027-24682046 | None:intergenic | 30.0% | |
| AATTAATTCTTCAGACCTTG+AGG | + | chr8.2:24680893-24680912 | None:intergenic | 30.0% | |
| ATGTGAAAACATAGTTTCTG+TGG | - | chr8.2:24679170-24679189 | MS.gene011744:intron | 30.0% | |
| GAAATTCGGAATTTGTCATT+AGG | - | chr8.2:24678754-24678773 | MS.gene011744:intron | 30.0% | |
| GATAATATACTGTTGGACTT+TGG | - | chr8.2:24679431-24679450 | MS.gene011744:intron | 30.0% | |
| GATATTAAATGCCTGAAACA+TGG | + | chr8.2:24681472-24681491 | None:intergenic | 30.0% | |
| GATTTCCTTAAAGGAAAACT+TGG | + | chr8.2:24681196-24681215 | None:intergenic | 30.0% | |
| GCAAGTTTATATAAAATGCG+AGG | - | chr8.2:24679466-24679485 | MS.gene011744:intron | 30.0% | |
| GGATAAAACAAAGACTTTAG+AGG | - | chr8.2:24679720-24679739 | MS.gene011744:intron | 30.0% | |
| GTGTTAAGCGTATATTCTAA+TGG | - | chr8.2:24678956-24678975 | MS.gene011744:intron | 30.0% | |
| TAAAAACCACATATATGACG+AGG | + | chr8.2:24682597-24682616 | None:intergenic | 30.0% | |
| TAAAATATTATCCATCGACC+TGG | - | chr8.2:24680051-24680070 | MS.gene011744:intron | 30.0% | |
| TATTTAACTGATGTTGAGGA+AGG | - | chr8.2:24681943-24681962 | MS.gene011744:intron | 30.0% | |
| TCCTTAATAAGCGACTTAAA+AGG | + | chr8.2:24678674-24678693 | None:intergenic | 30.0% | |
| TGAATCAACGATTATTACTC+AGG | + | chr8.2:24682847-24682866 | None:intergenic | 30.0% | |
| TGTTAGAGCTAAAAAAACAG+TGG | - | chr8.2:24680541-24680560 | MS.gene011744:intron | 30.0% | |
| TTAAGCGTATATTCTAATGG+AGG | - | chr8.2:24678959-24678978 | MS.gene011744:intron | 30.0% | |
| TTGTTTGGTAGATGACTTAA+AGG | + | chr8.2:24678637-24678656 | None:intergenic | 30.0% | |
| TTTCATAGGAAGTAACTCAT+GGG | - | chr8.2:24678071-24678090 | MS.gene011744:CDS | 30.0% | |
| ! | AAAATGCGAGGTATCATTAT+AGG | - | chr8.2:24679478-24679497 | MS.gene011744:intron | 30.0% |
| ! | AAGTATAATTTGATGACTGC+TGG | - | chr8.2:24678174-24678193 | MS.gene011744:intron | 30.0% |
| ! | AGGAAATCGTACTTTTATCT+AGG | - | chr8.2:24681208-24681227 | MS.gene011744:intron | 30.0% |
| ! | TATTGAACCAGAAACAGTTT+TGG | - | chr8.2:24680621-24680640 | MS.gene011744:intron | 30.0% |
| ! | TTTTCATCAATGTTCGAAAC+AGG | + | chr8.2:24682367-24682386 | None:intergenic | 30.0% |
| ! | TTTTCCAAATTTTGCAACTG+CGG | - | chr8.2:24679143-24679162 | MS.gene011744:intron | 30.0% |
| ! | TTTTCTCTGTGTAGCAAAAT+TGG | - | chr8.2:24679945-24679964 | MS.gene011744:intron | 30.0% |
| !! | AATTAGAACAAGGTATTGTG+TGG | - | chr8.2:24679260-24679279 | MS.gene011744:CDS | 30.0% |
| !! | ATTAGAACAAGGTATTGTGT+GGG | - | chr8.2:24679261-24679280 | MS.gene011744:CDS | 30.0% |
| !! | CAGAGAATTACTTTTCTTAG+AGG | - | chr8.2:24681017-24681036 | MS.gene011744:intron | 30.0% |
| !! | GGTGATTGTTATGTTTTTAC+AGG | - | chr8.2:24678092-24678111 | MS.gene011744:CDS | 30.0% |
| !! | GTTAACCATTTGATTTTGTC+GGG | + | chr8.2:24679344-24679363 | None:intergenic | 30.0% |
| !! | TCCTTTTAAGTCGCTTATTA+AGG | - | chr8.2:24678670-24678689 | MS.gene011744:intron | 30.0% |
| !! | TCTTTTGCTGAATGTTGTTT+TGG | - | chr8.2:24678268-24678287 | MS.gene011744:intron | 30.0% |
| !! | TTGTAATCCTCTCATTTTTG+GGG | - | chr8.2:24681421-24681440 | MS.gene011744:intron | 30.0% |
| !!! | ATTTTTTGCTTAAACAGCTC+TGG | - | chr8.2:24679676-24679695 | MS.gene011744:intron | 30.0% |
| !!! | GTTTTTTTAGCTCTAACACA+CGG | + | chr8.2:24680539-24680558 | None:intergenic | 30.0% |
| AAAATCACCCCAAAAATGAG+AGG | + | chr8.2:24681431-24681450 | None:intergenic | 35.0% | |
| AAAATGATAAAGTGGCATCG+TGG | - | chr8.2:24680378-24680397 | MS.gene011744:intron | 35.0% | |
| AAACATAGTTTCTGTGGCAA+AGG | - | chr8.2:24679176-24679195 | MS.gene011744:intron | 35.0% | |
| AAGGAATCTAGATCAAGAAG+AGG | - | chr8.2:24683053-24683072 | MS.gene011744:CDS | 35.0% | |
| AATATCCTACGCTATGAAGT+TGG | - | chr8.2:24681486-24681505 | MS.gene011744:intron | 35.0% | |
| ATACCAAGGGAATTAGAACA+AGG | - | chr8.2:24679250-24679269 | MS.gene011744:intron | 35.0% | |
| ATACCTTGTTCTAATTCCCT+TGG | + | chr8.2:24679256-24679275 | None:intergenic | 35.0% | |
| ATATACTGTTGGACTTTGGA+AGG | - | chr8.2:24679435-24679454 | MS.gene011744:intron | 35.0% | |
| ATGAAGCCCAAATACTCTTA+CGG | + | chr8.2:24682648-24682667 | None:intergenic | 35.0% | |
| ATGCATATGAGGAAAACGTA+AGG | + | chr8.2:24677807-24677826 | None:intergenic | 35.0% | |
| ATGTTAGCCAAAACTGTTTC+TGG | + | chr8.2:24680631-24680650 | None:intergenic | 35.0% | |
| CATTCAATCCTGACGAATAT+GGG | - | chr8.2:24681535-24681554 | MS.gene011744:intron | 35.0% | |
| CGCGACTCAACATAATATAA+TGG | + | chr8.2:24682917-24682936 | None:intergenic | 35.0% | |
| CTGAAAAGGAATCGATGTAA+TGG | + | chr8.2:24678217-24678236 | None:intergenic | 35.0% | |
| CTGAAGAATTACCATGTTTC+AGG | - | chr8.2:24681458-24681477 | MS.gene011744:intron | 35.0% | |
| GCAGGAAATCAATGAAATTG+AGG | + | chr8.2:24682033-24682052 | None:intergenic | 35.0% | |
| GCTGTATTTAACTGATGTTG+AGG | - | chr8.2:24681939-24681958 | MS.gene011744:intron | 35.0% | |
| GCTTCATGTAACGTTTCAAA+AGG | - | chr8.2:24680827-24680846 | MS.gene011744:intron | 35.0% | |
| GTGTGTTTATTAGTGCTTCT+GGG | - | chr8.2:24679698-24679717 | MS.gene011744:intron | 35.0% | |
| GTTTCATAGGAAGTAACTCA+TGG | - | chr8.2:24678070-24678089 | MS.gene011744:CDS | 35.0% | |
| TAACGGCTTGTGTGTATAAT+AGG | + | chr8.2:24680101-24680120 | None:intergenic | 35.0% | |
| TACTCCGATGTACATATACA+AGG | - | chr8.2:24682138-24682157 | MS.gene011744:intron | 35.0% | |
| TCTGACCAATGGCAAAATAT+TGG | + | chr8.2:24682172-24682191 | None:intergenic | 35.0% | |
| TGAACTGGACTATGTAAGAA+TGG | - | chr8.2:24679294-24679313 | MS.gene011744:CDS | 35.0% | |
| TGCATATGAGGAAAACGTAA+GGG | + | chr8.2:24677806-24677825 | None:intergenic | 35.0% | |
| TGTAAGTGCAAACTCAATTC+TGG | - | chr8.2:24682953-24682972 | MS.gene011744:CDS | 35.0% | |
| TGTGTTTATTAGTGCTTCTG+GGG | - | chr8.2:24679699-24679718 | MS.gene011744:intron | 35.0% | |
| TTAAGAGTAAAGCCAAGACA+GGG | - | chr8.2:24682740-24682759 | MS.gene011744:intron | 35.0% | |
| TTAAGCACATTAGATTGCCA+AGG | + | chr8.2:24679852-24679871 | None:intergenic | 35.0% | |
| TTTAAGAGTAAAGCCAAGAC+AGG | - | chr8.2:24682739-24682758 | MS.gene011744:intron | 35.0% | |
| ! | AATTCTGAAAAGCTCTAACC+AGG | + | chr8.2:24682322-24682341 | None:intergenic | 35.0% |
| ! | ATCCTCCAATATTTTGCCAT+TGG | - | chr8.2:24682164-24682183 | MS.gene011744:intron | 35.0% |
| ! | ATTTTAGGCAAGCTGTACAA+GGG | + | chr8.2:24679611-24679630 | None:intergenic | 35.0% |
| ! | GATTATTTTCTATGCACGGA+CGG | + | chr8.2:24680443-24680462 | None:intergenic | 35.0% |
| ! | GGTTTGCTTCAAATTAACTC+TGG | - | chr8.2:24678980-24678999 | MS.gene011744:intron | 35.0% |
| ! | TACTTTTCTTAGAGGAACTG+AGG | - | chr8.2:24681025-24681044 | MS.gene011744:intron | 35.0% |
| ! | TTTAGTTCACACATACCCTT+TGG | + | chr8.2:24681572-24681591 | None:intergenic | 35.0% |
| !! | AATGGTCTTATGCATCCTAT+TGG | - | chr8.2:24680205-24680224 | MS.gene011744:intron | 35.0% |
| !! | ATGGTCTTATGCATCCTATT+GGG | - | chr8.2:24680206-24680225 | MS.gene011744:intron | 35.0% |
| !! | ATGTTTTTACAGGATGGTGA+TGG | - | chr8.2:24678102-24678121 | MS.gene011744:CDS | 35.0% |
| !! | CGTCTTTTTGAGAATTGAGT+TGG | - | chr8.2:24680915-24680934 | MS.gene011744:intron | 35.0% |
| !! | CTCAATTCTGGTTCTTTCTT+TGG | - | chr8.2:24682965-24682984 | MS.gene011744:CDS | 35.0% |
| !! | GTTGTTGGCTTAGTTGAAAT+TGG | - | chr8.2:24678299-24678318 | MS.gene011744:intron | 35.0% |
| !!! | ACATACCCTTTGGCTTTTTT+GGG | + | chr8.2:24681562-24681581 | None:intergenic | 35.0% |
| !!! | AGAAACAGTTTTGGCTAACA+TGG | - | chr8.2:24680630-24680649 | MS.gene011744:intron | 35.0% |
| !!! | ATTTTGATTGAGAATGCAGG+TGG | - | chr8.2:24681906-24681925 | MS.gene011744:intron | 35.0% |
| !!! | CAGATTTTGATTGAGAATGC+AGG | - | chr8.2:24681903-24681922 | MS.gene011744:intron | 35.0% |
| !!! | CATTACATCGATTCCTTTTC+AGG | - | chr8.2:24678215-24678234 | MS.gene011744:intron | 35.0% |
| !!! | GTGTTTTTTAGGTTTTGAGC+TGG | - | chr8.2:24679103-24679122 | MS.gene011744:intron | 35.0% |
| !!! | GTTTTGGTTGTGAATGTTGT+TGG | - | chr8.2:24678284-24678303 | MS.gene011744:intron | 35.0% |
| AAATGCATCCTGTATGACCT+TGG | - | chr8.2:24679832-24679851 | MS.gene011744:intron | 40.0% | |
| AACTTTGTTAACCGCAACTG+AGG | - | chr8.2:24681377-24681396 | MS.gene011744:intron | 40.0% | |
| ACAATGATTCCTAGGAGTCA+TGG | - | chr8.2:24679769-24679788 | MS.gene011744:intron | 40.0% | |
| ACAGACCCGACAAAATCAAA+TGG | - | chr8.2:24679336-24679355 | MS.gene011744:intron | 40.0% | |
| AGAAACTGCAGAGAATACCA+AGG | - | chr8.2:24679236-24679255 | MS.gene011744:intron | 40.0% | |
| AGCTGAATCACCAACAGAAT+TGG | - | chr8.2:24680579-24680598 | MS.gene011744:intron | 40.0% | |
| AGGACTCAAACCATCATCAT+TGG | - | chr8.2:24679200-24679219 | MS.gene011744:intron | 40.0% | |
| AGTACCTCGTGTAATAAGTG+AGG | - | chr8.2:24680852-24680871 | MS.gene011744:intron | 40.0% | |
| ATTACAAAAAGGGAGAGCCT+AGG | + | chr8.2:24681075-24681094 | None:intergenic | 40.0% | |
| CAAAGCTGAGATGAGGAAAA+TGG | + | chr8.2:24680755-24680774 | None:intergenic | 40.0% | |
| CAACTTTGTTAGAGGAAGCA+GGG | - | chr8.2:24680938-24680957 | MS.gene011744:intron | 40.0% | |
| CACATACATGTGACATGTCT+TGG | + | chr8.2:24677975-24677994 | None:intergenic | 40.0% | |
| CACGAAATTGTTCTGCAGAA+TGG | - | chr8.2:24682674-24682693 | MS.gene011744:CDS | 40.0% | |
| CAGCATTCCATCATCTACAA+TGG | - | chr8.2:24681126-24681145 | MS.gene011744:intron | 40.0% | |
| CATCGAGAGACTACATGATA+GGG | - | chr8.2:24681695-24681714 | MS.gene011744:intron | 40.0% | |
| CGAGACTATGTTTCCATTTG+AGG | - | chr8.2:24681969-24681988 | MS.gene011744:intron | 40.0% | |
| CGAGCTCATTAACATGTGTT+TGG | + | chr8.2:24681871-24681890 | None:intergenic | 40.0% | |
| CTCTGTGTAGCAAAATTGGT+GGG | - | chr8.2:24679949-24679968 | MS.gene011744:intron | 40.0% | |
| CTGAATCACCAACAGAATTG+GGG | - | chr8.2:24680581-24680600 | MS.gene011744:intron | 40.0% | |
| CTGCAAAAAAATGACCCAAG+TGG | + | chr8.2:24681000-24681019 | None:intergenic | 40.0% | |
| CTTGTACAGCTTGCCTAAAA+TGG | - | chr8.2:24679610-24679629 | MS.gene011744:intron | 40.0% | |
| GAAACTGCAGAGAATACCAA+GGG | - | chr8.2:24679237-24679256 | MS.gene011744:intron | 40.0% | |
| GACCAATGGCAAAATATTGG+AGG | + | chr8.2:24682169-24682188 | None:intergenic | 40.0% | |
| GCATTCAATCCTGACGAATA+TGG | - | chr8.2:24681534-24681553 | MS.gene011744:intron | 40.0% | |
| GCTGAATCACCAACAGAATT+GGG | - | chr8.2:24680580-24680599 | MS.gene011744:intron | 40.0% | |
| GGAAGAAGAAGATGCATATG+AGG | + | chr8.2:24677818-24677837 | None:intergenic | 40.0% | |
| GGTGTGTTTATTAGTGCTTC+TGG | - | chr8.2:24679697-24679716 | MS.gene011744:intron | 40.0% | |
| GTCGTATCCATTGTAGATGA+TGG | + | chr8.2:24681136-24681155 | None:intergenic | 40.0% | |
| GTGGGTGAGTTATTATGAAC+TGG | - | chr8.2:24679279-24679298 | MS.gene011744:CDS | 40.0% | |
| GTTGCGGTTAACAAAGTTCA+AGG | + | chr8.2:24681375-24681394 | None:intergenic | 40.0% | |
| TAACAGGTGAAGAACGAAGT+AGG | + | chr8.2:24680514-24680533 | None:intergenic | 40.0% | |
| TAACATGGAGATTGTAAGGC+TGG | - | chr8.2:24680645-24680664 | MS.gene011744:intron | 40.0% | |
| TAAGAGTAAAGCCAAGACAG+GGG | - | chr8.2:24682741-24682760 | MS.gene011744:intron | 40.0% | |
| TATGTGACTTCGATCCCAAT+AGG | + | chr8.2:24680223-24680242 | None:intergenic | 40.0% | |
| TATTTGAACCTTAGACCTCC+TGG | - | chr8.2:24682301-24682320 | MS.gene011744:intron | 40.0% | |
| TCAGCAAAAGACTCGAATGT+TGG | + | chr8.2:24678259-24678278 | None:intergenic | 40.0% | |
| TCATCGAGAGACTACATGAT+AGG | - | chr8.2:24681694-24681713 | MS.gene011744:CDS | 40.0% | |
| TCTCTGTGTAGCAAAATTGG+TGG | - | chr8.2:24679948-24679967 | MS.gene011744:intron | 40.0% | |
| TGGCTAACATGGAGATTGTA+AGG | - | chr8.2:24680641-24680660 | MS.gene011744:intron | 40.0% | |
| TGTAAGAATGGTTAACTGCG+TGG | - | chr8.2:24679306-24679325 | MS.gene011744:CDS | 40.0% | |
| TGTGATAAAAGGGGAGAAGT+GGG | - | chr8.2:24683014-24683033 | MS.gene011744:CDS | 40.0% | |
| TGTTCCGCAGTTGCAAAATT+TGG | + | chr8.2:24679150-24679169 | None:intergenic | 40.0% | |
| TTAACTGATGTTGAGGAAGG+CGG | - | chr8.2:24681946-24681965 | MS.gene011744:intron | 40.0% | |
| TTACGCAAAGCCAATGATGA+TGG | + | chr8.2:24679213-24679232 | None:intergenic | 40.0% | |
| TTAGATTGCCAAGGTCATAC+AGG | + | chr8.2:24679843-24679862 | None:intergenic | 40.0% | |
| TTATACACACAAGCCGTTAC+TGG | - | chr8.2:24680102-24680121 | MS.gene011744:intron | 40.0% | |
| TTATAGTGCTCTAACTACGC+AGG | + | chr8.2:24682051-24682070 | None:intergenic | 40.0% | |
| TTTAGGCCTCGTCATATATG+TGG | - | chr8.2:24682588-24682607 | MS.gene011744:intron | 40.0% | |
| TTTCGCATAGCTACCAGTAA+CGG | + | chr8.2:24680118-24680137 | None:intergenic | 40.0% | |
| TTTGACCAACTTCATAGCGT+AGG | + | chr8.2:24681494-24681513 | None:intergenic | 40.0% | |
| TTTGGAAAATACAGAGCTCG+TGG | + | chr8.2:24679132-24679151 | None:intergenic | 40.0% | |
| ! | AAAGACTTTAGAGGCCATTG+AGG | - | chr8.2:24679729-24679748 | MS.gene011744:intron | 40.0% |
| ! | ACTGTTACGGAAGGAGTTTT+AGG | - | chr8.2:24681168-24681187 | MS.gene011744:intron | 40.0% |
| ! | ACTTCTCCCCTTTTATCACA+GGG | + | chr8.2:24683014-24683033 | None:intergenic | 40.0% |
| ! | AGGCACCAAGTTTTCCTTTA+AGG | - | chr8.2:24681188-24681207 | MS.gene011744:intron | 40.0% |
| ! | ATCATAAAGCACCTCAGTTG+CGG | + | chr8.2:24681391-24681410 | None:intergenic | 40.0% |
| ! | ATCTCTTTTCTCTCACTCTC+AGG | - | chr8.2:24677857-24677876 | MS.gene011744:intron | 40.0% |
| ! | CATACAGGATGCATTTTCTG+CGG | + | chr8.2:24679828-24679847 | None:intergenic | 40.0% |
| ! | CATTTTAGGCAAGCTGTACA+AGG | + | chr8.2:24679612-24679631 | None:intergenic | 40.0% |
| ! | TCTCGCAATTTTCTCCTCAA+TGG | + | chr8.2:24679746-24679765 | None:intergenic | 40.0% |
| ! | TGAGTTGGCAACTTTGTTAG+AGG | - | chr8.2:24680930-24680949 | MS.gene011744:intron | 40.0% |
| ! | TTTCCTCATCTCAGCTTTGA+GGG | - | chr8.2:24680756-24680775 | MS.gene011744:intron | 40.0% |
| ! | TTTTATTCACTGCTCCCCAA+CGG | - | chr8.2:24682776-24682795 | MS.gene011744:intron | 40.0% |
| ! | TTTTCCTCATCTCAGCTTTG+AGG | - | chr8.2:24680755-24680774 | MS.gene011744:intron | 40.0% |
| !! | ACTTCGCCGTAAGAGTATTT+GGG | - | chr8.2:24682639-24682658 | MS.gene011744:CDS | 40.0% |
| !! | ATCATCATTGGCTTTGCGTA+AGG | - | chr8.2:24679212-24679231 | MS.gene011744:intron | 40.0% |
| !! | ATTTGATTTTGTCGGGTCTG+TGG | + | chr8.2:24679337-24679356 | None:intergenic | 40.0% |
| !! | TACTTCGCCGTAAGAGTATT+TGG | - | chr8.2:24682638-24682657 | MS.gene011744:CDS | 40.0% |
| !! | TCATCATTGGCTTTGCGTAA+GGG | - | chr8.2:24679213-24679232 | MS.gene011744:intron | 40.0% |
| !! | TTACAGGATGGTGATGGATA+TGG | - | chr8.2:24678108-24678127 | MS.gene011744:CDS | 40.0% |
| !! | TTCTTCCTTGCTGGTTTCTT+CGG | - | chr8.2:24677831-24677850 | MS.gene011744:intron | 40.0% |
| !!! | CACATACCCTTTGGCTTTTT+TGG | + | chr8.2:24681563-24681582 | None:intergenic | 40.0% |
| !!! | CATACCCTTTGGCTTTTTTG+GGG | + | chr8.2:24681561-24681580 | None:intergenic | 40.0% |
| AACTCTGGCGAATGATGAAG+TGG | - | chr8.2:24678995-24679014 | MS.gene011744:intron | 45.0% | |
| AAGAGTAAAGCCAAGACAGG+GGG | - | chr8.2:24682742-24682761 | MS.gene011744:intron | 45.0% | |
| AATGTTCGAAACAGGCAGCT+CGG | + | chr8.2:24682359-24682378 | None:intergenic | 45.0% | |
| ACAAAACCACGCACCTGAAA+AGG | + | chr8.2:24678231-24678250 | None:intergenic | 45.0% | |
| ACCTCGTGTAATAAGTGAGG+TGG | - | chr8.2:24680855-24680874 | MS.gene011744:intron | 45.0% | |
| AGAGACTACATGATAGGGCT+TGG | - | chr8.2:24681700-24681719 | MS.gene011744:intron | 45.0% | |
| AGAGGAAGCAGGGTAGTTAT+TGG | - | chr8.2:24680948-24680967 | MS.gene011744:intron | 45.0% | |
| ATAGAAAGGCTTGACTGTCG+AGG | - | chr8.2:24680695-24680714 | MS.gene011744:intron | 45.0% | |
| ATAGTTTCTGTGGCAAAGGC+AGG | - | chr8.2:24679180-24679199 | MS.gene011744:intron | 45.0% | |
| ATGAACCGAAGAAACCAGCA+AGG | + | chr8.2:24677839-24677858 | None:intergenic | 45.0% | |
| CAATGGATACGACCCTTCTT+TGG | - | chr8.2:24681143-24681162 | MS.gene011744:intron | 45.0% | |
| CCCTTCTTTGGACACTGTTA+CGG | - | chr8.2:24681155-24681174 | MS.gene011744:intron | 45.0% | |
| CCGTAACAGTGTCCAAAGAA+GGG | + | chr8.2:24681158-24681177 | None:intergenic | 45.0% | |
| CGAGAGCAACAATGATTCCT+AGG | - | chr8.2:24679761-24679780 | MS.gene011744:intron | 45.0% | |
| CTGTGATAAAAGGGGAGAAG+TGG | - | chr8.2:24683013-24683032 | MS.gene011744:CDS | 45.0% | |
| GAGGAAGCAGGGTAGTTATT+GGG | - | chr8.2:24680949-24680968 | MS.gene011744:intron | 45.0% | |
| GCAACTTTGTTAGAGGAAGC+AGG | - | chr8.2:24680937-24680956 | MS.gene011744:intron | 45.0% | |
| GCATCGTGGTGTGATTTGAT+CGG | - | chr8.2:24680392-24680411 | MS.gene011744:intron | 45.0% | |
| GCTCTAACACACGGAATAAC+AGG | + | chr8.2:24680530-24680549 | None:intergenic | 45.0% | |
| GTTGGATTAAGTTCATGCCC+AGG | + | chr8.2:24680072-24680091 | None:intergenic | 45.0% | |
| TAAGATGGAGTATAGCGTCG+AGG | - | chr8.2:24681647-24681666 | MS.gene011744:CDS | 45.0% | |
| TAATGTGTCAGTGTCGTGTC+TGG | - | chr8.2:24678028-24678047 | MS.gene011744:CDS | 45.0% | |
| TACTCTTACGGCGAAGTATG+AGG | + | chr8.2:24682636-24682655 | None:intergenic | 45.0% | |
| TCCACCTCACTTATTACACG+AGG | + | chr8.2:24680859-24680878 | None:intergenic | 45.0% | |
| TCCGTAACAGTGTCCAAAGA+AGG | + | chr8.2:24681159-24681178 | None:intergenic | 45.0% | |
| TCGAACATGGATGGTAGCTA+TGG | - | chr8.2:24682698-24682717 | MS.gene011744:intron | 45.0% | |
| TCTTTGGACACTGTTACGGA+AGG | - | chr8.2:24681159-24681178 | MS.gene011744:intron | 45.0% | |
| TGCATCTTCTTCTTCCTTGC+TGG | - | chr8.2:24677822-24677841 | MS.gene011744:intron | 45.0% | |
| TGGATCAGATATCAGCCTCA+AGG | - | chr8.2:24680875-24680894 | MS.gene011744:intron | 45.0% | |
| TTGGGAGATGGAATTGAGTG+AGG | - | chr8.2:24680967-24680986 | MS.gene011744:intron | 45.0% | |
| TTTATTCACTGCTCCCCAAC+GGG | - | chr8.2:24682777-24682796 | MS.gene011744:intron | 45.0% | |
| TTTGGCAGACATCACTGCAT+GGG | - | chr8.2:24682983-24683002 | MS.gene011744:CDS | 45.0% | |
| ! | AAGATGGAGTATAGCGTCGA+GGG | - | chr8.2:24681648-24681667 | MS.gene011744:CDS | 45.0% |
| ! | AGTGAGGTATTCAGCCACTT+GGG | - | chr8.2:24680983-24681002 | MS.gene011744:intron | 45.0% |
| ! | ATGCATTTTCTGCGGAGAGA+GGG | + | chr8.2:24679820-24679839 | None:intergenic | 45.0% |
| ! | CACTTCTCCCCTTTTATCAC+AGG | + | chr8.2:24683015-24683034 | None:intergenic | 45.0% |
| ! | TCTGAAAAGCTCTAACCAGG+AGG | + | chr8.2:24682319-24682338 | None:intergenic | 45.0% |
| ! | TGTCTGTGTCGGTGTTTCAT+AGG | - | chr8.2:24678057-24678076 | MS.gene011744:CDS | 45.0% |
| ! | TTGATGACTGCTGGAGAGTT+TGG | - | chr8.2:24678183-24678202 | MS.gene011744:intron | 45.0% |
| !! | GTGTATAATAGGAGCGCTGT+TGG | + | chr8.2:24680090-24680109 | None:intergenic | 45.0% |
| !! | GTTTTGGTCCCCAATTCTGT+TGG | + | chr8.2:24680592-24680611 | None:intergenic | 45.0% |
| !! | GTATAATAATAAAAAAAAAA+TGG | + | chr8.2:24681758-24681777 | None:intergenic | 5.0% |
| AACCTGATCGATTGTCCCGT+TGG | + | chr8.2:24682795-24682814 | None:intergenic | 50.0% | |
| ACCTGATCGATTGTCCCGTT+GGG | + | chr8.2:24682794-24682813 | None:intergenic | 50.0% | |
| ACGGCGAAGTATGAGGATAC+AGG | + | chr8.2:24682629-24682648 | None:intergenic | 50.0% | |
| ACTCTACCACTTCCTACACC+TGG | + | chr8.2:24680795-24680814 | None:intergenic | 50.0% | |
| ATGGGCCCCAAAAAAGCCAA+AGG | - | chr8.2:24681553-24681572 | MS.gene011744:intron | 50.0% | |
| CAGAATGGCTCGAACATGGA+TGG | - | chr8.2:24682689-24682708 | MS.gene011744:CDS | 50.0% | |
| CAGGTGAAGAACGAAGTAGG+AGG | + | chr8.2:24680511-24680530 | None:intergenic | 50.0% | |
| CATGGAGATTGTAAGGCTGG+AGG | - | chr8.2:24680648-24680667 | MS.gene011744:intron | 50.0% | |
| CTTTGGCAGACATCACTGCA+TGG | - | chr8.2:24682982-24683001 | MS.gene011744:CDS | 50.0% | |
| GAATCAAGCAGCCTCGTTCT+CGG | + | chr8.2:24678141-24678160 | None:intergenic | 50.0% | |
| GAGCTGCCCTGTGATAAAAG+GGG | - | chr8.2:24683005-24683024 | MS.gene011744:CDS | 50.0% | |
| GATAAAAGGGGAGAAGTGGG+TGG | - | chr8.2:24683017-24683036 | MS.gene011744:CDS | 50.0% | |
| GATTCCTAGGAGTCATGGAG+AGG | - | chr8.2:24679774-24679793 | MS.gene011744:intron | 50.0% | |
| GCAGCTCGGTTGAAAAACTG+AGG | + | chr8.2:24682345-24682364 | None:intergenic | 50.0% | |
| GCAGGGTAGTTATTGGGAGA+TGG | - | chr8.2:24680955-24680974 | MS.gene011744:intron | 50.0% | |
| GGAGCTGCCCTGTGATAAAA+GGG | - | chr8.2:24683004-24683023 | MS.gene011744:CDS | 50.0% | |
| GTTACCTCTCCATGACTCCT+AGG | + | chr8.2:24679781-24679800 | None:intergenic | 50.0% | |
| TAAGTTCATGCCCAGGTCGA+TGG | + | chr8.2:24680065-24680084 | None:intergenic | 50.0% | |
| TATGGCTACGAAGACTGCGT+TGG | - | chr8.2:24682716-24682735 | MS.gene011744:intron | 50.0% | |
| TCTGCAGAATGGCTCGAACA+TGG | - | chr8.2:24682685-24682704 | MS.gene011744:CDS | 50.0% | |
| TCTGGTGTTCGTGTCTGTGT+CGG | - | chr8.2:24678046-24678065 | MS.gene011744:CDS | 50.0% | |
| TCTTAGAGGAACTGAGGCTC+TGG | - | chr8.2:24681031-24681050 | MS.gene011744:intron | 50.0% | |
| TGGGCCCCAAAAAAGCCAAA+GGG | - | chr8.2:24681554-24681573 | MS.gene011744:intron | 50.0% | |
| TGTGGCCATTGCAAAAGCCT+AGG | - | chr8.2:24681055-24681074 | MS.gene011744:CDS | 50.0% | |
| TTGCCCTCAAAGCTGAGATG+AGG | + | chr8.2:24680762-24680781 | None:intergenic | 50.0% | |
| ! | AGCTCTAACCAGGAGGTCTA+AGG | + | chr8.2:24682312-24682331 | None:intergenic | 50.0% |
| ! | ATGGATTGAGACCGAGAACG+AGG | - | chr8.2:24678127-24678146 | MS.gene011744:intron | 50.0% |
| ! | GACTGTCGAGGATGCTACTT+TGG | - | chr8.2:24680707-24680726 | MS.gene011744:intron | 50.0% |
| ! | GAGAGCCTAGGCTTTTGCAA+TGG | + | chr8.2:24681063-24681082 | None:intergenic | 50.0% |
| ! | GAGTGAGGTATTCAGCCACT+TGG | - | chr8.2:24680982-24681001 | MS.gene011744:intron | 50.0% |
| ! | GATGCATTTTCTGCGGAGAG+AGG | + | chr8.2:24679821-24679840 | None:intergenic | 50.0% |
| !! | TCATCTCAGCTTTGAGGGCA+AGG | - | chr8.2:24680761-24680780 | MS.gene011744:intron | 50.0% |
| !!! | TCGATTCCTTTTCAGGTGCG+TGG | - | chr8.2:24678222-24678241 | MS.gene011744:intron | 50.0% |
| !!! | TTTTGGGGCCCATATTCGTC+AGG | + | chr8.2:24681546-24681565 | None:intergenic | 50.0% |
| AGAAGTCCATCCCCCTGTCT+TGG | + | chr8.2:24682755-24682774 | None:intergenic | 55.0% | |
| AGAAGTGGGTGGCAACGAAG+TGG | - | chr8.2:24683028-24683047 | MS.gene011744:CDS | 55.0% | |
| CCTGATCGATTGTCCCGTTG+GGG | + | chr8.2:24682793-24682812 | None:intergenic | 55.0% | |
| GGGAGCTGCCCTGTGATAAA+AGG | - | chr8.2:24683003-24683022 | MS.gene011744:CDS | 55.0% | |
| GGGTGGCAACGAAGTGGATA+AGG | - | chr8.2:24683034-24683053 | MS.gene011744:CDS | 55.0% | |
| GGTCTTCCAGGTGTAGGAAG+TGG | - | chr8.2:24680786-24680805 | MS.gene011744:intron | 55.0% | |
| GTAAAGCCAAGACAGGGGGA+TGG | - | chr8.2:24682746-24682765 | MS.gene011744:intron | 55.0% | |
| ! | AGGAACTGAGGCTCTGGTTG+TGG | - | chr8.2:24681037-24681056 | MS.gene011744:CDS | 55.0% |
| ! | GAGGCTGCTTGATTCGACGA+AGG | - | chr8.2:24678146-24678165 | MS.gene011744:intron | 55.0% |
| !! | AAGGCTGGTCTTCCAGGTGT+AGG | - | chr8.2:24680780-24680799 | MS.gene011744:intron | 55.0% |
| CCCCAACGGGACAATCGATC+AGG | - | chr8.2:24682790-24682809 | MS.gene011744:intron | 60.0% | |
| GGAGAGAGGGCGAGCTGAAA+AGG | + | chr8.2:24679807-24679826 | None:intergenic | 60.0% | |
| !! | CTCAGCTTTGAGGGCAAGGC+TGG | - | chr8.2:24680765-24680784 | MS.gene011744:intron | 60.0% |
| !! | GAGGGCAAGGCTGGTCTTCC+AGG | - | chr8.2:24680774-24680793 | MS.gene011744:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 24677744 | 24683083 | 24677744 | ID=MS.gene011744 |
| chr8.2 | mRNA | 24677744 | 24683083 | 24677744 | ID=MS.gene011744.t1;Parent=MS.gene011744 |
| chr8.2 | exon | 24682949 | 24683083 | 24682949 | ID=MS.gene011744.t1.exon1;Parent=MS.gene011744.t1 |
| chr8.2 | CDS | 24682949 | 24683083 | 24682949 | ID=cds.MS.gene011744.t1;Parent=MS.gene011744.t1 |
| chr8.2 | exon | 24682591 | 24682713 | 24682591 | ID=MS.gene011744.t1.exon2;Parent=MS.gene011744.t1 |
| chr8.2 | CDS | 24682591 | 24682713 | 24682591 | ID=cds.MS.gene011744.t1;Parent=MS.gene011744.t1 |
| chr8.2 | exon | 24681556 | 24681713 | 24681556 | ID=MS.gene011744.t1.exon3;Parent=MS.gene011744.t1 |
| chr8.2 | CDS | 24681556 | 24681713 | 24681556 | ID=cds.MS.gene011744.t1;Parent=MS.gene011744.t1 |
| chr8.2 | exon | 24681032 | 24681134 | 24681032 | ID=MS.gene011744.t1.exon4;Parent=MS.gene011744.t1 |
| chr8.2 | CDS | 24681032 | 24681134 | 24681032 | ID=cds.MS.gene011744.t1;Parent=MS.gene011744.t1 |
| chr8.2 | exon | 24679252 | 24679347 | 24679252 | ID=MS.gene011744.t1.exon5;Parent=MS.gene011744.t1 |
| chr8.2 | CDS | 24679252 | 24679347 | 24679252 | ID=cds.MS.gene011744.t1;Parent=MS.gene011744.t1 |
| chr8.2 | exon | 24678837 | 24678902 | 24678837 | ID=MS.gene011744.t1.exon6;Parent=MS.gene011744.t1 |
| chr8.2 | CDS | 24678837 | 24678902 | 24678837 | ID=cds.MS.gene011744.t1;Parent=MS.gene011744.t1 |
| chr8.2 | exon | 24678016 | 24678135 | 24678016 | ID=MS.gene011744.t1.exon7;Parent=MS.gene011744.t1 |
| chr8.2 | CDS | 24678016 | 24678135 | 24678016 | ID=cds.MS.gene011744.t1;Parent=MS.gene011744.t1 |
| chr8.2 | exon | 24677744 | 24677836 | 24677744 | ID=MS.gene011744.t1.exon8;Parent=MS.gene011744.t1 |
| chr8.2 | CDS | 24677744 | 24677836 | 24677744 | ID=cds.MS.gene011744.t1;Parent=MS.gene011744.t1 |
| Gene Sequence |
| Protein sequence |
