AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene01191

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene01191.t1 MTR_2g009220 97.543 529 9 2 1 525 1 529 0.0 1010
MS.gene01191.t1 MTR_4g065007 48.904 456 228 4 92 545 88 540 1.03e-142 423
MS.gene01191.t1 MTR_4g081600 35.468 203 106 4 338 525 410 602 1.02e-24 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene01191.t1 AT5G64290 74.388 531 124 5 1 525 1 525 0.0 752
MS.gene01191.t1 AT5G64280 63.774 530 168 5 1 525 1 511 0.0 649
MS.gene01191.t1 AT5G12860 46.705 516 247 6 27 525 15 519 4.44e-145 429
MS.gene01191.t1 AT5G12860 46.705 516 247 6 27 525 15 519 6.01e-145 429

Find 153 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGTCTCTTTGTGGATCTT+TGG 0.181386 2.2:+71229966 MS.gene01191:CDS
CCCTTGGGTTACGTGGTTTA+AGG 0.188381 2.2:+71229770 MS.gene01191:CDS
GGGTTTGTGAAGACGGGTTT+AGG 0.221874 2.2:+71228329 MS.gene01191:CDS
TCTGGTGTGTCTTTAATTTC+AGG 0.227085 2.2:-71229858 None:intergenic
CTTGAGCTGGCCGGCTTCAT+TGG 0.228307 2.2:+71231319 MS.gene01191:CDS
CTTTGCACCTTGAAGAATAT+TGG 0.229477 2.2:-71228033 None:intergenic
TCTTATTCAGAACCAATTTC+AGG 0.239407 2.2:+71228562 MS.gene01191:CDS
GGCTTCATTGGCTGTTCTTC+AGG 0.266545 2.2:+71231331 MS.gene01191:CDS
CAGTCTCTTTGTGGATCTTT+GGG 0.272268 2.2:+71229967 MS.gene01191:CDS
CTCTTAGAGGAGGGACTATT+AGG 0.283627 2.2:-71228527 None:intergenic
CCCGTTGCCGGTTGGAGCTT+GGG 0.292132 2.2:+71228190 MS.gene01191:CDS
TTATCAATACTCCTCGTCTT+AGG 0.295196 2.2:+71231143 MS.gene01191:CDS
GCAGCCAGGGCAGGTGCCTC+TGG 0.296528 2.2:-71229876 None:intergenic
TGCTTCTTGCAGTCTCTTTG+TGG 0.314222 2.2:+71229958 MS.gene01191:CDS
GCCCGTTGCCGGTTGGAGCT+TGG 0.316064 2.2:+71228189 MS.gene01191:CDS
AGTAAATCCAAACCTGAAAT+TGG 0.316565 2.2:-71228574 None:intergenic
TGCCCTGGCTGCAAAGAAAC+TGG 0.325452 2.2:+71229887 MS.gene01191:CDS
TTAAATTAGCACAGGAGCTT+GGG 0.329855 2.2:+71229733 MS.gene01191:CDS
ACTCTCGCAGCGCTTGCTTT+AGG 0.336598 2.2:+71231458 MS.gene01191:CDS
ATTGAAATTACAAAAGGAAT+TGG 0.340693 2.2:-71228056 None:intergenic
AGTGAAAGTGACTTAATAAT+AGG 0.342395 2.2:-71228488 None:intergenic
TTTGCACCTTGAAGAATATT+GGG 0.344765 2.2:-71228032 None:intergenic
CCTTGTGTTAAGCCCGTTGC+CGG 0.345696 2.2:+71228178 MS.gene01191:CDS
GAAAAGAGCGCTGGAGTTAC+CGG 0.347211 2.2:-71229679 None:intergenic
GCCCAGTCTGGCTTGCAAAA+AGG 0.352898 2.2:-71231376 None:intergenic
TTTGTAATTTCAATCTTGAT+TGG 0.355206 2.2:+71228065 MS.gene01191:CDS
AGTACTTTAGGACTTTCTTA+TGG 0.358141 2.2:+71228392 MS.gene01191:CDS
AAGGTTAAAGGTTGAAGGTT+TGG 0.358520 2.2:-71227940 None:intergenic
GGAGTTGAATTAGCATGAAT+TGG 0.359792 2.2:-71227981 None:intergenic
TCGTCTTAGGAGTCCTTGAC+TGG 0.360749 2.2:+71231156 MS.gene01191:CDS
CGCTCGCGGGTTTGTGAAGA+CGG 0.361497 2.2:+71228322 MS.gene01191:CDS
GGTGTAACTTCAACTGGTTT+AGG 0.377702 2.2:-71228110 None:intergenic
GGGTGGTAATTTCAAACCCT+TGG 0.378058 2.2:+71229754 MS.gene01191:CDS
GCTTGAGGTGTAACTTCAAC+TGG 0.380126 2.2:-71228116 None:intergenic
CCCAAGCTCCAACCGGCAAC+GGG 0.382342 2.2:-71228190 None:intergenic
GGTTTGTGAAGACGGGTTTA+GGG 0.387906 2.2:+71228330 MS.gene01191:CDS
TCAAAACCCAATATTCTTCA+AGG 0.391349 2.2:+71228026 MS.gene01191:CDS
ATGGCGGGCGTGTTATAGAT+AGG 0.392387 2.2:-71231556 None:intergenic
AAAAGCTCCCAATCTCTTAG+AGG 0.398809 2.2:-71228540 None:intergenic
TGGATGGGGAAGAGTACTTT+AGG 0.402380 2.2:+71228380 MS.gene01191:CDS
CAATCCCAAGGTTTGTCAAC+TGG 0.407857 2.2:-71231250 None:intergenic
AATTAGCATGAATTGGGAAA+TGG 0.409885 2.2:-71227974 None:intergenic
GTTTGCCATTCTAGTGGGTA+TGG 0.411337 2.2:+71231223 MS.gene01191:CDS
GAGAAAAGGTTAAAGGTTGA+AGG 0.411566 2.2:-71227945 None:intergenic
CAAGCCAGACTGGGCATGTA+GGG 0.411568 2.2:+71231384 MS.gene01191:CDS
TCTTGATTGGTCTCACTGTA+AGG 0.422985 2.2:+71228078 MS.gene01191:CDS
AGTTTCTTTGCAGCCAGGGC+AGG 0.427635 2.2:-71229885 None:intergenic
TTGTGACCACAGATGTTGTC+AGG 0.428553 2.2:-71228223 None:intergenic
CTTGCCATGCATAGGGCAGC+TGG 0.433935 2.2:+71231425 MS.gene01191:CDS
TAGTCCCTCCTCTAAGAGAT+TGG 0.440123 2.2:+71228532 MS.gene01191:CDS
GGTCAAGCTGCTGTATACTA+TGG 0.440740 2.2:+71231524 MS.gene01191:CDS
TTCGATCGTTCTCCTTGAGC+TGG 0.440822 2.2:+71231306 MS.gene01191:CDS
AGAAGGATTGCGATGATTTG+AGG 0.441991 2.2:-71227908 None:intergenic
GTTAAATTAGCACAGGAGCT+TGG 0.443116 2.2:+71229732 MS.gene01191:CDS
GCAAGCGCTGCGAGAGTACC+AGG 0.448469 2.2:-71231452 None:intergenic
CCCTGTCACACAAAATGAAT+GGG 0.451548 2.2:+71229920 MS.gene01191:CDS
GGTGGTAATTTCAAACCCTT+GGG 0.454290 2.2:+71229755 MS.gene01191:CDS
GATGGGATTGAACGTGGAGA+TGG 0.457634 2.2:-71227885 None:intergenic
ATGGGATTGAACGTGGAGAT+GGG 0.461331 2.2:-71227884 None:intergenic
GCCCAAGCTCCAACCGGCAA+CGG 0.461337 2.2:-71228191 None:intergenic
CACACCAGAGGCACCTGCCC+TGG 0.462143 2.2:+71229872 MS.gene01191:CDS
TTTCCAGTTTCTTTGCAGCC+AGG 0.463263 2.2:-71229890 None:intergenic
GAAGGATTGCGATGATTTGA+GGG 0.465872 2.2:-71227907 None:intergenic
GAGTTGAATTAGCATGAATT+GGG 0.465939 2.2:-71227980 None:intergenic
TTTGAAGGTGCTGATGGTGA+AGG 0.468476 2.2:-71228008 None:intergenic
CACACAAAATGAATGGGTTA+TGG 0.470045 2.2:+71229926 MS.gene01191:CDS
CATAGGGCAGCTGGTGTCCC+TGG 0.470166 2.2:+71231434 MS.gene01191:CDS
TGGTCTTGCAGAGAGACTCT+TGG 0.472309 2.2:+71231089 MS.gene01191:intron
CCAGCTCTAGCAGTAGTACT+AGG 0.475907 2.2:-71228452 None:intergenic
GCTCGCGGGTTTGTGAAGAC+GGG 0.479012 2.2:+71228323 MS.gene01191:CDS
GCTTGGTTTGCCATTCTAGT+GGG 0.480852 2.2:+71231218 MS.gene01191:CDS
GCAGTAGTACTAGGCATAGC+AGG 0.484964 2.2:-71228443 None:intergenic
GAAGGTGGGTGAAGAAGTTG+TGG 0.485403 2.2:-71227799 None:intergenic
AGTCCCTCCTCTAAGAGATT+GGG 0.486229 2.2:+71228533 MS.gene01191:CDS
AGCACTAAATGCAGCTGTAA+AGG 0.486387 2.2:-71228255 None:intergenic
AAGCCCCTACATGCCCAGTC+TGG 0.488462 2.2:-71231388 None:intergenic
TGCATTTCTTGCCATGCATA+GGG 0.488787 2.2:+71231418 MS.gene01191:CDS
TGCAAAGAAACTGGAAACGA+TGG 0.489852 2.2:+71229896 MS.gene01191:CDS
GGCTTGGTTTGCCATTCTAG+TGG 0.491057 2.2:+71231217 MS.gene01191:CDS
GCAAGCCAGTTGACAAACCT+TGG 0.492138 2.2:+71231245 MS.gene01191:CDS
ATCAAGATTGAAATTACAAA+AGG 0.492354 2.2:-71228062 None:intergenic
GTGTTAAGCCCGTTGCCGGT+TGG 0.495797 2.2:+71228182 MS.gene01191:CDS
GCCCTGTCACACAAAATGAA+TGG 0.496344 2.2:+71229919 MS.gene01191:CDS
ATTGCGATGATTTGAGGGAT+GGG 0.496565 2.2:-71227902 None:intergenic
AGAAAAGCCCAAGCTCCAAC+CGG 0.499960 2.2:-71228197 None:intergenic
TGTAATTGCACCGAAAAGAT+TGG 0.500834 2.2:-71231489 None:intergenic
AAGTCACTTTCACTCTCTGC+TGG 0.503849 2.2:+71228497 MS.gene01191:CDS
TGAAGAACAGCCAATGAAGC+CGG 0.505209 2.2:-71231329 None:intergenic
AGGTTTGGAGGGAAAAGAGA+AGG 0.505426 2.2:-71227925 None:intergenic
CGGCGTGGGATACCTTGGCT+TGG 0.507831 2.2:+71231201 MS.gene01191:CDS
GGTGCTGATGGTGAAGGTGG+TGG 0.508485 2.2:-71228002 None:intergenic
CTGCATTTCTTGCCATGCAT+AGG 0.509976 2.2:+71231417 MS.gene01191:CDS
CAATGAAGCCGGCCAGCTCA+AGG 0.512178 2.2:-71231318 None:intergenic
CAAGCCAGTTGACAAACCTT+GGG 0.513135 2.2:+71231246 MS.gene01191:CDS
ATCGTTCTCCTTGAGCTGGC+CGG 0.521340 2.2:+71231310 MS.gene01191:CDS
GATTGCGATGATTTGAGGGA+TGG 0.522341 2.2:-71227903 None:intergenic
GAGCTAATTAGTTAATTCGC+AGG 0.524828 2.2:-71231598 None:intergenic
AGAGAATTGAGATCTGAAGA+TGG 0.529793 2.2:-71227850 None:intergenic
TGAAGTGCAAAACTCTCCAT+TGG 0.529902 2.2:-71227768 None:intergenic
AGTGCTGTAGCTGCAATGCT+TGG 0.530608 2.2:+71231119 MS.gene01191:CDS
GCAAGAAGACAAACAAATGC+AGG 0.533080 2.2:-71229804 None:intergenic
GAAGGTGCTGATGGTGAAGG+TGG 0.533599 2.2:-71228005 None:intergenic
AGCGGTTAGGAAAAGAGCGC+TGG 0.538132 2.2:-71229688 None:intergenic
GCAAGCCAGACTGGGCATGT+AGG 0.538403 2.2:+71231383 MS.gene01191:CDS
GTTAAAGGTTGAAGGTTTGG+AGG 0.539881 2.2:-71227937 None:intergenic
GCCTTAAACCACGTAACCCA+AGG 0.543186 2.2:-71229771 None:intergenic
AAAATCGGCGTGGGATACCT+TGG 0.547524 2.2:+71231196 MS.gene01191:CDS
TCTTGGCCTGACAACATCTG+TGG 0.548489 2.2:+71228217 MS.gene01191:CDS
GACACCAGCTGCCCTATGCA+TGG 0.551779 2.2:-71231429 None:intergenic
CCTAGTACTACTGCTAGAGC+TGG 0.554496 2.2:+71228452 MS.gene01191:CDS
TTCCAGTTTCTTTGCAGCCA+GGG 0.558615 2.2:-71229889 None:intergenic
CAAACCTTGGGATTGTGAGC+TGG 0.559194 2.2:+71231258 MS.gene01191:CDS
CCGGCAACGGGCTTAACACA+AGG 0.563775 2.2:-71228178 None:intergenic
GAGAATTGAGATCTGAAGAT+GGG 0.569360 2.2:-71227849 None:intergenic
TTGAGGGATGGGATTGAACG+TGG 0.571420 2.2:-71227891 None:intergenic
GGAGAACGATCGAAGGCTGT+TGG 0.573491 2.2:-71231297 None:intergenic
GCTTGCCATACCCACTAGAA+TGG 0.574637 2.2:-71231228 None:intergenic
GCAAAGAAACTGGAAACGAT+GGG 0.575984 2.2:+71229897 MS.gene01191:CDS
ACGATGATGATGGAGGAAGA+AGG 0.579329 2.2:-71227817 None:intergenic
TGGCGGGCGTGTTATAGATA+GGG 0.579390 2.2:-71231555 None:intergenic
GGTGTGTCTTTAATTTCAGG+AGG 0.582059 2.2:-71229855 None:intergenic
TTAAAGGTTGAAGGTTTGGA+GGG 0.583670 2.2:-71227936 None:intergenic
TTTCAAACCCTTGGGTTACG+TGG 0.588383 2.2:+71229763 MS.gene01191:CDS
AGCTCCCAATCTCTTAGAGG+AGG 0.589921 2.2:-71228537 None:intergenic
CGTCTTAGGAGTCCTTGACT+GGG 0.590653 2.2:+71231157 MS.gene01191:CDS
CAAGGCCAGCTATAGTTGAA+AGG 0.594470 2.2:-71228160 None:intergenic
GCTCTGTGTTAAATTAGCAC+AGG 0.596919 2.2:+71229725 MS.gene01191:CDS
TCAAGCAGTCATCCCAGTCA+AGG 0.602001 2.2:-71231169 None:intergenic
CAAGCTGCTGTATACTATGG+AGG 0.606951 2.2:+71231527 MS.gene01191:CDS
TGTGACATGTAACAGTCTGC+CGG 0.610671 2.2:+71229660 MS.gene01191:intron
GTTTGTGAAGACGGGTTTAG+GGG 0.614584 2.2:+71228331 MS.gene01191:CDS
GAGCTGGATGTCTGATTGTG+TGG 0.615254 2.2:+71231274 MS.gene01191:CDS
AGCTCAAGGAGAACGATCGA+AGG 0.615633 2.2:-71231304 None:intergenic
TGATGATGGAGGAAGAAGGT+GGG 0.617705 2.2:-71227813 None:intergenic
TAAATTAGCACAGGAGCTTG+GGG 0.618128 2.2:+71229734 MS.gene01191:CDS
TTGAAGTTACACCTCAAGCA+TGG 0.624236 2.2:+71228120 MS.gene01191:CDS
GCTCCCAATCTCTTAGAGGA+GGG 0.627182 2.2:-71228536 None:intergenic
CCTTAAACCACGTAACCCAA+GGG 0.627527 2.2:-71229770 None:intergenic
AGTACTACTGCTAGAGCTGG+TGG 0.631739 2.2:+71228455 MS.gene01191:CDS
GAAAGCAATTGCCATGCTTG+AGG 0.636430 2.2:-71228131 None:intergenic
ATTAGCACAGGAGCTTGGGG+TGG 0.642898 2.2:+71229737 MS.gene01191:CDS
TAGATCGTGTATAAAATCAA+CGG 0.643604 2.2:-71229831 None:intergenic
ATGATGATGGAGGAAGAAGG+TGG 0.645201 2.2:-71227814 None:intergenic
TAGAATGGCAAACCAAGCCA+AGG 0.647704 2.2:-71231213 None:intergenic
GTGAAGAACGATGATGATGG+AGG 0.652249 2.2:-71227824 None:intergenic
AAGCCAGACTGGGCATGTAG+GGG 0.658449 2.2:+71231385 MS.gene01191:CDS
GTCGTGAAGAACGATGATGA+TGG 0.662492 2.2:-71227827 None:intergenic
ACATCCAGCTCACAATCCCA+AGG 0.664594 2.2:-71231262 None:intergenic
GCAATTACACACTATAGCAG+TGG 0.666445 2.2:+71231503 MS.gene01191:CDS
CAAGCGCTGCGAGAGTACCA+GGG 0.706701 2.2:-71231451 None:intergenic
AGTCAAGGACTCCTAAGACG+AGG 0.716369 2.2:-71231154 None:intergenic
TGAAATTAAAGACACACCAG+AGG 0.727115 2.2:+71229860 MS.gene01191:CDS
GTAGTGGATGAAGAAATAAG+CGG 0.766547 2.2:-71231354 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAATTCAATTATAAAATT+TGG + chr2.2:71229113-71229132 MS.gene01191:intron 10.0%
!! AAGATATATTAGTATTAATA+AGG - chr2.2:71230638-71230657 None:intergenic 10.0%
!! AGATATATTAGTATTAATAA+GGG - chr2.2:71230637-71230656 None:intergenic 10.0%
!! TTATTAATACTAATATATCT+TGG + chr2.2:71230637-71230656 MS.gene01191:intron 10.0%
!!! GCAATTTTTTTTTTTTTTAA+TGG + chr2.2:71229198-71229217 MS.gene01191:intron 10.0%
!! ATTTCATCTAATAAATATAG+AGG - chr2.2:71228868-71228887 None:intergenic 15.0%
!! GATATATTAGTATTAATAAG+GGG - chr2.2:71230636-71230655 None:intergenic 15.0%
!! TTAGTTTATAATGTTATACA+CGG + chr2.2:71228647-71228666 MS.gene01191:intron 15.0%
!!! ATTATTTTTGATTGAGTAAA+TGG + chr2.2:71230023-71230042 MS.gene01191:intron 15.0%
!! AAAGAAAAACAGAAATCATA+TGG - chr2.2:71231578-71231597 None:intergenic 20.0%
!! AATACTAATATATCTTGGAA+CGG + chr2.2:71230642-71230661 MS.gene01191:intron 20.0%
!! ATATAAATAGAGGTAACTTA+AGG + chr2.2:71229147-71229166 MS.gene01191:intron 20.0%
!! ATCAAGATTGAAATTACAAA+AGG - chr2.2:71228065-71228084 None:intergenic 20.0%
!! ATTGAAATTACAAAAGGAAT+TGG - chr2.2:71228059-71228078 None:intergenic 20.0%
!! CTTAATATACATGGAAAAAA+AGG + chr2.2:71230747-71230766 MS.gene01191:intron 20.0%
!! TAGCTTATGAAAAAAGTTAT+TGG + chr2.2:71230437-71230456 MS.gene01191:intron 20.0%
!! TCCATGTATATTAAGAAAAA+TGG - chr2.2:71230742-71230761 None:intergenic 20.0%
!! TTAGACATATTAATATACTC+AGG + chr2.2:71230668-71230687 MS.gene01191:intron 20.0%
!! TTATTAGAATTCATGTTCAA+CGG - chr2.2:71230198-71230217 None:intergenic 20.0%
!! TTGTTCATGAAAAAAGAAAA+AGG - chr2.2:71229098-71229117 None:intergenic 20.0%
!! TTTGTAATTTCAATCTTGAT+TGG + chr2.2:71228065-71228084 MS.gene01191:CDS 20.0%
!!! ACCATTTTTCTTAATATACA+TGG + chr2.2:71230738-71230757 MS.gene01191:intron 20.0%
!!! CTTTTACTAATGAAGTTATT+TGG + chr2.2:71228276-71228295 MS.gene01191:CDS 20.0%
!!! GGATAAAATACAATTTTACA+AGG - chr2.2:71229402-71229421 None:intergenic 20.0%
!!! GTAAAATTGTATTTTATCCT+TGG + chr2.2:71229403-71229422 MS.gene01191:intron 20.0%
!!! TGTGTCTTTTATTCAAAATA+CGG - chr2.2:71228937-71228956 None:intergenic 20.0%
! AGCAAATGACATATAAATAG+AGG + chr2.2:71229137-71229156 MS.gene01191:intron 25.0%
! AGTGAAAGTGACTTAATAAT+AGG - chr2.2:71228491-71228510 None:intergenic 25.0%
! ATCTAACATATATGTTAGCA+AGG - chr2.2:71228904-71228923 None:intergenic 25.0%
! ATTTAACCAAATAATCACTC+AGG + chr2.2:71229295-71229314 MS.gene01191:intron 25.0%
! CCTTTAACTCACAAAAATTA+GGG - chr2.2:71229029-71229048 None:intergenic 25.0%
! CTGAAAATATTGAACTTTGA+AGG + chr2.2:71230059-71230078 MS.gene01191:intron 25.0%
! GAAGTAGTTATGATTGAAAT+CGG + chr2.2:71228705-71228724 MS.gene01191:intron 25.0%
! GTTAATATGCATATGAGAAA+AGG - chr2.2:71230149-71230168 None:intergenic 25.0%
! GTTGAATTCAATACTATCAT+TGG + chr2.2:71231058-71231077 MS.gene01191:intron 25.0%
! TACTATCATTGGTATTTCTT+TGG + chr2.2:71231069-71231088 MS.gene01191:intron 25.0%
! TAGATCGTGTATAAAATCAA+CGG - chr2.2:71229834-71229853 None:intergenic 25.0%
! TCCTTTAACTCACAAAAATT+AGG - chr2.2:71229030-71229049 None:intergenic 25.0%
! TCTCATATGCATATTAACTT+TGG + chr2.2:71230151-71230170 MS.gene01191:intron 25.0%
! TGCATATTAACTTTGGATAT+AGG + chr2.2:71230158-71230177 MS.gene01191:intron 25.0%
!! GGTTATAATACCAATCTTTT+CGG + chr2.2:71231479-71231498 MS.gene01191:CDS 25.0%
!!! ACTTATTTTGTGAAATGGAT+GGG + chr2.2:71228365-71228384 MS.gene01191:CDS 25.0%
!!! TACTTATTTTGTGAAATGGA+TGG + chr2.2:71228364-71228383 MS.gene01191:CDS 25.0%
!!! TATTGACTTTAGAACTAGTT+AGG + chr2.2:71228811-71228830 MS.gene01191:intron 25.0%
!!! TTGCTACTTATTTTGTGAAA+TGG + chr2.2:71228360-71228379 MS.gene01191:CDS 25.0%
!!! TTTGATTTTATGAGACATGA+TGG + chr2.2:71229502-71229521 MS.gene01191:intron 25.0%
AAAAACAGAAATCATATGGC+GGG - chr2.2:71231574-71231593 None:intergenic 30.0%
AACCGATTGTAATTTCTTGA+CGG - chr2.2:71228787-71228806 None:intergenic 30.0%
AATCATGTATTCTCACTTCT+CGG + chr2.2:71229545-71229564 MS.gene01191:intron 30.0%
AATTAGCATGAATTGGGAAA+TGG - chr2.2:71227977-71227996 None:intergenic 30.0%
AGAGACAAAAAATGCTTCAA+GGG - chr2.2:71230561-71230580 None:intergenic 30.0%
AGTAAATCCAAACCTGAAAT+TGG - chr2.2:71228577-71228596 None:intergenic 30.0%
ATCTATCCTGAGTGATTATT+TGG - chr2.2:71229304-71229323 None:intergenic 30.0%
ATTAAGCTGTTTATCCAAGT+TGG + chr2.2:71230834-71230853 MS.gene01191:intron 30.0%
GAAAAACAGAAATCATATGG+CGG - chr2.2:71231575-71231594 None:intergenic 30.0%
GAACTCTTACACATAAAAGA+AGG - chr2.2:71230988-71231007 None:intergenic 30.0%
GAGTTGAATTAGCATGAATT+GGG - chr2.2:71227983-71228002 None:intergenic 30.0%
TACATGGAAAAAAAGGTAAG+AGG + chr2.2:71230754-71230773 MS.gene01191:intron 30.0%
TAGAGACAAAAAATGCTTCA+AGG - chr2.2:71230562-71230581 None:intergenic 30.0%
TCAAAACCCAATATTCTTCA+AGG + chr2.2:71228026-71228045 MS.gene01191:CDS 30.0%
TCAAATAAGTCAATCCAAAC+AGG - chr2.2:71230310-71230329 None:intergenic 30.0%
TCTTATTCAGAACCAATTTC+AGG + chr2.2:71228562-71228581 MS.gene01191:CDS 30.0%
TGACTGCTTGAATGAAAAAT+CGG + chr2.2:71231181-71231200 MS.gene01191:CDS 30.0%
TTCCATCATGTTTAATTGAG+AGG - chr2.2:71228966-71228985 None:intergenic 30.0%
TTTGCACCTTGAAGAATATT+GGG - chr2.2:71228035-71228054 None:intergenic 30.0%
! ATTTTCCTTTCAACTATAGC+TGG + chr2.2:71228155-71228174 MS.gene01191:CDS 30.0%
! CCCTAATTTTTGTGAGTTAA+AGG + chr2.2:71229026-71229045 MS.gene01191:intron 30.0%
! GTTCGGTGAAATTATAGTAT+AGG - chr2.2:71229581-71229600 None:intergenic 30.0%
!! AGTACTTTAGGACTTTCTTA+TGG + chr2.2:71228392-71228411 MS.gene01191:CDS 30.0%
!! TGAAGAATATTGGGTTTTGA+AGG - chr2.2:71228026-71228045 None:intergenic 30.0%
!!! CTCACTTTTTACTCTACTTA+AGG + chr2.2:71228599-71228618 MS.gene01191:intron 30.0%
!!! CTTATTTTGTGAAATGGATG+GGG + chr2.2:71228366-71228385 MS.gene01191:CDS 30.0%
!!! GAGTTTTGAGAAAAGGTTAA+AGG - chr2.2:71227955-71227974 None:intergenic 30.0%
!!! TCGGATGTTTTTTAATGATC+TGG + chr2.2:71228724-71228743 MS.gene01191:intron 30.0%
AAGGTTAAAGGTTGAAGGTT+TGG - chr2.2:71227943-71227962 None:intergenic 35.0%
AATAAGCTGAAAACTCCCTA+TGG - chr2.2:71230395-71230414 None:intergenic 35.0%
ACATCTTATGACATGTCCAT+AGG + chr2.2:71230376-71230395 MS.gene01191:intron 35.0%
AGAGAATTGAGATCTGAAGA+TGG - chr2.2:71227853-71227872 None:intergenic 35.0%
ATGCACCTAGTAAATTGCAT+AGG - chr2.2:71230595-71230614 None:intergenic 35.0%
CACCGTCAAGAAATTACAAT+CGG + chr2.2:71228782-71228801 MS.gene01191:intron 35.0%
CATCTTATGACATGTCCATA+GGG + chr2.2:71230377-71230396 MS.gene01191:intron 35.0%
CATGTTTAATTGAGAGGCAA+AGG - chr2.2:71228960-71228979 None:intergenic 35.0%
CTTTGCACCTTGAAGAATAT+TGG - chr2.2:71228036-71228055 None:intergenic 35.0%
GAGAAAAGGTTAAAGGTTGA+AGG - chr2.2:71227948-71227967 None:intergenic 35.0%
GAGAATTGAGATCTGAAGAT+GGG - chr2.2:71227852-71227871 None:intergenic 35.0%
GGAGTTGAATTAGCATGAAT+TGG - chr2.2:71227984-71228003 None:intergenic 35.0%
TGAAATTAAAGACACACCAG+AGG + chr2.2:71229860-71229879 MS.gene01191:CDS 35.0%
TGACATAAGCACTTGTGTTT+GGG + chr2.2:71230340-71230359 MS.gene01191:intron 35.0%
TGATTGAGTAAATGGTCTCA+TGG + chr2.2:71230031-71230050 MS.gene01191:intron 35.0%
TGCACCTAGTAAATTGCATA+GGG - chr2.2:71230594-71230613 None:intergenic 35.0%
TGCCTCTCAATTAAACATGA+TGG + chr2.2:71228961-71228980 MS.gene01191:intron 35.0%
TGCTTAGAAAAAGAGATGGA+GGG + chr2.2:71230777-71230796 MS.gene01191:intron 35.0%
TGTAATTGCACCGAAAAGAT+TGG - chr2.2:71231492-71231511 None:intergenic 35.0%
TGTGAGTTAAAGGAATGACT+TGG + chr2.2:71229036-71229055 MS.gene01191:intron 35.0%
TTAAAGGTTGAAGGTTTGGA+GGG - chr2.2:71227939-71227958 None:intergenic 35.0%
TTAAATTAGCACAGGAGCTT+GGG + chr2.2:71229733-71229752 MS.gene01191:CDS 35.0%
TTATCAATACTCCTCGTCTT+AGG + chr2.2:71231143-71231162 MS.gene01191:CDS 35.0%
! CTGTTTATCCAAGTTGGAAA+AGG + chr2.2:71230840-71230859 MS.gene01191:intron 35.0%
! TCTGGTGTGTCTTTAATTTC+AGG - chr2.2:71229861-71229880 None:intergenic 35.0%
!! CACACAAAATGAATGGGTTA+TGG + chr2.2:71229926-71229945 MS.gene01191:CDS 35.0%
!! GTAGTGGATGAAGAAATAAG+CGG - chr2.2:71231357-71231376 None:intergenic 35.0%
!! TTCAGAACCAATTTCAGGTT+TGG + chr2.2:71228567-71228586 MS.gene01191:intron 35.0%
!!! GGAAATGGAGTTTTGAGAAA+AGG - chr2.2:71227962-71227981 None:intergenic 35.0%
!!! TTATCATTGTTTTAGCCTCC+AGG + chr2.2:71230115-71230134 MS.gene01191:intron 35.0%
AAAAGCTCCCAATCTCTTAG+AGG - chr2.2:71228543-71228562 None:intergenic 40.0%
AGAAGGATTGCGATGATTTG+AGG - chr2.2:71227911-71227930 None:intergenic 40.0%
AGCACTAAATGCAGCTGTAA+AGG - chr2.2:71228258-71228277 None:intergenic 40.0%
ATAGTTAGGACAGAGGGAAT+AGG - chr2.2:71230533-71230552 None:intergenic 40.0%
ATTGCGATGATTTGAGGGAT+GGG - chr2.2:71227905-71227924 None:intergenic 40.0%
CAACCAAGAAATACAGCAAG+TGG - chr2.2:71229611-71229630 None:intergenic 40.0%
CAAGAAATACAGCAAGTGGA+AGG - chr2.2:71229607-71229626 None:intergenic 40.0%
CACCTAGTAAATTGCATAGG+GGG - chr2.2:71230592-71230611 None:intergenic 40.0%
CAGACTGTTACATGTCACAA+AGG - chr2.2:71229659-71229678 None:intergenic 40.0%
CAGTCTCTTTGTGGATCTTT+GGG + chr2.2:71229967-71229986 MS.gene01191:CDS 40.0%
CATGGATCAAAACAGAACCA+AGG - chr2.2:71229423-71229442 None:intergenic 40.0%
CCCTGTCACACAAAATGAAT+GGG + chr2.2:71229920-71229939 MS.gene01191:CDS 40.0%
CTGACATAAGCACTTGTGTT+TGG + chr2.2:71230339-71230358 MS.gene01191:intron 40.0%
CTTCAAGGGAGCTTATAGTT+AGG - chr2.2:71230547-71230566 None:intergenic 40.0%
CTTGAATGAAAAATCGGCGT+GGG + chr2.2:71231187-71231206 MS.gene01191:CDS 40.0%
GAAGGATTGCGATGATTTGA+GGG - chr2.2:71227910-71227929 None:intergenic 40.0%
GACTTGCACAGGTATAGTTT+GGG - chr2.2:71230959-71230978 None:intergenic 40.0%
GAGCTTATAGTTAGGACAGA+GGG - chr2.2:71230539-71230558 None:intergenic 40.0%
GCAAAGAAACTGGAAACGAT+GGG + chr2.2:71229897-71229916 MS.gene01191:CDS 40.0%
GCAAGAAGACAAACAAATGC+AGG - chr2.2:71229807-71229826 None:intergenic 40.0%
GCAATTACACACTATAGCAG+TGG + chr2.2:71231503-71231522 MS.gene01191:CDS 40.0%
GCACCTAGTAAATTGCATAG+GGG - chr2.2:71230593-71230612 None:intergenic 40.0%
GCTCTGTGTTAAATTAGCAC+AGG + chr2.2:71229725-71229744 MS.gene01191:CDS 40.0%
GGTGGTAATTTCAAACCCTT+GGG + chr2.2:71229755-71229774 MS.gene01191:CDS 40.0%
GTGCTTAGAAAAAGAGATGG+AGG + chr2.2:71230776-71230795 MS.gene01191:intron 40.0%
GTTAAAGGTTGAAGGTTTGG+AGG - chr2.2:71227940-71227959 None:intergenic 40.0%
GTTAAATTAGCACAGGAGCT+TGG + chr2.2:71229732-71229751 MS.gene01191:CDS 40.0%
TAAATTAGCACAGGAGCTTG+GGG + chr2.2:71229734-71229753 MS.gene01191:CDS 40.0%
TGAGAAAAGGAGCTTAAACC+TGG - chr2.2:71230136-71230155 None:intergenic 40.0%
TGCAAAGAAACTGGAAACGA+TGG + chr2.2:71229896-71229915 MS.gene01191:CDS 40.0%
TGCATTTCTTGCCATGCATA+GGG + chr2.2:71231418-71231437 MS.gene01191:CDS 40.0%
TTGAAGTTACACCTCAAGCA+TGG + chr2.2:71228120-71228139 MS.gene01191:CDS 40.0%
! ACCCATTCATTTTGTGTGAC+AGG - chr2.2:71229924-71229943 None:intergenic 40.0%
! ATTTCCATAAGCTGACTCAC+TGG + chr2.2:71230412-71230431 MS.gene01191:intron 40.0%
! CCCATTCATTTTGTGTGACA+GGG - chr2.2:71229923-71229942 None:intergenic 40.0%
! GAAGGTATAATGACTTGCAC+AGG - chr2.2:71230970-71230989 None:intergenic 40.0%
! GAGGTGCTTAGAAAAAGAGA+TGG + chr2.2:71230773-71230792 MS.gene01191:intron 40.0%
! GGTGTAACTTCAACTGGTTT+AGG - chr2.2:71228113-71228132 None:intergenic 40.0%
! GGTGTGTCTTTAATTTCAGG+AGG - chr2.2:71229858-71229877 None:intergenic 40.0%
! TGACTTGCACAGGTATAGTT+TGG - chr2.2:71230960-71230979 None:intergenic 40.0%
! TTTCCATAAGCTGACTCACT+GGG + chr2.2:71230413-71230432 MS.gene01191:intron 40.0%
!! ATATCGTTTTTCTTCGCTCG+CGG + chr2.2:71228308-71228327 MS.gene01191:CDS 40.0%
!! CTTCCACTTGCTGTATTTCT+TGG + chr2.2:71229605-71229624 MS.gene01191:intron 40.0%
!! TCTTGATTGGTCTCACTGTA+AGG + chr2.2:71228078-71228097 MS.gene01191:CDS 40.0%
AATCCAAACAGGCCCTAAGT+GGG - chr2.2:71230299-71230318 None:intergenic 45.0%
AATGAGTGGAGTGGGATACA+TGG - chr2.2:71229441-71229460 None:intergenic 45.0%
AGCCCCCTATGCAATTTACT+AGG + chr2.2:71230587-71230606 MS.gene01191:intron 45.0%
AGGTTTGGAGGGAAAAGAGA+AGG - chr2.2:71227928-71227947 None:intergenic 45.0%
ATGGGATTGAACGTGGAGAT+GGG - chr2.2:71227887-71227906 None:intergenic 45.0%
ATGTATCCCACTCCACTCAT+TGG + chr2.2:71229440-71229459 MS.gene01191:intron 45.0%
CAAGCCAGTTGACAAACCTT+GGG + chr2.2:71231246-71231265 MS.gene01191:CDS 45.0%
CAAGCTGCTGTATACTATGG+AGG + chr2.2:71231527-71231546 MS.gene01191:CDS 45.0%
CAAGGCCAGCTATAGTTGAA+AGG - chr2.2:71228163-71228182 None:intergenic 45.0%
CAATCCCAAGGTTTGTCAAC+TGG - chr2.2:71231253-71231272 None:intergenic 45.0%
CCTTAAACCACGTAACCCAA+GGG - chr2.2:71229773-71229792 None:intergenic 45.0%
CTCAGATGATATTGCCACCT+TGG + chr2.2:71229364-71229383 MS.gene01191:intron 45.0%
CTCTTAGAGGAGGGACTATT+AGG - chr2.2:71228530-71228549 None:intergenic 45.0%
CTGCATTTCTTGCCATGCAT+AGG + chr2.2:71231417-71231436 MS.gene01191:CDS 45.0%
CTTATCCCAATGAGTGGAGT+GGG - chr2.2:71229449-71229468 None:intergenic 45.0%
CTTGTGTTTGGGAGAGCTTA+TGG + chr2.2:71230351-71230370 MS.gene01191:intron 45.0%
GAAAAGGAGCTTAAACCTGG+AGG - chr2.2:71230133-71230152 None:intergenic 45.0%
GAAAGCAATTGCCATGCTTG+AGG - chr2.2:71228134-71228153 None:intergenic 45.0%
GATTGCGATGATTTGAGGGA+TGG - chr2.2:71227906-71227925 None:intergenic 45.0%
GCAGTCTCTTTGTGGATCTT+TGG + chr2.2:71229966-71229985 MS.gene01191:CDS 45.0%
GCCCTGTCACACAAAATGAA+TGG + chr2.2:71229919-71229938 MS.gene01191:CDS 45.0%
GCTTGAATGAAAAATCGGCG+TGG + chr2.2:71231186-71231205 MS.gene01191:CDS 45.0%
GCTTGAGGTGTAACTTCAAC+TGG - chr2.2:71228119-71228138 None:intergenic 45.0%
GGAGCTTATAGTTAGGACAG+AGG - chr2.2:71230540-71230559 None:intergenic 45.0%
GGGTGGTAATTTCAAACCCT+TGG + chr2.2:71229754-71229773 MS.gene01191:CDS 45.0%
GGTCAAGCTGCTGTATACTA+TGG + chr2.2:71231524-71231543 MS.gene01191:CDS 45.0%
GTCGTGAAGAACGATGATGA+TGG - chr2.2:71227830-71227849 None:intergenic 45.0%
TAGAATGGCAAACCAAGCCA+AGG - chr2.2:71231216-71231235 None:intergenic 45.0%
TATCCCAGTGAGTCAGCTTA+TGG - chr2.2:71230419-71230438 None:intergenic 45.0%
TGAAGAACAGCCAATGAAGC+CGG - chr2.2:71231332-71231351 None:intergenic 45.0%
TGCTTCTTGCAGTCTCTTTG+TGG + chr2.2:71229958-71229977 MS.gene01191:CDS 45.0%
TGTATCCCACTCCACTCATT+GGG + chr2.2:71229441-71229460 MS.gene01191:intron 45.0%
TGTGACATGTAACAGTCTGC+CGG + chr2.2:71229660-71229679 MS.gene01191:intron 45.0%
TTCCAGTTTCTTTGCAGCCA+GGG - chr2.2:71229892-71229911 None:intergenic 45.0%
TTGTGACCACAGATGTTGTC+AGG - chr2.2:71228226-71228245 None:intergenic 45.0%
TTTCAAACCCTTGGGTTACG+TGG + chr2.2:71229763-71229782 MS.gene01191:CDS 45.0%
TTTCCAGTTTCTTTGCAGCC+AGG - chr2.2:71229893-71229912 None:intergenic 45.0%
! AAGTCACTTTCACTCTCTGC+TGG + chr2.2:71228497-71228516 MS.gene01191:CDS 45.0%
! ACCTTTTTGCAAGCCAGACT+GGG + chr2.2:71231375-71231394 MS.gene01191:CDS 45.0%
! AGTCCCTCCTCTAAGAGATT+GGG + chr2.2:71228533-71228552 MS.gene01191:CDS 45.0%
! AGTCGATGCCTTTTCCAACT+TGG - chr2.2:71230851-71230870 None:intergenic 45.0%
! GGTGGTGGTTGTTGTTGTAT+TGG + chr2.2:71229473-71229492 MS.gene01191:intron 45.0%
! GGTTTGTGAAGACGGGTTTA+GGG + chr2.2:71228330-71228349 MS.gene01191:CDS 45.0%
! GTTTGCCATTCTAGTGGGTA+TGG + chr2.2:71231223-71231242 MS.gene01191:CDS 45.0%
! GTTTGTGAAGACGGGTTTAG+GGG + chr2.2:71228331-71228350 MS.gene01191:CDS 45.0%
! TACCTTTTTGCAAGCCAGAC+TGG + chr2.2:71231374-71231393 MS.gene01191:CDS 45.0%
! TAGTCCCTCCTCTAAGAGAT+TGG + chr2.2:71228532-71228551 MS.gene01191:CDS 45.0%
! TCTGGCTTGCAAAAAGGTAG+TGG - chr2.2:71231373-71231392 None:intergenic 45.0%
!! ACGATGATGATGGAGGAAGA+AGG - chr2.2:71227820-71227839 None:intergenic 45.0%
!! ATGATGATGGAGGAAGAAGG+TGG - chr2.2:71227817-71227836 None:intergenic 45.0%
!! GCTTGGTTTGCCATTCTAGT+GGG + chr2.2:71231218-71231237 MS.gene01191:CDS 45.0%
!! GTGAAGAACGATGATGATGG+AGG - chr2.2:71227827-71227846 None:intergenic 45.0%
!! TATCGTTTTTCTTCGCTCGC+GGG + chr2.2:71228309-71228328 MS.gene01191:CDS 45.0%
!! TGATGATGGAGGAAGAAGGT+GGG - chr2.2:71227816-71227835 None:intergenic 45.0%
!! TGGATGGGGAAGAGTACTTT+AGG + chr2.2:71228380-71228399 MS.gene01191:CDS 45.0%
!! TTTGAAGGTGCTGATGGTGA+AGG - chr2.2:71228011-71228030 None:intergenic 45.0%
!!! TTGGGTTTTGAAGGTGCTGA+TGG - chr2.2:71228017-71228036 None:intergenic 45.0%
!! AAAATTCTAATAAAATATTA+TGG + chr2.2:71230249-71230268 MS.gene01191:intron 5.0%
AAAATCGGCGTGGGATACCT+TGG + chr2.2:71231196-71231215 MS.gene01191:CDS 50.0%
ACATCCAGCTCACAATCCCA+AGG - chr2.2:71231265-71231284 None:intergenic 50.0%
AGAAAAGCCCAAGCTCCAAC+CGG - chr2.2:71228200-71228219 None:intergenic 50.0%
AGCTCAAGGAGAACGATCGA+AGG - chr2.2:71231307-71231326 None:intergenic 50.0%
AGCTCCCAATCTCTTAGAGG+AGG - chr2.2:71228540-71228559 None:intergenic 50.0%
AGTACTACTGCTAGAGCTGG+TGG + chr2.2:71228455-71228474 MS.gene01191:CDS 50.0%
AGTCAAGGACTCCTAAGACG+AGG - chr2.2:71231157-71231176 None:intergenic 50.0%
AGTGCTGTAGCTGCAATGCT+TGG + chr2.2:71231119-71231138 MS.gene01191:CDS 50.0%
ATCCAAACAGGCCCTAAGTG+GGG - chr2.2:71230298-71230317 None:intergenic 50.0%
CAAACCTTGGGATTGTGAGC+TGG + chr2.2:71231258-71231277 MS.gene01191:CDS 50.0%
CAATCCAAACAGGCCCTAAG+TGG - chr2.2:71230300-71230319 None:intergenic 50.0%
CAGCAAGTGGAAGGAGAGTT+CGG - chr2.2:71229598-71229617 None:intergenic 50.0%
CCACTCATTGGGATAAGGCT+TGG + chr2.2:71229452-71229471 MS.gene01191:intron 50.0%
CCACTCCACTCATTGGGATA+AGG + chr2.2:71229447-71229466 MS.gene01191:intron 50.0%
CCCTTGGGTTACGTGGTTTA+AGG + chr2.2:71229770-71229789 MS.gene01191:CDS 50.0%
CCTAGTACTACTGCTAGAGC+TGG + chr2.2:71228452-71228471 MS.gene01191:CDS 50.0%
CCTTATCCCAATGAGTGGAG+TGG - chr2.2:71229450-71229469 None:intergenic 50.0%
CGTCTTAGGAGTCCTTGACT+GGG + chr2.2:71231157-71231176 MS.gene01191:CDS 50.0%
CTCATTGGGATAAGGCTTGG+TGG + chr2.2:71229455-71229474 MS.gene01191:intron 50.0%
GAAGGTGGGTGAAGAAGTTG+TGG - chr2.2:71227802-71227821 None:intergenic 50.0%
GAGCTGGATGTCTGATTGTG+TGG + chr2.2:71231274-71231293 MS.gene01191:CDS 50.0%
GATGGGATTGAACGTGGAGA+TGG - chr2.2:71227888-71227907 None:intergenic 50.0%
GCAAGCCAGTTGACAAACCT+TGG + chr2.2:71231245-71231264 MS.gene01191:CDS 50.0%
GCAGTAGTACTAGGCATAGC+AGG - chr2.2:71228446-71228465 None:intergenic 50.0%
GCCTTAAACCACGTAACCCA+AGG - chr2.2:71229774-71229793 None:intergenic 50.0%
GCTCCCAATCTCTTAGAGGA+GGG - chr2.2:71228539-71228558 None:intergenic 50.0%
GCTTGCCATACCCACTAGAA+TGG - chr2.2:71231231-71231250 None:intergenic 50.0%
TCAAGCAGTCATCCCAGTCA+AGG - chr2.2:71231172-71231191 None:intergenic 50.0%
TCGTCTTAGGAGTCCTTGAC+TGG + chr2.2:71231156-71231175 MS.gene01191:CDS 50.0%
TCTTGGCCTGACAACATCTG+TGG + chr2.2:71228217-71228236 MS.gene01191:CDS 50.0%
TTCGATCGTTCTCCTTGAGC+TGG + chr2.2:71231306-71231325 MS.gene01191:CDS 50.0%
TTGAGGGATGGGATTGAACG+TGG - chr2.2:71227894-71227913 None:intergenic 50.0%
! CAAGGCAAAAGCGTACACCA+AGG - chr2.2:71229384-71229403 None:intergenic 50.0%
! CCAAGCCTTATCCCAATGAG+TGG - chr2.2:71229455-71229474 None:intergenic 50.0%
! CCAGCTCTAGCAGTAGTACT+AGG - chr2.2:71228455-71228474 None:intergenic 50.0%
! GAGCAGATTTTGAGCAGCAG+CGG - chr2.2:71229709-71229728 None:intergenic 50.0%
! GATTTTGAGCAGCAGCGGTT+AGG - chr2.2:71229704-71229723 None:intergenic 50.0%
! GGCTTCATTGGCTGTTCTTC+AGG + chr2.2:71231331-71231350 MS.gene01191:CDS 50.0%
! GGGTTTGTGAAGACGGGTTT+AGG + chr2.2:71228329-71228348 MS.gene01191:CDS 50.0%
! GTTGGAGCTTGGGCTTTTCT+TGG + chr2.2:71228200-71228219 MS.gene01191:CDS 50.0%
! TGGCGGGCGTGTTATAGATA+GGG - chr2.2:71231558-71231577 None:intergenic 50.0%
! TGGTCTTGCAGAGAGACTCT+TGG + chr2.2:71231089-71231108 MS.gene01191:intron 50.0%
!! ATGGCGGGCGTGTTATAGAT+AGG - chr2.2:71231559-71231578 None:intergenic 50.0%
!! ATTGGGATAAGGCTTGGTGG+TGG + chr2.2:71229458-71229477 MS.gene01191:intron 50.0%
!! GAAAAGAGCGCTGGAGTTAC+CGG - chr2.2:71229682-71229701 None:intergenic 50.0%
!! GAACGTGGAGATGGGTTTTG+TGG - chr2.2:71227879-71227898 None:intergenic 50.0%
!! GGCTTGGTTTGCCATTCTAG+TGG + chr2.2:71231217-71231236 MS.gene01191:CDS 50.0%
AAACAGGCCCTAAGTGGGGT+TGG - chr2.2:71230294-71230313 None:intergenic 55.0%
AACCCCACTTAGGGCCTGTT+TGG + chr2.2:71230293-71230312 MS.gene01191:intron 55.0%
AAGCCAGACTGGGCATGTAG+GGG + chr2.2:71231385-71231404 MS.gene01191:CDS 55.0%
ACTCTCGCAGCGCTTGCTTT+AGG + chr2.2:71231458-71231477 MS.gene01191:CDS 55.0%
AGTTTCTTTGCAGCCAGGGC+AGG - chr2.2:71229888-71229907 None:intergenic 55.0%
ATCGTTCTCCTTGAGCTGGC+CGG + chr2.2:71231310-71231329 MS.gene01191:CDS 55.0%
ATTAGCACAGGAGCTTGGGG+TGG + chr2.2:71229737-71229756 MS.gene01191:CDS 55.0%
CAAGCCAGACTGGGCATGTA+GGG + chr2.2:71231384-71231403 MS.gene01191:CDS 55.0%
CACGTAGCCAACCCCACTTA+GGG + chr2.2:71230284-71230303 MS.gene01191:intron 55.0%
CCTTGTGTTAAGCCCGTTGC+CGG + chr2.2:71228178-71228197 MS.gene01191:CDS 55.0%
GGAGAACGATCGAAGGCTGT+TGG - chr2.2:71231300-71231319 None:intergenic 55.0%
TGCCCTGGCTGCAAAGAAAC+TGG + chr2.2:71229887-71229906 MS.gene01191:CDS 55.0%
! AGCGGTTAGGAAAAGAGCGC+TGG - chr2.2:71229691-71229710 None:intergenic 55.0%
! GCCCAGTCTGGCTTGCAAAA+AGG - chr2.2:71231379-71231398 None:intergenic 55.0%
! GGCAAAAGCGTACACCAAGG+TGG - chr2.2:71229381-71229400 None:intergenic 55.0%
!! GAAGGTGCTGATGGTGAAGG+TGG - chr2.2:71228008-71228027 None:intergenic 55.0%
AAGCCCCTACATGCCCAGTC+TGG - chr2.2:71231391-71231410 None:intergenic 60.0%
CAATGAAGCCGGCCAGCTCA+AGG - chr2.2:71231321-71231340 None:intergenic 60.0%
CCACGTAGCCAACCCCACTT+AGG + chr2.2:71230283-71230302 MS.gene01191:intron 60.0%
CGCTCGCGGGTTTGTGAAGA+CGG + chr2.2:71228322-71228341 MS.gene01191:CDS 60.0%
CTTGCCATGCATAGGGCAGC+TGG + chr2.2:71231425-71231444 MS.gene01191:CDS 60.0%
GACACCAGCTGCCCTATGCA+TGG - chr2.2:71231432-71231451 None:intergenic 60.0%
GCAAGCCAGACTGGGCATGT+AGG + chr2.2:71231383-71231402 MS.gene01191:CDS 60.0%
GCTCGCGGGTTTGTGAAGAC+GGG + chr2.2:71228323-71228342 MS.gene01191:CDS 60.0%
GTGTTAAGCCCGTTGCCGGT+TGG + chr2.2:71228182-71228201 MS.gene01191:CDS 60.0%
! CCGGCAACGGGCTTAACACA+AGG - chr2.2:71228181-71228200 None:intergenic 60.0%
! CTTGAGCTGGCCGGCTTCAT+TGG + chr2.2:71231319-71231338 MS.gene01191:CDS 60.0%
!! CAAGCGCTGCGAGAGTACCA+GGG - chr2.2:71231454-71231473 None:intergenic 60.0%
!! CCTAAGTGGGGTTGGCTACG+TGG - chr2.2:71230286-71230305 None:intergenic 60.0%
!! GGTGCTGATGGTGAAGGTGG+TGG - chr2.2:71228005-71228024 None:intergenic 60.0%
CATAGGGCAGCTGGTGTCCC+TGG + chr2.2:71231434-71231453 MS.gene01191:CDS 65.0%
CCCAAGCTCCAACCGGCAAC+GGG - chr2.2:71228193-71228212 None:intergenic 65.0%
CGGCGTGGGATACCTTGGCT+TGG + chr2.2:71231201-71231220 MS.gene01191:CDS 65.0%
GCCCAAGCTCCAACCGGCAA+CGG - chr2.2:71228194-71228213 None:intergenic 65.0%
! CCCGTTGCCGGTTGGAGCTT+GGG + chr2.2:71228190-71228209 MS.gene01191:CDS 65.0%
!! GCAAGCGCTGCGAGAGTACC+AGG - chr2.2:71231455-71231474 None:intergenic 65.0%
! GCCCGTTGCCGGTTGGAGCT+TGG + chr2.2:71228189-71228208 MS.gene01191:CDS 70.0%
!! CACACCAGAGGCACCTGCCC+TGG + chr2.2:71229872-71229891 MS.gene01191:CDS 70.0%
GCAGCCAGGGCAGGTGCCTC+TGG - chr2.2:71229879-71229898 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 71227771 71231613 71227771 ID=MS.gene01191
chr2.2 mRNA 71227771 71231613 71227771 ID=MS.gene01191.t1;Parent=MS.gene01191
chr2.2 exon 71227771 71228583 71227771 ID=MS.gene01191.t1.exon1;Parent=MS.gene01191.t1
chr2.2 CDS 71227771 71228583 71227771 ID=cds.MS.gene01191.t1;Parent=MS.gene01191.t1
chr2.2 exon 71229675 71229988 71229675 ID=MS.gene01191.t1.exon2;Parent=MS.gene01191.t1
chr2.2 CDS 71229675 71229988 71229675 ID=cds.MS.gene01191.t1;Parent=MS.gene01191.t1
chr2.2 exon 71231100 71231613 71231100 ID=MS.gene01191.t1.exon3;Parent=MS.gene01191.t1
chr2.2 CDS 71231100 71231613 71231100 ID=cds.MS.gene01191.t1;Parent=MS.gene01191.t1
Gene Sequence

>MS.gene01191

ATGGAGAGTTTTGCACTTCACTCACTCTCCACAACTTCTTCACCCACCTTCTTCCTCCATCATCATCGTTCTTCACGACCCATCTTCAGATCTCAATTCTCTCTTCCACAAAACCCATCTCCACGTTCAATCCCATCCCTCAAATCATCGCAATCCTTCTCTTTTCCCTCCAAACCTTCAACCTTTAACCTTTTCTCAAAACTCCATTTCCCAATTCATGCTAATTCAACTCCACCACCTTCACCATCAGCACCTTCAAAACCCAATATTCTTCAAGGTGCAAAGCCAATTCCTTTTGTAATTTCAATCTTGATTGGTCTCACTGTAAGGTTCTTTGTTCCTAAACCAGTTGAAGTTACACCTCAAGCATGGCAATTGCTTTCAATTTTCCTTTCAACTATAGCTGGCCTTGTGTTAAGCCCGTTGCCGGTTGGAGCTTGGGCTTTTCTTGGCCTGACAACATCTGTGGTCACAAAAACTCTAACCTTTACAGCTGCATTTAGTGCTTTTACTAATGAAGTTATTTGGTTGATTGTGATATCGTTTTTCTTCGCTCGCGGGTTTGTGAAGACGGGTTTAGGGGATAGAATTGCTACTTATTTTGTGAAATGGATGGGGAAGAGTACTTTAGGACTTTCTTATGGTTTGACATTTAGTGAAGTTCTTATTGCACCTGCTATGCCTAGTACTACTGCTAGAGCTGGTGGTGTTTTTTTGCCTATTATTAAGTCACTTTCACTCTCTGCTGGTAGTGAACCTAATAGTCCCTCCTCTAAGAGATTGGGAGCTTTTCTTATTCAGAACCAATTTCAGGTTTGGATTTACTCTCTCACTTTTTACTCTACTTAAGGTTAAGAGCTTAGTTTTGATATAATGTTAGTTTATAATGTTATACACGGTCAACAAACTACAATCGATTATATGATTGAATTGAGAAGTAGTTATGATTGAAATCGGATGTTTTTTAATGATCTGGTGACTGTGAATATAATGTGAGTTTAAAATGTTCTACACCGTCAAGAAATTACAATCGGTTATATTATTGACTTTAGAACTAGTTAGGATTGAAATCAAATGTTTTTAACAATCTGACACCTCTATATTTATTAGATGAAATGAAATTGTGTTCACCTTGCTAACATATATGTTAGATCACACATACACCGTATTTTGAATAAAAGACACACCTTTGCCTCTCAATTAAACATGATGGAAAGTGTGTCATTTAAGTACAATTCAGAGAAAGTGTGCTTTTCCCTAATTTTTGTGAGTTAAAGGAATGACTTGGCATGCTGTGATTACTGCAATACAAGCATGATCATTTCCTTTTTCTTTTTTCATGAACAATTCAATTATAAAATTTGGAAGCAAATGACATATAAATAGAGGTAACTTAAGGAGTTAATATAAGAACGTTTGATTTGAATGCAATTTTTTTTTTTTTTAATGGAAAGTTCTATGACAAAATTTTCAGATGATTTAGTGAATACATTGAAGTGAAAAAAAATCATTTTACAGTTGAATATTTAACCAAATAATCACTCAGGATAGATTTCATGACATTTGTTTTTTCAAATTTCGCTTGTGAAACAACTCAGATGATATTGCCACCTTGGTGTACGCTTTTGCCTTGTAAAATTGTATTTTATCCTTGGTTCTGTTTTGATCCATGTATCCCACTCCACTCATTGGGATAAGGCTTGGTGGTGGTTGTTGTTGTATTGGTTGTGTTTTGATTTTATGAGACATGATGGCTTTCTGTATTGCTTTTTATAATCATGTATTCTCACTTCTCGGCAATGATCATCCTATACTATAATTTCACCGAACTCTCCTTCCACTTGCTGTATTTCTTGGTTGTGTCAATGAAATAACTTTTGTGTTGCCTTTGTGACATGTAACAGTCTGCCGGTAACTCCAGCGCTCTTTTCCTAACCGCTGCTGCTCAAAATCTGCTCTGTGTTAAATTAGCACAGGAGCTTGGGGTGGTAATTTCAAACCCTTGGGTTACGTGGTTTAAGGCAGCTAGTTTACCTGCATTTGTTTGTCTTCTTGCTACACCGTTGATTTTATACACGATCTATCCTCCTGAAATTAAAGACACACCAGAGGCACCTGCCCTGGCTGCAAAGAAACTGGAAACGATGGGCCCTGTCACACAAAATGAATGGGTTATGGTTGCTACAATGCTTCTTGCAGTCTCTTTGTGGATCTTTGGGTATGTCATATGCTTTCTACTGCATTAGTCTATCATTATTTTTGATTGAGTAAATGGTCTCATGGTGATGCTGAAAATATTGAACTTTGAAGGAAGAGTGTTTCTTCAAGTAATAATTTATAGTTTTTATCATTGTTTTAGCCTCCAGGTTTAAGCTCCTTTTCTCATATGCATATTAACTTTGGATATAGGAAATAATTGCTCTTCCGTTGAACATGAATTCTAATAAAATATTCTAATAACTAATCATATCAATAAAAAAAATTCTAATAAAATATTATGGTGCAATTTAATCCACGTAGCCAACCCCACTTAGGGCCTGTTTGGATTGACTTATTTGAGTTTATTTACTGACATAAGCACTTGTGTTTGGGAGAGCTTATGGAAACATCTTATGACATGTCCATAGGGAGTTTTCAGCTTATTTCCATAAGCTGACTCACTGGGATAGCTTATGAAAAAAGTTATTGGCTATTACTTGTATGAAAATTATCTGACTTTATTTTAAATTTTTGTTATAGAAATAGCTTATATATTAACACCTATTCCCTCTGTCCTAACTATAAGCTCCCTTGAAGCATTTTTTGTCTCTAAATTTAGCCCCCTATGCAATTTACTAGGTGCATTTTTTTTCTTCATACATGCCCCTTATTAATACTAATATATCTTGGAACGGAAGTTAGACATATTAATATACTCAGGATATTATAAGAAGATCTACATACAAAAAGAACACATTAAATTCACTAACCATTTTTCTTAATATACATGGAAAAAAAGGTAAGAGGTGCTTAGAAAAAGAGATGGAGGGAGTATATGATAAGCGCTTATATTATCAGTGCTTAATTAAGCTGTTTATCCAAGTTGGAAAAGGCATCGACTGTTGTTGTGTATAATAAGTTATGATTATGATGTGATATCGTCATATCATTTGCAAATAGTTGTAGTTTATTTTATTTGATGTCTTCCCAAACTATACCTGTGCAAGTCATTATACCTTCTTTTATGTGTAAGAGTTCACTTGCTACATCTGTAGATTGTTGTTTCTCTCACAATGCAATTTCAACTAGTTGAATTCAATACTATCATTGGTATTTCTTTGGTCTTGCAGAGAGACTCTTGGCATAGCAAGTGCTGTAGCTGCAATGCTTGGTTTATCAATACTCCTCGTCTTAGGAGTCCTTGACTGGGATGACTGCTTGAATGAAAAATCGGCGTGGGATACCTTGGCTTGGTTTGCCATTCTAGTGGGTATGGCAAGCCAGTTGACAAACCTTGGGATTGTGAGCTGGATGTCTGATTGTGTGGCCAACAGCCTTCGATCGTTCTCCTTGAGCTGGCCGGCTTCATTGGCTGTTCTTCAGGCCGCTTATTTCTTCATCCACTACCTTTTTGCAAGCCAGACTGGGCATGTAGGGGCTTTATACTCTGCATTTCTTGCCATGCATAGGGCAGCTGGTGTCCCTGGTACTCTCGCAGCGCTTGCTTTAGGTTATAATACCAATCTTTTCGGTGCAATTACACACTATAGCAGTGGTCAAGCTGCTGTATACTATGGAGGTTTGTCCCTATCTATAACACGCCCGCCATATGATTTCTGTTTTTCTTTCCTGCGAATTAACTAA
Protein sequence

>MS.gene01191.t1

MESFALHSLSTTSSPTFFLHHHRSSRPIFRSQFSLPQNPSPRSIPSLKSSQSFSFPSKPSTFNLFSKLHFPIHANSTPPPSPSAPSKPNILQGAKPIPFVISILIGLTVRFFVPKPVEVTPQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTTSVVTKTLTFTAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEVLIAPAMPSTTARAGGVFLPIIKSLSLSAGSEPNSPSSKRLGAFLIQNQFQSAGNSSALFLTAAAQNLLCVKLAQELGVVISNPWVTWFKAASLPAFVCLLATPLILYTIYPPEIKDTPEAPALAAKKLETMGPVTQNEWVMVATMLLAVSLWIFGETLGIASAVAAMLGLSILLVLGVLDWDDCLNEKSAWDTLAWFAILVGMASQLTNLGIVSWMSDCVANSLRSFSLSWPASLAVLQAAYFFIHYLFASQTGHVGALYSAFLAMHRAAGVPGTLAALALGYNTNLFGAITHYSSGQAAVYYGGLSLSITRPPYDFCFSFLRIN