Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012821.t1 | XP_003603139.1 | 90.1 | 474 | 47 | 0 | 1 | 474 | 1 | 474 | 6.10E-190 | 674.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012821.t1 | Q96AE4 | 32.0 | 247 | 146 | 7 | 29 | 263 | 33 | 269 | 1.9e-22 | 109.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012821.t1 | G7J7L9 | 90.1 | 474 | 47 | 0 | 1 | 474 | 1 | 474 | 4.4e-190 | 674.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012821 | MS.gene73790 | PPI |
| MS.gene02577 | MS.gene012821 | PPI |
| MS.gene012821 | MS.gene46269 | PPI |
| MS.gene73791 | MS.gene012821 | PPI |
| MS.gene012821 | MS.gene03206 | PPI |
| MS.gene46271 | MS.gene012821 | PPI |
| MS.gene012821 | MS.gene013791 | PPI |
| MS.gene013796 | MS.gene012821 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012821.t1 | MTR_3g104270 | 97.521 | 605 | 15 | 0 | 1 | 605 | 1 | 605 | 0.0 | 1134 |
| MS.gene012821.t1 | MTR_3g104280 | 97.025 | 605 | 18 | 0 | 1 | 605 | 1 | 605 | 0.0 | 1124 |
| MS.gene012821.t1 | MTR_1g016760 | 61.252 | 671 | 150 | 19 | 1 | 605 | 1 | 627 | 0.0 | 597 |
| MS.gene012821.t1 | MTR_5g008420 | 42.308 | 520 | 219 | 24 | 82 | 563 | 181 | 657 | 5.68e-73 | 249 |
| MS.gene012821.t1 | MTR_1g090773 | 29.032 | 217 | 123 | 6 | 89 | 291 | 39 | 238 | 1.40e-11 | 66.6 |
| MS.gene012821.t1 | MTR_7g010340 | 27.597 | 308 | 156 | 16 | 68 | 346 | 95 | 364 | 3.01e-11 | 66.6 |
| MS.gene012821.t1 | MTR_7g010340 | 27.597 | 308 | 156 | 16 | 68 | 346 | 79 | 348 | 3.09e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012821.t1 | AT2G25970 | 53.546 | 564 | 181 | 21 | 26 | 553 | 66 | 584 | 2.63e-130 | 396 |
| MS.gene012821.t1 | AT1G33680 | 35.739 | 568 | 246 | 27 | 86 | 599 | 232 | 734 | 2.73e-56 | 203 |
| MS.gene012821.t1 | AT4G10070 | 44.961 | 258 | 124 | 7 | 82 | 328 | 172 | 422 | 2.97e-52 | 191 |
| MS.gene012821.t1 | AT5G04430 | 30.288 | 208 | 125 | 7 | 89 | 289 | 38 | 232 | 1.21e-13 | 72.8 |
| MS.gene012821.t1 | AT5G04430 | 31.548 | 168 | 102 | 4 | 89 | 253 | 38 | 195 | 2.81e-12 | 68.6 |
Find 238 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGCCAGGCCCCGCCTTC+TGG | 0.193239 | 3.3:-85803124 | MS.gene012821:CDS |
| GGTAGGGTTGGTGTTCTTAT+TGG | 0.218158 | 3.3:-85806577 | MS.gene012821:CDS |
| TTCTACCGGGGCACGAATTC+AGG | 0.220193 | 3.3:-85805230 | MS.gene012821:intron |
| GACTAGGATGGTTGAACTTA+TGG | 0.236098 | 3.3:-85806464 | MS.gene012821:CDS |
| CAGAATCGTCTCAGAAATTC+AGG | 0.249484 | 3.3:-85803934 | MS.gene012821:CDS |
| CAGTAGTGGGTTGGGAAGTT+TGG | 0.252253 | 3.3:+85803365 | None:intergenic |
| CTCCTCCTTTACCGATTATA+AGG | 0.263800 | 3.3:+85805275 | None:intergenic |
| TAGGCTGAAGCTGGGGCTTC+TGG | 0.266896 | 3.3:-85805470 | MS.gene012821:CDS |
| GGTTGGTAGCATAGCCTTGC+TGG | 0.287848 | 3.3:+85803338 | None:intergenic |
| ATTACTCCCACTGCCATAAC+TGG | 0.291727 | 3.3:+85803438 | None:intergenic |
| AGACGGATGGTTGCACAATC+TGG | 0.309169 | 3.3:-85805437 | MS.gene012821:CDS |
| ACCATCCTAGTCTGAGAATT+AGG | 0.309685 | 3.3:+85806475 | None:intergenic |
| CTTTCTGTTGATGTATCACC+TGG | 0.313635 | 3.3:+85805019 | None:intergenic |
| TCTCCCCACACCTTATTGTT+TGG | 0.320962 | 3.3:+85805389 | None:intergenic |
| AGTAGTGGGTTGGGAAGTTT+GGG | 0.330555 | 3.3:+85803366 | None:intergenic |
| TCATATGGAAATAGTTCTTA+TGG | 0.338429 | 3.3:-85802989 | MS.gene012821:CDS |
| GAAACTCCTCAACCAGGTTA+TGG | 0.345359 | 3.3:-85803310 | MS.gene012821:CDS |
| CTTTAGGTTGGCCTTATAAT+CGG | 0.348223 | 3.3:-85805286 | MS.gene012821:intron |
| TATAATGCGCAACAACAATC+TGG | 0.353841 | 3.3:-85803511 | MS.gene012821:CDS |
| CCGGTGGATATTCCGCCAAC+TGG | 0.354362 | 3.3:-85803732 | MS.gene012821:CDS |
| AACCTCCTTCCTCTGGTTAT+AGG | 0.356288 | 3.3:-85803573 | MS.gene012821:CDS |
| TTTGCTGTTGCTGGGGTTGT+TGG | 0.358645 | 3.3:+85803647 | None:intergenic |
| GTTATCGGACTTGGTTCGTT+TGG | 0.360575 | 3.3:+85806699 | None:intergenic |
| AACTTCTTGAGCTCGTTGTT+TGG | 0.361408 | 3.3:+85806771 | None:intergenic |
| GAAGCTGGGGCTTCTGGCGG+TGG | 0.361827 | 3.3:-85805464 | MS.gene012821:CDS |
| AGTGCAAATCCACCTGCTTA+TGG | 0.362303 | 3.3:-85803199 | MS.gene012821:CDS |
| TTTGCTGATTCAATTTGATC+AGG | 0.363459 | 3.3:+85804974 | None:intergenic |
| AGTTGGAAGTGTGCCCCTCT+TGG | 0.365119 | 3.3:+85803410 | None:intergenic |
| GATTCAAGTTACTCGTGATA+TGG | 0.369842 | 3.3:-85806506 | MS.gene012821:CDS |
| CCATAGGCCGCTTGGGAGGT+AGG | 0.372582 | 3.3:+85803280 | None:intergenic |
| TTTATTAACTAGGCTGAAGC+TGG | 0.373039 | 3.3:-85805479 | MS.gene012821:intron |
| GAGGGGCACACTTCCAACTA+TGG | 0.374400 | 3.3:-85803406 | MS.gene012821:CDS |
| CCTGCACAACAAGCTGGTTA+TGG | 0.376085 | 3.3:-85803841 | MS.gene012821:CDS |
| GATGCAAATACCAAACAATA+AGG | 0.377129 | 3.3:-85805399 | MS.gene012821:intron |
| TTATCGGACTTGGTTCGTTT+GGG | 0.378392 | 3.3:+85806700 | None:intergenic |
| TGGTTATAGGCAACCTGGAC+AGG | 0.386233 | 3.3:-85803560 | MS.gene012821:CDS |
| GAGTTCGATGTCCGTGGCGG+TGG | 0.387307 | 3.3:+85806807 | None:intergenic |
| AAACTCCTCAACCAGGTTAT+GGG | 0.389331 | 3.3:-85803309 | MS.gene012821:CDS |
| TGTTGCTGATCATATGTTTG+TGG | 0.391746 | 3.3:+85803478 | None:intergenic |
| GGTCCTCCACAGCCAGCTGA+TGG | 0.395783 | 3.3:-85803616 | MS.gene012821:CDS |
| GTTGGTGTTCTTATTGGTAA+AGG | 0.399271 | 3.3:-85806571 | MS.gene012821:CDS |
| TGGAGCACCGTTATCGGACT+TGG | 0.399369 | 3.3:+85806690 | None:intergenic |
| CCTACCTCCCAAGCGGCCTA+TGG | 0.399491 | 3.3:-85803280 | MS.gene012821:CDS |
| TTCCATATGACGGTGGAGTC+TGG | 0.403625 | 3.3:+85803002 | None:intergenic |
| CCCCAGCAACAGCAAAATCC+TGG | 0.404109 | 3.3:-85803640 | MS.gene012821:CDS |
| AGTCAACCACAGTCTGGTTA+TGG | 0.407882 | 3.3:-85803256 | MS.gene012821:CDS |
| GACTGACCATAGCCTCCTGC+AGG | 0.408573 | 3.3:+85803157 | None:intergenic |
| GGCCAGACTCCACCGTCATA+TGG | 0.410070 | 3.3:-85803004 | MS.gene012821:CDS |
| TATGATCAGCAACAAGGTTA+TGG | 0.411167 | 3.3:-85803469 | MS.gene012821:CDS |
| AACTGCACAGGCTGTTCCAC+AGG | 0.415355 | 3.3:-85802924 | MS.gene012821:CDS |
| AATCCCGACCACCGTCTAGC+TGG | 0.415564 | 3.3:-85803879 | MS.gene012821:CDS |
| CATAGGCCGCTTGGGAGGTA+GGG | 0.417451 | 3.3:+85803281 | None:intergenic |
| CATATCCAGAAGGCGGGGCC+TGG | 0.418708 | 3.3:+85803119 | None:intergenic |
| ACTAGGATGGTTGAACTTAT+GGG | 0.418819 | 3.3:-85806463 | MS.gene012821:CDS |
| GCTTGTTGTGCAGGAGCAGC+AGG | 0.419616 | 3.3:+85803850 | None:intergenic |
| TCTGGTTATGGACCTGGTTA+TGG | 0.421938 | 3.3:-85803244 | MS.gene012821:CDS |
| CTGGTTGAGGAGTTTCTTGT+TGG | 0.423458 | 3.3:+85803317 | None:intergenic |
| TATGGCTCTGCTCCCAGTTA+TGG | 0.425707 | 3.3:-85803451 | MS.gene012821:CDS |
| AGGCAACCTGGACAGGGTTA+TGG | 0.428875 | 3.3:-85803553 | MS.gene012821:CDS |
| CTGGGCAACAGTAGTGGGTT+GGG | 0.439592 | 3.3:+85803357 | None:intergenic |
| CAACAAGCTGGTTATGGCTA+TGG | 0.440407 | 3.3:-85803835 | MS.gene012821:CDS |
| CGATTGTGGAGCACCGTTAT+CGG | 0.444219 | 3.3:+85806684 | None:intergenic |
| GACGGATGGTTGCACAATCT+GGG | 0.446354 | 3.3:-85805436 | MS.gene012821:CDS |
| CGATAACGGTGCTCCACAAT+CGG | 0.446619 | 3.3:-85806683 | MS.gene012821:CDS |
| GAGTCTGGCCATAGCTAGGC+TGG | 0.448899 | 3.3:+85803017 | None:intergenic |
| GTTGACTTCCATAGGCCGCT+TGG | 0.454305 | 3.3:+85803272 | None:intergenic |
| AGCCCAGCTAGACGGTGGTC+GGG | 0.454864 | 3.3:+85803876 | None:intergenic |
| CCATAACCAGCTTGTTGTGC+AGG | 0.455611 | 3.3:+85803841 | None:intergenic |
| TTGACTTCCATAGGCCGCTT+GGG | 0.461597 | 3.3:+85803273 | None:intergenic |
| AGCTAGACGGTGGTCGGGAT+TGG | 0.461750 | 3.3:+85803881 | None:intergenic |
| AATTGAATCAGCAAAGCAAT+TGG | 0.464801 | 3.3:-85804966 | MS.gene012821:CDS |
| AAGTATCTTCAGATGCAATC+TGG | 0.464861 | 3.3:-85806535 | MS.gene012821:CDS |
| GTCCTCCACAGCCAGCTGAT+GGG | 0.465554 | 3.3:-85803615 | MS.gene012821:CDS |
| AGAACACCAACCCTACCATT+AGG | 0.466222 | 3.3:+85806583 | None:intergenic |
| AGAAGGCGGGGCCTGGCTAG+AGG | 0.466470 | 3.3:+85803126 | None:intergenic |
| TCCTGACCATAACCCTGTCC+AGG | 0.466770 | 3.3:+85803547 | None:intergenic |
| TACAGTCAACCTCCTTCCTC+TGG | 0.467231 | 3.3:-85803580 | MS.gene012821:CDS |
| GATAACGGTGCTCCACAATC+GGG | 0.467332 | 3.3:-85806682 | MS.gene012821:CDS |
| GTTGGAAGTGTGCCCCTCTT+GGG | 0.469268 | 3.3:+85803411 | None:intergenic |
| CCTAGCCCTGCAGGAGGCTA+TGG | 0.472529 | 3.3:-85803163 | MS.gene012821:CDS |
| TTGCTGATTCAATTTGATCA+GGG | 0.472599 | 3.3:+85804975 | None:intergenic |
| TCGCAGCAAGGTGGTAGTTA+TGG | 0.474269 | 3.3:-85806628 | MS.gene012821:CDS |
| AAGAAGATTGAAATACCTAA+TGG | 0.476293 | 3.3:-85806598 | MS.gene012821:CDS |
| GACCCATCAGCTGGCTGTGG+AGG | 0.477036 | 3.3:+85803613 | None:intergenic |
| GAAGTGTGCCCCTCTTGGGT+TGG | 0.479594 | 3.3:+85803415 | None:intergenic |
| TTATGGTGCTAGTTATGCTC+AGG | 0.481239 | 3.3:-85802972 | MS.gene012821:CDS |
| CCATAGCCTCCTGCAGGGCT+AGG | 0.483190 | 3.3:+85803163 | None:intergenic |
| GAAGGCGGGGCCTGGCTAGA+GGG | 0.486048 | 3.3:+85803127 | None:intergenic |
| GGGTATGGTCCGCAATCATA+TGG | 0.486408 | 3.3:-85803055 | MS.gene012821:CDS |
| GGTTATGGCTATGGGCAACC+TGG | 0.488138 | 3.3:-85803826 | MS.gene012821:CDS |
| TCACAGTCACCTAGCCCTGC+AGG | 0.491209 | 3.3:-85803172 | MS.gene012821:CDS |
| AAGAGTATGCAAGCTTCTAC+CGG | 0.492893 | 3.3:-85805244 | MS.gene012821:CDS |
| GCTGAGCATATCCAGAAGGC+GGG | 0.493910 | 3.3:+85803113 | None:intergenic |
| ACCTGGACAGGGTTATGGTC+AGG | 0.497241 | 3.3:-85803548 | MS.gene012821:CDS |
| CTTCTGGCGGTGGCACTAGA+CGG | 0.497957 | 3.3:-85805454 | MS.gene012821:CDS |
| GATGGACCAGAGTATGATCC+AGG | 0.501151 | 3.3:+85803808 | None:intergenic |
| TTCTGTTGATGTATCACCTG+GGG | 0.507849 | 3.3:+85805021 | None:intergenic |
| CCCAGCAACAGCAAAATCCT+GGG | 0.508607 | 3.3:-85803639 | MS.gene012821:CDS |
| GTTGGTAGCATAGCCTTGCT+GGG | 0.508853 | 3.3:+85803339 | None:intergenic |
| CTGCTCCCAGTTATGGCAGT+GGG | 0.512052 | 3.3:-85803444 | MS.gene012821:CDS |
| TTGAGGAGTTTCTTGTTGGT+TGG | 0.513013 | 3.3:+85803321 | None:intergenic |
| TATGGAAGTCAACCACAGTC+TGG | 0.513429 | 3.3:-85803262 | MS.gene012821:CDS |
| TGCTGATTCAATTTGATCAG+GGG | 0.517465 | 3.3:+85804976 | None:intergenic |
| ATCTGCTTGTGATCCATAGT+TGG | 0.518728 | 3.3:+85803393 | None:intergenic |
| CTTGGTTCGTTTGGGATCGT+AGG | 0.519590 | 3.3:+85806708 | None:intergenic |
| GAAATACCTAATGGTAGGGT+TGG | 0.520361 | 3.3:-85806589 | MS.gene012821:CDS |
| GTTGGCCTTATAATCGGTAA+AGG | 0.521991 | 3.3:-85805280 | MS.gene012821:CDS |
| GCTCTCTGAGTGCCTAACTC+TGG | 0.522190 | 3.3:+85803091 | None:intergenic |
| CCAGTTGGCGGAATATCCAC+CGG | 0.522965 | 3.3:+85803732 | None:intergenic |
| CAAGGTGGCCAGCCTAGCTA+TGG | 0.524469 | 3.3:-85803025 | MS.gene012821:CDS |
| TCAGCAGAAGAAACAGCGTC+AGG | 0.524572 | 3.3:+85806436 | None:intergenic |
| ATAGGCCGCTTGGGAGGTAG+GGG | 0.527994 | 3.3:+85803282 | None:intergenic |
| GCCTTGCTGGGCAACAGTAG+TGG | 0.528254 | 3.3:+85803351 | None:intergenic |
| GCACCAGTGCAACCAGGGTA+TGG | 0.529757 | 3.3:-85803070 | MS.gene012821:CDS |
| AGTTCGATGTCCGTGGCGGT+GGG | 0.530955 | 3.3:+85806808 | None:intergenic |
| ATCCCGACCACCGTCTAGCT+GGG | 0.531596 | 3.3:-85803878 | MS.gene012821:CDS |
| AACAAGCTGGTTATGGCTAT+GGG | 0.531625 | 3.3:-85803834 | MS.gene012821:CDS |
| AGTCGATTGGTCCCAGTTGG+CGG | 0.531961 | 3.3:+85803720 | None:intergenic |
| TATCCACCGGGTTGCTGAGG+AGG | 0.532429 | 3.3:+85803745 | None:intergenic |
| TCCTCTGGTTATAGGCAACC+TGG | 0.532856 | 3.3:-85803565 | MS.gene012821:CDS |
| GTCAGCATATCCCTCTAGCC+AGG | 0.533284 | 3.3:-85803137 | MS.gene012821:CDS |
| GAGCCCAGCTAGACGGTGGT+CGG | 0.534258 | 3.3:+85803875 | None:intergenic |
| GGTGGAGTCTGGCCATAGCT+AGG | 0.535763 | 3.3:+85803013 | None:intergenic |
| GGTGTTCTTATTGGTAAAGG+AGG | 0.535918 | 3.3:-85806568 | MS.gene012821:CDS |
| GCAGACCCATCAGCTGGCTG+TGG | 0.536196 | 3.3:+85803610 | None:intergenic |
| GCTGAAGCTGGGGCTTCTGG+CGG | 0.536744 | 3.3:-85805467 | MS.gene012821:CDS |
| GGATATGCTCAGCCAGAGTT+AGG | 0.536855 | 3.3:-85803103 | MS.gene012821:CDS |
| GCAGGAGGAGCCCAGCTAGA+CGG | 0.538714 | 3.3:+85803868 | None:intergenic |
| TTATTAACTAGGCTGAAGCT+GGG | 0.541792 | 3.3:-85805478 | MS.gene012821:intron |
| GCTGCTCCTGCACAACAAGC+TGG | 0.542982 | 3.3:-85803847 | MS.gene012821:CDS |
| TCTGCTCCCAGTTATGGCAG+TGG | 0.543356 | 3.3:-85803445 | MS.gene012821:CDS |
| ATGCCTCAGCCACCATATGC+AGG | 0.544233 | 3.3:-85803772 | MS.gene012821:CDS |
| AGAGTATGCAAGCTTCTACC+GGG | 0.546430 | 3.3:-85805243 | MS.gene012821:CDS |
| GCTGGGCAACAGTAGTGGGT+TGG | 0.546458 | 3.3:+85803356 | None:intergenic |
| GCTCGTCTTCTCAGCGTCAC+CGG | 0.548114 | 3.3:-85806745 | MS.gene012821:CDS |
| TTTCTGTTGATGTATCACCT+GGG | 0.548846 | 3.3:+85805020 | None:intergenic |
| CTGATCCTAATTCTCAGACT+AGG | 0.549418 | 3.3:-85806480 | MS.gene012821:CDS |
| TGAGGAGGATAGCCTGCATA+TGG | 0.549695 | 3.3:+85803760 | None:intergenic |
| CAGAGAGCACCAGTGCAACC+AGG | 0.550434 | 3.3:-85803076 | MS.gene012821:CDS |
| TAAGCAGGTGGATTTGCACT+TGG | 0.550457 | 3.3:+85803202 | None:intergenic |
| TAGCGATGGAGCAACTGCAC+AGG | 0.553254 | 3.3:-85802936 | MS.gene012821:CDS |
| TAGCCTGCATATGGTGGCTG+AGG | 0.553849 | 3.3:+85803769 | None:intergenic |
| GGACCATACCCTGGTTGCAC+TGG | 0.555058 | 3.3:+85803067 | None:intergenic |
| GGCTATCCTCCTCAGCAACC+CGG | 0.555442 | 3.3:-85803751 | MS.gene012821:CDS |
| AGTGGGTTGGGAAGTTTGGG+AGG | 0.555622 | 3.3:+85803369 | None:intergenic |
| AGATTGAAATACCTAATGGT+AGG | 0.556097 | 3.3:-85806594 | MS.gene012821:CDS |
| AAACGAACCAAGTCCGATAA+CGG | 0.556846 | 3.3:-85806697 | MS.gene012821:CDS |
| TTGGTTAATCAAATCCTCAC+TGG | 0.558998 | 3.3:-85804947 | MS.gene012821:CDS |
| CCACAGTCTGGTTATGGACC+TGG | 0.560474 | 3.3:-85803250 | MS.gene012821:CDS |
| GCGCAACAACAATCTGGGTA+TGG | 0.561377 | 3.3:-85803505 | MS.gene012821:CDS |
| CGGTGGATATTCCGCCAACT+GGG | 0.563001 | 3.3:-85803731 | MS.gene012821:CDS |
| GAGGGAGGAGCACCATAACC+AGG | 0.563328 | 3.3:+85803232 | None:intergenic |
| CTCAGAAATTCAGGGAACTC+AGG | 0.566464 | 3.3:-85803925 | MS.gene012821:CDS |
| GCTCCATCGCTAGCATACGC+TGG | 0.567046 | 3.3:+85802947 | None:intergenic |
| CTGTATGCAGACCCATCAGC+TGG | 0.570591 | 3.3:+85803604 | None:intergenic |
| CACTTGCATGAGTAGACTGC+TGG | 0.572808 | 3.3:+85803686 | None:intergenic |
| TAAGAATCAAACCCCGATTG+TGG | 0.574402 | 3.3:+85806670 | None:intergenic |
| TAGCTAGGCTGGCCACCTTG+AGG | 0.574664 | 3.3:+85803028 | None:intergenic |
| GTAGGAGAGTGGTGGAGCGC+CGG | 0.574920 | 3.3:+85806726 | None:intergenic |
| CCTTGCTGGGCAACAGTAGT+GGG | 0.574987 | 3.3:+85803352 | None:intergenic |
| AGAATCGTCTCAGAAATTCA+GGG | 0.575702 | 3.3:-85803933 | MS.gene012821:CDS |
| GGGAGTAATCCAACCCAAGA+GGG | 0.576300 | 3.3:-85803424 | MS.gene012821:CDS |
| GGCTGAGCATATCCAGAAGG+CGG | 0.579823 | 3.3:+85803112 | None:intergenic |
| GCTCCAGCGTATGCTAGCGA+TGG | 0.580238 | 3.3:-85802950 | MS.gene012821:CDS |
| GGCATGTTATACTGCGGTGA+TGG | 0.581623 | 3.3:+85803790 | None:intergenic |
| CAATCATATGGTGCTCCTCA+AGG | 0.582124 | 3.3:-85803043 | MS.gene012821:CDS |
| GAATATCCACCGGGTTGCTG+AGG | 0.583120 | 3.3:+85803742 | None:intergenic |
| TGAGTAGACTGCTGGTGAGA+TGG | 0.584276 | 3.3:+85803694 | None:intergenic |
| GCTACCCCATAACCTGGTTG+AGG | 0.585519 | 3.3:+85803304 | None:intergenic |
| GATTGAAATACCTAATGGTA+GGG | 0.585821 | 3.3:-85806593 | MS.gene012821:CDS |
| AGCAGTCGATTGGTCCCAGT+TGG | 0.586343 | 3.3:+85803717 | None:intergenic |
| GGGCAACCTGGATCATACTC+TGG | 0.588895 | 3.3:-85803814 | MS.gene012821:CDS |
| TGGCGGTGGCACTAGACGGA+TGG | 0.589779 | 3.3:-85805450 | MS.gene012821:CDS |
| CCCACTACTGTTGCCCAGCA+AGG | 0.593544 | 3.3:-85803352 | MS.gene012821:CDS |
| GGTTATAGGCAACCTGGACA+GGG | 0.595134 | 3.3:-85803559 | MS.gene012821:CDS |
| TTACTCCCACTGCCATAACT+GGG | 0.595665 | 3.3:+85803439 | None:intergenic |
| AACTCCTCAACCAGGTTATG+GGG | 0.596098 | 3.3:-85803308 | MS.gene012821:CDS |
| ATAATGCGCAACAACAATCT+GGG | 0.598425 | 3.3:-85803510 | MS.gene012821:CDS |
| CGTTTGGGATCGTAGGAGAG+TGG | 0.599323 | 3.3:+85806715 | None:intergenic |
| ACGGATGGTTGCACAATCTG+GGG | 0.600123 | 3.3:-85805435 | MS.gene012821:CDS |
| TGTTGTGCAGGAGCAGCAGG+AGG | 0.605854 | 3.3:+85803853 | None:intergenic |
| GACTGTGATTGACCATAAGC+AGG | 0.606917 | 3.3:+85803187 | None:intergenic |
| GAAAACCTGAATTCGTGCCC+CGG | 0.608473 | 3.3:+85805225 | None:intergenic |
| TCCTAATTCTCAGACTAGGA+TGG | 0.609354 | 3.3:-85806476 | MS.gene012821:CDS |
| CAGTTGGCGGAATATCCACC+GGG | 0.609806 | 3.3:+85803733 | None:intergenic |
| GGTGAGATGGAGCAGTCGAT+TGG | 0.609946 | 3.3:+85803707 | None:intergenic |
| CCACCTTGCTGCGAGTATTG+CGG | 0.611213 | 3.3:+85806637 | None:intergenic |
| GAGTATGCAAGCTTCTACCG+GGG | 0.611864 | 3.3:-85805242 | MS.gene012821:CDS |
| TAAGAACTATTTCCATATGA+CGG | 0.615919 | 3.3:+85802992 | None:intergenic |
| CATCAATGAAGTCCTTGCTG+AGG | 0.616712 | 3.3:-85806407 | MS.gene012821:intron |
| GGTTATGGTCAGGAAAGCTA+TGG | 0.616846 | 3.3:-85803538 | MS.gene012821:CDS |
| TTGGGATCGTAGGAGAGTGG+TGG | 0.618282 | 3.3:+85806718 | None:intergenic |
| GTAGGGGCTACCCCATAACC+TGG | 0.621045 | 3.3:+85803298 | None:intergenic |
| CAGCAGTCTACTCATGCAAG+TGG | 0.623206 | 3.3:-85803685 | MS.gene012821:CDS |
| GGAGGAGCCCAGCTAGACGG+TGG | 0.623688 | 3.3:+85803871 | None:intergenic |
| AGACTGTGGTTGACTTCCAT+AGG | 0.624998 | 3.3:+85803264 | None:intergenic |
| TAATCAAATCCTCACTGGTG+AGG | 0.625790 | 3.3:-85804942 | MS.gene012821:intron |
| TCTGTTGATGTATCACCTGG+GGG | 0.627155 | 3.3:+85805022 | None:intergenic |
| ACTTCCATAGGCCGCTTGGG+AGG | 0.629551 | 3.3:+85803276 | None:intergenic |
| GGAGGATAGCCTGCATATGG+TGG | 0.632205 | 3.3:+85803763 | None:intergenic |
| TATGATTGCGGACCATACCC+TGG | 0.632611 | 3.3:+85803058 | None:intergenic |
| GGCCTTATAATCGGTAAAGG+AGG | 0.635849 | 3.3:-85805277 | MS.gene012821:CDS |
| GACTTCGAGTTCGATGTCCG+TGG | 0.636506 | 3.3:+85806801 | None:intergenic |
| TCAGGTGGTTATACTCAGCA+AGG | 0.636998 | 3.3:-85803907 | MS.gene012821:CDS |
| CAACAAGAAACTCCTCAACC+AGG | 0.638274 | 3.3:-85803316 | MS.gene012821:CDS |
| CAAACATATGATCAGCAACA+AGG | 0.642194 | 3.3:-85803475 | MS.gene012821:CDS |
| TATTAACTAGGCTGAAGCTG+GGG | 0.642830 | 3.3:-85805477 | MS.gene012821:intron |
| CGATGAACAACCCACCGCCA+CGG | 0.645490 | 3.3:-85806818 | MS.gene012821:CDS |
| AAGCCGCAATACTCGCAGCA+AGG | 0.647111 | 3.3:-85806640 | MS.gene012821:CDS |
| GGTTGCCTATAACCAGAGGA+AGG | 0.649293 | 3.3:+85803568 | None:intergenic |
| AGAGAGCACCAGTGCAACCA+GGG | 0.650050 | 3.3:-85803075 | MS.gene012821:CDS |
| ACTGCACAGGCTGTTCCACA+GGG | 0.651647 | 3.3:-85802923 | MS.gene012821:CDS |
| CTGAGCATATCCAGAAGGCG+GGG | 0.654248 | 3.3:+85803114 | None:intergenic |
| TCCAGGTTGCCTATAACCAG+AGG | 0.654374 | 3.3:+85803564 | None:intergenic |
| TCTGGCTGAGCATATCCAGA+AGG | 0.655491 | 3.3:+85803109 | None:intergenic |
| AGAAATTCAGGGAACTCAGG+TGG | 0.665666 | 3.3:-85803922 | MS.gene012821:CDS |
| TGCCTATAACCAGAGGAAGG+AGG | 0.666033 | 3.3:+85803571 | None:intergenic |
| CGGATGGTTGCACAATCTGG+GGG | 0.666739 | 3.3:-85805434 | MS.gene012821:CDS |
| CCAGCAACAGCAAAATCCTG+GGG | 0.670269 | 3.3:-85803638 | MS.gene012821:CDS |
| TGAGGAGCACCATATGATTG+CGG | 0.676376 | 3.3:+85803046 | None:intergenic |
| TTCGAGTTCGATGTCCGTGG+CGG | 0.677834 | 3.3:+85806804 | None:intergenic |
| TGGGAGTAATCCAACCCAAG+AGG | 0.681350 | 3.3:-85803425 | MS.gene012821:CDS |
| ATAACGGTGCTCCACAATCG+GGG | 0.686584 | 3.3:-85806681 | MS.gene012821:CDS |
| GGAGTAATCCAACCCAAGAG+GGG | 0.687207 | 3.3:-85803423 | MS.gene012821:CDS |
| ACTGACCATAGCCTCCTGCA+GGG | 0.691732 | 3.3:+85803158 | None:intergenic |
| CCGCAATACTCGCAGCAAGG+TGG | 0.697265 | 3.3:-85806637 | MS.gene012821:CDS |
| ACTTTAGCAACACTGCCCTG+TGG | 0.699397 | 3.3:+85802908 | None:intergenic |
| CAGTCACCTAGCCCTGCAGG+AGG | 0.703590 | 3.3:-85803169 | MS.gene012821:CDS |
| TCATATGGTGCTCCTCAAGG+TGG | 0.706407 | 3.3:-85803040 | MS.gene012821:CDS |
| GAACTATTTCCATATGACGG+TGG | 0.711749 | 3.3:+85802995 | None:intergenic |
| TGTGATTGACCATAAGCAGG+TGG | 0.719303 | 3.3:+85803190 | None:intergenic |
| TATCCTCCTCAGCAACCCGG+TGG | 0.720805 | 3.3:-85803748 | MS.gene012821:CDS |
| GGTGACGCTGAGAAGACGAG+CGG | 0.728767 | 3.3:+85806747 | None:intergenic |
| CCAGGTCCATAACCAGACTG+TGG | 0.734270 | 3.3:+85803250 | None:intergenic |
| CAGCAACAGCAAAATCCTGG+GGG | 0.736266 | 3.3:-85803637 | MS.gene012821:CDS |
| GGTAGCCCCTACCTCCCAAG+CGG | 0.739424 | 3.3:-85803287 | MS.gene012821:CDS |
| GGCTGAGGCATGTTATACTG+CGG | 0.750903 | 3.3:+85803784 | None:intergenic |
| GATAACATACCTCACCAGTG+AGG | 0.751081 | 3.3:+85804933 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTATGACTAATTTTTAT+TGG | - | chr3.3:85805666-85805685 | MS.gene012821:intron | 10.0% |
| !! | ACAATTACCTTATAAAATTA+TGG | - | chr3.3:85804963-85804982 | MS.gene012821:CDS | 15.0% |
| !! | ATATTGGTAAAAAGTTAAAA+CGG | + | chr3.3:85804676-85804695 | None:intergenic | 15.0% |
| !! | TTAAAATATTTCTTATCGTT+GGG | - | chr3.3:85805322-85805341 | MS.gene012821:intron | 15.0% |
| !!! | AAAATGAATAACAATTTTGT+AGG | + | chr3.3:85805006-85805025 | None:intergenic | 15.0% |
| !!! | AAATGAATAACAATTTTGTA+GGG | + | chr3.3:85805005-85805024 | None:intergenic | 15.0% |
| !!! | AATTTTAAACTTAAGAGATT+TGG | + | chr3.3:85804892-85804911 | None:intergenic | 15.0% |
| !!! | ATCTCTTAAGTTTAAAATTA+TGG | - | chr3.3:85804893-85804912 | MS.gene012821:intron | 15.0% |
| !!! | TCTCTTAAGTTTAAAATTAT+GGG | - | chr3.3:85804894-85804913 | MS.gene012821:intron | 15.0% |
| !!! | TTATAATCATGTTTAGTTTT+AGG | - | chr3.3:85804918-85804937 | MS.gene012821:intron | 15.0% |
| !!! | TTTTTTTATACTCTTGTTTA+CGG | - | chr3.3:85803371-85803390 | MS.gene012821:CDS | 15.0% |
| !! | AAAGAACATTAAAAATCGAT+GGG | - | chr3.3:85804751-85804770 | MS.gene012821:intron | 20.0% |
| !! | CTTAAAATATTTCTTATCGT+TGG | - | chr3.3:85805321-85805340 | MS.gene012821:intron | 20.0% |
| !! | TAATCAATGATATTTCACTA+AGG | + | chr3.3:85803566-85803585 | None:intergenic | 20.0% |
| !! | TATATTATAGTTACAGAATC+AGG | + | chr3.3:85804167-85804186 | None:intergenic | 20.0% |
| !!! | AAAAGGTCCATAATTTTATA+AGG | + | chr3.3:85804973-85804992 | None:intergenic | 20.0% |
| !!! | AAAGTCACTTTCAATTATAA+TGG | - | chr3.3:85805445-85805464 | MS.gene012821:CDS | 20.0% |
| !!! | ACACAATTTTTTGTTTTATC+TGG | - | chr3.3:85804842-85804861 | MS.gene012821:intron | 20.0% |
| !!! | CTTCGTATATTTTTATGTTT+TGG | - | chr3.3:85805747-85805766 | MS.gene012821:intron | 20.0% |
| !!! | TGAAATACATTTTTACTAAC+AGG | + | chr3.3:85804059-85804078 | None:intergenic | 20.0% |
| ! | AAGAAGATTGAAATACCTAA+TGG | - | chr3.3:85803153-85803172 | MS.gene012821:CDS | 25.0% |
| ! | AATAGATGTACACATATAAC+GGG | + | chr3.3:85805726-85805745 | None:intergenic | 25.0% |
| ! | CAATAGATGTACACATATAA+CGG | + | chr3.3:85805727-85805746 | None:intergenic | 25.0% |
| ! | GAAAGAACATTAAAAATCGA+TGG | - | chr3.3:85804750-85804769 | MS.gene012821:intron | 25.0% |
| ! | GTGATTTCAAAACATGAATT+GGG | + | chr3.3:85803532-85803551 | None:intergenic | 25.0% |
| ! | TAAAAAAAAAAACCTCAGCA+AGG | + | chr3.3:85803359-85803378 | None:intergenic | 25.0% |
| ! | TAAATATGCTCAAATGATGT+TGG | - | chr3.3:85804201-85804220 | MS.gene012821:intron | 25.0% |
| ! | TAAGAACTATTTCCATATGA+CGG | + | chr3.3:85806762-85806781 | None:intergenic | 25.0% |
| ! | TACTCAAATGATGTTCAAAT+TGG | - | chr3.3:85803677-85803696 | MS.gene012821:CDS | 25.0% |
| ! | TCAACAAGTCAAAATTCAAA+AGG | + | chr3.3:85805153-85805172 | None:intergenic | 25.0% |
| ! | TCATATGGAAATAGTTCTTA+TGG | - | chr3.3:85806762-85806781 | MS.gene012821:CDS | 25.0% |
| !! | CTAATTTTTATTGGCATCAA+TGG | - | chr3.3:85805675-85805694 | MS.gene012821:intron | 25.0% |
| !!! | ATACGTGTTGTTTATTAACT+AGG | - | chr3.3:85804262-85804281 | MS.gene012821:intron | 25.0% |
| !!! | ATTTCATAGTTTGTTTAAGC+TGG | - | chr3.3:85805496-85805515 | MS.gene012821:intron | 25.0% |
| !!! | ATTTTTATGTTTTGGTACGT+TGG | - | chr3.3:85805755-85805774 | MS.gene012821:intron | 25.0% |
| !!! | TGTTTTGTTTATTCTCGTTT+GGG | - | chr3.3:85804419-85804438 | MS.gene012821:intron | 25.0% |
| !!! | TTTATCTGGCTTATCATTTT+TGG | - | chr3.3:85804856-85804875 | MS.gene012821:intron | 25.0% |
| !!! | TTTTTATGTTTTGGTACGTT+GGG | - | chr3.3:85805756-85805775 | MS.gene012821:intron | 25.0% |
| AAATACCAAACAATAAGGTG+TGG | - | chr3.3:85804357-85804376 | MS.gene012821:intron | 30.0% | |
| AATACCAAACAATAAGGTGT+GGG | - | chr3.3:85804358-85804377 | MS.gene012821:intron | 30.0% | |
| AATTGAATCAGCAAAGCAAT+TGG | - | chr3.3:85804785-85804804 | MS.gene012821:intron | 30.0% | |
| ACTGTAATTCTTACTAGTCA+GGG | - | chr3.3:85803427-85803446 | MS.gene012821:CDS | 30.0% | |
| AGATTGAAATACCTAATGGT+AGG | - | chr3.3:85803157-85803176 | MS.gene012821:CDS | 30.0% | |
| AGGATTGTTTCAATGTACTT+GGG | - | chr3.3:85805549-85805568 | MS.gene012821:intron | 30.0% | |
| ATTGAAAGTGACTTTAACGT+AGG | + | chr3.3:85805440-85805459 | None:intergenic | 30.0% | |
| CCTGAAAAAATTGACGATAT+TGG | + | chr3.3:85804692-85804711 | None:intergenic | 30.0% | |
| CTCAAATGATGTTTCAATGA+CGG | - | chr3.3:85803775-85803794 | MS.gene012821:CDS | 30.0% | |
| GATGCAAATACCAAACAATA+AGG | - | chr3.3:85804352-85804371 | MS.gene012821:intron | 30.0% | |
| GATTGAAATACCTAATGGTA+GGG | - | chr3.3:85803158-85803177 | MS.gene012821:CDS | 30.0% | |
| GGTAAAAAGTTAAAACGGAT+AGG | + | chr3.3:85804671-85804690 | None:intergenic | 30.0% | |
| GGTGATTTCAAAACATGAAT+TGG | + | chr3.3:85803533-85803552 | None:intergenic | 30.0% | |
| TACTGTAATTCTTACTAGTC+AGG | - | chr3.3:85803426-85803445 | MS.gene012821:CDS | 30.0% | |
| TCATATGCTCAACTTTCATT+CGG | - | chr3.3:85805345-85805364 | MS.gene012821:intron | 30.0% | |
| TCTAATCTTGCACAATTTCA+TGG | - | chr3.3:85803893-85803912 | MS.gene012821:CDS | 30.0% | |
| TGAGTTATCATGGTTTCATT+TGG | + | chr3.3:85805090-85805109 | None:intergenic | 30.0% | |
| TTGGTGAAACATTCACTAAT+AGG | - | chr3.3:85803948-85803967 | MS.gene012821:intron | 30.0% | |
| TTTCACTAAGGTAACAGTTA+CGG | + | chr3.3:85803554-85803573 | None:intergenic | 30.0% | |
| ! | CTCCACCTTTTGTAAAAATA+AGG | - | chr3.3:85805031-85805050 | MS.gene012821:CDS | 30.0% |
| ! | CTGATTTGATAACTGTTGTA+TGG | - | chr3.3:85803599-85803618 | MS.gene012821:CDS | 30.0% |
| !! | TTGCTGATTCAATTTGATCA+GGG | + | chr3.3:85804779-85804798 | None:intergenic | 30.0% |
| !! | TTTGCTGATTCAATTTGATC+AGG | + | chr3.3:85804780-85804799 | None:intergenic | 30.0% |
| !!! | ATTCGGTTTAGTTTTATCCT+TGG | - | chr3.3:85805362-85805381 | MS.gene012821:intron | 30.0% |
| !!! | CAAAGTGCTGTCTAATTTTA+TGG | + | chr3.3:85805189-85805208 | None:intergenic | 30.0% |
| !!! | CACCTTATTTTTACAAAAGG+TGG | + | chr3.3:85805036-85805055 | None:intergenic | 30.0% |
| !!! | CCAATATCGTCAATTTTTTC+AGG | - | chr3.3:85804689-85804708 | MS.gene012821:intron | 30.0% |
| !!! | GAGCACCTTATTTTTACAAA+AGG | + | chr3.3:85805039-85805058 | None:intergenic | 30.0% |
| !!! | GTGTTTTGTTTATTCTCGTT+TGG | - | chr3.3:85804418-85804437 | MS.gene012821:intron | 30.0% |
| !!! | TTCGGTTTAGTTTTATCCTT+GGG | - | chr3.3:85805363-85805382 | MS.gene012821:intron | 30.0% |
| AAAACACCTCTTATCAGTGA+TGG | + | chr3.3:85804142-85804161 | None:intergenic | 35.0% | |
| AAGTATCTTCAGATGCAATC+TGG | - | chr3.3:85803216-85803235 | MS.gene012821:CDS | 35.0% | |
| AATCGACAGAAACACACAAA+TGG | + | chr3.3:85805284-85805303 | None:intergenic | 35.0% | |
| ACTAGGATGGTTGAACTTAT+GGG | - | chr3.3:85803288-85803307 | MS.gene012821:CDS | 35.0% | |
| AGAATCGTCTCAGAAATTCA+GGG | - | chr3.3:85805818-85805837 | MS.gene012821:intron | 35.0% | |
| ATAATGCGCAACAACAATCT+GGG | - | chr3.3:85806241-85806260 | MS.gene012821:intron | 35.0% | |
| ATACCAAACAATAAGGTGTG+GGG | - | chr3.3:85804359-85804378 | MS.gene012821:intron | 35.0% | |
| ATGACTGTAACTTTACCTCT+TGG | - | chr3.3:85803929-85803948 | MS.gene012821:CDS | 35.0% | |
| CAAACAAAATCTAACAGCCA+GGG | + | chr3.3:85805243-85805262 | None:intergenic | 35.0% | |
| CAAACATATGATCAGCAACA+AGG | - | chr3.3:85806276-85806295 | MS.gene012821:intron | 35.0% | |
| CAGTCAGATACAACAAAATC+AGG | + | chr3.3:85803714-85803733 | None:intergenic | 35.0% | |
| CTGTTGTATGGAGTTTCAAT+AGG | - | chr3.3:85803611-85803630 | MS.gene012821:CDS | 35.0% | |
| GAGGATTGTTTCAATGTACT+TGG | - | chr3.3:85805548-85805567 | MS.gene012821:intron | 35.0% | |
| GGATTGTTTCAATGTACTTG+GGG | - | chr3.3:85805550-85805569 | MS.gene012821:intron | 35.0% | |
| GGTTTCTTGTGTGAATCTTT+AGG | - | chr3.3:85804449-85804468 | MS.gene012821:intron | 35.0% | |
| TATAATGCGCAACAACAATC+TGG | - | chr3.3:85806240-85806259 | MS.gene012821:intron | 35.0% | |
| TATGATCAGCAACAAGGTTA+TGG | - | chr3.3:85806282-85806301 | MS.gene012821:intron | 35.0% | |
| TATTGGCATCAATGGAAATG+AGG | - | chr3.3:85805683-85805702 | MS.gene012821:intron | 35.0% | |
| TCAAACAAAATCTAACAGCC+AGG | + | chr3.3:85805244-85805263 | None:intergenic | 35.0% | |
| TCTTGTGTGAATCTTTAGGT+TGG | - | chr3.3:85804453-85804472 | MS.gene012821:intron | 35.0% | |
| TGAAGTACGGTCTGTATATT+TGG | - | chr3.3:85805578-85805597 | MS.gene012821:intron | 35.0% | |
| TGATGTTTCAATGACGGTAA+AGG | - | chr3.3:85803781-85803800 | MS.gene012821:CDS | 35.0% | |
| TGCTCAAATGATGTTGGAAT+TGG | - | chr3.3:85804207-85804226 | MS.gene012821:intron | 35.0% | |
| TGTTGCTGATCATATGTTTG+TGG | + | chr3.3:85806276-85806295 | None:intergenic | 35.0% | |
| TTAGTGAATGTTTCACCAAG+AGG | + | chr3.3:85803947-85803966 | None:intergenic | 35.0% | |
| TTATTAACTAGGCTGAAGCT+GGG | - | chr3.3:85804273-85804292 | MS.gene012821:intron | 35.0% | |
| TTGGTTAATCAAATCCTCAC+TGG | - | chr3.3:85804804-85804823 | MS.gene012821:intron | 35.0% | |
| TTGTAGGGACTAAAGTCAAA+AGG | + | chr3.3:85804990-85805009 | None:intergenic | 35.0% | |
| TTTATTAACTAGGCTGAAGC+TGG | - | chr3.3:85804272-85804291 | MS.gene012821:intron | 35.0% | |
| TTTCCCATACTTGCTCTTTA+GGG | - | chr3.3:85805607-85805626 | MS.gene012821:intron | 35.0% | |
| TTTCTGTTGATGTATCACCT+GGG | + | chr3.3:85804734-85804753 | None:intergenic | 35.0% | |
| ! | GATTCAAGTTACTCGTGATA+TGG | - | chr3.3:85803245-85803264 | MS.gene012821:CDS | 35.0% |
| ! | GTTGGTGTTCTTATTGGTAA+AGG | - | chr3.3:85803180-85803199 | MS.gene012821:CDS | 35.0% |
| ! | TTCATCGTACTTGCGTTTTA+GGG | + | chr3.3:85802920-85802939 | None:intergenic | 35.0% |
| !! | AGGTGCTCATATTTTTACAG+TGG | - | chr3.3:85805051-85805070 | MS.gene012821:intron | 35.0% |
| !! | CTTTAGGTTGGCCTTATAAT+CGG | - | chr3.3:85804465-85804484 | MS.gene012821:intron | 35.0% |
| !! | TGCTGATTCAATTTGATCAG+GGG | + | chr3.3:85804778-85804797 | None:intergenic | 35.0% |
| !!! | TCTGGCTTATCATTTTTGGT+TGG | - | chr3.3:85804860-85804879 | MS.gene012821:intron | 35.0% |
| AAACGAACCAAGTCCGATAA+CGG | - | chr3.3:85803054-85803073 | MS.gene012821:CDS | 40.0% | |
| AAACTCCTCAACCAGGTTAT+GGG | - | chr3.3:85806442-85806461 | MS.gene012821:CDS | 40.0% | |
| AAATCCAAGTCATGAGAGTC+GGG | + | chr3.3:85804648-85804667 | None:intergenic | 40.0% | |
| AACAAGCTGGTTATGGCTAT+GGG | - | chr3.3:85805917-85805936 | MS.gene012821:intron | 40.0% | |
| AACTTCTTGAGCTCGTTGTT+TGG | + | chr3.3:85802983-85803002 | None:intergenic | 40.0% | |
| ACCATCCTAGTCTGAGAATT+AGG | + | chr3.3:85803279-85803298 | None:intergenic | 40.0% | |
| ACTCCCTAAAGAGCAAGTAT+GGG | + | chr3.3:85805613-85805632 | None:intergenic | 40.0% | |
| ATCTGCTTGTGATCCATAGT+TGG | + | chr3.3:85806361-85806380 | None:intergenic | 40.0% | |
| ATGTCTCTATTTATGTGCCC+TGG | - | chr3.3:85805223-85805242 | MS.gene012821:intron | 40.0% | |
| CAGAATCGTCTCAGAAATTC+AGG | - | chr3.3:85805817-85805836 | MS.gene012821:intron | 40.0% | |
| CTGATCCTAATTCTCAGACT+AGG | - | chr3.3:85803271-85803290 | MS.gene012821:CDS | 40.0% | |
| CTTTCTGTTGATGTATCACC+TGG | + | chr3.3:85804735-85804754 | None:intergenic | 40.0% | |
| GAAACCATGATAACTCAGAC+TGG | - | chr3.3:85805093-85805112 | MS.gene012821:intron | 40.0% | |
| GAAATACCTAATGGTAGGGT+TGG | - | chr3.3:85803162-85803181 | MS.gene012821:CDS | 40.0% | |
| GAAATCCAAGTCATGAGAGT+CGG | + | chr3.3:85804649-85804668 | None:intergenic | 40.0% | |
| GAACTATTTCCATATGACGG+TGG | + | chr3.3:85806759-85806778 | None:intergenic | 40.0% | |
| GACTAGGATGGTTGAACTTA+TGG | - | chr3.3:85803287-85803306 | MS.gene012821:CDS | 40.0% | |
| GAGAAAATATATCCAGCTGC+AGG | - | chr3.3:85804381-85804400 | MS.gene012821:intron | 40.0% | |
| GGTGTTCTTATTGGTAAAGG+AGG | - | chr3.3:85803183-85803202 | MS.gene012821:CDS | 40.0% | |
| GTTTCCCATACTTGCTCTTT+AGG | - | chr3.3:85805606-85805625 | MS.gene012821:intron | 40.0% | |
| TAAGAATCAAACCCCGATTG+TGG | + | chr3.3:85803084-85803103 | None:intergenic | 40.0% | |
| TAATCAAATCCTCACTGGTG+AGG | - | chr3.3:85804809-85804828 | MS.gene012821:intron | 40.0% | |
| TACTCCCTAAAGAGCAAGTA+TGG | + | chr3.3:85805614-85805633 | None:intergenic | 40.0% | |
| TATTAACTAGGCTGAAGCTG+GGG | - | chr3.3:85804274-85804293 | MS.gene012821:intron | 40.0% | |
| TCCTAATTCTCAGACTAGGA+TGG | - | chr3.3:85803275-85803294 | MS.gene012821:CDS | 40.0% | |
| TTCTGTTGATGTATCACCTG+GGG | + | chr3.3:85804733-85804752 | None:intergenic | 40.0% | |
| TTGAGGAGTTTCTTGTTGGT+TGG | + | chr3.3:85806433-85806452 | None:intergenic | 40.0% | |
| ! | AAGAGTATGCAAGCTTCTAC+CGG | - | chr3.3:85804507-85804526 | MS.gene012821:intron | 40.0% |
| ! | CTCCTCCTTTACCGATTATA+AGG | + | chr3.3:85804479-85804498 | None:intergenic | 40.0% |
| ! | GTTCATCGTACTTGCGTTTT+AGG | + | chr3.3:85802921-85802940 | None:intergenic | 40.0% |
| ! | TATTCTCGTTTGGGTTCATG+TGG | - | chr3.3:85804428-85804447 | MS.gene012821:intron | 40.0% |
| ! | TTAAGCTGGCCTGTTAGATT+GGG | - | chr3.3:85805510-85805529 | MS.gene012821:intron | 40.0% |
| ! | TTATCGGACTTGGTTCGTTT+GGG | + | chr3.3:85803054-85803073 | None:intergenic | 40.0% |
| ! | TTATGGTGCTAGTTATGCTC+AGG | - | chr3.3:85806779-85806798 | MS.gene012821:CDS | 40.0% |
| ! | TTTAAGCTGGCCTGTTAGAT+TGG | - | chr3.3:85805509-85805528 | MS.gene012821:intron | 40.0% |
| !! | ATTTGCACTTGGCTTTTGAG+AGG | + | chr3.3:85806541-85806560 | None:intergenic | 40.0% |
| !! | GTTGGCCTTATAATCGGTAA+AGG | - | chr3.3:85804471-85804490 | MS.gene012821:intron | 40.0% |
| !! | TTTGCACTTGGCTTTTGAGA+GGG | + | chr3.3:85806540-85806559 | None:intergenic | 40.0% |
| !!! | GGGCGAGCATTTTTAATTTG+TGG | - | chr3.3:85805776-85805795 | MS.gene012821:intron | 40.0% |
| AACCTCCTTCCTCTGGTTAT+AGG | - | chr3.3:85806178-85806197 | MS.gene012821:intron | 45.0% | |
| AACTCCTCAACCAGGTTATG+GGG | - | chr3.3:85806443-85806462 | MS.gene012821:CDS | 45.0% | |
| ACTTGGGGCTTAGTGAAGTA+CGG | - | chr3.3:85805565-85805584 | MS.gene012821:intron | 45.0% | |
| AGAAATTCAGGGAACTCAGG+TGG | - | chr3.3:85805829-85805848 | MS.gene012821:intron | 45.0% | |
| AGAACACCAACCCTACCATT+AGG | + | chr3.3:85803171-85803190 | None:intergenic | 45.0% | |
| AGAGTATGCAAGCTTCTACC+GGG | - | chr3.3:85804508-85804527 | MS.gene012821:intron | 45.0% | |
| AGTCAACCACAGTCTGGTTA+TGG | - | chr3.3:85806495-85806514 | MS.gene012821:CDS | 45.0% | |
| AGTGCAAATCCACCTGCTTA+TGG | - | chr3.3:85806552-85806571 | MS.gene012821:CDS | 45.0% | |
| ATTACTCCCACTGCCATAAC+TGG | + | chr3.3:85806316-85806335 | None:intergenic | 45.0% | |
| CAACAAGAAACTCCTCAACC+AGG | - | chr3.3:85806435-85806454 | MS.gene012821:CDS | 45.0% | |
| CAACAAGCTGGTTATGGCTA+TGG | - | chr3.3:85805916-85805935 | MS.gene012821:intron | 45.0% | |
| CAATCATATGGTGCTCCTCA+AGG | - | chr3.3:85806708-85806727 | MS.gene012821:CDS | 45.0% | |
| CATCAATGAAGTCCTTGCTG+AGG | - | chr3.3:85803344-85803363 | MS.gene012821:CDS | 45.0% | |
| CTCAGAAATTCAGGGAACTC+AGG | - | chr3.3:85805826-85805845 | MS.gene012821:intron | 45.0% | |
| CTGGTTGAGGAGTTTCTTGT+TGG | + | chr3.3:85806437-85806456 | None:intergenic | 45.0% | |
| GAAACTCCTCAACCAGGTTA+TGG | - | chr3.3:85806441-85806460 | MS.gene012821:CDS | 45.0% | |
| GACTGTGATTGACCATAAGC+AGG | + | chr3.3:85806567-85806586 | None:intergenic | 45.0% | |
| GATAACATACCTCACCAGTG+AGG | + | chr3.3:85804821-85804840 | None:intergenic | 45.0% | |
| GGTTATGGTCAGGAAAGCTA+TGG | - | chr3.3:85806213-85806232 | MS.gene012821:intron | 45.0% | |
| GTCTCCAGTCTGAGTTATCA+TGG | + | chr3.3:85805100-85805119 | None:intergenic | 45.0% | |
| GTGCAACCATCACTGATAAG+AGG | - | chr3.3:85804133-85804152 | MS.gene012821:intron | 45.0% | |
| TATGGAAGTCAACCACAGTC+TGG | - | chr3.3:85806489-85806508 | MS.gene012821:CDS | 45.0% | |
| TCAGGTGGTTATACTCAGCA+AGG | - | chr3.3:85805844-85805863 | MS.gene012821:intron | 45.0% | |
| TCTCCCCACACCTTATTGTT+TGG | + | chr3.3:85804365-85804384 | None:intergenic | 45.0% | |
| TCTGGTTATGGACCTGGTTA+TGG | - | chr3.3:85806507-85806526 | MS.gene012821:CDS | 45.0% | |
| TCTGTTGATGTATCACCTGG+GGG | + | chr3.3:85804732-85804751 | None:intergenic | 45.0% | |
| TGTGATTGACCATAAGCAGG+TGG | + | chr3.3:85806564-85806583 | None:intergenic | 45.0% | |
| TTACTCCCACTGCCATAACT+GGG | + | chr3.3:85806315-85806334 | None:intergenic | 45.0% | |
| TTCCCTCAACCCAATCTAAC+AGG | + | chr3.3:85805522-85805541 | None:intergenic | 45.0% | |
| ! | AGACTGTGGTTGACTTCCAT+AGG | + | chr3.3:85806490-85806509 | None:intergenic | 45.0% |
| ! | GACAGCACTTTGAAGACTCT+TGG | - | chr3.3:85805197-85805216 | MS.gene012821:intron | 45.0% |
| ! | GGCCTTATAATCGGTAAAGG+AGG | - | chr3.3:85804474-85804493 | MS.gene012821:intron | 45.0% |
| ! | GTTATCGGACTTGGTTCGTT+TGG | + | chr3.3:85803055-85803074 | None:intergenic | 45.0% |
| ! | TAAGCAGGTGGATTTGCACT+TGG | + | chr3.3:85806552-85806571 | None:intergenic | 45.0% |
| !! | AGTAGTGGGTTGGGAAGTTT+GGG | + | chr3.3:85806388-85806407 | None:intergenic | 45.0% |
| !! | GGTAGGGTTGGTGTTCTTAT+TGG | - | chr3.3:85803174-85803193 | MS.gene012821:CDS | 45.0% |
| !! | TGAGGAGCACCATATGATTG+CGG | + | chr3.3:85806708-85806727 | None:intergenic | 45.0% |
| !! | TGTTAGATTGGGTTGAGGGA+AGG | - | chr3.3:85805521-85805540 | MS.gene012821:intron | 45.0% |
| ACGGATGGTTGCACAATCTG+GGG | - | chr3.3:85804316-85804335 | MS.gene012821:intron | 50.0% | |
| ACTGGAGACTGCAGTAGCTA+TGG | - | chr3.3:85805111-85805130 | MS.gene012821:intron | 50.0% | |
| ACTTTAGCAACACTGCCCTG+TGG | + | chr3.3:85806846-85806865 | None:intergenic | 50.0% | |
| AGACGGATGGTTGCACAATC+TGG | - | chr3.3:85804314-85804333 | MS.gene012821:intron | 50.0% | |
| ATAACGGTGCTCCACAATCG+GGG | - | chr3.3:85803070-85803089 | MS.gene012821:CDS | 50.0% | |
| CACTTGCATGAGTAGACTGC+TGG | + | chr3.3:85806068-85806087 | None:intergenic | 50.0% | |
| CAGCAACAGCAAAATCCTGG+GGG | - | chr3.3:85806114-85806133 | MS.gene012821:intron | 50.0% | |
| CAGCAGTCTACTCATGCAAG+TGG | - | chr3.3:85806066-85806085 | MS.gene012821:intron | 50.0% | |
| CCAGCAACAGCAAAATCCTG+GGG | - | chr3.3:85806113-85806132 | MS.gene012821:intron | 50.0% | |
| CCCAGCAACAGCAAAATCCT+GGG | - | chr3.3:85806112-85806131 | MS.gene012821:intron | 50.0% | |
| CCTGCACAACAAGCTGGTTA+TGG | - | chr3.3:85805910-85805929 | MS.gene012821:intron | 50.0% | |
| GAAAACCTGAATTCGTGCCC+CGG | + | chr3.3:85804529-85804548 | None:intergenic | 50.0% | |
| GACGGATGGTTGCACAATCT+GGG | - | chr3.3:85804315-85804334 | MS.gene012821:intron | 50.0% | |
| GAGTATGCAAGCTTCTACCG+GGG | - | chr3.3:85804509-85804528 | MS.gene012821:intron | 50.0% | |
| GATGGACCAGAGTATGATCC+AGG | + | chr3.3:85805946-85805965 | None:intergenic | 50.0% | |
| GCGCAACAACAATCTGGGTA+TGG | - | chr3.3:85806246-85806265 | MS.gene012821:intron | 50.0% | |
| GGAGTAATCCAACCCAAGAG+GGG | - | chr3.3:85806328-85806347 | MS.gene012821:intron | 50.0% | |
| GGATATGCTCAGCCAGAGTT+AGG | - | chr3.3:85806648-85806667 | MS.gene012821:CDS | 50.0% | |
| GGCATGTTATACTGCGGTGA+TGG | + | chr3.3:85805964-85805983 | None:intergenic | 50.0% | |
| GGCTGAGGCATGTTATACTG+CGG | + | chr3.3:85805970-85805989 | None:intergenic | 50.0% | |
| GGGAGTAATCCAACCCAAGA+GGG | - | chr3.3:85806327-85806346 | MS.gene012821:intron | 50.0% | |
| GGGTATGGTCCGCAATCATA+TGG | - | chr3.3:85806696-85806715 | MS.gene012821:CDS | 50.0% | |
| GGTTATAGGCAACCTGGACA+GGG | - | chr3.3:85806192-85806211 | MS.gene012821:intron | 50.0% | |
| GGTTGCCTATAACCAGAGGA+AGG | + | chr3.3:85806186-85806205 | None:intergenic | 50.0% | |
| GTAGATGAGCACAAGTCCCA+AGG | + | chr3.3:85805382-85805401 | None:intergenic | 50.0% | |
| TACAGTCAACCTCCTTCCTC+TGG | - | chr3.3:85806171-85806190 | MS.gene012821:intron | 50.0% | |
| TATGATTGCGGACCATACCC+TGG | + | chr3.3:85806696-85806715 | None:intergenic | 50.0% | |
| TCAGCAGAAGAAACAGCGTC+AGG | + | chr3.3:85803318-85803337 | None:intergenic | 50.0% | |
| TCATATGGTGCTCCTCAAGG+TGG | - | chr3.3:85806711-85806730 | MS.gene012821:CDS | 50.0% | |
| TCCAGGTTGCCTATAACCAG+AGG | + | chr3.3:85806190-85806209 | None:intergenic | 50.0% | |
| TCCTCTGGTTATAGGCAACC+TGG | - | chr3.3:85806186-85806205 | MS.gene012821:intron | 50.0% | |
| TCGCAGCAAGGTGGTAGTTA+TGG | - | chr3.3:85803123-85803142 | MS.gene012821:CDS | 50.0% | |
| TCTGGCTGAGCATATCCAGA+AGG | + | chr3.3:85806645-85806664 | None:intergenic | 50.0% | |
| TGAGGAGGATAGCCTGCATA+TGG | + | chr3.3:85805994-85806013 | None:intergenic | 50.0% | |
| TGAGTAGACTGCTGGTGAGA+TGG | + | chr3.3:85806060-85806079 | None:intergenic | 50.0% | |
| TGCCTATAACCAGAGGAAGG+AGG | + | chr3.3:85806183-85806202 | None:intergenic | 50.0% | |
| TGGGAGTAATCCAACCCAAG+AGG | - | chr3.3:85806326-85806345 | MS.gene012821:intron | 50.0% | |
| TGGTTATAGGCAACCTGGAC+AGG | - | chr3.3:85806191-85806210 | MS.gene012821:intron | 50.0% | |
| TTCCATATGACGGTGGAGTC+TGG | + | chr3.3:85806752-85806771 | None:intergenic | 50.0% | |
| TTGACTTCCATAGGCCGCTT+GGG | + | chr3.3:85806481-85806500 | None:intergenic | 50.0% | |
| ! | CGATAACGGTGCTCCACAAT+CGG | - | chr3.3:85803068-85803087 | MS.gene012821:CDS | 50.0% |
| ! | CTTGGTTCGTTTGGGATCGT+AGG | + | chr3.3:85803046-85803065 | None:intergenic | 50.0% |
| ! | GATAACGGTGCTCCACAATC+GGG | - | chr3.3:85803069-85803088 | MS.gene012821:CDS | 50.0% |
| ! | TATGGCTCTGCTCCCAGTTA+TGG | - | chr3.3:85806300-85806319 | MS.gene012821:intron | 50.0% |
| ! | TGGCCTGTTAGATTGGGTTG+AGG | - | chr3.3:85805516-85805535 | MS.gene012821:intron | 50.0% |
| !! | CAGTAGTGGGTTGGGAAGTT+TGG | + | chr3.3:85806389-85806408 | None:intergenic | 50.0% |
| !! | CCATAACCAGCTTGTTGTGC+AGG | + | chr3.3:85805913-85805932 | None:intergenic | 50.0% |
| !! | CGATTGTGGAGCACCGTTAT+CGG | + | chr3.3:85803070-85803089 | None:intergenic | 50.0% |
| !! | GGCCTGTTAGATTGGGTTGA+GGG | - | chr3.3:85805517-85805536 | MS.gene012821:intron | 50.0% |
| !! | GTTGGTAGCATAGCCTTGCT+GGG | + | chr3.3:85806415-85806434 | None:intergenic | 50.0% |
| !! | TTTGCTGTTGCTGGGGTTGT+TGG | + | chr3.3:85806107-85806126 | None:intergenic | 50.0% |
| !!! | CCAGGATTTTGCTGTTGCTG+GGG | + | chr3.3:85806114-85806133 | None:intergenic | 50.0% |
| !!! | CCCAGGATTTTGCTGTTGCT+GGG | + | chr3.3:85806115-85806134 | None:intergenic | 50.0% |
| AACTGCACAGGCTGTTCCAC+AGG | - | chr3.3:85806827-85806846 | MS.gene012821:CDS | 55.0% | |
| AAGCCGCAATACTCGCAGCA+AGG | - | chr3.3:85803111-85803130 | MS.gene012821:CDS | 55.0% | |
| ACCTGGACAGGGTTATGGTC+AGG | - | chr3.3:85806203-85806222 | MS.gene012821:intron | 55.0% | |
| ACTGACCATAGCCTCCTGCA+GGG | + | chr3.3:85806596-85806615 | None:intergenic | 55.0% | |
| ACTGCACAGGCTGTTCCACA+GGG | - | chr3.3:85806828-85806847 | MS.gene012821:CDS | 55.0% | |
| ACTGCCCGACTCTCATGACT+TGG | - | chr3.3:85804641-85804660 | MS.gene012821:intron | 55.0% | |
| AGGCAACCTGGACAGGGTTA+TGG | - | chr3.3:85806198-85806217 | MS.gene012821:intron | 55.0% | |
| AGTCATGAGAGTCGGGCAGT+CGG | + | chr3.3:85804641-85804660 | None:intergenic | 55.0% | |
| ATACCTTTGCATCCTCCCCC+AGG | - | chr3.3:85804714-85804733 | MS.gene012821:intron | 55.0% | |
| ATGCCTCAGCCACCATATGC+AGG | - | chr3.3:85805979-85805998 | MS.gene012821:intron | 55.0% | |
| CAGTTGGCGGAATATCCACC+GGG | + | chr3.3:85806021-85806040 | None:intergenic | 55.0% | |
| CCACAGTCTGGTTATGGACC+TGG | - | chr3.3:85806501-85806520 | MS.gene012821:CDS | 55.0% | |
| CCAGGTCCATAACCAGACTG+TGG | + | chr3.3:85806504-85806523 | None:intergenic | 55.0% | |
| CCAGTTGGCGGAATATCCAC+CGG | + | chr3.3:85806022-85806041 | None:intergenic | 55.0% | |
| CCCCAGCAACAGCAAAATCC+TGG | - | chr3.3:85806111-85806130 | MS.gene012821:intron | 55.0% | |
| CCTTGCTGGGCAACAGTAGT+GGG | + | chr3.3:85806402-85806421 | None:intergenic | 55.0% | |
| CGGATGGTTGCACAATCTGG+GGG | - | chr3.3:85804317-85804336 | MS.gene012821:intron | 55.0% | |
| CGGTGGATATTCCGCCAACT+GGG | - | chr3.3:85806020-85806039 | MS.gene012821:intron | 55.0% | |
| CTGAGCATATCCAGAAGGCG+GGG | + | chr3.3:85806640-85806659 | None:intergenic | 55.0% | |
| CTGCTCCCAGTTATGGCAGT+GGG | - | chr3.3:85806307-85806326 | MS.gene012821:intron | 55.0% | |
| CTGTATGCAGACCCATCAGC+TGG | + | chr3.3:85806150-85806169 | None:intergenic | 55.0% | |
| GAATATCCACCGGGTTGCTG+AGG | + | chr3.3:85806012-85806031 | None:intergenic | 55.0% | |
| GCTACCCCATAACCTGGTTG+AGG | + | chr3.3:85806450-85806469 | None:intergenic | 55.0% | |
| GCTCTCTGAGTGCCTAACTC+TGG | + | chr3.3:85806663-85806682 | None:intergenic | 55.0% | |
| GCTGAGCATATCCAGAAGGC+GGG | + | chr3.3:85806641-85806660 | None:intergenic | 55.0% | |
| GGAGGATAGCCTGCATATGG+TGG | + | chr3.3:85805991-85806010 | None:intergenic | 55.0% | |
| GGCTGAGCATATCCAGAAGG+CGG | + | chr3.3:85806642-85806661 | None:intergenic | 55.0% | |
| GGGCAACCTGGATCATACTC+TGG | - | chr3.3:85805937-85805956 | MS.gene012821:intron | 55.0% | |
| GGTGAGATGGAGCAGTCGAT+TGG | + | chr3.3:85806047-85806066 | None:intergenic | 55.0% | |
| GGTTATGGCTATGGGCAACC+TGG | - | chr3.3:85805925-85805944 | MS.gene012821:intron | 55.0% | |
| GTCAGCATATCCCTCTAGCC+AGG | - | chr3.3:85806614-85806633 | MS.gene012821:CDS | 55.0% | |
| GTTGATGTATCACCTGGGGG+AGG | + | chr3.3:85804729-85804748 | None:intergenic | 55.0% | |
| TAGCCTGCATATGGTGGCTG+AGG | + | chr3.3:85805985-85806004 | None:intergenic | 55.0% | |
| TAGCGATGGAGCAACTGCAC+AGG | - | chr3.3:85806815-85806834 | MS.gene012821:CDS | 55.0% | |
| TCCTGACCATAACCCTGTCC+AGG | + | chr3.3:85806207-85806226 | None:intergenic | 55.0% | |
| TCTGCTCCCAGTTATGGCAG+TGG | - | chr3.3:85806306-85806325 | MS.gene012821:intron | 55.0% | |
| TTCTACCGGGGCACGAATTC+AGG | - | chr3.3:85804521-85804540 | MS.gene012821:intron | 55.0% | |
| TTGGGATCGTAGGAGAGTGG+TGG | + | chr3.3:85803036-85803055 | None:intergenic | 55.0% | |
| ! | AGCAGTCGATTGGTCCCAGT+TGG | + | chr3.3:85806037-85806056 | None:intergenic | 55.0% |
| ! | AGTCGATTGGTCCCAGTTGG+CGG | + | chr3.3:85806034-85806053 | None:intergenic | 55.0% |
| ! | AGTTGGAAGTGTGCCCCTCT+TGG | + | chr3.3:85806344-85806363 | None:intergenic | 55.0% |
| ! | CCAAAAAGCATGCCTGCAGC+TGG | + | chr3.3:85804396-85804415 | None:intergenic | 55.0% |
| ! | CCACCTTGCTGCGAGTATTG+CGG | + | chr3.3:85803117-85803136 | None:intergenic | 55.0% |
| ! | CCAGCTGCAGGCATGCTTTT+TGG | - | chr3.3:85804393-85804412 | MS.gene012821:intron | 55.0% |
| ! | CGTTTGGGATCGTAGGAGAG+TGG | + | chr3.3:85803039-85803058 | None:intergenic | 55.0% |
| ! | GACTTCGAGTTCGATGTCCG+TGG | + | chr3.3:85802953-85802972 | None:intergenic | 55.0% |
| ! | GAGGGGCACACTTCCAACTA+TGG | - | chr3.3:85806345-85806364 | MS.gene012821:intron | 55.0% |
| ! | GTTGACTTCCATAGGCCGCT+TGG | + | chr3.3:85806482-85806501 | None:intergenic | 55.0% |
| ! | GTTGGAAGTGTGCCCCTCTT+GGG | + | chr3.3:85806343-85806362 | None:intergenic | 55.0% |
| ! | TGGGTTGAGGGAAGGTTGAG+AGG | - | chr3.3:85805529-85805548 | MS.gene012821:intron | 55.0% |
| ! | TTCGAGTTCGATGTCCGTGG+CGG | + | chr3.3:85802950-85802969 | None:intergenic | 55.0% |
| !! | AGAGAGCACCAGTGCAACCA+GGG | - | chr3.3:85806676-85806695 | MS.gene012821:CDS | 55.0% |
| !! | AGTGGGTTGGGAAGTTTGGG+AGG | + | chr3.3:85806385-85806404 | None:intergenic | 55.0% |
| !! | CTGGGCAACAGTAGTGGGTT+GGG | + | chr3.3:85806397-85806416 | None:intergenic | 55.0% |
| !! | GCACTTGGCTTTTGAGAGGG+AGG | + | chr3.3:85806537-85806556 | None:intergenic | 55.0% |
| !! | GGTTGGTAGCATAGCCTTGC+TGG | + | chr3.3:85806416-85806435 | None:intergenic | 55.0% |
| !! | TGGAGCACCGTTATCGGACT+TGG | + | chr3.3:85803064-85803083 | None:intergenic | 55.0% |
| !!! | CCCCAGGATTTTGCTGTTGC+TGG | + | chr3.3:85806116-85806135 | None:intergenic | 55.0% |
| AATCCCGACCACCGTCTAGC+TGG | - | chr3.3:85805872-85805891 | MS.gene012821:intron | 60.0% | |
| ACTTCCATAGGCCGCTTGGG+AGG | + | chr3.3:85806478-85806497 | None:intergenic | 60.0% | |
| AGCTAGACGGTGGTCGGGAT+TGG | + | chr3.3:85805873-85805892 | None:intergenic | 60.0% | |
| AGTTCGATGTCCGTGGCGGT+GGG | + | chr3.3:85802946-85802965 | None:intergenic | 60.0% | |
| ATAGGCCGCTTGGGAGGTAG+GGG | + | chr3.3:85806472-85806491 | None:intergenic | 60.0% | |
| ATCCCGACCACCGTCTAGCT+GGG | - | chr3.3:85805873-85805892 | MS.gene012821:intron | 60.0% | |
| CAAGGTGGCCAGCCTAGCTA+TGG | - | chr3.3:85806726-85806745 | MS.gene012821:CDS | 60.0% | |
| CATAGGCCGCTTGGGAGGTA+GGG | + | chr3.3:85806473-85806492 | None:intergenic | 60.0% | |
| CCCACTACTGTTGCCCAGCA+AGG | - | chr3.3:85806399-85806418 | MS.gene012821:intron | 60.0% | |
| CCGCAATACTCGCAGCAAGG+TGG | - | chr3.3:85803114-85803133 | MS.gene012821:CDS | 60.0% | |
| CCGGTGGATATTCCGCCAAC+TGG | - | chr3.3:85806019-85806038 | MS.gene012821:intron | 60.0% | |
| CGATGAACAACCCACCGCCA+CGG | - | chr3.3:85802933-85802952 | MS.gene012821:CDS | 60.0% | |
| CTTCTGGCGGTGGCACTAGA+CGG | - | chr3.3:85804297-85804316 | MS.gene012821:intron | 60.0% | |
| GAAGTGTGCCCCTCTTGGGT+TGG | + | chr3.3:85806339-85806358 | None:intergenic | 60.0% | |
| GACTGACCATAGCCTCCTGC+AGG | + | chr3.3:85806597-85806616 | None:intergenic | 60.0% | |
| GAGTCTGGCCATAGCTAGGC+TGG | + | chr3.3:85806737-85806756 | None:intergenic | 60.0% | |
| GCACCAGTGCAACCAGGGTA+TGG | - | chr3.3:85806681-85806700 | MS.gene012821:CDS | 60.0% | |
| GCCTTGCTGGGCAACAGTAG+TGG | + | chr3.3:85806403-85806422 | None:intergenic | 60.0% | |
| GCTCCAGCGTATGCTAGCGA+TGG | - | chr3.3:85806801-85806820 | MS.gene012821:CDS | 60.0% | |
| GCTCCATCGCTAGCATACGC+TGG | + | chr3.3:85806807-85806826 | None:intergenic | 60.0% | |
| GCTCGTCTTCTCAGCGTCAC+CGG | - | chr3.3:85803006-85803025 | MS.gene012821:CDS | 60.0% | |
| GCTGCTCCTGCACAACAAGC+TGG | - | chr3.3:85805904-85805923 | MS.gene012821:intron | 60.0% | |
| GGACCATACCCTGGTTGCAC+TGG | + | chr3.3:85806687-85806706 | None:intergenic | 60.0% | |
| GGCCAGACTCCACCGTCATA+TGG | - | chr3.3:85806747-85806766 | MS.gene012821:CDS | 60.0% | |
| GGCTATCCTCCTCAGCAACC+CGG | - | chr3.3:85806000-85806019 | MS.gene012821:intron | 60.0% | |
| GGTGACGCTGAGAAGACGAG+CGG | + | chr3.3:85803007-85803026 | None:intergenic | 60.0% | |
| GGTGGAGTCTGGCCATAGCT+AGG | + | chr3.3:85806741-85806760 | None:intergenic | 60.0% | |
| GTAGGGGCTACCCCATAACC+TGG | + | chr3.3:85806456-85806475 | None:intergenic | 60.0% | |
| GTCCTCCACAGCCAGCTGAT+GGG | - | chr3.3:85806136-85806155 | MS.gene012821:intron | 60.0% | |
| TAGGCTGAAGCTGGGGCTTC+TGG | - | chr3.3:85804281-85804300 | MS.gene012821:intron | 60.0% | |
| TATCCACCGGGTTGCTGAGG+AGG | + | chr3.3:85806009-85806028 | None:intergenic | 60.0% | |
| TATCCTCCTCAGCAACCCGG+TGG | - | chr3.3:85806003-85806022 | MS.gene012821:intron | 60.0% | |
| TCACAGTCACCTAGCCCTGC+AGG | - | chr3.3:85806579-85806598 | MS.gene012821:CDS | 60.0% | |
| TCACCTGGGGGAGGATGCAA+AGG | + | chr3.3:85804720-85804739 | None:intergenic | 60.0% | |
| TGTTGTGCAGGAGCAGCAGG+AGG | + | chr3.3:85805901-85805920 | None:intergenic | 60.0% | |
| ! | TAGCTAGGCTGGCCACCTTG+AGG | + | chr3.3:85806726-85806745 | None:intergenic | 60.0% |
| !! | CAGAGAGCACCAGTGCAACC+AGG | - | chr3.3:85806675-85806694 | MS.gene012821:CDS | 60.0% |
| !! | GAGGGAGGAGCACCATAACC+AGG | + | chr3.3:85806522-85806541 | None:intergenic | 60.0% |
| !! | GCTGGGCAACAGTAGTGGGT+TGG | + | chr3.3:85806398-85806417 | None:intergenic | 60.0% |
| !! | GCTTGTTGTGCAGGAGCAGC+AGG | + | chr3.3:85805904-85805923 | None:intergenic | 60.0% |
| AGCCCAGCTAGACGGTGGTC+GGG | + | chr3.3:85805878-85805897 | None:intergenic | 65.0% | |
| CAGTCACCTAGCCCTGCAGG+AGG | - | chr3.3:85806582-85806601 | MS.gene012821:CDS | 65.0% | |
| CATATCCAGAAGGCGGGGCC+TGG | + | chr3.3:85806635-85806654 | None:intergenic | 65.0% | |
| CCATAGCCTCCTGCAGGGCT+AGG | + | chr3.3:85806591-85806610 | None:intergenic | 65.0% | |
| CCATAGGCCGCTTGGGAGGT+AGG | + | chr3.3:85806474-85806493 | None:intergenic | 65.0% | |
| CCTACCTCCCAAGCGGCCTA+TGG | - | chr3.3:85806471-85806490 | MS.gene012821:CDS | 65.0% | |
| CCTAGCCCTGCAGGAGGCTA+TGG | - | chr3.3:85806588-85806607 | MS.gene012821:CDS | 65.0% | |
| GACCCATCAGCTGGCTGTGG+AGG | + | chr3.3:85806141-85806160 | None:intergenic | 65.0% | |
| GAGCCCAGCTAGACGGTGGT+CGG | + | chr3.3:85805879-85805898 | None:intergenic | 65.0% | |
| GAGTTCGATGTCCGTGGCGG+TGG | + | chr3.3:85802947-85802966 | None:intergenic | 65.0% | |
| GCAGACCCATCAGCTGGCTG+TGG | + | chr3.3:85806144-85806163 | None:intergenic | 65.0% | |
| GCAGGAGGAGCCCAGCTAGA+CGG | + | chr3.3:85805886-85805905 | None:intergenic | 65.0% | |
| GCTGAAGCTGGGGCTTCTGG+CGG | - | chr3.3:85804284-85804303 | MS.gene012821:intron | 65.0% | |
| GGTAGCCCCTACCTCCCAAG+CGG | - | chr3.3:85806464-85806483 | MS.gene012821:CDS | 65.0% | |
| GGTCCTCCACAGCCAGCTGA+TGG | - | chr3.3:85806135-85806154 | MS.gene012821:intron | 65.0% | |
| TGGCGGTGGCACTAGACGGA+TGG | - | chr3.3:85804301-85804320 | MS.gene012821:intron | 65.0% | |
| ! | GTAGGAGAGTGGTGGAGCGC+CGG | + | chr3.3:85803028-85803047 | None:intergenic | 65.0% |
| AGAAGGCGGGGCCTGGCTAG+AGG | + | chr3.3:85806628-85806647 | None:intergenic | 70.0% | |
| GAAGCTGGGGCTTCTGGCGG+TGG | - | chr3.3:85804287-85804306 | MS.gene012821:intron | 70.0% | |
| GAAGGCGGGGCCTGGCTAGA+GGG | + | chr3.3:85806627-85806646 | None:intergenic | 70.0% | |
| GGAGGAGCCCAGCTAGACGG+TGG | + | chr3.3:85805883-85805902 | None:intergenic | 70.0% | |
| TCTAGCCAGGCCCCGCCTTC+TGG | - | chr3.3:85806627-85806646 | MS.gene012821:CDS | 70.0% | |
| GCTGGCTGTGGAGGACCCCC+AGG | + | chr3.3:85806132-85806151 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 85802892 | 85806881 | 85802892 | ID=MS.gene012821 |
| chr3.3 | mRNA | 85802892 | 85806881 | 85802892 | ID=MS.gene012821.t1;Parent=MS.gene012821 |
| chr3.3 | exon | 85806408 | 85806881 | 85806408 | ID=MS.gene012821.t1.exon1;Parent=MS.gene012821.t1 |
| chr3.3 | CDS | 85806408 | 85806881 | 85806408 | ID=cds.MS.gene012821.t1;Parent=MS.gene012821.t1 |
| chr3.3 | exon | 85805400 | 85805489 | 85805400 | ID=MS.gene012821.t1.exon2;Parent=MS.gene012821.t1 |
| chr3.3 | CDS | 85805400 | 85805489 | 85805400 | ID=cds.MS.gene012821.t1;Parent=MS.gene012821.t1 |
| chr3.3 | exon | 85805231 | 85805302 | 85805231 | ID=MS.gene012821.t1.exon3;Parent=MS.gene012821.t1 |
| chr3.3 | CDS | 85805231 | 85805302 | 85805231 | ID=cds.MS.gene012821.t1;Parent=MS.gene012821.t1 |
| chr3.3 | exon | 85804943 | 85805062 | 85804943 | ID=MS.gene012821.t1.exon4;Parent=MS.gene012821.t1 |
| chr3.3 | CDS | 85804943 | 85805062 | 85804943 | ID=cds.MS.gene012821.t1;Parent=MS.gene012821.t1 |
| chr3.3 | exon | 85802892 | 85803953 | 85802892 | ID=MS.gene012821.t1.exon5;Parent=MS.gene012821.t1 |
| chr3.3 | CDS | 85802892 | 85803953 | 85802892 | ID=cds.MS.gene012821.t1;Parent=MS.gene012821.t1 |
| Gene Sequence |
| Protein sequence |
