AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene01245

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene01245.t1 MTR_2g010180 98.517 607 9 0 1 607 15 621 0.0 1240
MS.gene01245.t1 MTR_2g010180 98.517 607 9 0 1 607 1 607 0.0 1239
MS.gene01245.t1 MTR_2g010180 98.637 587 8 0 1 587 1 587 0.0 1198
MS.gene01245.t1 MTR_3g096980 43.140 605 329 8 6 604 10 605 1.45e-163 481
MS.gene01245.t1 MTR_8g094740 42.787 610 337 7 3 607 7 609 1.27e-159 471
MS.gene01245.t1 MTR_8g094740 41.264 538 304 7 3 535 7 537 9.86e-127 384
MS.gene01245.t1 MTR_3g048950 34.234 444 245 11 179 588 90 520 8.24e-45 167
MS.gene01245.t1 MTR_4g074030 26.577 444 276 13 175 588 76 499 2.39e-24 107
MS.gene01245.t1 MTR_8g080890 24.847 491 306 11 130 588 42 501 1.40e-23 105
MS.gene01245.t1 MTR_8g080880 24.852 507 316 13 130 603 41 515 2.06e-23 104
MS.gene01245.t1 MTR_8g097220 26.220 492 318 14 130 598 38 507 1.51e-22 102
MS.gene01245.t1 MTR_8g080840 25.049 507 315 12 130 603 41 515 1.75e-22 101
MS.gene01245.t1 MTR_4g094205 36.158 177 109 2 195 370 72 245 5.28e-22 100
MS.gene01245.t1 MTR_1g082750 36.943 157 98 1 188 343 19 175 2.97e-21 97.1
MS.gene01245.t1 MTR_8g080870 25.157 477 323 12 130 588 12 472 5.55e-19 90.9
MS.gene01245.t1 MTR_8g095600 28.571 189 125 4 178 363 208 389 1.12e-15 80.5
MS.gene01245.t1 MTR_8g095600 28.571 189 125 4 178 363 224 405 1.75e-15 80.1
MS.gene01245.t1 MTR_8g095600 28.571 189 125 4 178 363 208 389 1.93e-15 80.1
MS.gene01245.t1 MTR_8g095600 28.358 201 129 5 178 375 208 396 4.06e-15 79.0
MS.gene01245.t1 MTR_8g066660 80.000 35 6 1 232 265 82 116 8.97e-13 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene01245.t1 AT5G64440 65.789 608 206 2 1 607 1 607 0.0 847
MS.gene01245.t1 AT3G25660 33.040 454 264 12 176 598 88 532 3.82e-43 162
MS.gene01245.t1 AT5G09420 36.667 150 94 1 196 344 71 220 6.14e-20 94.4
MS.gene01245.t1 AT1G08980 41.045 134 78 1 196 328 28 161 7.06e-20 92.8
MS.gene01245.t1 AT5G07360 26.882 186 128 3 178 361 250 429 1.90e-15 80.1
MS.gene01245.t1 AT5G07360 26.882 186 128 3 178 361 250 429 1.90e-15 80.1
MS.gene01245.t1 AT4G34880 24.066 482 317 13 130 588 45 500 4.39e-15 78.6
MS.gene01245.t1 AT3G17970 34.014 147 96 1 198 343 60 206 5.76e-14 75.5
MS.gene01245.t1 AT3G17970 34.014 147 96 1 198 343 60 206 7.56e-14 75.1
MS.gene01245.t1 AT5G07360 26.344 186 122 4 178 361 250 422 1.35e-12 71.2

Find 158 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAGGTCCTTGTGTGATTC+TGG 0.133397 2.2:-71183337 MS.gene01245:intron
AGTTGTTATACCAGAGATTT+TGG 0.172948 2.2:-71180814 MS.gene01245:CDS
GAATAACCTTGAACAATTTC+AGG 0.191012 2.2:+71186735 None:intergenic
CCAATAGGTTTGCAAGTAAT+TGG 0.196360 2.2:-71177914 MS.gene01245:CDS
AAGGGCACTTGGAGGTATTC+TGG 0.210956 2.2:+71179530 None:intergenic
ATTATGATCCTGCTAAATTA+TGG 0.211377 2.2:-71185786 MS.gene01245:CDS
CTCCGCATTTGACTGGCTTT+TGG 0.226279 2.2:-71186619 MS.gene01245:CDS
CGTTGTTCCAGCAAATCTTT+TGG 0.234166 2.2:-71179081 MS.gene01245:CDS
TCACCTTGAGGTGGATATTC+AGG 0.249639 2.2:+71186121 None:intergenic
ATTCCATCCAATATTGATAA+TGG 0.265502 2.2:+71185323 None:intergenic
ATGTTGCAGCTCAATGTATT+AGG 0.284658 2.2:-71180225 MS.gene01245:intron
CCAGCTGCAATTGTTGCTTC+TGG 0.294358 2.2:-71184507 MS.gene01245:CDS
CCAATTACTTGCAAACCTAT+TGG 0.297929 2.2:+71177914 None:intergenic
TTCATACTGATTCTATTTGC+AGG 0.303989 2.2:+71182331 None:intergenic
TGAATGTCACATACCATAGA+TGG 0.310578 2.2:+71185688 None:intergenic
TCTGGGACAGTGGAAGTTAT+TGG 0.318055 2.2:-71183319 MS.gene01245:CDS
AGGAAATCCATTATCAATAT+TGG 0.345811 2.2:-71185330 MS.gene01245:CDS
CTTTGAGATCATTAAGAATA+GGG 0.348168 2.2:-71181129 MS.gene01245:CDS
AAGGATTATGCATTACTTCA+TGG 0.364578 2.2:-71180088 MS.gene01245:CDS
TATACTGGTGGATCCTCTTC+AGG 0.367952 2.2:-71184531 MS.gene01245:CDS
ACAGGAAATAATTCTAATTA+CGG 0.369913 2.2:-71185050 MS.gene01245:CDS
ACATACCCGTCTTCAATATC+AGG 0.370840 2.2:+71180735 None:intergenic
TTTGACATACTACGATGTTC+TGG 0.371951 2.2:-71177438 MS.gene01245:CDS
GTCATAGTGACTCCAACAAC+TGG 0.380427 2.2:-71180045 MS.gene01245:CDS
TTATGATCCTGCTAAATTAT+GGG 0.383864 2.2:-71185785 MS.gene01245:CDS
CATCTGCACCCTTTCGGTAC+TGG 0.388404 2.2:-71185756 MS.gene01245:CDS
GCAATCTATGTCATCTTTGA+TGG 0.392919 2.2:+71185292 None:intergenic
AGCTGTGGTGTCATATTCAT+AGG 0.394249 2.2:-71185107 MS.gene01245:CDS
TAGAAAAGTAACCCCATCTA+TGG 0.395573 2.2:-71185701 MS.gene01245:intron
TTTGCAGCTCCGCATTTGAC+TGG 0.396207 2.2:-71186626 MS.gene01245:intron
AGGGCACTTGGAGGTATTCT+GGG 0.398378 2.2:+71179531 None:intergenic
ATATGATACTCGCACAAGTT+TGG 0.399269 2.2:-71180278 MS.gene01245:CDS
GATAAAGAAGGACTTCCAAT+AGG 0.405504 2.2:-71177929 MS.gene01245:CDS
TATCAGAGACTTCAGTTGAA+TGG 0.410074 2.2:+71181005 None:intergenic
TAGATGCTGCTGCCTGCTTT+CGG 0.412185 2.2:+71185495 None:intergenic
ACAGGTCCTTGTGTGATTCT+GGG 0.412487 2.2:-71183336 MS.gene01245:intron
AAAATTCATCTGCACCCTTT+CGG 0.413448 2.2:-71185762 MS.gene01245:CDS
TTGACATACTACGATGTTCT+GGG 0.415898 2.2:-71177437 MS.gene01245:CDS
AAGACAAATATGCACGAGTT+TGG 0.417094 2.2:-71185083 MS.gene01245:CDS
GGGAGTCCCAAAAGATTTGC+TGG 0.418915 2.2:+71179074 None:intergenic
TTTGTTGACTATGTTGAAGA+AGG 0.420160 2.2:-71186549 MS.gene01245:CDS
GCTTTGAGATCATTAAGAAT+AGG 0.422297 2.2:-71181130 MS.gene01245:CDS
GAAGGAAAATAAAATTGATC+AGG 0.430407 2.2:-71186531 MS.gene01245:intron
GATCCACCAGTATACCTATC+AGG 0.431268 2.2:+71184540 None:intergenic
TGCCATCCTCACCCGTCTAC+TGG 0.432336 2.2:-71185272 MS.gene01245:intron
ACTGCCCATCTTGTTTCCAT+TGG 0.434178 2.2:-71180783 MS.gene01245:CDS
TTAATTGAAGCTCCATTGAT+AGG 0.434858 2.2:-71186578 MS.gene01245:CDS
GTAGGATTGAAGATAAATTA+CGG 0.435294 2.2:-71184332 MS.gene01245:CDS
TTTAGGTATGCGGCAATGTT+GGG 0.435375 2.2:-71182361 MS.gene01245:intron
TCCTCTACCGTTGAAGCAAT+GGG 0.435551 2.2:+71183295 None:intergenic
TACGAACCTGAAATTGTTCA+AGG 0.435654 2.2:-71186741 MS.gene01245:intron
CATGCACCTGATAGGTATAC+TGG 0.436633 2.2:-71184546 MS.gene01245:CDS
CAGGAAATAATTCTAATTAC+GGG 0.439620 2.2:-71185049 MS.gene01245:intron
ATTTAGGTATGCGGCAATGT+TGG 0.440660 2.2:-71182362 MS.gene01245:intron
CGCACTTACCGGGACAGAAA+TGG 0.443679 2.2:+71179049 None:intergenic
TAGGATTGAAGATAAATTAC+GGG 0.444516 2.2:-71184331 MS.gene01245:CDS
GGTTTAAACATGGGTTCCTC+GGG 0.447719 2.2:+71186142 None:intergenic
AGGTTTAAACATGGGTTCCT+CGG 0.451628 2.2:+71186141 None:intergenic
GAAATCCTCATGCACCTGAT+AGG 0.452101 2.2:-71184554 MS.gene01245:CDS
AATCTGCTGCGGTAAATGAC+TGG 0.461517 2.2:+71180248 None:intergenic
TTGTTGAGCTTGACGAAGAC+GGG 0.465538 2.2:-71185852 MS.gene01245:CDS
GAGTTTGGCATGGGTACAAC+AGG 0.465699 2.2:-71185068 MS.gene01245:CDS
ATACATGCATACCCAGTTGT+TGG 0.471985 2.2:+71180033 None:intergenic
GGACTATGTTCTGCTGCACT+TGG 0.473941 2.2:-71184486 MS.gene01245:CDS
ATCCTCTACCGTTGAAGCAA+TGG 0.476368 2.2:+71183294 None:intergenic
TCTGCTGCACTTGGCACTGA+TGG 0.479744 2.2:-71184477 MS.gene01245:CDS
ACCCATTGCTTCAACGGTAG+AGG 0.481675 2.2:-71183296 MS.gene01245:CDS
TCTACTCAGAGGTTTGAATC+AGG 0.485167 2.2:-71185476 MS.gene01245:intron
TCTTCCCTGTGTGGTGTGGT+AGG 0.487681 2.2:-71184350 MS.gene01245:CDS
TAATTATTCAGAAACTCTGC+GGG 0.488714 2.2:-71177478 MS.gene01245:intron
TTCCCTCAGGTTACCTCATG+CGG 0.502096 2.2:-71179106 MS.gene01245:intron
AAATAGAATCAGTATGAAAC+CGG 0.503166 2.2:-71182326 MS.gene01245:intron
GACGACAGGGTTGGCAAACA+AGG 0.505077 2.2:+71181169 None:intergenic
GTTCGCATCTCCAAAATCTC+TGG 0.505306 2.2:+71180804 None:intergenic
GCTGCACTTGGCACTGATGG+TGG 0.506531 2.2:-71184474 MS.gene01245:CDS
CTGTATCATCATCAGACGAC+AGG 0.507878 2.2:+71181155 None:intergenic
GCATCAAAAGATAACAATAG+TGG 0.509099 2.2:+71185527 None:intergenic
CCTCCAAGTGCCCTTAAAAG+TGG 0.512760 2.2:-71179522 MS.gene01245:CDS
TGCAAGTAATTGGCCGACCA+TGG 0.514606 2.2:-71177904 MS.gene01245:CDS
ACTCCCTGCCATTTCTGTCC+CGG 0.516543 2.2:-71179057 MS.gene01245:intron
ACCACACCACACAGGGAAGA+AGG 0.518588 2.2:+71184353 None:intergenic
TATTGGACCCATTGCTTCAA+CGG 0.522918 2.2:-71183302 MS.gene01245:CDS
ATCTCAATTATAGAAGAGAA+TGG 0.523202 2.2:-71185569 MS.gene01245:CDS
CAGAGCCAATGGAAACAAGA+TGG 0.528434 2.2:+71180778 None:intergenic
TCCTTCTTCCCTGTGTGGTG+TGG 0.532083 2.2:-71184354 MS.gene01245:CDS
ATAATGTGGAAGACAGTTCA+AGG 0.534127 2.2:+71185804 None:intergenic
CCAGAAGCAACAATTGCAGC+TGG 0.536492 2.2:+71184507 None:intergenic
GCGTGTAATGGTGCCGGCGA+AGG 0.542213 2.2:-71186787 MS.gene01245:CDS
AATCCATTATCAATATTGGA+TGG 0.543937 2.2:-71185326 MS.gene01245:CDS
GCAAGTAATTGGCCGACCAT+GGG 0.544819 2.2:-71177903 MS.gene01245:CDS
TGCTGCAGAAGTCCGAAAGC+AGG 0.549249 2.2:-71185507 MS.gene01245:CDS
GACAAATCTACGTCCTTCGC+CGG 0.549587 2.2:+71186774 None:intergenic
GAAACAGATATGCCGACTAC+AGG 0.549803 2.2:-71179498 MS.gene01245:intron
GAATGTCACATACCATAGAT+GGG 0.549812 2.2:+71185689 None:intergenic
TACGGGCGAACAAGCATGCA+GGG 0.550171 2.2:-71184314 MS.gene01245:CDS
TTACGGGCGAACAAGCATGC+AGG 0.553152 2.2:-71184315 MS.gene01245:CDS
GTTGTTGAGCTTGACGAAGA+CGG 0.553945 2.2:-71185853 MS.gene01245:CDS
GCACTTGGCACTGATGGTGG+AGG 0.555057 2.2:-71184471 MS.gene01245:intron
CTGAATCCTGATATTGAAGA+CGG 0.555687 2.2:-71180741 MS.gene01245:CDS
ACTTAAGCATTCAGAGCCAA+TGG 0.556698 2.2:+71180767 None:intergenic
GCAGACTCAACTCTACCTTC+AGG 0.561557 2.2:+71185826 None:intergenic
CTTGTGTGATTCTGGGACAG+TGG 0.562726 2.2:-71183329 MS.gene01245:CDS
TACCAGTAGACGGGTGAGGA+TGG 0.564172 2.2:+71185270 None:intergenic
AATTGCAGCTGGACCTGAAG+AGG 0.566596 2.2:+71184518 None:intergenic
AAAATAGTAGCTTCTGCCCA+TGG 0.567660 2.2:+71177887 None:intergenic
AAGACTTGCTTACCAGTAGA+CGG 0.569754 2.2:+71185260 None:intergenic
AAATATGCACGAGTTTGGCA+TGG 0.570637 2.2:-71185078 MS.gene01245:CDS
AAAGATAACAATAGTGGTGA+CGG 0.574864 2.2:+71185533 None:intergenic
TGCTCTTAATCTGCTGACAA+AGG 0.575420 2.2:-71180972 MS.gene01245:CDS
GCGTGTAGCAGCTGCAGTAG+AGG 0.576619 2.2:-71177864 MS.gene01245:intron
GACGAAGACGGGAGACCTGA+AGG 0.582768 2.2:-71185841 MS.gene01245:CDS
CAATCCTACCACACCACACA+GGG 0.584913 2.2:+71184346 None:intergenic
AGAGCCAATGGAAACAAGAT+GGG 0.587028 2.2:+71180779 None:intergenic
TGAGGTACGTGATGTAAAGA+TGG 0.590401 2.2:-71185156 MS.gene01245:CDS
GGATATTCAGGTTTAAACAT+GGG 0.591927 2.2:+71186133 None:intergenic
CTGGAACAACGAACCGCATG+AGG 0.598017 2.2:+71179093 None:intergenic
GCTGTGGTGTCATATTCATA+GGG 0.598801 2.2:-71185106 MS.gene01245:CDS
TGAATCCTGATATTGAAGAC+GGG 0.601894 2.2:-71180740 MS.gene01245:intron
TGGATATTCAGGTTTAAACA+TGG 0.605365 2.2:+71186132 None:intergenic
AGACTTGCTTACCAGTAGAC+GGG 0.606123 2.2:+71185261 None:intergenic
TCAATCCTACCACACCACAC+AGG 0.606857 2.2:+71184345 None:intergenic
TGACATACTACGATGTTCTG+GGG 0.607569 2.2:-71177436 MS.gene01245:CDS
CGTATTCCTTCTTCCCTGTG+TGG 0.608557 2.2:-71184359 MS.gene01245:CDS
TGCTTACCAGTAGACGGGTG+AGG 0.609661 2.2:+71185266 None:intergenic
AGAACATCGTAGTATGTCAA+AGG 0.610914 2.2:+71177440 None:intergenic
AAACCTGAATATCCACCTCA+AGG 0.614550 2.2:-71186124 MS.gene01245:intron
AATATGCACGAGTTTGGCAT+GGG 0.615363 2.2:-71185077 MS.gene01245:CDS
TCATCATCAGACGACAGGGT+TGG 0.616719 2.2:+71181160 None:intergenic
TTGATGATGAACAGTTATTG+CGG 0.622495 2.2:-71186177 MS.gene01245:intron
TAGTAGCTTCTGCCCATGGT+CGG 0.623776 2.2:+71177891 None:intergenic
CTTACCGGGACAGAAATGGC+AGG 0.627245 2.2:+71179053 None:intergenic
AAGAATAGGGATTTACACAC+CGG 0.628557 2.2:-71181116 MS.gene01245:intron
GTTTCAAGACTTCGTAGCTG+TGG 0.631384 2.2:-71185122 MS.gene01245:CDS
TATAAGAAATCACCTTGAGG+TGG 0.632445 2.2:+71186112 None:intergenic
AGCTGCAACATAATCTGCTG+CGG 0.633134 2.2:+71180237 None:intergenic
CTAATTATTCAGAAACTCTG+CGG 0.635675 2.2:-71177479 MS.gene01245:intron
GTGCTCATAATTTAGGTATG+CGG 0.636761 2.2:-71182371 MS.gene01245:intron
GACATACTACGATGTTCTGG+GGG 0.642563 2.2:-71177435 MS.gene01245:CDS
CACTGTCCCAGAATCACACA+AGG 0.642913 2.2:+71183330 None:intergenic
AACCAAAAGCCAGTCAAATG+CGG 0.643609 2.2:+71186617 None:intergenic
TGAAGACAATCACCTGTAGT+CGG 0.645553 2.2:+71179486 None:intergenic
TCATAGTGACTCCAACAACT+GGG 0.645754 2.2:-71180044 MS.gene01245:intron
GCACCTGATAGGTATACTGG+TGG 0.651148 2.2:-71184543 MS.gene01245:CDS
AATTTAGCAGGATCATAATG+TGG 0.654665 2.2:+71185790 None:intergenic
TGATGGCAGGTGGATCAACA+TGG 0.655375 2.2:-71185184 MS.gene01245:intron
GCGGAACACTGTGTTTCCCG+AGG 0.661305 2.2:-71186158 MS.gene01245:CDS
GTATACCTATCAGGTGCATG+AGG 0.661313 2.2:+71184549 None:intergenic
AGGCAGCAGCATCTACTCAG+AGG 0.664025 2.2:-71185487 MS.gene01245:CDS
TAGGTGGGTTACGATAAAGA+AGG 0.665548 2.2:-71177941 MS.gene01245:CDS
TGTATCATCATCAGACGACA+GGG 0.673871 2.2:+71181156 None:intergenic
TTACCGGGACAGAAATGGCA+GGG 0.679571 2.2:+71179054 None:intergenic
GATAACAATAGTGGTGACGG+AGG 0.683406 2.2:+71185536 None:intergenic
TGGATCAACATGGATGCATG+AGG 0.684231 2.2:-71185174 MS.gene01245:CDS
AATCTGCTGACAAAGGCACA+TGG 0.685458 2.2:-71180965 MS.gene01245:CDS
TGAAGTCTCTGATAAATGTG+AGG 0.686127 2.2:-71180996 MS.gene01245:CDS
AATGTCACATACCATAGATG+GGG 0.687753 2.2:+71185690 None:intergenic
ACGGGCGAACAAGCATGCAG+GGG 0.697506 2.2:-71184313 MS.gene01245:intron
AATTATTCAGAAACTCTGCG+GGG 0.779744 2.2:-71177477 MS.gene01245:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr2.2 gene 71177427 71186820 71177427 ID=MS.gene01245
chr2.2 mRNA 71177427 71186820 71177427 ID=MS.gene01245.t1;Parent=MS.gene01245
chr2.2 exon 71186742 71186820 71186742 ID=MS.gene01245.t1.exon1;Parent=MS.gene01245.t1
chr2.2 CDS 71186742 71186820 71186742 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71186532 71186641 71186532 ID=MS.gene01245.t1.exon2;Parent=MS.gene01245.t1
chr2.2 CDS 71186532 71186641 71186532 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71186125 71186185 71186125 ID=MS.gene01245.t1.exon3;Parent=MS.gene01245.t1
chr2.2 CDS 71186125 71186185 71186125 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71185702 71185889 71185702 ID=MS.gene01245.t1.exon4;Parent=MS.gene01245.t1
chr2.2 CDS 71185702 71185889 71185702 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71185477 71185606 71185477 ID=MS.gene01245.t1.exon5;Parent=MS.gene01245.t1
chr2.2 CDS 71185477 71185606 71185477 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71185273 71185350 71185273 ID=MS.gene01245.t1.exon6;Parent=MS.gene01245.t1
chr2.2 CDS 71185273 71185350 71185273 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71185050 71185197 71185050 ID=MS.gene01245.t1.exon7;Parent=MS.gene01245.t1
chr2.2 CDS 71185050 71185197 71185050 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71184472 71184584 71184472 ID=MS.gene01245.t1.exon8;Parent=MS.gene01245.t1
chr2.2 CDS 71184472 71184584 71184472 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71184314 71184389 71184314 ID=MS.gene01245.t1.exon9;Parent=MS.gene01245.t1
chr2.2 CDS 71184314 71184389 71184314 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71183283 71183354 71183283 ID=MS.gene01245.t1.exon10;Parent=MS.gene01245.t1
chr2.2 CDS 71183283 71183354 71183283 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71182327 71182378 71182327 ID=MS.gene01245.t1.exon11;Parent=MS.gene01245.t1
chr2.2 CDS 71182327 71182378 71182327 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71181117 71181197 71181117 ID=MS.gene01245.t1.exon12;Parent=MS.gene01245.t1
chr2.2 CDS 71181117 71181197 71181117 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71180958 71181041 71180958 ID=MS.gene01245.t1.exon13;Parent=MS.gene01245.t1
chr2.2 CDS 71180958 71181041 71180958 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71180741 71180844 71180741 ID=MS.gene01245.t1.exon14;Parent=MS.gene01245.t1
chr2.2 CDS 71180741 71180844 71180741 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71180226 71180318 71180226 ID=MS.gene01245.t1.exon15;Parent=MS.gene01245.t1
chr2.2 CDS 71180226 71180318 71180226 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71180045 71180113 71180045 ID=MS.gene01245.t1.exon16;Parent=MS.gene01245.t1
chr2.2 CDS 71180045 71180113 71180045 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71179499 71179563 71179499 ID=MS.gene01245.t1.exon17;Parent=MS.gene01245.t1
chr2.2 CDS 71179499 71179563 71179499 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71179058 71179119 71179058 ID=MS.gene01245.t1.exon18;Parent=MS.gene01245.t1
chr2.2 CDS 71179058 71179119 71179058 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71177865 71177960 71177865 ID=MS.gene01245.t1.exon19;Parent=MS.gene01245.t1
chr2.2 CDS 71177865 71177960 71177865 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
chr2.2 exon 71177427 71177489 71177427 ID=MS.gene01245.t1.exon20;Parent=MS.gene01245.t1
chr2.2 CDS 71177427 71177489 71177427 ID=cds.MS.gene01245.t1;Parent=MS.gene01245.t1
Gene Sequence

>MS.gene01245

ATGGGGAAAAAGCGTGTAATGGTGCCGGCGAAGGACGTAGATTTGTCTTCAATCAAATACGAACCTGAAATTGTTCAAGGTTATTCATTCATTCTACTAACTTCAATTGTTTCTTCTTTCGTTAACCAATTTCACTCGAATTCAACTTTGATTTGACTTTTTTTGTTTTGTTTTTGCAGCTCCGCATTTGACTGGCTTTTGGTTTCGATTTTTTGTGAGGTTAATTGAAGCTCCATTGATAGGTCCTTTTTTGTTGACTATGTTGAAGAAGGAAAATAAAATTGATCAGGTTTGTGTCACTCATTGAGTTAGTGTGCTTAAATTGTTACTCGTATTATCGTGTTTTGTATTGAAGAAGTTTTTACTTCAGTTATGTGTCGTTATAATATTTTTGAAGAAGTTATAATATTTTATGTCATAGAACTGACACTTTAGATTGAAAGCATGTTTGAGTGTCTGGCACATGTTGATGTCCAAAGCTGATACGACATTGACACCTTACAAGCACTTTTATTTTTTAAAACCATTTTCAGTGTCTATCTATCGGTTTTATTTTCGTAGAGTGACATTGGTGACTGGTTTTATATTATGTATGCTTGTTTTACTGTTAATTTTCCGGTTTTGATGATGAACAGTTATTGCGGAACACTGTGTTTCCCGAGGAACCCATGTTTAAACCTGAATATCCACCTCAAGGTGATTTCTTATACTATATATTTATATGTTTGCATCGAAGAAGTTCTTGTCGAATTTACCGAAACTTAAAGCTTGATTTGTAGAGATTGTTTGGGATGACTAGAAGGGAAAAGGAGGAATAAAATTACCTTAGAGATAATGAAAACTAGCAATTCTGCTAAATTATTTGCATTGCATTTGAAGAAGCATGTTTGGCCATATAATAACCCAACCTAATGTTGCAACATAAATTCAGAAAAGGAACACAGTGTTGTTGAGCTTGACGAAGACGGGAGACCTGAAGGTAGAGTTGAGTCTGCCTTGAACTGTCTTCCACATTATGATCCTGCTAAATTATGGGAAAATTCATCTGCACCCTTTCGGTACTGGAAAATACGTGACTATGCTTATGCTTATCAGTCTAGAAAAGTAACCCCATCTATGGTATGTGACATTCAGTTGATAGCAACCTCAAATATAGAATTATCTTTATTCTAAATTAACTTGATAAATGAAATGATTTCACTTTGAATACATAGGTTGCTGAGCGCATCATCTCAATTATAGAAGAGAATGGAATAGATAAACCTCCGTCACCACTATTGTTATCTTTTGATGCTGCAGAAGTCCGAAAGCAGGCAGCAGCATCTACTCAGAGGTTTGAATCAGGTAATCATGTATGATTCAAATCTGCAAATAGATGTTTAAGTGTAAATCATTGATACATGATTATGTTGAGACATGGTGGGACCAAGCCTGGATAATTATTGTAGTCACACTCTTGGCCTTATGCAGGAAATCCATTATCAATATTGGATGGAATTTTCATTGCCATCAAAGATGACATAGATTGCCATCCTCACCCGTCTACTGGTAAGCAAGTCTTAGGATGTAACTTTGTGTGAGTAATTAAAGAGACACGCTTAGATCATCTTTTGGTGATGGCAGGTGGATCAACATGGATGCATGAGGTACGTGATGTAAAGATGGATGCTGTCTGTGTTTCAAGACTTCGTAGCTGTGGTGTCATATTCATAGGGAAGACAAATATGCACGAGTTTGGCATGGGTACAACAGGAAATAATTCTAATTACGGGTAAGTTAATTTATATGTTATTTATTGATGCCGTTATAAACATAAGAGGCTTTTGGCTTGTTAGAAGGGCGATATGTGCATGCTTTACCTAATACATATTTAGGACTTTATTGCTTCCCACTCTTCCTTCTTCCAAATTAGGGGACACAAGTAGTCAAGTACAGATGTTAACAAGTGTGTTCTTATTTTCATTCCTTATGTGTTCATTTCACTTGGCTTCCATCACAAGCTTAAGAACCCTTATTGAAAGGCAAAAAAATGTTTTATGGAAAGGCAACAAATGAGGGAAACTTGAAGAAATGGAAGAGTAACGGAAAATTGCACACTCATGTGCACAATAAGATCATGAGTGTATGACCGAACCCAATATACCCTTGAAAACTATTTTGGTTGCTCATAATTTTCTTACGTTCTTCATCAAAATATACATATGTGATTGTTCAACTGAAATTTCTTGAGTTGCAGAACTGCAAGAAATCCTCATGCACCTGATAGGTATACTGGTGGATCCTCTTCAGGTCCAGCTGCAATTGTTGCTTCTGGACTATGTTCTGCTGCACTTGGCACTGATGGTGGAGGTTGTGCAAATCTGATGTGTCAAACTATTTATTTGCACCAATTCTATATATTGATTCTCATTTTCAAATATTGTGAAGGCAGGTTCAGTACGTATTCCTTCTTCCCTGTGTGGTGTGGTAGGATTGAAGATAAATTACGGGCGAACAAGCATGCAGGGGTAATTTCTCACTATGTGCTAGATCAATCATAACCAGCTCTTTGTGTGTACTATTTGTTATTCAAGAAAGTGATATTTACCCTATTGTAACATGTAGGAGCAATTATATTTTGCGACCTTATTATTCTATATTTTGGGGTAATGATTGCCCATTTTGTATTAGAGCTATGAATTGAATTTGTCAAATTCCATACTTTTTTTTCAGTGTTGCACCAAAGAAAAGAATATACGTTGAATAAATTCCTTTAGTGCCAAATTGAAGAAAGCTTGCTGCAATAGATCTTAAATATATTGATCAAACACTACATGACTGCGATGGTCATAACACAAAAAGTATCATCTTTTAGGTTATTACTCGAAATTATTGTCATTTGACATTGGTTTAAAAGTATGCTACATTATTAGTCTATCTAAGAGACTGAAACCTAGGGAATTAAGCCCAGCAAACAATCCTCCTTTATTATGTGGGTAATAGTCCGGTCTTTTGATAGTGAAGGAACTTCTTTAACTTCTATTCATCAAACTTAGAGTTTCTTTTCACATTCTAGTCTTAGACATTCGTGGATAATAGTTATAGTGTGTTTTGTGACCGTTGGATCTTTGATGGTTAGTGAAATATTTTTCAATCTTCTAATATTATTGCATGATGCATTTTCTCATTTCATTTGCACAAAAAATTCAATGAAAACATGTTATCTTCTCACTTAGAATAAAGTTTACAATTTAGCAGTTTTCAAAGAGCAACATGTCGGAGTAGTACATATCTGAGAAACGTGTAAGGTTCCCAGAATTTAGAAAAAAATAATTTTTATGTGCCAAAGTTTGTGACATTGACTTGGTAATAAAAAAAAAAGGATCTATGGAAATATATTTAGTTGAATTAAAATACAATTAGTGTTTGACTAGCTAAATTTATTTTATCTGGAACTCACACCATTAATTTTTTTATTTATTTACAGGTCCTTGTGTGATTCTGGGACAGTGGAAGTTATTGGACCCATTGCTTCAACGGTAGAGGATGCGATGCTAGTGTATGCAACACATATTTTTCCTGTTTTCGCTCAGTTTTCTTTTTTAATTAATTCTTTCATTTTGCTTGTCGGCTATCTACTTTGCGTTCCTCAAAAGACCAGTTACTTTTCATTATTCCTCCATGGACACACAGGTTTCGCGATGCTAGCGGTTGATTTATGTTGGGTCCTAATTAGTAACTAAGCACTTTGGAAATCCACCCTTAAAGCTAACTATTAAGGGGTAGAACCAAGCAACTTAAATATTCCACCAAGCATCCCATACTACTAGATGTAGGGCTGAGGCACCCAAAATCCCTATTATGCGCAGAATTCTCATTGTGCAGTATTATACTTATGTAGAAGTTTTATCTGGGATTTTCAGTAGAAGTGAAGTGTTTATTTGGTAAATTGGTTTTTAGAATCAAATGGACATTTACAACCAAAATAAATTAACATTGTCTAATCACACAGCATCAAAAACAAAATTAGTTATCAACTTTAATTCTTGCAAAATGCAAGGCCTAAAATAAATGTGAACTTCCTTACTGGCATCTTTATGGTTTACGCCCTAAACTTTCTTTTACACATTTGCTTCATTGCAACTTTTTCAAATTTTTTCTCTTTTGATAGAAAGCTTCCTCAACGACCCTTCACATCATGCTTTTTGCTCATGTAATATAAACTGCTGTTCCAGATGCAATGTTAATTTTCCTATAGCATCAATGATTTCCGGTCCGGTGGTTACGCAGACATTTTTCTTTAGCTTCCCTTCAGTTAAACTTATACTTATTCAAGACTAGATCTCTGCGGTTTTAATTGTTTGAGATAACATTTCAATAGTCGATGTTAAATATAAAATGAAGATAACAATAGCCTTCCTCTTGAAGATATATAATGAATATTTTGTGTGCTCATAATTTAGGTATGCGGCAATGTTGGGTGCATCACCTGCAAATAGAATCAGTATGAAACCGGTAATCTTTAATCCTTCAATTGATATTCTTTTCAGTGATAAGAAAAGCTGAGATTGGAAACTAAAATGTTGAAAATTAGATGTCATGGACTAATTATACATATAAAAAAAGCAGGCAACCTTACAATTATCTCAGGTTAATTGTGGTGGTTAGCTACCCTAACTAAAAGAAAAAATTGAGGTGCAGGAAAAAAAGAGATAGCATTTTCAAAGGCTGCTGTACTGACATTATGAGACTCATGTAGTTATGATTGAGCACCTGAGATTTCTTAGAATATTCATTTGTTATGAATCCTGTGATTTTGGATTCCGTTTTTCTAAACAGTACGTAAATTTTCATTTAAAATTCTGGCGTAATAGGGAAATAACTAACCATATGCGGAGGAAATAAAAAAATAGATAACCATGGATCAGGTAAAAAGGTTACTGTAAAACATTTTACAGAGGAAATTTTTGTACTCTTCAATCTCACTCTTTTGGATTTAAATCTCTCTTTTGGAGTTCATTTAATGCAAATTTGTTTCTCTATCTATGTTTCGTTTTTGATAATTACCATTTTAGTTGAAAAAAAAAAGATACTAAATTTTTTAAAGCATCTTTTAGGGGGGGGGGGGGGGGGGGGGGGTTTATCCCTCTGGCAATCTCATAATACCAGTATTCGAGAACACCAATACCAAATAGCATGGTGCAGACACAGAAACTAGCAAGAAGAAATGCTTGAGAACTTTCATGTGAAACAGAAGAGCTTCTACTATTTCAGTGACATTTCTGTTCCAGCACTATCCTGTTGGTGTATATGATTCTGAATATTATTTGAAAAGATCTAAAGAGTTCAAACACTAATCTGAATATATTGACTAAGCTTAACTAGTGGGTCTAACGGGTTAAATACAAAATTATTAATAATTGCATAACATGTGCCTACAGCTATACAACAACAACCACCAAGCTTTATCCCACTAATAATTACATAATATGTGCCTACAACTATAATTACTTATTTACAAATCTGCATGACATAAACAAACTACCATACCAAATTACCAACTCATATTCTACCATTATGTACTCTGTTTTTTATTTGAAACATTTTAATAATTATGATGTTTGCATTTCTCTGTTTCTTGTAGTCAACACCTTGTTTGCCAACCCTGTCGTCTGATGATGATACAGATGCTTTGAGATCATTAAGAATAGGGATTTACACACCGGTAATCACGCTATCCTTTGAACATGGAGTTTTATGATAAGCTTTTTCTAAACAACATATATTTATTCCTGTGAAGTGGTTTAATAATGTCCATTCAACTGAAGTCTCTGATAAATGTGAGGATGCTCTTAATCTGCTGACAAAGGCACATGGTTGTGAAGTAAGTACATTGTATATTCATGTACCGCATGATTGTTTGTACTTTATTTCTAGTCTCGCATGATGATGGTGTCAAACAAGTCTAAGTATTACACATATCTCCCATATTTCAAGGTGGTAGAAGTTGTTATACCAGAGATTTTGGAGATGCGAACTGCCCATCTTGTTTCCATTGGCTCTGAATGCTTAAGTTCACTGAATCCTGATATTGAAGACGGGTATGTTTGAGTATATTTTTTTTTTTTTTTTGTTTTTGTTGGAGGCACATATGTTTGAGTATATTAAAGCTTTAGTGTTGGTAATTTCATTTATAGTCTTAATAGAGCAAACAATAGATAGATAACTGTGCTGACTCAGCACAGTCCCTAACTGAATTAGAATCAGTTGAGAACAGGTATAAATACCTGTTGCTACTATAATTGTGAATAGAATTCAGTTTACAGAAAATATTCAACATAGATTTTCAATCACTTTCTCTCATTTTCTCATTCACCAATGAACTATTCTTAGTTTCTATCAGGTCTGATTCTAACAAGGCAATTTGGTTTTTTTGTTAAAAGGCACCCTTCTCATCTTTTACCTTGCCTGGAAGTTTTCATGAGAAATTTATGGTGGTTTCCTTACTTCTTTTCTTTTATAGGAAAGGTGTAAAATTGTCATATGATACTCGCACAAGTTTGGCACTTTTCCAGTCATTTACCGCAGCAGATTATGTTGCAGCTCAATGTATTAGGTAATACAAGTTTATAATAAATATACCAAATTTACATCCTTTTAGTCAAATGTAAACTCTACTTAATTTTTTTTGTGTATACAGCTTCTAAAGTTTATTTTATCCGTTTCAGACGAAGGATTATGCATTACTTCATGGAGATTTTCAAGAAAGTTGATGTCATAGTGACTCCAACAACTGGGTATGCATGTATAATGAACAACTACAGTAGAAATTCAACTAATTGTAATGGACCATTTGTACTGTCTTAAATTTCTGTTCAATTGATCTAATGTGGTTTGGATTCATCTAAAATTATTTGGTAGGATTAAAAGTTGAATTTTATAGTCTGGATAACAGTACACATGACATTTGTTAAATAGTTTATTGGTATTAAGACAATTACATTATCATTATAGCATCTGATATCTACTTGTTCACGCTTCATCAAACCAAGAAAAGAAAAGATTAAAACTTTTAAGGAAAACCTAACTGATCTTATCAGATCTGATGATTTGTCTTTGATCAGTTAGCAGCAGCTTTTTTAGGTTATAAGTAAAATTTTTGGGAGGGTGGGACTGAAAAACAAGTGTCATTGATGAGGAAACACCTGTTTACGAAATTCAACCGCGACTTATTTTTGGAAGGTTTTGTTGTTGCTGAACTGCTTTTATTTGTGACAGTATGACAGCTCCCAGAATACCTCCAAGTGCCCTTAAAAGTGGTGAAACAGATATGCCGACTACAGGTGATTGTCTTCACTTTTAAATATTAGATTGATGATATATTTTCCTGAATGTTTTGCTAAGAAGCGTCCCTATAAATTATAATGTTTATCATCTCGCAATAAGATAACTTGTTTGTTGGCATTAGATGAGTTAATGGTCTTCAGACTCGTAGGTCAACAAAAAAGCCAAACAAAAGTTTTCCATCAAGATTCTGATTCCATAATCTATTTATCATGACTGAATCCAGAGTATTGGTGGCATTTGTTTTCACTAGATAAGTTGGAAATAATGGATTGGATGTGTGTTTTTGGACACCATTTTCTTGACCTTATTTAATACACAATGACTTGCTTTGTTCCATGTATTTTAATTAGAAGCTTTTTTTTTTTTTTCCCTCAGGTTACCTCATGCGGTTCGTTGTTCCAGCAAATCTTTTGGGACTCCCTGCCATTTCTGTCCCGGTAAGTGCGAGTGTTATCAATCATTCAAGAGTATTGTGTTATTATTTTTTGTCTTGGGAGTACTTTGATTCAGATAACCATAATAATTGCTTACAGGCTGATTCTTTTAAGCTAACAAAAAAATATTTTTGAACAAAAGTATGTATTCGGCACAAGAGATGCCAAATTAGGCCACAGAATTCCAAACCAACCTGAGAGAAAGCCATCCTGATAATCCCTAACCCCAAAAAACTGTGATACACCAAACAACAAAAGAAGCAGCTAACATATTAAACTACACAAAATAAGAAAAGAAATAGCTAACATATTAAACTACACTTGTAATTTTCAAAAACACCCAAACATGCAGCAGGATTAGTCAACCAAGATGAAATAGGGTATCTAAAACCGGATAATCTCACAGTTAGCCAACTCTAAGATTTCAGTTTTGCCACTTCTGCAATCTTTTCCACATCCAAGGAAACTGACTTGAATTATTGCAAACTATATTGATCACCAAGCATCCTGATACTCCTTCCTTACTACATCACAGCAACCCCTGAAACTGTAAGAAGTGATTCCTACAGTCATTATGCAATATTGAAGTTACACCCATCCACATGAGACATGACCTTCAAACTTCTCGATAAGCAGGGCATTCAAAGAATAAATGACTGGACGATTCTACTGTCGACTGACAACCAAGATACATTCATTCTGATAGTGACAACATATTTCCATTCACTGAATTTACTTTTGTAGGCACTGTACTCTATTCAACGCCAATCTCCAAACAAAACCTCACAGCTTCATACAAGTTTGTTCCATATTTTAGCAAAAAATAAATCCGGATTGTGGGTTCTCCCATTTCAAAGCTCCATATATGTTGTCTCTACTGTATACTTCCCACGCTGATCTCCTTTCCATCACGAAAATCAGAGTCCCATATGTTCAAAATCACCTTAGATAATAACACCTGCAGTTCATTTAACAATTGAAGTTCTCACTGAAATAAATCTCTCATCCAATTCCCCTCAATCCATTTACCCATCTTTGTCACTAGACTGGTATTATCATATATGTTGTTTATTCGTTTAATTGACATGTTCCTTCTATAGGTGGGTTACGATAAAGAAGGACTTCCAATAGGTTTGCAAGTAATTGGCCGACCATGGGCAGAAGCTACTATTTTGCGTGTAGCAGCTGCAGTAGAGGTACGTCTATTTTCATGCATAAATATAATAAGTGTTAATACTCAAAACCTAACCCAAAGTTTGTGTGATGTATGAATTTGTCTTTATATCTATTATTATAAGAGTTTAATTTATACACGTTCCAAGTATAAAAGTATACACATGAATCTGATTATTTCTAAAAAGTGGTTAATGAAGTGGACTTATGTAGCGATTTGATGAGTTTTCATTGGATGTCGGTGCAAAACTAATTTACATTGATAGTGCATCACCATTAAAAGATGATGGCAACACTTCATTTAAGGAATGTTTAAAATATTTTTACACTGACGGCGTATATATTTATTGTTTATATTTTTGGTAAACTTACTTCCTAATTACTTCCTAATTATTCAGAAACTCTGCGGGGAGTCAAAGAGAAGACCTTTGACATACTACGATGTTCTGGGGGCAAACTGA
Protein sequence

>MS.gene01245.t1

MGKKRVMVPAKDVDLSSIKYEPEIVQAPHLTGFWFRFFVRLIEAPLIGPFLLTMLKKENKIDQLLRNTVFPEEPMFKPEYPPQEKEHSVVELDEDGRPEGRVESALNCLPHYDPAKLWENSSAPFRYWKIRDYAYAYQSRKVTPSMVAERIISIIEENGIDKPPSPLLLSFDAAEVRKQAAASTQRFESGNPLSILDGIFIAIKDDIDCHPHPSTGGSTWMHEVRDVKMDAVCVSRLRSCGVIFIGKTNMHEFGMGTTGNNSNYGTARNPHAPDRYTGGSSSGPAAIVASGLCSAALGTDGGGSVRIPSSLCGVVGLKINYGRTSMQGSLCDSGTVEVIGPIASTVEDAMLVYAAMLGASPANRISMKPSTPCLPTLSSDDDTDALRSLRIGIYTPWFNNVHSTEVSDKCEDALNLLTKAHGCEVVEVVIPEILEMRTAHLVSIGSECLSSLNPDIEDGKGVKLSYDTRTSLALFQSFTAADYVAAQCIRRRIMHYFMEIFKKVDVIVTPTTGMTAPRIPPSALKSGETDMPTTGYLMRFVVPANLLGLPAISVPVGYDKEGLPIGLQVIGRPWAEATILRVAAAVEKLCGESKRRPLTYYDVLGAN