Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012819.t1 | XP_003603139.1 | 91.1 | 606 | 53 | 1 | 1 | 606 | 1 | 605 | 1.10E-228 | 802.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012819.t1 | Q96AE4 | 32.0 | 247 | 146 | 7 | 29 | 263 | 33 | 269 | 1.9e-22 | 109.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012819.t1 | G7J7L9 | 91.1 | 606 | 53 | 1 | 1 | 606 | 1 | 605 | 8.2e-229 | 802.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012819 | MS.gene03206 | PPI |
| MS.gene02577 | MS.gene012819 | PPI |
| MS.gene012819 | MS.gene013791 | PPI |
| MS.gene73791 | MS.gene012819 | PPI |
| MS.gene46269 | MS.gene012819 | PPI |
| MS.gene73790 | MS.gene012819 | PPI |
| MS.gene46271 | MS.gene012819 | PPI |
| MS.gene013796 | MS.gene012819 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012819.t1 | MTR_3g104280 | 96.700 | 606 | 19 | 1 | 1 | 606 | 1 | 605 | 0.0 | 1120 |
| MS.gene012819.t1 | MTR_3g104270 | 96.535 | 606 | 20 | 1 | 1 | 606 | 1 | 605 | 0.0 | 1118 |
| MS.gene012819.t1 | MTR_1g016760 | 62.969 | 640 | 142 | 18 | 1 | 588 | 1 | 597 | 0.0 | 593 |
| MS.gene012819.t1 | MTR_5g008420 | 41.811 | 519 | 224 | 24 | 82 | 564 | 181 | 657 | 4.19e-70 | 241 |
| MS.gene012819.t1 | MTR_1g090773 | 29.187 | 209 | 117 | 6 | 89 | 283 | 39 | 230 | 1.69e-11 | 66.2 |
| MS.gene012819.t1 | MTR_7g010340 | 28.015 | 539 | 259 | 27 | 68 | 561 | 95 | 549 | 2.33e-11 | 67.0 |
| MS.gene012819.t1 | MTR_7g010340 | 28.015 | 539 | 259 | 27 | 68 | 561 | 79 | 533 | 2.58e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012819.t1 | AT2G25970 | 53.010 | 598 | 182 | 27 | 26 | 587 | 66 | 600 | 2.45e-128 | 391 |
| MS.gene012819.t1 | AT4G10070 | 43.972 | 282 | 127 | 10 | 82 | 349 | 172 | 436 | 2.09e-53 | 194 |
| MS.gene012819.t1 | AT1G33680 | 36.711 | 523 | 233 | 26 | 86 | 574 | 232 | 690 | 2.74e-53 | 195 |
| MS.gene012819.t1 | AT5G04430 | 30.769 | 208 | 124 | 7 | 89 | 289 | 38 | 232 | 4.78e-14 | 74.3 |
| MS.gene012819.t1 | AT5G04430 | 31.548 | 168 | 102 | 4 | 89 | 253 | 38 | 195 | 2.90e-12 | 68.6 |
Find 232 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTAGGTTGGCCTTATAAT+TGG | 0.202642 | 3.3:-85823801 | MS.gene012819:intron |
| GGTAGGGTTGGTGTTCTTAT+TGG | 0.218158 | 3.3:-85825092 | MS.gene012819:CDS |
| CAGTAGTGGGTTGGGAAGTT+TGG | 0.232400 | 3.3:+85821890 | None:intergenic |
| GACTAGGATGGTTGAACTTA+TGG | 0.236098 | 3.3:-85824979 | MS.gene012819:CDS |
| CAGAATCGTCTCAGAAATTC+AGG | 0.249484 | 3.3:-85822462 | MS.gene012819:CDS |
| AGTAGTGGGTTGGGAAGTTT+GGG | 0.253746 | 3.3:+85821891 | None:intergenic |
| AGTGCAAATCCACCTGTTTA+TGG | 0.260187 | 3.3:-85821724 | MS.gene012819:CDS |
| CTCCTCCTTTACCAATTATA+AGG | 0.261517 | 3.3:+85823790 | None:intergenic |
| TAGGCTGAAGCTGGGGCTTC+TGG | 0.266896 | 3.3:-85823985 | MS.gene012819:CDS |
| AGTTGGAAGCGTGCCCTTCT+TGG | 0.286199 | 3.3:+85821935 | None:intergenic |
| GGTTGGTAGCATAGCCTTGC+TGG | 0.287848 | 3.3:+85821863 | None:intergenic |
| ATTACTCCCACTGCCATAAC+TGG | 0.291727 | 3.3:+85821963 | None:intergenic |
| TTCTACCGGAGCACGAATTC+AGG | 0.305971 | 3.3:-85823745 | MS.gene012819:intron |
| AGACGGATGGTTGCACAATC+TGG | 0.309169 | 3.3:-85823952 | MS.gene012819:CDS |
| ACCATCCTAGTCTGAGAATT+AGG | 0.309685 | 3.3:+85824990 | None:intergenic |
| CATCCCCACACCTTATTGTT+TGG | 0.311267 | 3.3:+85823904 | None:intergenic |
| CTTTCTGTTGATGTATCACC+TGG | 0.313635 | 3.3:+85823537 | None:intergenic |
| GAAGGGCACGCTTCCAACTA+TGG | 0.327467 | 3.3:-85821931 | MS.gene012819:CDS |
| TTTGCTGTTGCTGGGGTTGT+TGG | 0.358645 | 3.3:+85822175 | None:intergenic |
| TCATATGGAAATAGTTCTTA+TGG | 0.360383 | 3.3:-85821514 | MS.gene012819:CDS |
| GTTATCGGACTTGGTTCGTT+TGG | 0.360575 | 3.3:+85825214 | None:intergenic |
| AACTTCTTGAGCTCGTTGTT+TGG | 0.361408 | 3.3:+85825286 | None:intergenic |
| GAAGCTGGGGCTTCTGGCGG+TGG | 0.361827 | 3.3:-85823979 | MS.gene012819:CDS |
| TTTGCTGATTCAATTTGATC+AGG | 0.363459 | 3.3:+85823492 | None:intergenic |
| GATTCAAGTTACTCGTGATA+TGG | 0.369842 | 3.3:-85825021 | MS.gene012819:CDS |
| TTTATTAACTAGGCTGAAGC+TGG | 0.373039 | 3.3:-85823994 | MS.gene012819:intron |
| TTATGGTGCTGGTTATGTTC+AGG | 0.375380 | 3.3:-85821497 | MS.gene012819:CDS |
| GATGCAAATACCAAACAATA+AGG | 0.377129 | 3.3:-85823914 | MS.gene012819:intron |
| TTATCGGACTTGGTTCGTTT+GGG | 0.378392 | 3.3:+85825215 | None:intergenic |
| GAGTTCGATGTCCGTGGCGG+TGG | 0.387307 | 3.3:+85825322 | None:intergenic |
| CCGGTGGATATTCCACCAAC+TGG | 0.387764 | 3.3:-85822260 | MS.gene012819:CDS |
| AATGCGCAACAACAACAATC+TGG | 0.391525 | 3.3:-85822036 | MS.gene012819:CDS |
| TGTTGCTGATCATATGTTTG+TGG | 0.391746 | 3.3:+85822003 | None:intergenic |
| GCTGAGCATACCCGGAAGGC+GGG | 0.392161 | 3.3:+85821638 | None:intergenic |
| GGTCCTTCACAGCCAGCTGA+TGG | 0.395783 | 3.3:-85822144 | MS.gene012819:CDS |
| GGCCAGACTCCGCCGTCATA+TGG | 0.396618 | 3.3:-85821529 | MS.gene012819:CDS |
| CATAGGCCACTTGGGAGGTA+GGG | 0.396819 | 3.3:+85821806 | None:intergenic |
| GTTGGTGTTCTTATTGGTAA+AGG | 0.399271 | 3.3:-85825086 | MS.gene012819:CDS |
| TGGAGCACCGTTATCGGACT+TGG | 0.399369 | 3.3:+85825205 | None:intergenic |
| CCCCAGCAACAGCAAAATCC+TGG | 0.404109 | 3.3:-85822168 | MS.gene012819:CDS |
| TTCCATATGACGGCGGAGTC+TGG | 0.406065 | 3.3:+85821527 | None:intergenic |
| AGTCAACCACAGTCTGGTTA+TGG | 0.407882 | 3.3:-85821781 | MS.gene012819:CDS |
| GTTGGAAGCGTGCCCTTCTT+GGG | 0.411122 | 3.3:+85821936 | None:intergenic |
| TATGATCAGCAACAAGGTTA+TGG | 0.411167 | 3.3:-85821994 | MS.gene012819:CDS |
| CAAGGTGGCCAGCCTGGCTA+TGG | 0.413475 | 3.3:-85821550 | MS.gene012819:CDS |
| AATCCCGACCACCGTCTAGC+TGG | 0.415564 | 3.3:-85822407 | MS.gene012819:CDS |
| ACTAGGATGGTTGAACTTAT+GGG | 0.418819 | 3.3:-85824978 | MS.gene012819:CDS |
| TATGGCTCTGCTCCCAGTTA+TGG | 0.425707 | 3.3:-85821976 | MS.gene012819:CDS |
| AGCCAACCAGGACAGGGTTA+TGG | 0.429254 | 3.3:-85822081 | MS.gene012819:CDS |
| CTGGTTGAGGAGTTCCTTGT+TGG | 0.431801 | 3.3:+85821842 | None:intergenic |
| GAAGCGTGCCCTTCTTGGGT+TGG | 0.433826 | 3.3:+85821940 | None:intergenic |
| TGGTTATAGCCAACCAGGAC+AGG | 0.437107 | 3.3:-85822088 | MS.gene012819:CDS |
| TAGTGGGTTGGGAAGTTTGG+GGG | 0.438776 | 3.3:+85821893 | None:intergenic |
| CTGGGCAACAGTAGTGGGTT+GGG | 0.439592 | 3.3:+85821882 | None:intergenic |
| GCTTGTTGCACAGGAGCAGC+AGG | 0.441689 | 3.3:+85822378 | None:intergenic |
| GCTCCTCAAGGTGGCCAGCC+TGG | 0.443253 | 3.3:-85821556 | MS.gene012819:CDS |
| TCTTGACCATAACCCTGTCC+TGG | 0.444195 | 3.3:+85822075 | None:intergenic |
| CGATTGTGGAGCACCGTTAT+CGG | 0.444219 | 3.3:+85825199 | None:intergenic |
| GACGGATGGTTGCACAATCT+GGG | 0.446354 | 3.3:-85823951 | MS.gene012819:CDS |
| CGATAACGGTGCTCCACAAT+CGG | 0.446619 | 3.3:-85825198 | MS.gene012819:CDS |
| AGCCCAGCTAGACGGTGGTC+GGG | 0.454864 | 3.3:+85822404 | None:intergenic |
| AGTGGGTTGGGAAGTTTGGG+GGG | 0.456628 | 3.3:+85821894 | None:intergenic |
| GTCCTTCACAGCCAGCTGAT+GGG | 0.456888 | 3.3:-85822143 | MS.gene012819:CDS |
| TGAGCATACCCGGAAGGCGG+GGG | 0.460955 | 3.3:+85821640 | None:intergenic |
| AGCTAGACGGTGGTCGGGAT+TGG | 0.461750 | 3.3:+85822409 | None:intergenic |
| CCTACCTCCCAAGTGGCCTA+TGG | 0.463092 | 3.3:-85821805 | MS.gene012819:CDS |
| AATTGAATCAGCAAAGCAAT+TGG | 0.464801 | 3.3:-85823484 | MS.gene012819:CDS |
| AAGTATCTTCAGATGCAATC+TGG | 0.464861 | 3.3:-85825050 | MS.gene012819:CDS |
| CCTGTGCAACAAGCTGGTTA+TGG | 0.465420 | 3.3:-85822369 | MS.gene012819:CDS |
| AGAACACCAACCCTACCATT+AGG | 0.466222 | 3.3:+85825098 | None:intergenic |
| GTTGACTTCCATAGGCCACT+TGG | 0.466366 | 3.3:+85821797 | None:intergenic |
| TACAGTCAACCTCCTTCCTC+TGG | 0.467231 | 3.3:-85822108 | MS.gene012819:CDS |
| GATAACGGTGCTCCACAATC+GGG | 0.467332 | 3.3:-85825197 | MS.gene012819:CDS |
| GGAAATAGTTCTTATGGTGC+TGG | 0.472518 | 3.3:-85821508 | MS.gene012819:CDS |
| TTGCTGATTCAATTTGATCA+GGG | 0.472599 | 3.3:+85823493 | None:intergenic |
| TCGCAGCAAGGTGGTAGTTA+TGG | 0.474269 | 3.3:-85825143 | MS.gene012819:CDS |
| CCATAGGCCACTTGGGAGGT+AGG | 0.475564 | 3.3:+85821805 | None:intergenic |
| AAGAAGATTGAAATACCTAA+TGG | 0.476293 | 3.3:-85825113 | MS.gene012819:CDS |
| GTTGGCCTTATAATTGGTAA+AGG | 0.477296 | 3.3:-85823795 | MS.gene012819:CDS |
| GGCGGAGTCTGGCCATAGCC+AGG | 0.479964 | 3.3:+85821538 | None:intergenic |
| GACCCATCAGCTGGCTGTGA+AGG | 0.481746 | 3.3:+85822141 | None:intergenic |
| GGTTATGGCTATGGGCAACC+TGG | 0.488138 | 3.3:-85822354 | MS.gene012819:CDS |
| GAGTCTGGCCATAGCCAGGC+TGG | 0.490778 | 3.3:+85821542 | None:intergenic |
| CAACAAGCTGGTTATGGCTA+TGG | 0.490845 | 3.3:-85822363 | MS.gene012819:CDS |
| AACTGCACAGGTTGTTCCAC+AGG | 0.491454 | 3.3:-85821449 | MS.gene012819:CDS |
| CCATAACCAGCTTGTTGCAC+AGG | 0.496256 | 3.3:+85822369 | None:intergenic |
| GGCTGAGCATACCCGGAAGG+CGG | 0.497089 | 3.3:+85821637 | None:intergenic |
| CTTCTGGCGGTGGCACTAGA+CGG | 0.497957 | 3.3:-85823969 | MS.gene012819:CDS |
| GATGGACCAGAGTATGATCC+AGG | 0.501151 | 3.3:+85822336 | None:intergenic |
| CCAGTTGGTGGAATATCCAC+CGG | 0.501220 | 3.3:+85822260 | None:intergenic |
| TTCTGTTGATGTATCACCTG+GGG | 0.507849 | 3.3:+85823539 | None:intergenic |
| GTAGTGGGTTGGGAAGTTTG+GGG | 0.508308 | 3.3:+85821892 | None:intergenic |
| CCCAGCAACAGCAAAATCCT+GGG | 0.508607 | 3.3:-85822167 | MS.gene012819:CDS |
| GTTGGTAGCATAGCCTTGCT+GGG | 0.508853 | 3.3:+85821864 | None:intergenic |
| GGTGAGATGGTGCAGTGGAT+TGG | 0.508922 | 3.3:+85822235 | None:intergenic |
| CCTAGCACAGCAGGAGGCTA+TGG | 0.510304 | 3.3:-85821688 | MS.gene012819:CDS |
| CTGCTCCCAGTTATGGCAGT+GGG | 0.512052 | 3.3:-85821969 | MS.gene012819:CDS |
| GACTGTGATTGACCATAAAC+AGG | 0.513068 | 3.3:+85821712 | None:intergenic |
| TATGGAAGTCAACCACAGTC+TGG | 0.513429 | 3.3:-85821787 | MS.gene012819:CDS |
| CCATAGCCTCCTGCTGTGCT+AGG | 0.513919 | 3.3:+85821688 | None:intergenic |
| TGCTGATTCAATTTGATCAG+GGG | 0.517465 | 3.3:+85823494 | None:intergenic |
| TAACTCTGGCTGAGCATACC+CGG | 0.518719 | 3.3:+85821630 | None:intergenic |
| GCTGCTCCTGTGCAACAAGC+TGG | 0.519086 | 3.3:-85822375 | MS.gene012819:CDS |
| CTTGGTTCGTTTGGGATCGT+AGG | 0.519590 | 3.3:+85825223 | None:intergenic |
| GAAATACCTAATGGTAGGGT+TGG | 0.520361 | 3.3:-85825104 | MS.gene012819:CDS |
| TCACAGTCACCTAGCACAGC+AGG | 0.521102 | 3.3:-85821697 | MS.gene012819:CDS |
| GCTCTCTGAGTGCCTAACTC+TGG | 0.522190 | 3.3:+85821616 | None:intergenic |
| TCAGCAGAAGAAACAGCGTC+AGG | 0.524572 | 3.3:+85824951 | None:intergenic |
| GACCATAACCCTGTCCTGGT+TGG | 0.526303 | 3.3:+85822079 | None:intergenic |
| TTGACTTCCATAGGCCACTT+GGG | 0.528190 | 3.3:+85821798 | None:intergenic |
| GCCTTGCTGGGCAACAGTAG+TGG | 0.528254 | 3.3:+85821876 | None:intergenic |
| GCACCAGTGCAACCAGGGTA+TGG | 0.529757 | 3.3:-85821595 | MS.gene012819:CDS |
| ATCTGCTTGTGATCCATAGT+TGG | 0.529858 | 3.3:+85821918 | None:intergenic |
| AGTTCGATGTCCGTGGCGGT+GGG | 0.530955 | 3.3:+85825323 | None:intergenic |
| ATCCCGACCACCGTCTAGCT+GGG | 0.531596 | 3.3:-85822406 | MS.gene012819:CDS |
| ATAGGCCACTTGGGAGGTAG+GGG | 0.532008 | 3.3:+85821807 | None:intergenic |
| TATCCACCGGGTTGCTGAGG+AGG | 0.532429 | 3.3:+85822273 | None:intergenic |
| GGGAGTAATCCAACCCAAGA+AGG | 0.532914 | 3.3:-85821949 | MS.gene012819:CDS |
| GAGCCCAGCTAGACGGTGGT+CGG | 0.534258 | 3.3:+85822403 | None:intergenic |
| GAGGGAGGAGCACCATAGCT+AGG | 0.535314 | 3.3:+85821757 | None:intergenic |
| GGTGTTCTTATTGGTAAAGG+AGG | 0.535918 | 3.3:-85825083 | MS.gene012819:CDS |
| GCTGAAGCTGGGGCTTCTGG+CGG | 0.536744 | 3.3:-85823982 | MS.gene012819:CDS |
| AACAAGCTGGTTATGGCTAT+GGG | 0.538613 | 3.3:-85822362 | MS.gene012819:CDS |
| GCAGGAGGAGCCCAGCTAGA+CGG | 0.538714 | 3.3:+85822396 | None:intergenic |
| CACCAGCAGTCTACTCATGC+AGG | 0.540059 | 3.3:-85822216 | MS.gene012819:CDS |
| TAAACAGGTGGATTTGCACT+TGG | 0.540765 | 3.3:+85821727 | None:intergenic |
| GGGTATGCTCAGCCAGAGTT+AGG | 0.541597 | 3.3:-85821628 | MS.gene012819:CDS |
| TTATTAACTAGGCTGAAGCT+GGG | 0.541792 | 3.3:-85823993 | MS.gene012819:intron |
| TCTGCTCCCAGTTATGGCAG+TGG | 0.543356 | 3.3:-85821970 | MS.gene012819:CDS |
| ATGCCTCAGCCACCATATGC+AGG | 0.544233 | 3.3:-85822300 | MS.gene012819:CDS |
| GCTGGGCAACAGTAGTGGGT+TGG | 0.546458 | 3.3:+85821881 | None:intergenic |
| CTGAGCATACCCGGAAGGCG+GGG | 0.547333 | 3.3:+85821639 | None:intergenic |
| GCTCGTCTTCTCAGCGTCAC+CGG | 0.548114 | 3.3:-85825260 | MS.gene012819:CDS |
| TTTCTGTTGATGTATCACCT+GGG | 0.548846 | 3.3:+85823538 | None:intergenic |
| CTGATCCTAATTCTCAGACT+AGG | 0.549418 | 3.3:-85824995 | MS.gene012819:CDS |
| TGAGGAGGATAGCCTGCATA+TGG | 0.549695 | 3.3:+85822288 | None:intergenic |
| CAGAGAGCACCAGTGCAACC+AGG | 0.550434 | 3.3:-85821601 | MS.gene012819:CDS |
| TTGAGGAGTTCCTTGTTGGT+TGG | 0.551933 | 3.3:+85821846 | None:intergenic |
| AAGAGTATGCAAGCTTCTAC+CGG | 0.552343 | 3.3:-85823759 | MS.gene012819:CDS |
| TAGCCTGCATATGGTGGCTG+AGG | 0.553849 | 3.3:+85822297 | None:intergenic |
| ATGCGCAACAACAACAATCT+GGG | 0.554757 | 3.3:-85822035 | MS.gene012819:CDS |
| GGACCATACCCTGGTTGCAC+TGG | 0.555058 | 3.3:+85821592 | None:intergenic |
| GGCTATCCTCCTCAGCAACC+CGG | 0.555442 | 3.3:-85822279 | MS.gene012819:CDS |
| AGTGGATTGGTCCCAGTTGG+TGG | 0.555514 | 3.3:+85822248 | None:intergenic |
| AGATTGAAATACCTAATGGT+AGG | 0.556097 | 3.3:-85825109 | MS.gene012819:CDS |
| AAACGAACCAAGTCCGATAA+CGG | 0.556846 | 3.3:-85825212 | MS.gene012819:CDS |
| TAGCCAGGCTGGCCACCTTG+AGG | 0.557256 | 3.3:+85821553 | None:intergenic |
| TTGGTTAATCAAATCCTCAC+TGG | 0.558998 | 3.3:-85823465 | MS.gene012819:CDS |
| TCCTCTGGTTATAGCCAACC+AGG | 0.559096 | 3.3:-85822093 | MS.gene012819:CDS |
| CAATCATACGGTGCTCCTCA+AGG | 0.564374 | 3.3:-85821568 | MS.gene012819:CDS |
| CTCAGAAATTCAGGGAACTC+AGG | 0.566464 | 3.3:-85822453 | MS.gene012819:CDS |
| GAGAACCTGAATTCGTGCTC+CGG | 0.566604 | 3.3:+85823740 | None:intergenic |
| GCTCCATCGCTAGCATACGC+TGG | 0.567046 | 3.3:+85821472 | None:intergenic |
| GCTACTGCATAACCTGGTTG+AGG | 0.568505 | 3.3:+85821829 | None:intergenic |
| TCTGGTTATGGACCTAGCTA+TGG | 0.569183 | 3.3:-85821769 | MS.gene012819:CDS |
| CTGTATGCAGACCCATCAGC+TGG | 0.570591 | 3.3:+85822132 | None:intergenic |
| TAAGAATCAAACCCCGATTG+TGG | 0.574402 | 3.3:+85825185 | None:intergenic |
| GGGTATGGTCCGCAATCATA+CGG | 0.574711 | 3.3:-85821580 | MS.gene012819:CDS |
| GGCCTTATAATTGGTAAAGG+AGG | 0.574874 | 3.3:-85823792 | MS.gene012819:CDS |
| GTAGGAGAGTGGTGGAGCGC+CGG | 0.574920 | 3.3:+85825241 | None:intergenic |
| CCTTGCTGGGCAACAGTAGT+GGG | 0.574987 | 3.3:+85821877 | None:intergenic |
| AGAATCGTCTCAGAAATTCA+GGG | 0.575702 | 3.3:-85822461 | MS.gene012819:CDS |
| TGCAGTGGATTGGTCCCAGT+TGG | 0.578827 | 3.3:+85822245 | None:intergenic |
| TAGCGATGGAGCAACTGCAC+AGG | 0.579113 | 3.3:-85821461 | MS.gene012819:CDS |
| GCTCCAGCGTATGCTAGCGA+TGG | 0.580238 | 3.3:-85821475 | MS.gene012819:CDS |
| GGCATGTTATACTGCGGTGA+TGG | 0.581623 | 3.3:+85822318 | None:intergenic |
| GATTGAAATACCTAATGGTA+GGG | 0.585821 | 3.3:-85825108 | MS.gene012819:CDS |
| CGGTGGATATTCCACCAACT+GGG | 0.586403 | 3.3:-85822259 | MS.gene012819:CDS |
| TGTTGCACAGGAGCAGCAGG+AGG | 0.586770 | 3.3:+85822381 | None:intergenic |
| CAACAACAACAATCTGGGTA+TGG | 0.587718 | 3.3:-85822030 | MS.gene012819:CDS |
| GGGCAACCTGGATCATACTC+TGG | 0.588895 | 3.3:-85822342 | MS.gene012819:CDS |
| TGGCGGTGGCACTAGACGGA+TGG | 0.589779 | 3.3:-85823965 | MS.gene012819:CDS |
| GAATATCCACCGGGTTGCTG+AGG | 0.591522 | 3.3:+85822270 | None:intergenic |
| CCCACTACTGTTGCCCAGCA+AGG | 0.593544 | 3.3:-85821877 | MS.gene012819:CDS |
| TTACTCCCACTGCCATAACT+GGG | 0.595665 | 3.3:+85821964 | None:intergenic |
| CGTTTGGGATCGTAGGAGAG+TGG | 0.599323 | 3.3:+85825230 | None:intergenic |
| ACGGATGGTTGCACAATCTG+GGG | 0.600123 | 3.3:-85823950 | MS.gene012819:CDS |
| CACCTGCATGAGTAGACTGC+TGG | 0.604282 | 3.3:+85822214 | None:intergenic |
| CAGTTGGTGGAATATCCACC+GGG | 0.607367 | 3.3:+85822261 | None:intergenic |
| TAAGAACTATTTCCATATGA+CGG | 0.608805 | 3.3:+85821517 | None:intergenic |
| TCCTAATTCTCAGACTAGGA+TGG | 0.609354 | 3.3:-85824991 | MS.gene012819:CDS |
| TGAGTAGACTGCTGGTGAGA+TGG | 0.609532 | 3.3:+85822222 | None:intergenic |
| GGTTATAGCCAACCAGGACA+GGG | 0.609709 | 3.3:-85822087 | MS.gene012819:CDS |
| CCACCTTGCTGCGAGTATTG+CGG | 0.611213 | 3.3:+85825152 | None:intergenic |
| GGAGTAATCCAACCCAAGAA+GGG | 0.613412 | 3.3:-85821948 | MS.gene012819:CDS |
| CATCAATGAAGTCCTTGCTG+AGG | 0.616712 | 3.3:-85824922 | MS.gene012819:intron |
| TTGGGATCGTAGGAGAGTGG+TGG | 0.618282 | 3.3:+85825233 | None:intergenic |
| GGAGGAGCCCAGCTAGACGG+TGG | 0.623688 | 3.3:+85822399 | None:intergenic |
| AGACTGTGGTTGACTTCCAT+AGG | 0.624998 | 3.3:+85821789 | None:intergenic |
| TAATCAAATCCTCACTGGTG+AGG | 0.625790 | 3.3:-85823460 | MS.gene012819:intron |
| CAACAAGGAACTCCTCAACC+AGG | 0.626608 | 3.3:-85821841 | MS.gene012819:CDS |
| TCTGTTGATGTATCACCTGG+GGG | 0.627155 | 3.3:+85823540 | None:intergenic |
| GGTTATGGTCAAGAAAGCTA+TGG | 0.629248 | 3.3:-85822066 | MS.gene012819:CDS |
| TATGATTGCGGACCATACCC+TGG | 0.630591 | 3.3:+85821583 | None:intergenic |
| TCCTGGTTGGCTATAACCAG+AGG | 0.630777 | 3.3:+85822092 | None:intergenic |
| GGAGGATAGCCTGCATATGG+TGG | 0.632205 | 3.3:+85822291 | None:intergenic |
| GTAGGGGCTACTGCATAACC+TGG | 0.633003 | 3.3:+85821823 | None:intergenic |
| ACTGCACAGGTTGTTCCACA+GGG | 0.634943 | 3.3:-85821448 | MS.gene012819:CDS |
| GACTTCGAGTTCGATGTCCG+TGG | 0.636506 | 3.3:+85825316 | None:intergenic |
| GGCTATGCTACCAACCAACA+AGG | 0.638622 | 3.3:-85821856 | MS.gene012819:CDS |
| TGAGGAGCACCGTATGATTG+CGG | 0.639312 | 3.3:+85821571 | None:intergenic |
| CAAACATATGATCAGCAACA+AGG | 0.642194 | 3.3:-85822000 | MS.gene012819:CDS |
| TATTAACTAGGCTGAAGCTG+GGG | 0.642830 | 3.3:-85823992 | MS.gene012819:intron |
| TCAGGTGGCTATACTCAGCA+AGG | 0.643161 | 3.3:-85822435 | MS.gene012819:CDS |
| CGATGAACAACCCACCGCCA+CGG | 0.645490 | 3.3:-85825333 | MS.gene012819:CDS |
| AAGCCGCAATACTCGCAGCA+AGG | 0.647111 | 3.3:-85825155 | MS.gene012819:CDS |
| AGAGAGCACCAGTGCAACCA+GGG | 0.650050 | 3.3:-85821600 | MS.gene012819:CDS |
| GGTTGGCTATAACCAGAGGA+AGG | 0.652858 | 3.3:+85822096 | None:intergenic |
| TGGCTATAACCAGAGGAAGG+AGG | 0.658440 | 3.3:+85822099 | None:intergenic |
| AGAAATTCAGGGAACTCAGG+TGG | 0.658761 | 3.3:-85822450 | MS.gene012819:CDS |
| TCTGGCTGAGCATACCCGGA+AGG | 0.665619 | 3.3:+85821634 | None:intergenic |
| CGGATGGTTGCACAATCTGG+GGG | 0.666739 | 3.3:-85823949 | MS.gene012819:CDS |
| CCAGCAACAGCAAAATCCTG+GGG | 0.670269 | 3.3:-85822166 | MS.gene012819:CDS |
| CAGTCACCTAGCACAGCAGG+AGG | 0.674325 | 3.3:-85821694 | MS.gene012819:CDS |
| TTCGAGTTCGATGTCCGTGG+CGG | 0.677834 | 3.3:+85825319 | None:intergenic |
| CAGCAGTCTACTCATGCAGG+TGG | 0.682332 | 3.3:-85822213 | MS.gene012819:CDS |
| CTGCTGGTGAGATGGTGCAG+TGG | 0.682356 | 3.3:+85822230 | None:intergenic |
| ACTTCCATAGGCCACTTGGG+AGG | 0.683615 | 3.3:+85821801 | None:intergenic |
| AGTAGCCCCTACCTCCCAAG+TGG | 0.685782 | 3.3:-85821812 | MS.gene012819:CDS |
| ATAACGGTGCTCCACAATCG+GGG | 0.686584 | 3.3:-85825196 | MS.gene012819:CDS |
| ACTTTAGCAACACCGCCCTG+TGG | 0.690074 | 3.3:+85821433 | None:intergenic |
| CCGCAATACTCGCAGCAAGG+TGG | 0.697265 | 3.3:-85825152 | MS.gene012819:CDS |
| TGTGATTGACCATAAACAGG+TGG | 0.715400 | 3.3:+85821715 | None:intergenic |
| TATCCTCCTCAGCAACCCGG+TGG | 0.720805 | 3.3:-85822276 | MS.gene012819:CDS |
| CTAGGTCCATAACCAGACTG+TGG | 0.724556 | 3.3:+85821775 | None:intergenic |
| GCACAGGTTGTTCCACAGGG+CGG | 0.727527 | 3.3:-85821445 | MS.gene012819:CDS |
| GGTGACGCTGAGAAGACGAG+CGG | 0.728767 | 3.3:+85825262 | None:intergenic |
| GAACTATTTCCATATGACGG+CGG | 0.728848 | 3.3:+85821520 | None:intergenic |
| CAGCAACAGCAAAATCCTGG+GGG | 0.736266 | 3.3:-85822165 | MS.gene012819:CDS |
| TCATACGGTGCTCCTCAAGG+TGG | 0.736772 | 3.3:-85821565 | MS.gene012819:CDS |
| GGCTGAGGCATGTTATACTG+CGG | 0.750903 | 3.3:+85822312 | None:intergenic |
| GATAACATACCTCACCAGTG+AGG | 0.751081 | 3.3:+85823451 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTATGACTAATTTTTAT+TGG | - | chr3.3:85824175-85824194 | MS.gene012819:intron | 10.0% |
| !!! | CTTTTTTAAGTTTAAAATTA+TGG | - | chr3.3:85823417-85823436 | MS.gene012819:intron | 10.0% |
| !!! | TTTTAAACTTAAAAAAGATT+TGG | + | chr3.3:85823414-85823433 | None:intergenic | 10.0% |
| !! | AAATTCACTTTCAATTATAA+TGG | - | chr3.3:85823956-85823975 | MS.gene012819:CDS | 15.0% |
| !!! | AAAAGGTCAATAATTTTATA+AGG | + | chr3.3:85823499-85823518 | None:intergenic | 15.0% |
| !!! | AAAATGAATAACAATTTTGT+AGG | + | chr3.3:85823532-85823551 | None:intergenic | 15.0% |
| !!! | TTTTTTTATACTCTTGTTTA+CGG | - | chr3.3:85821896-85821915 | MS.gene012819:CDS | 15.0% |
| !! | AAAGAACATTAAAAATCGAT+GGG | - | chr3.3:85823273-85823292 | MS.gene012819:intron | 20.0% |
| !! | ATTGAAAGTGAATTTAACAT+AGG | + | chr3.3:85823951-85823970 | None:intergenic | 20.0% |
| !! | TAATCAATGATATTTCACTA+AGG | + | chr3.3:85822091-85822110 | None:intergenic | 20.0% |
| !! | TATATTATAGTTACAGAATC+AGG | + | chr3.3:85822692-85822711 | None:intergenic | 20.0% |
| !! | TTTAATCGTAAAACTAAACA+TGG | + | chr3.3:85823451-85823470 | None:intergenic | 20.0% |
| !!! | ACACATTTTTTTGTTTTATC+TGG | - | chr3.3:85823364-85823383 | MS.gene012819:intron | 20.0% |
| !!! | CTAATATCATCAATTTTTTC+AGG | - | chr3.3:85823211-85823230 | MS.gene012819:intron | 20.0% |
| !!! | CTTCGTATATTTTTATGTTT+TGG | - | chr3.3:85824256-85824275 | MS.gene012819:intron | 20.0% |
| !!! | TGAAATACATTTTTACTAAC+AGG | + | chr3.3:85822584-85822603 | None:intergenic | 20.0% |
| !!! | TTAAAGTATTTCTTATCGTT+GGG | - | chr3.3:85823849-85823868 | MS.gene012819:intron | 20.0% |
| !!! | TTTTATTTCATAGTTTGTTG+AGG | - | chr3.3:85824003-85824022 | MS.gene012819:intron | 20.0% |
| ! | AAGAAGATTGAAATACCTAA+TGG | - | chr3.3:85821678-85821697 | MS.gene012819:CDS | 25.0% |
| ! | AGAATTGTTTCAATGTACTT+GGG | - | chr3.3:85824060-85824079 | MS.gene012819:intron | 25.0% |
| ! | GAAAGAACATTAAAAATCGA+TGG | - | chr3.3:85823272-85823291 | MS.gene012819:intron | 25.0% |
| ! | GTGATTTCAAAACATGAATT+GGG | + | chr3.3:85822057-85822076 | None:intergenic | 25.0% |
| ! | TAAAAAAAAAAACCTCAGCA+AGG | + | chr3.3:85821884-85821903 | None:intergenic | 25.0% |
| ! | TAAAATTAGACAACACTTTG+AGG | - | chr3.3:85823717-85823736 | MS.gene012819:intron | 25.0% |
| ! | TAAATATGCTCAAATGATGT+TGG | - | chr3.3:85822726-85822745 | MS.gene012819:intron | 25.0% |
| ! | TAAGAACTATTTCCATATGA+CGG | + | chr3.3:85825277-85825296 | None:intergenic | 25.0% |
| ! | TACTCAAATGATGTTCAAAT+TGG | - | chr3.3:85822202-85822221 | MS.gene012819:CDS | 25.0% |
| ! | TCAACAAGTCAAAATTCAAA+AGG | + | chr3.3:85823681-85823700 | None:intergenic | 25.0% |
| ! | TCATATGGAAATAGTTCTTA+TGG | - | chr3.3:85825277-85825296 | MS.gene012819:CDS | 25.0% |
| !! | CTAATTTTTATTGGCATCAA+CGG | - | chr3.3:85824184-85824203 | MS.gene012819:intron | 25.0% |
| !! | CTTAAAGTATTTCTTATCGT+TGG | - | chr3.3:85823848-85823867 | MS.gene012819:intron | 25.0% |
| !! | TAATTTTTATTGGCATCAAC+GGG | - | chr3.3:85824185-85824204 | MS.gene012819:intron | 25.0% |
| !!! | ATACGTGTTGTTTATTAACT+AGG | - | chr3.3:85822787-85822806 | MS.gene012819:intron | 25.0% |
| !!! | ATTTTTATGTTTTGGTACGT+TGG | - | chr3.3:85824264-85824283 | MS.gene012819:intron | 25.0% |
| !!! | CAAAGTGTTGTCTAATTTTA+TGG | + | chr3.3:85823717-85823736 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTTATTCTCGTTT+GGG | - | chr3.3:85822944-85822963 | MS.gene012819:intron | 25.0% |
| !!! | TTTATCTGGCTTATCATTTT+TGG | - | chr3.3:85823378-85823397 | MS.gene012819:intron | 25.0% |
| !!! | TTTTTATGTTTTGGTACGTT+GGG | - | chr3.3:85824265-85824284 | MS.gene012819:intron | 25.0% |
| AAATACCAAACAATAAGGTG+TGG | - | chr3.3:85822882-85822901 | MS.gene012819:intron | 30.0% | |
| AATACCAAACAATAAGGTGT+GGG | - | chr3.3:85822883-85822902 | MS.gene012819:intron | 30.0% | |
| AATAGATGTACACACAAAAC+GGG | + | chr3.3:85824235-85824254 | None:intergenic | 30.0% | |
| AATCGACAGAAATACACAAA+TGG | + | chr3.3:85823811-85823830 | None:intergenic | 30.0% | |
| AATTGAATCAGCAAAGCAAT+TGG | - | chr3.3:85823307-85823326 | MS.gene012819:intron | 30.0% | |
| ACTGTAATTCTTACTAGTCA+GGG | - | chr3.3:85821952-85821971 | MS.gene012819:CDS | 30.0% | |
| AGATTGAAATACCTAATGGT+AGG | - | chr3.3:85821682-85821701 | MS.gene012819:CDS | 30.0% | |
| ATTGTCTCTATTTATGTTCC+TGG | - | chr3.3:85823750-85823769 | MS.gene012819:CDS | 30.0% | |
| CAATAGATGTACACACAAAA+CGG | + | chr3.3:85824236-85824255 | None:intergenic | 30.0% | |
| CTCAAATGATGTTTCAATGA+CGG | - | chr3.3:85822300-85822319 | MS.gene012819:CDS | 30.0% | |
| GAATTGTTTCAATGTACTTG+GGG | - | chr3.3:85824061-85824080 | MS.gene012819:intron | 30.0% | |
| GAGAATTGTTTCAATGTACT+TGG | - | chr3.3:85824059-85824078 | MS.gene012819:intron | 30.0% | |
| GATGCAAATACCAAACAATA+AGG | - | chr3.3:85822877-85822896 | MS.gene012819:intron | 30.0% | |
| GATTGAAATACCTAATGGTA+GGG | - | chr3.3:85821683-85821702 | MS.gene012819:CDS | 30.0% | |
| GGTGATTTCAAAACATGAAT+TGG | + | chr3.3:85822058-85822077 | None:intergenic | 30.0% | |
| TACTGTAATTCTTACTAGTC+AGG | - | chr3.3:85821951-85821970 | MS.gene012819:CDS | 30.0% | |
| TCATATGCTCAACTTTCATT+TGG | - | chr3.3:85823872-85823891 | MS.gene012819:intron | 30.0% | |
| TCTAATCTTGCACAATTTCA+TGG | - | chr3.3:85822418-85822437 | MS.gene012819:CDS | 30.0% | |
| TGAGTTATCATGGTTTCATT+TGG | + | chr3.3:85823618-85823637 | None:intergenic | 30.0% | |
| TTACTCACTAGAGCAAATAT+GGG | + | chr3.3:85824124-85824143 | None:intergenic | 30.0% | |
| TTGATAAATCATAGCTACTG+CGG | + | chr3.3:85823650-85823669 | None:intergenic | 30.0% | |
| TTGGTGAAACATTCACTAAT+AGG | - | chr3.3:85822473-85822492 | MS.gene012819:intron | 30.0% | |
| TTGTAGGAACTAAACTCAAA+AGG | + | chr3.3:85823516-85823535 | None:intergenic | 30.0% | |
| TTTACTCACTAGAGCAAATA+TGG | + | chr3.3:85824125-85824144 | None:intergenic | 30.0% | |
| TTTCACTAAGGTAACAGTTA+CGG | + | chr3.3:85822079-85822098 | None:intergenic | 30.0% | |
| ! | CTGATTTGATAACTGTTGTA+TGG | - | chr3.3:85822124-85822143 | MS.gene012819:CDS | 30.0% |
| !! | TTGCTGATTCAATTTGATCA+GGG | + | chr3.3:85823301-85823320 | None:intergenic | 30.0% |
| !! | TTTGCTGATTCAATTTGATC+AGG | + | chr3.3:85823302-85823321 | None:intergenic | 30.0% |
| !!! | ATTTGGCATAGTTTTATCCT+TGG | - | chr3.3:85823889-85823908 | MS.gene012819:intron | 30.0% |
| !!! | CTAGTTCGCTTTTTAATTTG+TGG | - | chr3.3:85824288-85824307 | MS.gene012819:intron | 30.0% |
| !!! | GAGCACCTTATTTTTACAAA+AGG | + | chr3.3:85823565-85823584 | None:intergenic | 30.0% |
| !!! | GTGTTTTGTTTATTCTCGTT+TGG | - | chr3.3:85822943-85822962 | MS.gene012819:intron | 30.0% |
| !!! | TTTGGCATAGTTTTATCCTT+GGG | - | chr3.3:85823890-85823909 | MS.gene012819:intron | 30.0% |
| AAAACACCTCTTATCAGTGA+TGG | + | chr3.3:85822667-85822686 | None:intergenic | 35.0% | |
| AAGTATCTTCAGATGCAATC+TGG | - | chr3.3:85821741-85821760 | MS.gene012819:CDS | 35.0% | |
| AATATGAAATCCATGTCGTC+GGG | + | chr3.3:85823176-85823195 | None:intergenic | 35.0% | |
| ACTAGGATGGTTGAACTTAT+GGG | - | chr3.3:85821813-85821832 | MS.gene012819:CDS | 35.0% | |
| AGAATCGTCTCAGAAATTCA+GGG | - | chr3.3:85824330-85824349 | MS.gene012819:intron | 35.0% | |
| ATACCAAACAATAAGGTGTG+GGG | - | chr3.3:85822884-85822903 | MS.gene012819:intron | 35.0% | |
| ATGACTGTAACTTTACCTCT+TGG | - | chr3.3:85822454-85822473 | MS.gene012819:CDS | 35.0% | |
| CAAACATATGATCAGCAACA+AGG | - | chr3.3:85824791-85824810 | MS.gene012819:intron | 35.0% | |
| CAGTCAGATACAACAAAATC+AGG | + | chr3.3:85822239-85822258 | None:intergenic | 35.0% | |
| CTCCTCCTTTACCAATTATA+AGG | + | chr3.3:85823004-85823023 | None:intergenic | 35.0% | |
| CTGTTGTATGGAGTTTCAAT+AGG | - | chr3.3:85822136-85822155 | MS.gene012819:CDS | 35.0% | |
| GAAACCATGATAACTCAAAC+TGG | - | chr3.3:85823621-85823640 | MS.gene012819:intron | 35.0% | |
| GAATATGAAATCCATGTCGT+CGG | + | chr3.3:85823177-85823196 | None:intergenic | 35.0% | |
| GATGAAATATATCCAGTTGC+AGG | - | chr3.3:85822906-85822925 | MS.gene012819:intron | 35.0% | |
| GGTTTCTTGTGTACATCTTT+AGG | - | chr3.3:85822974-85822993 | MS.gene012819:intron | 35.0% | |
| TATGATCAGCAACAAGGTTA+TGG | - | chr3.3:85824797-85824816 | MS.gene012819:intron | 35.0% | |
| TCAAACAAAATCTAACAGCC+AGG | + | chr3.3:85823771-85823790 | None:intergenic | 35.0% | |
| TCTTGTGTACATCTTTAGGT+TGG | - | chr3.3:85822978-85822997 | MS.gene012819:intron | 35.0% | |
| TGATGTACGGTCTGTATAAT+TGG | - | chr3.3:85824089-85824108 | MS.gene012819:intron | 35.0% | |
| TGATGTTTCAATGACGGTAA+AGG | - | chr3.3:85822306-85822325 | MS.gene012819:CDS | 35.0% | |
| TGCTCAAATGATGTTGGAAT+TGG | - | chr3.3:85822732-85822751 | MS.gene012819:intron | 35.0% | |
| TGTTGCTGATCATATGTTTG+TGG | + | chr3.3:85824791-85824810 | None:intergenic | 35.0% | |
| TTAGTGAATGTTTCACCAAG+AGG | + | chr3.3:85822472-85822491 | None:intergenic | 35.0% | |
| TTATTAACTAGGCTGAAGCT+GGG | - | chr3.3:85822798-85822817 | MS.gene012819:intron | 35.0% | |
| TTGGTTAATCAAATCCTCAC+TGG | - | chr3.3:85823326-85823345 | MS.gene012819:intron | 35.0% | |
| TTTATTAACTAGGCTGAAGC+TGG | - | chr3.3:85822797-85822816 | MS.gene012819:intron | 35.0% | |
| TTTCTGTTGATGTATCACCT+GGG | + | chr3.3:85823256-85823275 | None:intergenic | 35.0% | |
| ! | CTGCGCCTTTTGTAAAAATA+AGG | - | chr3.3:85823557-85823576 | MS.gene012819:CDS | 35.0% |
| ! | GATTCAAGTTACTCGTGATA+TGG | - | chr3.3:85821770-85821789 | MS.gene012819:CDS | 35.0% |
| ! | GTTGGTGTTCTTATTGGTAA+AGG | - | chr3.3:85821705-85821724 | MS.gene012819:CDS | 35.0% |
| ! | TTCATCGTACTTGCGTTTTA+GGG | + | chr3.3:85821445-85821464 | None:intergenic | 35.0% |
| !! | ATCTGGCTTATCATTTTTGG+AGG | - | chr3.3:85823381-85823400 | MS.gene012819:intron | 35.0% |
| !! | CTTTAGGTTGGCCTTATAAT+TGG | - | chr3.3:85822990-85823009 | MS.gene012819:intron | 35.0% |
| !! | GTGCTCATATTTTTACAGTG+TGG | - | chr3.3:85823579-85823598 | MS.gene012819:intron | 35.0% |
| !! | GTTGGCCTTATAATTGGTAA+AGG | - | chr3.3:85822996-85823015 | MS.gene012819:intron | 35.0% |
| !! | TCTGGCTTATCATTTTTGGA+GGG | - | chr3.3:85823382-85823401 | MS.gene012819:intron | 35.0% |
| !! | TGCTGATTCAATTTGATCAG+GGG | + | chr3.3:85823300-85823319 | None:intergenic | 35.0% |
| AAACGAACCAAGTCCGATAA+CGG | - | chr3.3:85821579-85821598 | MS.gene012819:CDS | 40.0% | |
| AACAAGCTGGTTATGGCTAT+GGG | - | chr3.3:85824429-85824448 | MS.gene012819:intron | 40.0% | |
| AACTTCTTGAGCTCGTTGTT+TGG | + | chr3.3:85821508-85821527 | None:intergenic | 40.0% | |
| AATGCGCAACAACAACAATC+TGG | - | chr3.3:85824755-85824774 | MS.gene012819:intron | 40.0% | |
| ACCATCCTAGTCTGAGAATT+AGG | + | chr3.3:85821804-85821823 | None:intergenic | 40.0% | |
| AGTGCAAATCCACCTGTTTA+TGG | - | chr3.3:85825067-85825086 | MS.gene012819:CDS | 40.0% | |
| ATCTGCTTGTGATCCATAGT+TGG | + | chr3.3:85824876-85824895 | None:intergenic | 40.0% | |
| ATGCGCAACAACAACAATCT+GGG | - | chr3.3:85824756-85824775 | MS.gene012819:intron | 40.0% | |
| CAACAACAACAATCTGGGTA+TGG | - | chr3.3:85824761-85824780 | MS.gene012819:intron | 40.0% | |
| CAGAATCGTCTCAGAAATTC+AGG | - | chr3.3:85824329-85824348 | MS.gene012819:intron | 40.0% | |
| CTGATCCTAATTCTCAGACT+AGG | - | chr3.3:85821796-85821815 | MS.gene012819:CDS | 40.0% | |
| CTTTCTGTTGATGTATCACC+TGG | + | chr3.3:85823257-85823276 | None:intergenic | 40.0% | |
| GAAATACCTAATGGTAGGGT+TGG | - | chr3.3:85821687-85821706 | MS.gene012819:CDS | 40.0% | |
| GAACTATTTCCATATGACGG+CGG | + | chr3.3:85825274-85825293 | None:intergenic | 40.0% | |
| GACTAGGATGGTTGAACTTA+TGG | - | chr3.3:85821812-85821831 | MS.gene012819:CDS | 40.0% | |
| GACTGTGATTGACCATAAAC+AGG | + | chr3.3:85825082-85825101 | None:intergenic | 40.0% | |
| GGAAATAGTTCTTATGGTGC+TGG | - | chr3.3:85825283-85825302 | MS.gene012819:CDS | 40.0% | |
| GGTGTTCTTATTGGTAAAGG+AGG | - | chr3.3:85821708-85821727 | MS.gene012819:CDS | 40.0% | |
| GGTTATGGTCAAGAAAGCTA+TGG | - | chr3.3:85824725-85824744 | MS.gene012819:intron | 40.0% | |
| TAAGAATCAAACCCCGATTG+TGG | + | chr3.3:85821609-85821628 | None:intergenic | 40.0% | |
| TAATCAAATCCTCACTGGTG+AGG | - | chr3.3:85823331-85823350 | MS.gene012819:intron | 40.0% | |
| TATTAACTAGGCTGAAGCTG+GGG | - | chr3.3:85822799-85822818 | MS.gene012819:intron | 40.0% | |
| TCCTAATTCTCAGACTAGGA+TGG | - | chr3.3:85821800-85821819 | MS.gene012819:CDS | 40.0% | |
| TGTGATTGACCATAAACAGG+TGG | + | chr3.3:85825079-85825098 | None:intergenic | 40.0% | |
| TTCTGTTGATGTATCACCTG+GGG | + | chr3.3:85823255-85823274 | None:intergenic | 40.0% | |
| ! | AAGAGTATGCAAGCTTCTAC+CGG | - | chr3.3:85823032-85823051 | MS.gene012819:intron | 40.0% |
| ! | GGCCTTATAATTGGTAAAGG+AGG | - | chr3.3:85822999-85823018 | MS.gene012819:intron | 40.0% |
| ! | GTCTCCAGTTTGAGTTATCA+TGG | + | chr3.3:85823628-85823647 | None:intergenic | 40.0% |
| ! | GTTCATCGTACTTGCGTTTT+AGG | + | chr3.3:85821446-85821465 | None:intergenic | 40.0% |
| ! | TAAACAGGTGGATTTGCACT+TGG | + | chr3.3:85825067-85825086 | None:intergenic | 40.0% |
| ! | TTATCGGACTTGGTTCGTTT+GGG | + | chr3.3:85821579-85821598 | None:intergenic | 40.0% |
| !! | ATTTGCACTTGGCTTTTGAG+AGG | + | chr3.3:85825056-85825075 | None:intergenic | 40.0% |
| !! | TATTCTCGTTTGGGTTGATG+TGG | - | chr3.3:85822953-85822972 | MS.gene012819:intron | 40.0% |
| !! | TTATGGTGCTGGTTATGTTC+AGG | - | chr3.3:85825294-85825313 | MS.gene012819:CDS | 40.0% |
| !! | TTTGCACTTGGCTTTTGAGA+GGG | + | chr3.3:85825055-85825074 | None:intergenic | 40.0% |
| ACTTGGGGCTTAGTGATGTA+CGG | - | chr3.3:85824076-85824095 | MS.gene012819:intron | 45.0% | |
| AGAAATTCAGGGAACTCAGG+TGG | - | chr3.3:85824341-85824360 | MS.gene012819:intron | 45.0% | |
| AGAACACCAACCCTACCATT+AGG | + | chr3.3:85821696-85821715 | None:intergenic | 45.0% | |
| AGTCAACCACAGTCTGGTTA+TGG | - | chr3.3:85825010-85825029 | MS.gene012819:CDS | 45.0% | |
| ATTACTCCCACTGCCATAAC+TGG | + | chr3.3:85824831-85824850 | None:intergenic | 45.0% | |
| CAACAAGCTGGTTATGGCTA+TGG | - | chr3.3:85824428-85824447 | MS.gene012819:intron | 45.0% | |
| CATCAATGAAGTCCTTGCTG+AGG | - | chr3.3:85821869-85821888 | MS.gene012819:CDS | 45.0% | |
| CATCCCCACACCTTATTGTT+TGG | + | chr3.3:85822890-85822909 | None:intergenic | 45.0% | |
| CCAAAAAACATGCCTGCAAC+TGG | + | chr3.3:85822921-85822940 | None:intergenic | 45.0% | |
| CTCAGAAATTCAGGGAACTC+AGG | - | chr3.3:85824338-85824357 | MS.gene012819:intron | 45.0% | |
| GATAACATACCTCACCAGTG+AGG | + | chr3.3:85823343-85823362 | None:intergenic | 45.0% | |
| GGAGTAATCCAACCCAAGAA+GGG | - | chr3.3:85824843-85824862 | MS.gene012819:intron | 45.0% | |
| GTGCAACCATCACTGATAAG+AGG | - | chr3.3:85822658-85822677 | MS.gene012819:intron | 45.0% | |
| TATGGAAGTCAACCACAGTC+TGG | - | chr3.3:85825004-85825023 | MS.gene012819:CDS | 45.0% | |
| TATTGGCATCAACGGGAATG+AGG | - | chr3.3:85824192-85824211 | MS.gene012819:intron | 45.0% | |
| TCTGGTTATGGACCTAGCTA+TGG | - | chr3.3:85825022-85825041 | MS.gene012819:CDS | 45.0% | |
| TCTGTTGATGTATCACCTGG+GGG | + | chr3.3:85823254-85823273 | None:intergenic | 45.0% | |
| TGAGGCTGACCTGTTAGATT+GGG | - | chr3.3:85824021-85824040 | MS.gene012819:intron | 45.0% | |
| TTACTCCCACTGCCATAACT+GGG | + | chr3.3:85824830-85824849 | None:intergenic | 45.0% | |
| TTCCCTCAACCCAATCTAAC+AGG | + | chr3.3:85824033-85824052 | None:intergenic | 45.0% | |
| TTGACTTCCATAGGCCACTT+GGG | + | chr3.3:85824996-85825015 | None:intergenic | 45.0% | |
| TTGAGGAGTTCCTTGTTGGT+TGG | + | chr3.3:85824948-85824967 | None:intergenic | 45.0% | |
| TTGAGGCTGACCTGTTAGAT+TGG | - | chr3.3:85824020-85824039 | MS.gene012819:intron | 45.0% | |
| ! | AGACTGTGGTTGACTTCCAT+AGG | + | chr3.3:85825005-85825024 | None:intergenic | 45.0% |
| ! | GTTATCGGACTTGGTTCGTT+TGG | + | chr3.3:85821580-85821599 | None:intergenic | 45.0% |
| ! | TGACCTGTTAGATTGGGTTG+AGG | - | chr3.3:85824027-85824046 | MS.gene012819:intron | 45.0% |
| !! | AGTAGTGGGTTGGGAAGTTT+GGG | + | chr3.3:85824903-85824922 | None:intergenic | 45.0% |
| !! | GACCTGTTAGATTGGGTTGA+GGG | - | chr3.3:85824028-85824047 | MS.gene012819:intron | 45.0% |
| !! | GGTAGGGTTGGTGTTCTTAT+TGG | - | chr3.3:85821699-85821718 | MS.gene012819:CDS | 45.0% |
| !! | TGTTAGATTGGGTTGAGGGA+AGG | - | chr3.3:85824032-85824051 | MS.gene012819:intron | 45.0% |
| !!! | CCAGTTGCAGGCATGTTTTT+TGG | - | chr3.3:85822918-85822937 | MS.gene012819:intron | 45.0% |
| !!! | TTTTTTAAGTTTAAAATTAT+GGG | - | chr3.3:85823418-85823437 | MS.gene012819:intron | 5.0% |
| AACTGCACAGGTTGTTCCAC+AGG | - | chr3.3:85825342-85825361 | MS.gene012819:CDS | 50.0% | |
| ACGGATGGTTGCACAATCTG+GGG | - | chr3.3:85822841-85822860 | MS.gene012819:intron | 50.0% | |
| ACTGCACAGGTTGTTCCACA+GGG | - | chr3.3:85825343-85825362 | MS.gene012819:CDS | 50.0% | |
| AGACGGATGGTTGCACAATC+TGG | - | chr3.3:85822839-85822858 | MS.gene012819:intron | 50.0% | |
| ATAACGGTGCTCCACAATCG+GGG | - | chr3.3:85821595-85821614 | MS.gene012819:CDS | 50.0% | |
| CAACAAGGAACTCCTCAACC+AGG | - | chr3.3:85824950-85824969 | MS.gene012819:CDS | 50.0% | |
| CAATCATACGGTGCTCCTCA+AGG | - | chr3.3:85825223-85825242 | MS.gene012819:CDS | 50.0% | |
| CAGCAACAGCAAAATCCTGG+GGG | - | chr3.3:85824626-85824645 | MS.gene012819:intron | 50.0% | |
| CCAGCAACAGCAAAATCCTG+GGG | - | chr3.3:85824625-85824644 | MS.gene012819:intron | 50.0% | |
| CCCAGCAACAGCAAAATCCT+GGG | - | chr3.3:85824624-85824643 | MS.gene012819:intron | 50.0% | |
| CCTGTGCAACAAGCTGGTTA+TGG | - | chr3.3:85824422-85824441 | MS.gene012819:intron | 50.0% | |
| CGGTGGATATTCCACCAACT+GGG | - | chr3.3:85824532-85824551 | MS.gene012819:intron | 50.0% | |
| CTAGGTCCATAACCAGACTG+TGG | + | chr3.3:85825019-85825038 | None:intergenic | 50.0% | |
| CTGGTTGAGGAGTTCCTTGT+TGG | + | chr3.3:85824952-85824971 | None:intergenic | 50.0% | |
| GACGGATGGTTGCACAATCT+GGG | - | chr3.3:85822840-85822859 | MS.gene012819:intron | 50.0% | |
| GAGAACCTGAATTCGTGCTC+CGG | + | chr3.3:85823054-85823073 | None:intergenic | 50.0% | |
| GATGGACCAGAGTATGATCC+AGG | + | chr3.3:85824458-85824477 | None:intergenic | 50.0% | |
| GCTACTGCATAACCTGGTTG+AGG | + | chr3.3:85824965-85824984 | None:intergenic | 50.0% | |
| GGCATGTTATACTGCGGTGA+TGG | + | chr3.3:85824476-85824495 | None:intergenic | 50.0% | |
| GGCTATGCTACCAACCAACA+AGG | - | chr3.3:85824935-85824954 | MS.gene012819:CDS | 50.0% | |
| GGCTGAGGCATGTTATACTG+CGG | + | chr3.3:85824482-85824501 | None:intergenic | 50.0% | |
| GGGAGTAATCCAACCCAAGA+AGG | - | chr3.3:85824842-85824861 | MS.gene012819:intron | 50.0% | |
| GGGTATGGTCCGCAATCATA+CGG | - | chr3.3:85825211-85825230 | MS.gene012819:CDS | 50.0% | |
| GGTTATAGCCAACCAGGACA+GGG | - | chr3.3:85824704-85824723 | MS.gene012819:intron | 50.0% | |
| TAACTCTGGCTGAGCATACC+CGG | + | chr3.3:85825164-85825183 | None:intergenic | 50.0% | |
| TACAGTCAACCTCCTTCCTC+TGG | - | chr3.3:85824683-85824702 | MS.gene012819:intron | 50.0% | |
| TATGATTGCGGACCATACCC+TGG | + | chr3.3:85825211-85825230 | None:intergenic | 50.0% | |
| TCAGCAGAAGAAACAGCGTC+AGG | + | chr3.3:85821843-85821862 | None:intergenic | 50.0% | |
| TCAGGTGGCTATACTCAGCA+AGG | - | chr3.3:85824356-85824375 | MS.gene012819:intron | 50.0% | |
| TCCTCTGGTTATAGCCAACC+AGG | - | chr3.3:85824698-85824717 | MS.gene012819:intron | 50.0% | |
| TCGCAGCAAGGTGGTAGTTA+TGG | - | chr3.3:85821648-85821667 | MS.gene012819:CDS | 50.0% | |
| TCTTGACCATAACCCTGTCC+TGG | + | chr3.3:85824719-85824738 | None:intergenic | 50.0% | |
| TGAGGAGGATAGCCTGCATA+TGG | + | chr3.3:85824506-85824525 | None:intergenic | 50.0% | |
| TGAGTAGACTGCTGGTGAGA+TGG | + | chr3.3:85824572-85824591 | None:intergenic | 50.0% | |
| TGGCTATAACCAGAGGAAGG+AGG | + | chr3.3:85824695-85824714 | None:intergenic | 50.0% | |
| TGGTTATAGCCAACCAGGAC+AGG | - | chr3.3:85824703-85824722 | MS.gene012819:intron | 50.0% | |
| TTCTACCGGAGCACGAATTC+AGG | - | chr3.3:85823046-85823065 | MS.gene012819:intron | 50.0% | |
| ! | CGATAACGGTGCTCCACAAT+CGG | - | chr3.3:85821593-85821612 | MS.gene012819:CDS | 50.0% |
| ! | CTTGGTTCGTTTGGGATCGT+AGG | + | chr3.3:85821571-85821590 | None:intergenic | 50.0% |
| ! | GATAACGGTGCTCCACAATC+GGG | - | chr3.3:85821594-85821613 | MS.gene012819:CDS | 50.0% |
| ! | GGTTGGCTATAACCAGAGGA+AGG | + | chr3.3:85824698-85824717 | None:intergenic | 50.0% |
| ! | GTTGACTTCCATAGGCCACT+TGG | + | chr3.3:85824997-85825016 | None:intergenic | 50.0% |
| ! | TATGGCTCTGCTCCCAGTTA+TGG | - | chr3.3:85824815-85824834 | MS.gene012819:intron | 50.0% |
| ! | TCCTGGTTGGCTATAACCAG+AGG | + | chr3.3:85824702-85824721 | None:intergenic | 50.0% |
| !! | CAGTAGTGGGTTGGGAAGTT+TGG | + | chr3.3:85824904-85824923 | None:intergenic | 50.0% |
| !! | CAGTTGGTGGAATATCCACC+GGG | + | chr3.3:85824533-85824552 | None:intergenic | 50.0% |
| !! | CCAGTTGGTGGAATATCCAC+CGG | + | chr3.3:85824534-85824553 | None:intergenic | 50.0% |
| !! | CCATAACCAGCTTGTTGCAC+AGG | + | chr3.3:85824425-85824444 | None:intergenic | 50.0% |
| !! | CGATTGTGGAGCACCGTTAT+CGG | + | chr3.3:85821595-85821614 | None:intergenic | 50.0% |
| !! | GTAGTGGGTTGGGAAGTTTG+GGG | + | chr3.3:85824902-85824921 | None:intergenic | 50.0% |
| !! | GTTGGTAGCATAGCCTTGCT+GGG | + | chr3.3:85824930-85824949 | None:intergenic | 50.0% |
| !! | TAGTGGGTTGGGAAGTTTGG+GGG | + | chr3.3:85824901-85824920 | None:intergenic | 50.0% |
| !! | TGAGGAGCACCGTATGATTG+CGG | + | chr3.3:85825223-85825242 | None:intergenic | 50.0% |
| !! | TTTGCTGTTGCTGGGGTTGT+TGG | + | chr3.3:85824619-85824638 | None:intergenic | 50.0% |
| !!! | CCAGGATTTTGCTGTTGCTG+GGG | + | chr3.3:85824626-85824645 | None:intergenic | 50.0% |
| !!! | CCCAGGATTTTGCTGTTGCT+GGG | + | chr3.3:85824627-85824646 | None:intergenic | 50.0% |
| AAGCCGCAATACTCGCAGCA+AGG | - | chr3.3:85821636-85821655 | MS.gene012819:CDS | 55.0% | |
| ACTTCCATAGGCCACTTGGG+AGG | + | chr3.3:85824993-85825012 | None:intergenic | 55.0% | |
| ACTTTAGCAACACCGCCCTG+TGG | + | chr3.3:85825361-85825380 | None:intergenic | 55.0% | |
| AGCCAACCAGGACAGGGTTA+TGG | - | chr3.3:85824710-85824729 | MS.gene012819:intron | 55.0% | |
| ATACCTTTGCATCCTCCCCC+AGG | - | chr3.3:85823236-85823255 | MS.gene012819:intron | 55.0% | |
| ATAGGCCACTTGGGAGGTAG+GGG | + | chr3.3:85824987-85825006 | None:intergenic | 55.0% | |
| ATGCCTCAGCCACCATATGC+AGG | - | chr3.3:85824491-85824510 | MS.gene012819:intron | 55.0% | |
| CACCAGCAGTCTACTCATGC+AGG | - | chr3.3:85824575-85824594 | MS.gene012819:intron | 55.0% | |
| CACCTGCATGAGTAGACTGC+TGG | + | chr3.3:85824580-85824599 | None:intergenic | 55.0% | |
| CAGCAGTCTACTCATGCAGG+TGG | - | chr3.3:85824578-85824597 | MS.gene012819:intron | 55.0% | |
| CATAGGCCACTTGGGAGGTA+GGG | + | chr3.3:85824988-85825007 | None:intergenic | 55.0% | |
| CCCCAGCAACAGCAAAATCC+TGG | - | chr3.3:85824623-85824642 | MS.gene012819:intron | 55.0% | |
| CCGGTGGATATTCCACCAAC+TGG | - | chr3.3:85824531-85824550 | MS.gene012819:intron | 55.0% | |
| CCTTGCTGGGCAACAGTAGT+GGG | + | chr3.3:85824917-85824936 | None:intergenic | 55.0% | |
| CGGATGGTTGCACAATCTGG+GGG | - | chr3.3:85822842-85822861 | MS.gene012819:intron | 55.0% | |
| CTGCTCCCAGTTATGGCAGT+GGG | - | chr3.3:85824822-85824841 | MS.gene012819:intron | 55.0% | |
| CTGTATGCAGACCCATCAGC+TGG | + | chr3.3:85824662-85824681 | None:intergenic | 55.0% | |
| GAATATCCACCGGGTTGCTG+AGG | + | chr3.3:85824524-85824543 | None:intergenic | 55.0% | |
| GACCATAACCCTGTCCTGGT+TGG | + | chr3.3:85824715-85824734 | None:intergenic | 55.0% | |
| GCTCTCTGAGTGCCTAACTC+TGG | + | chr3.3:85825178-85825197 | None:intergenic | 55.0% | |
| GGAGGATAGCCTGCATATGG+TGG | + | chr3.3:85824503-85824522 | None:intergenic | 55.0% | |
| GGGCAACCTGGATCATACTC+TGG | - | chr3.3:85824449-85824468 | MS.gene012819:intron | 55.0% | |
| GGGTATGCTCAGCCAGAGTT+AGG | - | chr3.3:85825163-85825182 | MS.gene012819:CDS | 55.0% | |
| GGTGAGATGGTGCAGTGGAT+TGG | + | chr3.3:85824559-85824578 | None:intergenic | 55.0% | |
| GGTTATGGCTATGGGCAACC+TGG | - | chr3.3:85824437-85824456 | MS.gene012819:intron | 55.0% | |
| GTAGATGAGCGCAAGTCCCA+AGG | + | chr3.3:85823909-85823928 | None:intergenic | 55.0% | |
| GTAGGGGCTACTGCATAACC+TGG | + | chr3.3:85824971-85824990 | None:intergenic | 55.0% | |
| GTCCTTCACAGCCAGCTGAT+GGG | - | chr3.3:85824648-85824667 | MS.gene012819:intron | 55.0% | |
| GTTGATGTATCACCTGGGGG+AGG | + | chr3.3:85823251-85823270 | None:intergenic | 55.0% | |
| TAGCCTGCATATGGTGGCTG+AGG | + | chr3.3:85824497-85824516 | None:intergenic | 55.0% | |
| TAGCGATGGAGCAACTGCAC+AGG | - | chr3.3:85825330-85825349 | MS.gene012819:CDS | 55.0% | |
| TCACAGTCACCTAGCACAGC+AGG | - | chr3.3:85825094-85825113 | MS.gene012819:CDS | 55.0% | |
| TCATACGGTGCTCCTCAAGG+TGG | - | chr3.3:85825226-85825245 | MS.gene012819:CDS | 55.0% | |
| TCTGCTCCCAGTTATGGCAG+TGG | - | chr3.3:85824821-85824840 | MS.gene012819:intron | 55.0% | |
| TTCCATATGACGGCGGAGTC+TGG | + | chr3.3:85825267-85825286 | None:intergenic | 55.0% | |
| TTGGGATCGTAGGAGAGTGG+TGG | + | chr3.3:85821561-85821580 | None:intergenic | 55.0% | |
| ! | AGTTGGAAGCGTGCCCTTCT+TGG | + | chr3.3:85824859-85824878 | None:intergenic | 55.0% |
| ! | CCACCTTGCTGCGAGTATTG+CGG | + | chr3.3:85821642-85821661 | None:intergenic | 55.0% |
| ! | CGTTTGGGATCGTAGGAGAG+TGG | + | chr3.3:85821564-85821583 | None:intergenic | 55.0% |
| ! | GAAGGGCACGCTTCCAACTA+TGG | - | chr3.3:85824860-85824879 | MS.gene012819:intron | 55.0% |
| ! | GACTTCGAGTTCGATGTCCG+TGG | + | chr3.3:85821478-85821497 | None:intergenic | 55.0% |
| ! | GTTGGAAGCGTGCCCTTCTT+GGG | + | chr3.3:85824858-85824877 | None:intergenic | 55.0% |
| ! | TTCGAGTTCGATGTCCGTGG+CGG | + | chr3.3:85821475-85821494 | None:intergenic | 55.0% |
| !! | AGAGAGCACCAGTGCAACCA+GGG | - | chr3.3:85825191-85825210 | MS.gene012819:CDS | 55.0% |
| !! | AGTGGATTGGTCCCAGTTGG+TGG | + | chr3.3:85824546-85824565 | None:intergenic | 55.0% |
| !! | AGTGGGTTGGGAAGTTTGGG+GGG | + | chr3.3:85824900-85824919 | None:intergenic | 55.0% |
| !! | CTGGGCAACAGTAGTGGGTT+GGG | + | chr3.3:85824912-85824931 | None:intergenic | 55.0% |
| !! | GCACTTGGCTTTTGAGAGGG+AGG | + | chr3.3:85825052-85825071 | None:intergenic | 55.0% |
| !! | GGTTGGTAGCATAGCCTTGC+TGG | + | chr3.3:85824931-85824950 | None:intergenic | 55.0% |
| !! | TGCAGTGGATTGGTCCCAGT+TGG | + | chr3.3:85824549-85824568 | None:intergenic | 55.0% |
| !! | TGGAGCACCGTTATCGGACT+TGG | + | chr3.3:85821589-85821608 | None:intergenic | 55.0% |
| !!! | CCCCAGGATTTTGCTGTTGC+TGG | + | chr3.3:85824628-85824647 | None:intergenic | 55.0% |
| AATCCCGACCACCGTCTAGC+TGG | - | chr3.3:85824384-85824403 | MS.gene012819:intron | 60.0% | |
| AGCTAGACGGTGGTCGGGAT+TGG | + | chr3.3:85824385-85824404 | None:intergenic | 60.0% | |
| AGTAGCCCCTACCTCCCAAG+TGG | - | chr3.3:85824979-85824998 | MS.gene012819:CDS | 60.0% | |
| AGTTCGATGTCCGTGGCGGT+GGG | + | chr3.3:85821471-85821490 | None:intergenic | 60.0% | |
| ATCCCGACCACCGTCTAGCT+GGG | - | chr3.3:85824385-85824404 | MS.gene012819:intron | 60.0% | |
| CAGTCACCTAGCACAGCAGG+AGG | - | chr3.3:85825097-85825116 | MS.gene012819:CDS | 60.0% | |
| CCATAGCCTCCTGCTGTGCT+AGG | + | chr3.3:85825106-85825125 | None:intergenic | 60.0% | |
| CCATAGGCCACTTGGGAGGT+AGG | + | chr3.3:85824989-85825008 | None:intergenic | 60.0% | |
| CCCACTACTGTTGCCCAGCA+AGG | - | chr3.3:85824914-85824933 | MS.gene012819:intron | 60.0% | |
| CCGCAATACTCGCAGCAAGG+TGG | - | chr3.3:85821639-85821658 | MS.gene012819:CDS | 60.0% | |
| CCTACCTCCCAAGTGGCCTA+TGG | - | chr3.3:85824986-85825005 | MS.gene012819:CDS | 60.0% | |
| CCTAGCACAGCAGGAGGCTA+TGG | - | chr3.3:85825103-85825122 | MS.gene012819:CDS | 60.0% | |
| CGATGAACAACCCACCGCCA+CGG | - | chr3.3:85821458-85821477 | MS.gene012819:CDS | 60.0% | |
| CTGCTGGTGAGATGGTGCAG+TGG | + | chr3.3:85824564-85824583 | None:intergenic | 60.0% | |
| CTTCTGGCGGTGGCACTAGA+CGG | - | chr3.3:85822822-85822841 | MS.gene012819:intron | 60.0% | |
| GAAGCGTGCCCTTCTTGGGT+TGG | + | chr3.3:85824854-85824873 | None:intergenic | 60.0% | |
| GACCCATCAGCTGGCTGTGA+AGG | + | chr3.3:85824653-85824672 | None:intergenic | 60.0% | |
| GCACAGGTTGTTCCACAGGG+CGG | - | chr3.3:85825346-85825365 | MS.gene012819:CDS | 60.0% | |
| GCACCAGTGCAACCAGGGTA+TGG | - | chr3.3:85825196-85825215 | MS.gene012819:CDS | 60.0% | |
| GCCTTGCTGGGCAACAGTAG+TGG | + | chr3.3:85824918-85824937 | None:intergenic | 60.0% | |
| GCTCCAGCGTATGCTAGCGA+TGG | - | chr3.3:85825316-85825335 | MS.gene012819:CDS | 60.0% | |
| GCTCCATCGCTAGCATACGC+TGG | + | chr3.3:85825322-85825341 | None:intergenic | 60.0% | |
| GCTCGTCTTCTCAGCGTCAC+CGG | - | chr3.3:85821531-85821550 | MS.gene012819:CDS | 60.0% | |
| GCTGCTCCTGTGCAACAAGC+TGG | - | chr3.3:85824416-85824435 | MS.gene012819:intron | 60.0% | |
| GGACCATACCCTGGTTGCAC+TGG | + | chr3.3:85825202-85825221 | None:intergenic | 60.0% | |
| GGCTATCCTCCTCAGCAACC+CGG | - | chr3.3:85824512-85824531 | MS.gene012819:intron | 60.0% | |
| GGTCCTTCACAGCCAGCTGA+TGG | - | chr3.3:85824647-85824666 | MS.gene012819:intron | 60.0% | |
| GGTGACGCTGAGAAGACGAG+CGG | + | chr3.3:85821532-85821551 | None:intergenic | 60.0% | |
| TAGGCTGAAGCTGGGGCTTC+TGG | - | chr3.3:85822806-85822825 | MS.gene012819:intron | 60.0% | |
| TATCCACCGGGTTGCTGAGG+AGG | + | chr3.3:85824521-85824540 | None:intergenic | 60.0% | |
| TATCCTCCTCAGCAACCCGG+TGG | - | chr3.3:85824515-85824534 | MS.gene012819:intron | 60.0% | |
| TCACCTGGGGGAGGATGCAA+AGG | + | chr3.3:85823242-85823261 | None:intergenic | 60.0% | |
| TCTGGCTGAGCATACCCGGA+AGG | + | chr3.3:85825160-85825179 | None:intergenic | 60.0% | |
| TGTTGCACAGGAGCAGCAGG+AGG | + | chr3.3:85824413-85824432 | None:intergenic | 60.0% | |
| ! | GCTTGTTGCACAGGAGCAGC+AGG | + | chr3.3:85824416-85824435 | None:intergenic | 60.0% |
| !! | CAGAGAGCACCAGTGCAACC+AGG | - | chr3.3:85825190-85825209 | MS.gene012819:CDS | 60.0% |
| !! | GAGGGAGGAGCACCATAGCT+AGG | + | chr3.3:85825037-85825056 | None:intergenic | 60.0% |
| !! | GCTGGGCAACAGTAGTGGGT+TGG | + | chr3.3:85824913-85824932 | None:intergenic | 60.0% |
| AGCCCAGCTAGACGGTGGTC+GGG | + | chr3.3:85824390-85824409 | None:intergenic | 65.0% | |
| CAAGGTGGCCAGCCTGGCTA+TGG | - | chr3.3:85825241-85825260 | MS.gene012819:CDS | 65.0% | |
| CAGCTGACTGCCCGACGACA+TGG | - | chr3.3:85823163-85823182 | MS.gene012819:intron | 65.0% | |
| CTGAGCATACCCGGAAGGCG+GGG | + | chr3.3:85825155-85825174 | None:intergenic | 65.0% | |
| GAGCCCAGCTAGACGGTGGT+CGG | + | chr3.3:85824391-85824410 | None:intergenic | 65.0% | |
| GAGTCTGGCCATAGCCAGGC+TGG | + | chr3.3:85825252-85825271 | None:intergenic | 65.0% | |
| GAGTTCGATGTCCGTGGCGG+TGG | + | chr3.3:85821472-85821491 | None:intergenic | 65.0% | |
| GCAGGAGGAGCCCAGCTAGA+CGG | + | chr3.3:85824398-85824417 | None:intergenic | 65.0% | |
| GCTGAAGCTGGGGCTTCTGG+CGG | - | chr3.3:85822809-85822828 | MS.gene012819:intron | 65.0% | |
| GCTGAGCATACCCGGAAGGC+GGG | + | chr3.3:85825156-85825175 | None:intergenic | 65.0% | |
| GGCCAGACTCCGCCGTCATA+TGG | - | chr3.3:85825262-85825281 | MS.gene012819:CDS | 65.0% | |
| GGCTGAGCATACCCGGAAGG+CGG | + | chr3.3:85825157-85825176 | None:intergenic | 65.0% | |
| TGAGCATACCCGGAAGGCGG+GGG | + | chr3.3:85825154-85825173 | None:intergenic | 65.0% | |
| TGGCGGTGGCACTAGACGGA+TGG | - | chr3.3:85822826-85822845 | MS.gene012819:intron | 65.0% | |
| ! | GTAGGAGAGTGGTGGAGCGC+CGG | + | chr3.3:85821553-85821572 | None:intergenic | 65.0% |
| ! | TAGCCAGGCTGGCCACCTTG+AGG | + | chr3.3:85825241-85825260 | None:intergenic | 65.0% |
| GAAGCTGGGGCTTCTGGCGG+TGG | - | chr3.3:85822812-85822831 | MS.gene012819:intron | 70.0% | |
| GCTCCTCAAGGTGGCCAGCC+TGG | - | chr3.3:85825235-85825254 | MS.gene012819:CDS | 70.0% | |
| GCTGGCTGTGAAGGACCCCC+AGG | + | chr3.3:85824644-85824663 | None:intergenic | 70.0% | |
| GGAGGAGCCCAGCTAGACGG+TGG | + | chr3.3:85824395-85824414 | None:intergenic | 70.0% | |
| GGCGGAGTCTGGCCATAGCC+AGG | + | chr3.3:85825256-85825275 | None:intergenic | 70.0% | |
| TCTAGCCAGCCCCCGCCTTC+CGG | - | chr3.3:85825142-85825161 | MS.gene012819:CDS | 70.0% | |
| !! | GAAGGCGGGGGCTGGCTAGA+GGG | + | chr3.3:85825142-85825161 | None:intergenic | 70.0% |
| CATACCCGGAAGGCGGGGGC+TGG | + | chr3.3:85825150-85825169 | None:intergenic | 75.0% | |
| CTAGCCAGCCCCCGCCTTCC+GGG | - | chr3.3:85825143-85825162 | MS.gene012819:CDS | 75.0% | |
| !! | GGAAGGCGGGGGCTGGCTAG+AGG | + | chr3.3:85825143-85825162 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 85821417 | 85825396 | 85821417 | ID=MS.gene012819 |
| chr3.3 | mRNA | 85821417 | 85825396 | 85821417 | ID=MS.gene012819.t1;Parent=MS.gene012819 |
| chr3.3 | exon | 85824923 | 85825396 | 85824923 | ID=MS.gene012819.t1.exon1;Parent=MS.gene012819.t1 |
| chr3.3 | CDS | 85824923 | 85825396 | 85824923 | ID=cds.MS.gene012819.t1;Parent=MS.gene012819.t1 |
| chr3.3 | exon | 85823915 | 85824004 | 85823915 | ID=MS.gene012819.t1.exon2;Parent=MS.gene012819.t1 |
| chr3.3 | CDS | 85823915 | 85824004 | 85823915 | ID=cds.MS.gene012819.t1;Parent=MS.gene012819.t1 |
| chr3.3 | exon | 85823746 | 85823817 | 85823746 | ID=MS.gene012819.t1.exon3;Parent=MS.gene012819.t1 |
| chr3.3 | CDS | 85823746 | 85823817 | 85823746 | ID=cds.MS.gene012819.t1;Parent=MS.gene012819.t1 |
| chr3.3 | exon | 85823461 | 85823580 | 85823461 | ID=MS.gene012819.t1.exon4;Parent=MS.gene012819.t1 |
| chr3.3 | CDS | 85823461 | 85823580 | 85823461 | ID=cds.MS.gene012819.t1;Parent=MS.gene012819.t1 |
| chr3.3 | exon | 85821417 | 85822481 | 85821417 | ID=MS.gene012819.t1.exon5;Parent=MS.gene012819.t1 |
| chr3.3 | CDS | 85821417 | 85822481 | 85821417 | ID=cds.MS.gene012819.t1;Parent=MS.gene012819.t1 |
| Gene Sequence |
| Protein sequence |
