Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012073.t1 | XP_003629378.2 | 96.9 | 384 | 12 | 0 | 1 | 384 | 68 | 451 | 3.30E-215 | 757.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012073.t1 | Q9M066 | 63.6 | 390 | 132 | 6 | 1 | 383 | 98 | 484 | 8.0e-141 | 501.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012073.t1 | G7LD23 | 96.9 | 384 | 12 | 0 | 1 | 384 | 68 | 451 | 2.4e-215 | 757.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene012073 | MS.gene041156 | PPI |
MS.gene012073 | MS.gene010418 | PPI |
MS.gene012073 | MS.gene047694 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012073.t1 | MTR_8g076510 | 96.875 | 384 | 12 | 0 | 1 | 384 | 68 | 451 | 0.0 | 771 |
MS.gene012073.t1 | MTR_5g021220 | 71.859 | 398 | 98 | 3 | 1 | 384 | 65 | 462 | 0.0 | 588 |
MS.gene012073.t1 | MTR_8g016180 | 53.213 | 389 | 172 | 5 | 1 | 386 | 66 | 447 | 2.58e-146 | 427 |
MS.gene012073.t1 | MTR_8g016180 | 52.035 | 344 | 157 | 4 | 1 | 341 | 66 | 404 | 2.91e-124 | 369 |
MS.gene012073.t1 | MTR_5g082520 | 39.844 | 384 | 216 | 6 | 6 | 383 | 62 | 436 | 3.07e-98 | 304 |
MS.gene012073.t1 | MTR_3g070380 | 36.387 | 393 | 235 | 5 | 6 | 392 | 63 | 446 | 9.38e-91 | 285 |
MS.gene012073.t1 | MTR_8g077810 | 36.480 | 392 | 228 | 6 | 6 | 383 | 67 | 451 | 3.39e-89 | 281 |
MS.gene012073.t1 | MTR_5g020020 | 34.536 | 388 | 237 | 6 | 6 | 383 | 70 | 450 | 4.74e-87 | 275 |
MS.gene012073.t1 | MTR_7g033040 | 34.545 | 385 | 237 | 5 | 6 | 384 | 67 | 442 | 3.73e-78 | 252 |
MS.gene012073.t1 | MTR_5g010750 | 33.506 | 385 | 241 | 5 | 7 | 384 | 66 | 442 | 2.39e-77 | 249 |
MS.gene012073.t1 | MTR_5g010750 | 33.506 | 385 | 241 | 5 | 7 | 384 | 66 | 442 | 6.33e-77 | 249 |
MS.gene012073.t1 | MTR_6g069000 | 32.990 | 388 | 240 | 8 | 7 | 384 | 75 | 452 | 1.05e-75 | 245 |
MS.gene012073.t1 | MTR_6g069000 | 32.990 | 388 | 240 | 8 | 7 | 384 | 85 | 462 | 1.81e-75 | 244 |
MS.gene012073.t1 | MTR_7g016040 | 33.333 | 381 | 245 | 4 | 6 | 384 | 62 | 435 | 5.20e-75 | 243 |
MS.gene012073.t1 | MTR_6g015910 | 33.596 | 381 | 243 | 5 | 7 | 384 | 63 | 436 | 2.22e-74 | 242 |
MS.gene012073.t1 | MTR_3g007320 | 32.718 | 379 | 249 | 4 | 7 | 384 | 63 | 436 | 1.87e-73 | 239 |
MS.gene012073.t1 | MTR_8g072260 | 34.021 | 388 | 233 | 9 | 7 | 387 | 68 | 439 | 5.40e-67 | 222 |
MS.gene012073.t1 | MTR_5g020020 | 33.437 | 323 | 196 | 7 | 73 | 383 | 61 | 376 | 1.83e-66 | 219 |
MS.gene012073.t1 | MTR_8g072260 | 33.766 | 385 | 232 | 9 | 7 | 384 | 68 | 436 | 1.20e-65 | 219 |
MS.gene012073.t1 | MTR_5g025610 | 31.771 | 384 | 243 | 7 | 7 | 385 | 66 | 435 | 5.79e-60 | 203 |
MS.gene012073.t1 | MTR_0045s0060 | 32.095 | 377 | 242 | 9 | 11 | 384 | 1 | 366 | 2.55e-59 | 200 |
MS.gene012073.t1 | MTR_5g025610 | 31.593 | 383 | 243 | 7 | 7 | 384 | 66 | 434 | 4.30e-59 | 201 |
MS.gene012073.t1 | MTR_0045s0060 | 30.990 | 384 | 248 | 9 | 7 | 384 | 76 | 448 | 1.71e-58 | 200 |
MS.gene012073.t1 | MTR_8g089800 | 31.218 | 394 | 246 | 9 | 7 | 385 | 78 | 461 | 8.53e-58 | 199 |
MS.gene012073.t1 | MTR_2g031920 | 31.830 | 399 | 249 | 8 | 1 | 385 | 70 | 459 | 9.35e-58 | 199 |
MS.gene012073.t1 | MTR_6g034940 | 28.607 | 402 | 270 | 6 | 1 | 393 | 68 | 461 | 6.31e-57 | 196 |
MS.gene012073.t1 | MTR_4g086130 | 30.971 | 381 | 253 | 6 | 7 | 384 | 66 | 439 | 9.14e-56 | 193 |
MS.gene012073.t1 | MTR_0045s0070 | 30.287 | 383 | 252 | 8 | 7 | 384 | 76 | 448 | 6.30e-55 | 190 |
MS.gene012073.t1 | MTR_0045s0070 | 30.287 | 383 | 252 | 8 | 7 | 384 | 76 | 448 | 1.57e-54 | 190 |
MS.gene012073.t1 | MTR_2g031930 | 30.867 | 392 | 249 | 8 | 6 | 385 | 79 | 460 | 2.74e-54 | 189 |
MS.gene012073.t1 | MTR_5g092150 | 27.937 | 383 | 268 | 4 | 6 | 383 | 63 | 442 | 4.41e-54 | 188 |
MS.gene012073.t1 | MTR_2g031930 | 30.691 | 391 | 249 | 8 | 6 | 384 | 75 | 455 | 5.42e-54 | 188 |
MS.gene012073.t1 | MTR_1g019410 | 29.765 | 383 | 258 | 7 | 7 | 385 | 66 | 441 | 1.96e-53 | 187 |
MS.gene012073.t1 | MTR_3g112120 | 28.889 | 405 | 267 | 7 | 7 | 401 | 77 | 470 | 1.54e-52 | 185 |
MS.gene012073.t1 | MTR_8g072260 | 32.558 | 344 | 212 | 8 | 7 | 343 | 68 | 398 | 5.85e-51 | 180 |
MS.gene012073.t1 | MTR_4g086040 | 30.179 | 391 | 263 | 5 | 7 | 394 | 69 | 452 | 1.49e-50 | 179 |
MS.gene012073.t1 | MTR_7g016040 | 30.897 | 301 | 204 | 2 | 6 | 306 | 62 | 358 | 2.17e-49 | 173 |
MS.gene012073.t1 | MTR_1g037580 | 29.211 | 380 | 260 | 5 | 7 | 384 | 75 | 447 | 2.06e-48 | 173 |
MS.gene012073.t1 | MTR_8g100135 | 28.421 | 380 | 261 | 5 | 11 | 384 | 74 | 448 | 4.76e-48 | 172 |
MS.gene012073.t1 | MTR_5g091760 | 27.083 | 384 | 265 | 8 | 6 | 383 | 73 | 447 | 1.11e-47 | 171 |
MS.gene012073.t1 | MTR_8g012970 | 30.928 | 388 | 250 | 12 | 7 | 385 | 80 | 458 | 1.28e-46 | 169 |
MS.gene012073.t1 | MTR_5g014250 | 28.244 | 393 | 260 | 10 | 6 | 385 | 79 | 462 | 9.39e-45 | 164 |
MS.gene012073.t1 | MTR_4g005230 | 29.040 | 396 | 252 | 11 | 1 | 385 | 79 | 456 | 2.87e-44 | 162 |
MS.gene012073.t1 | MTR_5g025610 | 29.532 | 342 | 225 | 6 | 7 | 343 | 66 | 396 | 2.40e-43 | 158 |
MS.gene012073.t1 | MTR_8g076940 | 27.979 | 386 | 254 | 5 | 8 | 383 | 83 | 454 | 2.51e-43 | 160 |
MS.gene012073.t1 | MTR_0045s0080 | 29.499 | 339 | 221 | 7 | 7 | 340 | 76 | 401 | 2.80e-43 | 158 |
MS.gene012073.t1 | MTR_3g467130 | 28.718 | 390 | 257 | 9 | 6 | 383 | 67 | 447 | 3.33e-43 | 159 |
MS.gene012073.t1 | MTR_1g032950 | 27.595 | 395 | 247 | 10 | 2 | 385 | 80 | 446 | 1.55e-41 | 154 |
MS.gene012073.t1 | MTR_5g014240 | 28.608 | 395 | 256 | 11 | 6 | 385 | 78 | 461 | 3.97e-41 | 154 |
MS.gene012073.t1 | MTR_3g467140 | 26.943 | 386 | 263 | 7 | 6 | 380 | 67 | 444 | 1.15e-37 | 144 |
MS.gene012073.t1 | MTR_8g076940 | 27.616 | 344 | 228 | 4 | 8 | 341 | 83 | 415 | 2.34e-33 | 131 |
MS.gene012073.t1 | MTR_8g100135 | 25.962 | 312 | 222 | 4 | 11 | 316 | 74 | 382 | 3.95e-29 | 119 |
MS.gene012073.t1 | MTR_8g089190 | 20.813 | 418 | 264 | 9 | 3 | 384 | 29 | 415 | 3.00e-28 | 117 |
MS.gene012073.t1 | MTR_3g467140 | 27.599 | 279 | 184 | 6 | 112 | 380 | 41 | 311 | 5.93e-27 | 111 |
MS.gene012073.t1 | MTR_8g076940 | 26.403 | 303 | 220 | 3 | 8 | 309 | 83 | 383 | 4.91e-25 | 107 |
MS.gene012073.t1 | MTR_8g076940 | 26.537 | 309 | 206 | 4 | 8 | 306 | 83 | 380 | 6.82e-25 | 106 |
MS.gene012073.t1 | MTR_5g021390 | 23.716 | 409 | 275 | 13 | 7 | 383 | 74 | 477 | 4.78e-19 | 90.1 |
MS.gene012073.t1 | MTR_1g103670 | 28.837 | 215 | 144 | 4 | 172 | 383 | 253 | 461 | 3.03e-18 | 87.8 |
MS.gene012073.t1 | MTR_3g076560 | 29.327 | 208 | 141 | 3 | 176 | 380 | 272 | 476 | 4.23e-18 | 87.4 |
MS.gene012073.t1 | MTR_1g031700 | 27.313 | 227 | 158 | 4 | 161 | 383 | 238 | 461 | 1.51e-17 | 85.5 |
MS.gene012073.t1 | MTR_1g037370 | 27.354 | 223 | 149 | 5 | 168 | 383 | 242 | 458 | 2.09e-17 | 85.1 |
MS.gene012073.t1 | MTR_7g027960 | 24.038 | 416 | 274 | 13 | 3 | 383 | 58 | 466 | 6.64e-17 | 83.6 |
MS.gene012073.t1 | MTR_7g028020 | 23.798 | 416 | 275 | 13 | 3 | 383 | 58 | 466 | 8.08e-17 | 83.6 |
MS.gene012073.t1 | MTR_2g073480 | 28.063 | 253 | 164 | 8 | 139 | 383 | 135 | 377 | 8.39e-17 | 82.8 |
MS.gene012073.t1 | MTR_2g073440 | 28.063 | 253 | 164 | 8 | 139 | 383 | 202 | 444 | 1.15e-16 | 82.8 |
MS.gene012073.t1 | MTR_0457s0020 | 25.871 | 201 | 142 | 5 | 51 | 248 | 25 | 221 | 1.16e-16 | 79.3 |
MS.gene012073.t1 | MTR_0171s0010 | 26.357 | 258 | 167 | 6 | 131 | 368 | 205 | 459 | 1.18e-16 | 82.8 |
MS.gene012073.t1 | MTR_7g103450 | 28.889 | 225 | 147 | 5 | 168 | 383 | 261 | 481 | 1.18e-16 | 82.8 |
MS.gene012073.t1 | MTR_3g104560 | 23.856 | 306 | 197 | 8 | 101 | 393 | 96 | 378 | 1.37e-16 | 82.0 |
MS.gene012073.t1 | MTR_3g104560 | 23.856 | 306 | 197 | 8 | 101 | 393 | 231 | 513 | 2.27e-16 | 82.0 |
MS.gene012073.t1 | MTR_1g032980 | 23.396 | 265 | 188 | 7 | 6 | 260 | 50 | 309 | 2.30e-16 | 81.3 |
MS.gene012073.t1 | MTR_5g007460 | 28.636 | 220 | 139 | 5 | 172 | 383 | 231 | 440 | 2.57e-16 | 81.6 |
MS.gene012073.t1 | MTR_4g102310 | 25.561 | 223 | 156 | 4 | 168 | 383 | 250 | 469 | 3.31e-16 | 81.6 |
MS.gene012073.t1 | MTR_5g007450 | 26.512 | 215 | 148 | 4 | 172 | 383 | 254 | 461 | 4.09e-16 | 81.3 |
MS.gene012073.t1 | MTR_2g073420 | 28.216 | 241 | 155 | 8 | 167 | 399 | 254 | 484 | 5.06e-16 | 80.9 |
MS.gene012073.t1 | MTR_5g007550 | 26.512 | 215 | 148 | 4 | 172 | 383 | 254 | 461 | 9.45e-16 | 80.1 |
MS.gene012073.t1 | MTR_5g072980 | 25.100 | 251 | 176 | 6 | 139 | 383 | 222 | 466 | 1.28e-15 | 79.7 |
MS.gene012073.t1 | MTR_5g072930 | 25.100 | 251 | 176 | 6 | 139 | 383 | 222 | 466 | 1.28e-15 | 79.7 |
MS.gene012073.t1 | MTR_0171s0020 | 26.047 | 215 | 142 | 4 | 167 | 368 | 247 | 457 | 1.53e-15 | 79.3 |
MS.gene012073.t1 | MTR_5g014230 | 50.000 | 62 | 29 | 1 | 324 | 385 | 1 | 60 | 1.64e-15 | 72.8 |
MS.gene012073.t1 | MTR_0181s0030 | 27.273 | 231 | 153 | 5 | 148 | 368 | 226 | 451 | 1.67e-15 | 79.3 |
MS.gene012073.t1 | MTR_5g073020 | 26.396 | 197 | 139 | 3 | 190 | 383 | 273 | 466 | 3.03e-15 | 78.6 |
MS.gene012073.t1 | MTR_1g103680 | 29.302 | 215 | 143 | 4 | 172 | 383 | 254 | 462 | 3.35e-15 | 78.2 |
MS.gene012073.t1 | MTR_8g089190 | 18.605 | 344 | 224 | 7 | 3 | 315 | 29 | 347 | 5.67e-15 | 76.6 |
MS.gene012073.t1 | MTR_7g012330 | 26.695 | 236 | 163 | 4 | 153 | 383 | 233 | 463 | 7.39e-15 | 77.4 |
MS.gene012073.t1 | MTR_8g468780 | 25.806 | 217 | 145 | 4 | 164 | 368 | 175 | 387 | 9.48e-15 | 76.6 |
MS.gene012073.t1 | MTR_4g088420 | 25.568 | 176 | 119 | 4 | 211 | 377 | 22 | 194 | 1.09e-14 | 73.9 |
MS.gene012073.t1 | MTR_0171s0030 | 25.121 | 207 | 147 | 3 | 167 | 368 | 166 | 369 | 1.34e-14 | 76.3 |
MS.gene012073.t1 | MTR_4g095050 | 26.236 | 263 | 166 | 9 | 138 | 383 | 210 | 461 | 1.58e-14 | 76.3 |
MS.gene012073.t1 | MTR_8g020940 | 27.451 | 204 | 140 | 4 | 169 | 368 | 254 | 453 | 1.68e-14 | 76.3 |
MS.gene012073.t1 | MTR_3g020780 | 27.907 | 215 | 143 | 3 | 178 | 386 | 267 | 475 | 2.30e-14 | 75.9 |
MS.gene012073.t1 | MTR_1g097240 | 30.455 | 220 | 133 | 7 | 171 | 377 | 246 | 458 | 2.97e-14 | 75.5 |
MS.gene012073.t1 | MTR_2g010330 | 31.395 | 172 | 111 | 3 | 219 | 383 | 303 | 474 | 2.99e-14 | 75.5 |
MS.gene012073.t1 | MTR_1g015860 | 22.408 | 299 | 196 | 8 | 98 | 383 | 220 | 495 | 3.28e-14 | 75.5 |
MS.gene012073.t1 | MTR_1g055325 | 26.638 | 229 | 156 | 5 | 162 | 383 | 259 | 482 | 3.47e-14 | 75.1 |
MS.gene012073.t1 | MTR_8g036185 | 25.234 | 321 | 199 | 11 | 86 | 368 | 150 | 467 | 4.54e-14 | 74.7 |
MS.gene012073.t1 | MTR_7g012860 | 25.424 | 236 | 168 | 4 | 153 | 383 | 232 | 464 | 6.35e-14 | 74.3 |
MS.gene012073.t1 | MTR_0287s0060 | 25.424 | 236 | 168 | 4 | 153 | 383 | 232 | 464 | 6.35e-14 | 74.3 |
MS.gene012073.t1 | MTR_1g023730 | 24.887 | 221 | 154 | 4 | 172 | 383 | 258 | 475 | 7.96e-14 | 73.9 |
MS.gene012073.t1 | MTR_4g026030 | 27.727 | 220 | 142 | 7 | 174 | 383 | 96 | 308 | 1.88e-13 | 72.0 |
MS.gene012073.t1 | MTR_4g088170 | 24.359 | 234 | 158 | 5 | 167 | 385 | 245 | 474 | 2.75e-13 | 72.4 |
MS.gene012073.t1 | MTR_4g088160 | 21.687 | 415 | 281 | 15 | 7 | 385 | 66 | 472 | 2.92e-13 | 72.4 |
MS.gene012073.t1 | MTR_0451s0010 | 26.496 | 234 | 152 | 7 | 161 | 377 | 54 | 284 | 3.01e-13 | 71.2 |
MS.gene012073.t1 | MTR_4g026050 | 27.064 | 218 | 146 | 6 | 174 | 383 | 248 | 460 | 3.57e-13 | 72.0 |
MS.gene012073.t1 | MTR_4g088195 | 24.242 | 231 | 160 | 6 | 167 | 385 | 245 | 472 | 3.84e-13 | 72.0 |
MS.gene012073.t1 | MTR_8g020960 | 20.611 | 393 | 277 | 9 | 7 | 368 | 67 | 455 | 4.67e-13 | 71.6 |
MS.gene012073.t1 | MTR_8g046240 | 27.848 | 237 | 159 | 8 | 154 | 383 | 239 | 470 | 5.14e-13 | 71.6 |
MS.gene012073.t1 | MTR_3g058210 | 26.407 | 231 | 152 | 5 | 164 | 379 | 240 | 467 | 5.51e-13 | 71.2 |
MS.gene012073.t1 | MTR_8g469300 | 25.000 | 216 | 148 | 3 | 164 | 368 | 244 | 456 | 5.96e-13 | 71.2 |
MS.gene012073.t1 | MTR_4g071710 | 22.811 | 434 | 279 | 17 | 1 | 392 | 61 | 480 | 6.36e-13 | 71.2 |
MS.gene012073.t1 | MTR_4g062500 | 24.324 | 259 | 162 | 6 | 135 | 383 | 242 | 476 | 9.61e-13 | 70.9 |
MS.gene012073.t1 | MTR_4g018800 | 29.148 | 223 | 136 | 10 | 166 | 377 | 276 | 487 | 1.45e-12 | 70.1 |
MS.gene012073.t1 | MTR_3g077460 | 27.632 | 228 | 142 | 6 | 157 | 380 | 174 | 382 | 1.57e-12 | 69.3 |
MS.gene012073.t1 | MTR_4g088405 | 32.773 | 119 | 69 | 4 | 269 | 377 | 279 | 396 | 2.78e-12 | 68.9 |
MS.gene012073.t1 | MTR_5g016440 | 25.571 | 219 | 154 | 5 | 167 | 383 | 243 | 454 | 2.84e-12 | 68.9 |
MS.gene012073.t1 | MTR_3g076530 | 25.463 | 216 | 153 | 5 | 172 | 383 | 256 | 467 | 2.90e-12 | 69.3 |
MS.gene012073.t1 | MTR_1g023720 | 24.434 | 221 | 155 | 4 | 172 | 383 | 258 | 475 | 2.98e-12 | 68.9 |
MS.gene012073.t1 | MTR_5g095220 | 24.036 | 337 | 214 | 8 | 102 | 422 | 145 | 455 | 3.18e-12 | 68.9 |
MS.gene012073.t1 | MTR_4g133750 | 26.860 | 242 | 161 | 5 | 151 | 379 | 229 | 467 | 3.21e-12 | 68.9 |
MS.gene012073.t1 | MTR_1g116890 | 27.434 | 226 | 151 | 6 | 167 | 383 | 250 | 471 | 3.64e-12 | 68.9 |
MS.gene012073.t1 | MTR_4g088425 | 25.279 | 269 | 175 | 9 | 130 | 377 | 203 | 466 | 3.89e-12 | 68.6 |
MS.gene012073.t1 | MTR_8g076290 | 24.887 | 221 | 146 | 4 | 163 | 366 | 235 | 452 | 4.32e-12 | 68.6 |
MS.gene012073.t1 | MTR_6g008620 | 28.507 | 221 | 127 | 9 | 174 | 377 | 281 | 487 | 5.22e-12 | 68.6 |
MS.gene012073.t1 | MTR_5g023680 | 25.000 | 216 | 153 | 4 | 174 | 383 | 224 | 436 | 5.28e-12 | 68.2 |
MS.gene012073.t1 | MTR_3g057980 | 27.888 | 251 | 143 | 12 | 155 | 379 | 222 | 460 | 5.45e-12 | 68.2 |
MS.gene012073.t1 | MTR_1g035140 | 26.244 | 221 | 147 | 5 | 172 | 379 | 247 | 464 | 5.53e-12 | 68.2 |
MS.gene012073.t1 | MTR_4g078110 | 25.833 | 240 | 155 | 8 | 156 | 383 | 213 | 441 | 5.70e-12 | 68.2 |
MS.gene012073.t1 | MTR_0059s0170 | 25.373 | 201 | 138 | 5 | 188 | 379 | 269 | 466 | 6.39e-12 | 68.2 |
MS.gene012073.t1 | MTR_1g107295 | 26.263 | 198 | 138 | 4 | 190 | 383 | 285 | 478 | 7.72e-12 | 67.8 |
MS.gene012073.t1 | MTR_3g057900 | 26.991 | 226 | 136 | 8 | 172 | 379 | 247 | 461 | 8.79e-12 | 67.8 |
MS.gene012073.t1 | MTR_6g042540 | 29.353 | 201 | 127 | 7 | 188 | 377 | 284 | 480 | 9.25e-12 | 67.4 |
MS.gene012073.t1 | MTR_6g035100 | 25.556 | 270 | 179 | 4 | 120 | 379 | 206 | 463 | 1.12e-11 | 67.4 |
MS.gene012073.t1 | MTR_3g025230 | 29.545 | 176 | 109 | 6 | 201 | 368 | 287 | 455 | 1.92e-11 | 66.6 |
MS.gene012073.t1 | MTR_3g057970 | 26.047 | 215 | 139 | 7 | 174 | 379 | 252 | 455 | 2.85e-11 | 65.9 |
MS.gene012073.t1 | MTR_1g023700 | 23.982 | 221 | 156 | 4 | 172 | 383 | 259 | 476 | 3.17e-11 | 65.9 |
MS.gene012073.t1 | MTR_0638s0020 | 23.636 | 220 | 161 | 4 | 167 | 383 | 178 | 393 | 4.07e-11 | 65.1 |
MS.gene012073.t1 | MTR_4g062510 | 24.257 | 202 | 140 | 3 | 190 | 383 | 284 | 480 | 4.42e-11 | 65.5 |
MS.gene012073.t1 | MTR_3g058390 | 28.293 | 205 | 137 | 5 | 182 | 379 | 264 | 465 | 5.34e-11 | 65.1 |
MS.gene012073.t1 | MTR_8g080520 | 24.464 | 233 | 149 | 8 | 164 | 383 | 275 | 493 | 5.85e-11 | 65.1 |
MS.gene012073.t1 | MTR_3g024520 | 28.409 | 176 | 111 | 6 | 201 | 368 | 287 | 455 | 6.19e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012073.t1 | AT4G36380 | 63.590 | 390 | 132 | 6 | 1 | 383 | 98 | 484 | 7.85e-179 | 512 |
MS.gene012073.t1 | AT3G13730 | 52.727 | 385 | 167 | 7 | 8 | 384 | 87 | 464 | 3.94e-144 | 421 |
MS.gene012073.t1 | AT3G13730 | 52.727 | 385 | 167 | 7 | 8 | 384 | 87 | 464 | 2.26e-143 | 420 |
MS.gene012073.t1 | AT4G36380 | 62.821 | 312 | 107 | 5 | 1 | 306 | 98 | 406 | 3.96e-134 | 394 |
MS.gene012073.t1 | AT5G05690 | 40.682 | 381 | 217 | 4 | 6 | 383 | 65 | 439 | 5.54e-96 | 298 |
MS.gene012073.t1 | AT3G50660 | 34.375 | 416 | 240 | 7 | 1 | 383 | 68 | 483 | 1.98e-84 | 270 |
MS.gene012073.t1 | AT1G73340 | 34.367 | 387 | 233 | 6 | 7 | 384 | 78 | 452 | 1.60e-80 | 258 |
MS.gene012073.t1 | AT5G05690 | 38.235 | 340 | 202 | 3 | 6 | 343 | 65 | 398 | 7.02e-78 | 249 |
MS.gene012073.t1 | AT5G05690 | 39.877 | 326 | 187 | 4 | 61 | 383 | 1 | 320 | 6.51e-77 | 245 |
MS.gene012073.t1 | AT1G12740 | 32.987 | 385 | 243 | 5 | 7 | 384 | 72 | 448 | 8.20e-73 | 238 |
MS.gene012073.t1 | AT1G12740 | 32.727 | 385 | 244 | 5 | 7 | 384 | 66 | 442 | 2.28e-72 | 237 |
MS.gene012073.t1 | AT3G50660 | 33.607 | 366 | 220 | 6 | 1 | 343 | 68 | 433 | 1.90e-71 | 233 |
MS.gene012073.t1 | AT5G38970 | 32.718 | 379 | 249 | 5 | 7 | 384 | 64 | 437 | 3.23e-71 | 234 |
MS.gene012073.t1 | AT4G19230 | 33.508 | 382 | 237 | 7 | 7 | 385 | 67 | 434 | 5.28e-70 | 231 |
MS.gene012073.t1 | AT1G12740 | 32.225 | 391 | 244 | 6 | 7 | 384 | 66 | 448 | 8.85e-70 | 230 |
MS.gene012073.t1 | AT4G19230 | 33.421 | 380 | 236 | 7 | 7 | 383 | 67 | 432 | 2.86e-69 | 228 |
MS.gene012073.t1 | AT5G14400 | 34.447 | 389 | 217 | 8 | 6 | 385 | 30 | 389 | 4.54e-68 | 223 |
MS.gene012073.t1 | AT5G45340 | 31.969 | 391 | 247 | 7 | 7 | 393 | 67 | 442 | 1.05e-67 | 224 |
MS.gene012073.t1 | AT5G14400 | 34.536 | 388 | 216 | 8 | 6 | 384 | 30 | 388 | 1.87e-67 | 223 |
MS.gene012073.t1 | AT5G45340 | 32.199 | 382 | 240 | 7 | 7 | 384 | 67 | 433 | 1.61e-66 | 221 |
MS.gene012073.t1 | AT5G38970 | 32.222 | 360 | 238 | 5 | 26 | 384 | 2 | 356 | 2.04e-65 | 216 |
MS.gene012073.t1 | AT5G38970 | 32.222 | 360 | 238 | 5 | 26 | 384 | 2 | 356 | 2.04e-65 | 216 |
MS.gene012073.t1 | AT3G30180 | 30.958 | 407 | 267 | 8 | 7 | 410 | 64 | 459 | 3.91e-65 | 218 |
MS.gene012073.t1 | AT1G55940 | 32.274 | 409 | 261 | 10 | 9 | 407 | 83 | 485 | 3.83e-63 | 213 |
MS.gene012073.t1 | AT1G55940 | 32.727 | 385 | 245 | 9 | 9 | 383 | 83 | 463 | 7.07e-62 | 209 |
MS.gene012073.t1 | AT3G19270 | 31.186 | 388 | 254 | 8 | 7 | 390 | 65 | 443 | 1.30e-58 | 200 |
MS.gene012073.t1 | AT5G48000 | 29.500 | 400 | 257 | 10 | 7 | 394 | 70 | 456 | 1.42e-58 | 201 |
MS.gene012073.t1 | AT5G48000 | 29.500 | 400 | 257 | 10 | 7 | 394 | 70 | 456 | 1.42e-58 | 201 |
MS.gene012073.t1 | AT5G48000 | 29.500 | 400 | 257 | 10 | 7 | 394 | 70 | 456 | 1.42e-58 | 201 |
MS.gene012073.t1 | AT5G48000 | 29.500 | 400 | 257 | 10 | 7 | 394 | 70 | 456 | 1.42e-58 | 201 |
MS.gene012073.t1 | AT5G48000 | 29.500 | 400 | 257 | 10 | 7 | 394 | 70 | 456 | 1.42e-58 | 201 |
MS.gene012073.t1 | AT5G48000 | 29.500 | 400 | 257 | 10 | 7 | 394 | 70 | 456 | 1.42e-58 | 201 |
MS.gene012073.t1 | AT1G19630 | 30.526 | 380 | 259 | 4 | 7 | 385 | 71 | 446 | 3.03e-58 | 199 |
MS.gene012073.t1 | AT5G14400 | 33.791 | 364 | 197 | 9 | 33 | 384 | 3 | 334 | 4.14e-58 | 196 |
MS.gene012073.t1 | AT3G19270 | 31.675 | 382 | 248 | 8 | 7 | 384 | 65 | 437 | 4.61e-58 | 199 |
MS.gene012073.t1 | AT5G48000 | 29.500 | 400 | 257 | 10 | 7 | 394 | 111 | 497 | 4.76e-58 | 200 |
MS.gene012073.t1 | AT1G19630 | 30.607 | 379 | 258 | 4 | 7 | 384 | 71 | 445 | 6.86e-58 | 199 |
MS.gene012073.t1 | AT3G44970 | 32.732 | 388 | 244 | 7 | 7 | 385 | 70 | 449 | 2.28e-57 | 197 |
MS.gene012073.t1 | AT5G38970 | 29.851 | 335 | 230 | 4 | 7 | 340 | 64 | 394 | 3.55e-54 | 187 |
MS.gene012073.t1 | AT4G15396 | 30.155 | 388 | 257 | 9 | 7 | 389 | 70 | 448 | 2.00e-53 | 186 |
MS.gene012073.t1 | AT4G15396 | 30.287 | 383 | 253 | 9 | 7 | 384 | 70 | 443 | 2.82e-52 | 184 |
MS.gene012073.t1 | AT2G29090 | 28.646 | 384 | 260 | 7 | 6 | 384 | 79 | 453 | 5.61e-52 | 183 |
MS.gene012073.t1 | AT2G29090 | 28.646 | 384 | 260 | 7 | 6 | 384 | 79 | 453 | 5.61e-52 | 183 |
MS.gene012073.t1 | AT4G15393 | 29.517 | 393 | 257 | 10 | 7 | 393 | 70 | 448 | 1.21e-50 | 179 |
MS.gene012073.t1 | AT4G15300 | 28.457 | 376 | 259 | 6 | 7 | 379 | 60 | 428 | 4.53e-50 | 177 |
MS.gene012073.t1 | AT2G32440 | 29.008 | 393 | 255 | 9 | 6 | 385 | 78 | 459 | 4.96e-50 | 178 |
MS.gene012073.t1 | AT2G32440 | 29.008 | 393 | 255 | 9 | 6 | 385 | 78 | 459 | 4.96e-50 | 178 |
MS.gene012073.t1 | AT4G15300 | 28.457 | 376 | 259 | 6 | 7 | 379 | 70 | 438 | 6.72e-50 | 177 |
MS.gene012073.t1 | AT1G78490 | 29.319 | 382 | 261 | 7 | 7 | 383 | 70 | 447 | 1.64e-49 | 176 |
MS.gene012073.t1 | AT3G30290 | 31.316 | 380 | 233 | 12 | 12 | 379 | 5 | 368 | 7.36e-49 | 173 |
MS.gene012073.t1 | AT5G14400 | 33.226 | 310 | 189 | 6 | 6 | 306 | 30 | 330 | 3.00e-48 | 169 |
MS.gene012073.t1 | AT1G05160 | 28.827 | 392 | 257 | 10 | 7 | 385 | 80 | 462 | 3.79e-48 | 173 |
MS.gene012073.t1 | AT1G05160 | 28.827 | 392 | 257 | 10 | 7 | 385 | 80 | 462 | 3.79e-48 | 173 |
MS.gene012073.t1 | AT1G65670 | 28.982 | 383 | 244 | 10 | 7 | 379 | 70 | 434 | 1.31e-47 | 171 |
MS.gene012073.t1 | AT1G12740 | 30.619 | 307 | 198 | 5 | 7 | 306 | 66 | 364 | 2.86e-47 | 167 |
MS.gene012073.t1 | AT5G36110 | 27.177 | 379 | 262 | 5 | 11 | 384 | 77 | 446 | 1.42e-46 | 168 |
MS.gene012073.t1 | AT1G19630 | 29.167 | 336 | 236 | 2 | 7 | 341 | 71 | 405 | 1.73e-46 | 167 |
MS.gene012073.t1 | AT2G29090 | 27.945 | 365 | 249 | 7 | 25 | 384 | 3 | 358 | 3.01e-46 | 165 |
MS.gene012073.t1 | AT4G15396 | 28.721 | 383 | 238 | 9 | 7 | 384 | 70 | 422 | 9.90e-45 | 163 |
MS.gene012073.t1 | AT4G15300 | 26.873 | 387 | 259 | 7 | 10 | 379 | 71 | 450 | 3.91e-44 | 162 |
MS.gene012073.t1 | AT2G42850 | 26.943 | 386 | 260 | 6 | 7 | 383 | 81 | 453 | 5.19e-42 | 156 |
MS.gene012073.t1 | AT4G15396 | 29.032 | 341 | 230 | 7 | 7 | 343 | 70 | 402 | 4.59e-41 | 152 |
MS.gene012073.t1 | AT4G15393 | 28.529 | 340 | 227 | 8 | 7 | 341 | 70 | 398 | 1.17e-38 | 145 |
MS.gene012073.t1 | AT4G15310 | 27.441 | 379 | 262 | 9 | 6 | 379 | 71 | 441 | 2.59e-37 | 143 |
MS.gene012073.t1 | AT1G78490 | 26.765 | 340 | 240 | 7 | 7 | 341 | 70 | 405 | 4.66e-35 | 135 |
MS.gene012073.t1 | AT4G15393 | 27.434 | 339 | 199 | 10 | 7 | 341 | 70 | 365 | 7.18e-28 | 114 |
MS.gene012073.t1 | AT5G36110 | 24.839 | 310 | 221 | 4 | 11 | 315 | 77 | 379 | 2.94e-27 | 113 |
MS.gene012073.t1 | AT2G42850 | 25.080 | 311 | 228 | 3 | 7 | 315 | 81 | 388 | 2.85e-26 | 110 |
MS.gene012073.t1 | AT5G36130 | 36.036 | 111 | 69 | 1 | 274 | 384 | 1 | 109 | 2.45e-20 | 87.8 |
MS.gene012073.t1 | AT1G33730 | 29.958 | 237 | 144 | 7 | 162 | 383 | 106 | 335 | 3.95e-19 | 89.4 |
MS.gene012073.t1 | AT1G33730 | 29.958 | 237 | 144 | 7 | 162 | 383 | 106 | 335 | 3.95e-19 | 89.4 |
MS.gene012073.t1 | AT2G29090 | 24.111 | 253 | 182 | 5 | 6 | 254 | 79 | 325 | 4.74e-19 | 89.0 |
MS.gene012073.t1 | AT2G45580 | 26.749 | 243 | 161 | 6 | 152 | 383 | 82 | 318 | 7.25e-19 | 88.6 |
MS.gene012073.t1 | AT2G45580 | 26.749 | 243 | 161 | 6 | 152 | 383 | 236 | 472 | 2.30e-18 | 88.2 |
MS.gene012073.t1 | AT2G45550 | 24.217 | 351 | 222 | 14 | 65 | 383 | 133 | 471 | 1.69e-17 | 85.5 |
MS.gene012073.t1 | AT3G44970 | 25.168 | 298 | 206 | 7 | 7 | 295 | 70 | 359 | 3.31e-17 | 83.6 |
MS.gene012073.t1 | AT1G33720 | 27.103 | 214 | 146 | 5 | 175 | 383 | 131 | 339 | 1.71e-16 | 81.6 |
MS.gene012073.t1 | AT1G33720 | 27.103 | 214 | 146 | 5 | 175 | 383 | 131 | 339 | 1.71e-16 | 81.6 |
MS.gene012073.t1 | AT1G33720 | 27.103 | 214 | 146 | 5 | 175 | 383 | 131 | 339 | 1.71e-16 | 81.6 |
MS.gene012073.t1 | AT5G36140 | 25.000 | 252 | 167 | 5 | 10 | 251 | 72 | 311 | 2.37e-16 | 80.5 |
MS.gene012073.t1 | AT1G33720 | 27.315 | 216 | 143 | 6 | 175 | 383 | 263 | 471 | 3.26e-16 | 81.6 |
MS.gene012073.t1 | AT2G45560 | 25.991 | 227 | 152 | 5 | 167 | 383 | 251 | 471 | 3.84e-16 | 81.3 |
MS.gene012073.t1 | AT3G32047 | 26.697 | 221 | 150 | 4 | 156 | 368 | 241 | 457 | 5.19e-16 | 80.9 |
MS.gene012073.t1 | AT4G37410 | 26.582 | 237 | 160 | 8 | 152 | 383 | 229 | 456 | 5.97e-16 | 80.9 |
MS.gene012073.t1 | AT5G06900 | 26.522 | 230 | 163 | 3 | 159 | 385 | 237 | 463 | 6.76e-16 | 80.5 |
MS.gene012073.t1 | AT4G37430 | 29.218 | 243 | 151 | 10 | 150 | 383 | 229 | 459 | 1.78e-15 | 79.3 |
MS.gene012073.t1 | AT5G25120 | 23.565 | 331 | 218 | 10 | 82 | 383 | 133 | 457 | 3.32e-15 | 78.2 |
MS.gene012073.t1 | AT4G15360 | 26.293 | 232 | 155 | 4 | 152 | 370 | 231 | 459 | 5.75e-15 | 77.8 |
MS.gene012073.t1 | AT5G44620 | 24.889 | 225 | 155 | 5 | 164 | 377 | 255 | 476 | 1.67e-14 | 76.3 |
MS.gene012073.t1 | AT4G37310 | 24.172 | 302 | 194 | 12 | 111 | 383 | 172 | 467 | 3.53e-14 | 75.1 |
MS.gene012073.t1 | AT4G37400 | 27.311 | 238 | 159 | 7 | 152 | 383 | 227 | 456 | 3.74e-14 | 75.1 |
MS.gene012073.t1 | AT5G04330 | 24.275 | 276 | 170 | 9 | 164 | 423 | 238 | 490 | 1.94e-13 | 72.8 |
MS.gene012073.t1 | AT5G10610 | 29.741 | 232 | 148 | 8 | 160 | 383 | 233 | 457 | 2.36e-13 | 72.4 |
MS.gene012073.t1 | AT5G67310 | 24.068 | 295 | 195 | 9 | 108 | 383 | 182 | 466 | 2.40e-13 | 72.4 |
MS.gene012073.t1 | AT4G37320 | 27.064 | 218 | 147 | 7 | 168 | 383 | 248 | 455 | 2.59e-13 | 72.4 |
MS.gene012073.t1 | AT2G26170 | 24.576 | 236 | 170 | 5 | 153 | 383 | 173 | 405 | 2.74e-13 | 72.0 |
MS.gene012073.t1 | AT2G26170 | 24.576 | 236 | 170 | 5 | 153 | 383 | 256 | 488 | 3.85e-13 | 72.0 |
MS.gene012073.t1 | AT4G13770 | 25.877 | 228 | 156 | 6 | 167 | 385 | 242 | 465 | 3.89e-13 | 72.0 |
MS.gene012073.t1 | AT1G33720 | 25.316 | 237 | 146 | 6 | 175 | 383 | 131 | 364 | 4.32e-13 | 71.2 |
MS.gene012073.t1 | AT5G25130 | 32.515 | 163 | 104 | 3 | 224 | 383 | 298 | 457 | 6.13e-13 | 71.2 |
MS.gene012073.t1 | AT3G20950 | 25.000 | 228 | 158 | 5 | 151 | 368 | 240 | 464 | 9.81e-13 | 70.9 |
MS.gene012073.t1 | AT4G36220 | 27.684 | 177 | 118 | 3 | 212 | 383 | 308 | 479 | 1.13e-12 | 70.5 |
MS.gene012073.t1 | AT5G25140 | 27.000 | 200 | 138 | 5 | 189 | 383 | 261 | 457 | 1.25e-12 | 70.5 |
MS.gene012073.t1 | AT2G42250 | 26.794 | 209 | 140 | 3 | 185 | 383 | 272 | 477 | 2.76e-12 | 69.3 |
MS.gene012073.t1 | AT5G10600 | 27.273 | 231 | 155 | 6 | 160 | 383 | 249 | 473 | 5.51e-12 | 68.2 |
MS.gene012073.t1 | AT4G31940 | 25.455 | 275 | 172 | 11 | 131 | 377 | 213 | 482 | 7.10e-12 | 68.2 |
MS.gene012073.t1 | AT3G26270 | 27.854 | 219 | 132 | 7 | 176 | 376 | 256 | 466 | 8.84e-12 | 67.8 |
MS.gene012073.t1 | AT2G26710 | 25.194 | 258 | 155 | 8 | 154 | 384 | 247 | 493 | 1.07e-11 | 67.4 |
MS.gene012073.t1 | AT4G37370 | 23.744 | 219 | 155 | 6 | 164 | 380 | 243 | 451 | 2.57e-11 | 66.2 |
MS.gene012073.t1 | AT2G14100 | 25.116 | 215 | 150 | 4 | 161 | 368 | 249 | 459 | 3.39e-11 | 65.9 |
MS.gene012073.t1 | AT3G20960 | 26.941 | 219 | 141 | 7 | 168 | 376 | 151 | 360 | 3.66e-11 | 65.5 |
MS.gene012073.t1 | AT4G15350 | 21.535 | 404 | 268 | 10 | 3 | 368 | 62 | 454 | 4.50e-11 | 65.5 |
MS.gene012073.t1 | AT3G20140 | 23.529 | 238 | 161 | 6 | 143 | 368 | 228 | 456 | 4.59e-11 | 65.5 |
MS.gene012073.t1 | AT1G50560 | 24.066 | 241 | 170 | 4 | 153 | 383 | 242 | 479 | 8.18e-11 | 64.7 |
MS.gene012073.t1 | AT4G37360 | 23.874 | 222 | 158 | 5 | 164 | 383 | 243 | 455 | 9.09e-11 | 64.3 |
MS.gene012073.t1 | AT5G42580 | 22.302 | 278 | 172 | 5 | 116 | 383 | 217 | 460 | 9.33e-11 | 64.3 |
Find 96 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAGATTACGTTTACTATTT+TGG | 0.118268 | 8.2:-28959568 | MS.gene012073:intron |
ATTAGTTCTCGAATTGATTT+TGG | 0.145295 | 8.2:+28961243 | None:intergenic |
TGACAATATTTGCCATTCTA+AGG | 0.190733 | 8.2:+28954585 | None:intergenic |
GAATTTGAAGAGTTCATAAA+AGG | 0.201528 | 8.2:-28959492 | MS.gene012073:CDS |
TCTTGTTCCTGGTAACTTAA+TGG | 0.202588 | 8.2:+28959455 | None:intergenic |
ATCATCTAGTTACAACTTAC+AGG | 0.248805 | 8.2:-28953935 | MS.gene012073:intron |
CTTACATCCGTTCATTTAGA+TGG | 0.274846 | 8.2:-28954388 | MS.gene012073:CDS |
AAACTATGAAGCAAACGATA+TGG | 0.284517 | 8.2:-28951849 | MS.gene012073:CDS |
ATCAAAGATGTAGATATTAA+AGG | 0.303928 | 8.2:-28954542 | MS.gene012073:intron |
CTTGTTCCTGGTAACTTAAT+GGG | 0.305870 | 8.2:+28959456 | None:intergenic |
TATATGGATATTTACCTTGA+TGG | 0.306808 | 8.2:+28964702 | None:intergenic |
TTCTGCTATAAACAAATTGA+TGG | 0.316051 | 8.2:-28951884 | MS.gene012073:CDS |
AAAATCAATTCGAGAACTAA+TGG | 0.318034 | 8.2:-28961241 | MS.gene012073:CDS |
ACTTGATCTTGAACATATAT+TGG | 0.322749 | 8.2:+28961066 | None:intergenic |
AGAGGAAAGGAATGATAATA+AGG | 0.339306 | 8.2:-28959256 | MS.gene012073:CDS |
TGTGTTTAAGACGAGCATTT+TGG | 0.345803 | 8.2:-28961349 | MS.gene012073:CDS |
CACACCAATCCTTAGGAATT+AGG | 0.351111 | 8.2:+28954422 | None:intergenic |
CCAACACAATCCCTAATATA+TGG | 0.356179 | 8.2:-28959182 | MS.gene012073:CDS |
AGAATCACCTTGTTCACATC+TGG | 0.366708 | 8.2:+28961300 | None:intergenic |
CAAATATTGTCAATGCCATT+TGG | 0.368241 | 8.2:-28954574 | MS.gene012073:CDS |
GATTTATATAGTCTTGTTCC+TGG | 0.383888 | 8.2:+28959444 | None:intergenic |
TCAAACAATGTTTAGCTACT+TGG | 0.417846 | 8.2:-28961098 | MS.gene012073:CDS |
ACTCTATACTTCAAATGAAC+GGG | 0.427571 | 8.2:-28961212 | MS.gene012073:CDS |
TGTTCAAGATCAAGTCAAAA+AGG | 0.428891 | 8.2:-28961058 | MS.gene012073:intron |
TGGAGGAATTATAACCTTCA+AGG | 0.443755 | 8.2:+28959422 | None:intergenic |
TGATTCGAGCTTTGAATTGT+GGG | 0.449746 | 8.2:+28961142 | None:intergenic |
GAGAGATGAAATTGATAGCT+TGG | 0.456514 | 8.2:-28951962 | MS.gene012073:CDS |
AACTATGAAGCAAACGATAT+GGG | 0.463264 | 8.2:-28951848 | MS.gene012073:CDS |
ATCATTGAGATGATGATTCC+TGG | 0.467878 | 8.2:-28959138 | MS.gene012073:CDS |
AAGACTATATAAATCCTTGA+AGG | 0.472023 | 8.2:-28959436 | MS.gene012073:intron |
GATAGTGCAGAGGATAATAG+AGG | 0.474111 | 8.2:-28959274 | MS.gene012073:CDS |
AAATCAATTCGAGAACTAAT+GGG | 0.474394 | 8.2:-28961240 | MS.gene012073:CDS |
AGAAAACTTCATGCACTCCT+AGG | 0.474567 | 8.2:-28961180 | MS.gene012073:CDS |
TCTTGCTCTATCCAAATTAG+TGG | 0.475778 | 8.2:-28959058 | MS.gene012073:intron |
GACAATATTTGCCATTCTAA+GGG | 0.478453 | 8.2:+28954586 | None:intergenic |
AATTTGAAGAGTTCATAAAA+GGG | 0.483424 | 8.2:-28959491 | MS.gene012073:CDS |
CTCCATGGATCAAACTCTAA+AGG | 0.488330 | 8.2:+28954349 | None:intergenic |
CTTGTTCACATCTGGGTCTG+TGG | 0.489477 | 8.2:+28961308 | None:intergenic |
GTGATTCGAGCTTTGAATTG+TGG | 0.493021 | 8.2:+28961141 | None:intergenic |
CACTCTATACTTCAAATGAA+CGG | 0.501035 | 8.2:-28961213 | MS.gene012073:CDS |
CTTTGAATTGTGGGGATCGT+AGG | 0.509307 | 8.2:+28961151 | None:intergenic |
TGCTTGCCCATTAAGTTACC+AGG | 0.510742 | 8.2:-28959462 | MS.gene012073:CDS |
TAGAGTTTGATCCATGGAGA+TGG | 0.510884 | 8.2:-28954345 | MS.gene012073:CDS |
AGAGTTTGATCCATGGAGAT+GGG | 0.513863 | 8.2:-28954344 | MS.gene012073:CDS |
TTCAGGGTACCTAATTCCTA+AGG | 0.517497 | 8.2:-28954431 | MS.gene012073:intron |
AGAAATGCGGTCTCTTTCGC+TGG | 0.517861 | 8.2:-28952086 | MS.gene012073:CDS |
GGTACCTAATTCCTAAGGAT+TGG | 0.534197 | 8.2:-28954426 | MS.gene012073:CDS |
TTACTTACCTCCCATCTCCA+TGG | 0.537033 | 8.2:+28954334 | None:intergenic |
TGCAGAGGATAATAGAGGAA+AGG | 0.539897 | 8.2:-28959269 | MS.gene012073:CDS |
AACCTTTAGAGTTTGATCCA+TGG | 0.543490 | 8.2:-28954351 | MS.gene012073:CDS |
TTTCGCTGGTGTGAACCTAT+CGG | 0.543938 | 8.2:-28952072 | MS.gene012073:CDS |
AGTCTTTGTCCACCACCAAA+TGG | 0.546787 | 8.2:+28954005 | None:intergenic |
GAATGATGAAGATAGTGCAG+AGG | 0.553285 | 8.2:-28959284 | MS.gene012073:CDS |
AATCAACGAAACCCTTAGAA+TGG | 0.554359 | 8.2:-28954597 | MS.gene012073:CDS |
GAATCACCTTGTTCACATCT+GGG | 0.554990 | 8.2:+28961301 | None:intergenic |
GATCTTGAACATATATTGGT+TGG | 0.556373 | 8.2:+28961070 | None:intergenic |
CTGGGATGAAGATGCTCCGT+TGG | 0.558215 | 8.2:+28961271 | None:intergenic |
GTGTGAACCTATCGGATATG+AGG | 0.559770 | 8.2:-28952064 | MS.gene012073:CDS |
GCCACAACACACCAATCCTT+AGG | 0.562925 | 8.2:+28954415 | None:intergenic |
GTGGACAAAGACTGTGTCCT+GGG | 0.563917 | 8.2:-28953995 | MS.gene012073:CDS |
TCCTAAGGATTGGTGTGTTG+TGG | 0.570683 | 8.2:-28954416 | MS.gene012073:CDS |
CCATATATTAGGGATTGTGT+TGG | 0.575659 | 8.2:+28959182 | None:intergenic |
GTCACTCCATGCATAATCAT+CGG | 0.576576 | 8.2:+28954765 | None:intergenic |
ATTGTTCCGATGATTATGCA+TGG | 0.580002 | 8.2:-28954771 | MS.gene012073:CDS |
ACAGCCATGGTCATAGCTGT+AGG | 0.591220 | 8.2:+28959102 | None:intergenic |
GCTGCGGCAACGAGTTCAGT+CGG | 0.591780 | 8.2:-28952018 | MS.gene012073:CDS |
AAATTATATAAATCTTCACC+AGG | 0.592502 | 8.2:+28959522 | None:intergenic |
CACAGACCCAGATGTGAACA+AGG | 0.592871 | 8.2:-28961307 | MS.gene012073:CDS |
GAATGATAATAAGGATTGTG+TGG | 0.594286 | 8.2:-28959247 | MS.gene012073:CDS |
TAAGTGCAGAAAATTGAAGC+TGG | 0.597843 | 8.2:-28954050 | MS.gene012073:intron |
ACTAATTTGGATAGAGCAAG+AGG | 0.600946 | 8.2:+28959060 | None:intergenic |
TTTGTACCAGGAAGAAAACA+TGG | 0.601697 | 8.2:-28954812 | MS.gene012073:intron |
TTTGAGTAAATTGCAGTGAG+AGG | 0.603091 | 8.2:+28954740 | None:intergenic |
GTAGGAAGAGTCTCTTCACC+AGG | 0.605614 | 8.2:+28959120 | None:intergenic |
GTTCTGATGAGCATTGATCC+TGG | 0.606345 | 8.2:-28959540 | MS.gene012073:CDS |
GTCCTGGGATTGAACTCTCA+AGG | 0.607193 | 8.2:-28953980 | MS.gene012073:CDS |
GGTGGACAAAGACTGTGTCC+TGG | 0.607449 | 8.2:-28953996 | MS.gene012073:CDS |
AGCCTTGAGAGTTCAATCCC+AGG | 0.614816 | 8.2:+28953978 | None:intergenic |
GTTCATGCCATCTAAATGAA+CGG | 0.616761 | 8.2:+28954381 | None:intergenic |
GGGATCGTAGGAATCCTCCT+AGG | 0.618164 | 8.2:+28961163 | None:intergenic |
ACATGGGAAGAACTCCATCA+AGG | 0.621397 | 8.2:-28964716 | MS.gene012073:intron |
AAACTTCATGCACTCCTAGG+AGG | 0.624453 | 8.2:-28961177 | MS.gene012073:CDS |
TTGCTGCAAGGAGGAATCAG+AGG | 0.626053 | 8.2:-28952112 | MS.gene012073:CDS |
CAGGCTATTCTATTGCTGCA+AGG | 0.627935 | 8.2:-28952124 | MS.gene012073:CDS |
TCTTCCTACAGCTATGACCA+TGG | 0.636811 | 8.2:-28959106 | MS.gene012073:CDS |
GTACCATCCTCATATCCGAT+AGG | 0.644953 | 8.2:+28952057 | None:intergenic |
GATTCGAGCTTTGAATTGTG+GGG | 0.648285 | 8.2:+28961143 | None:intergenic |
AGGTGATTCTACAGAACCAA+CGG | 0.648737 | 8.2:-28961287 | MS.gene012073:CDS |
ACTAAGAAACTTGACAGCCA+TGG | 0.649859 | 8.2:+28959089 | None:intergenic |
GCGTGAGTAGTTCTGATGAG+AGG | 0.654719 | 8.2:-28951996 | MS.gene012073:CDS |
GAACCTATCGGATATGAGGA+TGG | 0.656040 | 8.2:-28952060 | MS.gene012073:CDS |
AAGTTGTAACTAGATGATGA+AGG | 0.674071 | 8.2:+28953940 | None:intergenic |
GTCTGTGGACACAATCACAC+CGG | 0.678746 | 8.2:+28961323 | None:intergenic |
GTTTGATCCATGGAGATGGG+AGG | 0.686608 | 8.2:-28954341 | MS.gene012073:intron |
GAATCAGAGGAGAAGAAATG+CGG | 0.698837 | 8.2:-28952099 | MS.gene012073:CDS |
GCTATTCTATTGCTGCAAGG+AGG | 0.705883 | 8.2:-28952121 | MS.gene012073:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 28951843 | 28964736 | 28951843 | ID=MS.gene012073 |
chr8.2 | mRNA | 28951843 | 28964736 | 28951843 | ID=MS.gene012073.t1;Parent=MS.gene012073 |
chr8.2 | exon | 28964717 | 28964736 | 28964717 | ID=MS.gene012073.t1.exon1;Parent=MS.gene012073.t1 |
chr8.2 | CDS | 28964717 | 28964736 | 28964717 | ID=cds.MS.gene012073.t1;Parent=MS.gene012073.t1 |
chr8.2 | exon | 28961059 | 28961380 | 28961059 | ID=MS.gene012073.t1.exon2;Parent=MS.gene012073.t1 |
chr8.2 | CDS | 28961059 | 28961380 | 28961059 | ID=cds.MS.gene012073.t1;Parent=MS.gene012073.t1 |
chr8.2 | exon | 28959437 | 28959586 | 28959437 | ID=MS.gene012073.t1.exon3;Parent=MS.gene012073.t1 |
chr8.2 | CDS | 28959437 | 28959586 | 28959437 | ID=cds.MS.gene012073.t1;Parent=MS.gene012073.t1 |
chr8.2 | exon | 28959059 | 28959316 | 28959059 | ID=MS.gene012073.t1.exon4;Parent=MS.gene012073.t1 |
chr8.2 | CDS | 28959059 | 28959316 | 28959059 | ID=cds.MS.gene012073.t1;Parent=MS.gene012073.t1 |
chr8.2 | exon | 28954738 | 28954824 | 28954738 | ID=MS.gene012073.t1.exon5;Parent=MS.gene012073.t1 |
chr8.2 | CDS | 28954738 | 28954824 | 28954738 | ID=cds.MS.gene012073.t1;Parent=MS.gene012073.t1 |
chr8.2 | exon | 28954543 | 28954621 | 28954543 | ID=MS.gene012073.t1.exon6;Parent=MS.gene012073.t1 |
chr8.2 | CDS | 28954543 | 28954621 | 28954543 | ID=cds.MS.gene012073.t1;Parent=MS.gene012073.t1 |
chr8.2 | exon | 28954342 | 28954448 | 28954342 | ID=MS.gene012073.t1.exon7;Parent=MS.gene012073.t1 |
chr8.2 | CDS | 28954342 | 28954448 | 28954342 | ID=cds.MS.gene012073.t1;Parent=MS.gene012073.t1 |
chr8.2 | exon | 28953936 | 28954063 | 28953936 | ID=MS.gene012073.t1.exon8;Parent=MS.gene012073.t1 |
chr8.2 | CDS | 28953936 | 28954063 | 28953936 | ID=cds.MS.gene012073.t1;Parent=MS.gene012073.t1 |
chr8.2 | exon | 28951843 | 28952143 | 28951843 | ID=MS.gene012073.t1.exon9;Parent=MS.gene012073.t1 |
chr8.2 | CDS | 28951843 | 28952143 | 28951843 | ID=cds.MS.gene012073.t1;Parent=MS.gene012073.t1 |
Gene Sequence |
Protein sequence |