Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013210.t1 | XP_003602731.1 | 98.9 | 541 | 6 | 0 | 1 | 541 | 1 | 541 | 4.70E-218 | 767.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013210.t1 | O82709 | 82.9 | 508 | 73 | 4 | 1 | 496 | 1 | 506 | 1.7e-168 | 594.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013210.t1 | G7J2R7 | 98.9 | 541 | 6 | 0 | 1 | 541 | 1 | 541 | 3.4e-218 | 767.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56457 | MS.gene013210 | PPI |
| MS.gene82400 | MS.gene013210 | PPI |
| MS.gene001347 | MS.gene013210 | PPI |
| MS.gene006869 | MS.gene013210 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013210.t1 | MTR_3g098430 | 98.336 | 541 | 9 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1074 |
| MS.gene013210.t1 | MTR_3g098430 | 97.436 | 546 | 9 | 1 | 1 | 541 | 1 | 546 | 0.0 | 1069 |
| MS.gene013210.t1 | MTR_8g095680 | 77.091 | 550 | 107 | 6 | 1 | 541 | 1 | 540 | 0.0 | 792 |
| MS.gene013210.t1 | MTR_4g068080 | 33.995 | 403 | 198 | 13 | 8 | 402 | 8 | 350 | 1.17e-58 | 201 |
| MS.gene013210.t1 | MTR_1g083960 | 38.421 | 380 | 175 | 11 | 33 | 405 | 26 | 353 | 3.96e-58 | 199 |
| MS.gene013210.t1 | MTR_7g080370 | 34.230 | 409 | 196 | 14 | 1 | 398 | 1 | 347 | 5.93e-57 | 196 |
| MS.gene013210.t1 | MTR_7g080370 | 34.230 | 409 | 196 | 14 | 1 | 398 | 1 | 347 | 1.38e-56 | 195 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013210.t1 | AT5G61790 | 74.765 | 531 | 127 | 3 | 11 | 541 | 7 | 530 | 0.0 | 798 |
| MS.gene013210.t1 | AT5G07340 | 74.951 | 511 | 118 | 3 | 31 | 539 | 27 | 529 | 0.0 | 768 |
| MS.gene013210.t1 | AT5G07340 | 75.197 | 508 | 116 | 3 | 34 | 539 | 38 | 537 | 0.0 | 766 |
| MS.gene013210.t1 | AT1G56340 | 38.702 | 416 | 189 | 14 | 5 | 413 | 3 | 359 | 1.07e-61 | 209 |
| MS.gene013210.t1 | AT1G56340 | 38.702 | 416 | 189 | 14 | 5 | 413 | 3 | 359 | 2.78e-61 | 208 |
| MS.gene013210.t1 | AT1G09210 | 38.861 | 404 | 183 | 13 | 9 | 405 | 5 | 351 | 8.63e-59 | 201 |
| MS.gene013210.t1 | AT1G08450 | 33.333 | 429 | 217 | 13 | 11 | 423 | 8 | 383 | 1.12e-56 | 196 |
| MS.gene013210.t1 | AT1G08450 | 30.023 | 433 | 201 | 13 | 11 | 423 | 8 | 358 | 5.48e-43 | 158 |
| MS.gene013210.t1 | AT1G08450 | 34.454 | 238 | 106 | 6 | 194 | 423 | 134 | 329 | 1.66e-25 | 108 |
Find 182 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTGGCTTTACAGCTTC+TGG | 0.065396 | 3.2:+81655866 | None:intergenic |
| TTACAATAATCTTATCTTTC+TGG | 0.129339 | 3.2:+81655155 | None:intergenic |
| CTGCCATTGGTATTGAAATT+TGG | 0.163969 | 3.2:-81655496 | MS.gene013210:CDS |
| CATTGATAACCCAGCTTATA+AGG | 0.184554 | 3.2:-81655591 | MS.gene013210:CDS |
| AGTGAGGGGCACGATGATTT+TGG | 0.222943 | 3.2:-81656415 | MS.gene013210:CDS |
| GAAAAGGAACCCAGCTTATA+AGG | 0.242385 | 3.2:-81655633 | MS.gene013210:CDS |
| TCAACATACTTTCCAGTCTT+TGG | 0.247163 | 3.2:+81656121 | None:intergenic |
| TGGGTTTCCAACCACTCTCC+TGG | 0.263681 | 3.2:+81656239 | None:intergenic |
| CTCTTTCTCAATGTTAAACT+TGG | 0.276239 | 3.2:+81655385 | None:intergenic |
| GCTCTCTCGTCCCAGTCTTC+TGG | 0.293148 | 3.2:+81655902 | None:intergenic |
| TTCGTCAAGTTCTTTAACTA+TGG | 0.306137 | 3.2:+81656360 | None:intergenic |
| AGAATTCTCACCTCATTATC+AGG | 0.319935 | 3.2:+81656028 | None:intergenic |
| TTTGTTGCCCCGCACCTGTC+TGG | 0.320390 | 3.2:+81656175 | None:intergenic |
| CTCCACTTTCCCTTATAAGC+TGG | 0.323256 | 3.2:+81655623 | None:intergenic |
| ACCCAGCTTATAAGGGTATA+TGG | 0.329615 | 3.2:-81655583 | MS.gene013210:CDS |
| AGCTTCTGGGTCAGGAATCT+TGG | 0.330240 | 3.2:+81655880 | None:intergenic |
| AGAATTCCAATAGTCAGATT+TGG | 0.331821 | 3.2:+81655000 | None:intergenic |
| CAGGGGCTGATTCACACTTT+GGG | 0.332470 | 3.2:+81655681 | None:intergenic |
| GGCTTTACAGCTTCTGGGTC+AGG | 0.336142 | 3.2:+81655872 | None:intergenic |
| TCGTCATCCAACCATTCTTC+AGG | 0.338310 | 3.2:+81655794 | None:intergenic |
| TTCATTCTCTCCACCAGCTT+GGG | 0.340196 | 3.2:+81654762 | None:intergenic |
| TCCTTTCAATTGTCTCGCTT+TGG | 0.350249 | 3.2:+81654694 | None:intergenic |
| CCTCTGGCTTTACAGCTTCT+GGG | 0.362016 | 3.2:+81655867 | None:intergenic |
| ACTATGGCGTACTTCCTTGC+TGG | 0.364602 | 3.2:+81656376 | None:intergenic |
| AGTTCAAAGTACTCTGGGTT+TGG | 0.371725 | 3.2:+81655545 | None:intergenic |
| GGACCAAACATGACAGAATA+TGG | 0.377257 | 3.2:+81656196 | None:intergenic |
| CTCTTCCACTCACCACAGCC+AGG | 0.377474 | 3.2:+81655662 | None:intergenic |
| TCTTCTGGTTTGTTATCATC+AGG | 0.380136 | 3.2:+81655917 | None:intergenic |
| CCAGGGGCTGATTCACACTT+TGG | 0.380770 | 3.2:+81655680 | None:intergenic |
| AAGCAACCAAATCTGACTAT+TGG | 0.383408 | 3.2:-81655006 | MS.gene013210:CDS |
| GGGTTTCCAACCACTCTCCT+GGG | 0.383983 | 3.2:+81656240 | None:intergenic |
| CTTCATTCTCTCCACCAGCT+TGG | 0.390458 | 3.2:+81654761 | None:intergenic |
| TCTCCATATTCTGTCATGTT+TGG | 0.391928 | 3.2:-81656199 | MS.gene013210:CDS |
| TGACGAACCTGTCATTCTTA+AGG | 0.393509 | 3.2:-81656344 | MS.gene013210:CDS |
| GGTTTGTTATCATCAGGATC+AGG | 0.396865 | 3.2:+81655923 | None:intergenic |
| GCTGAGTCCGAGGGTATTGC+TGG | 0.398364 | 3.2:-81655335 | MS.gene013210:CDS |
| TTCTCAAGTTCAAAGTACTC+TGG | 0.413427 | 3.2:+81655539 | None:intergenic |
| TTCCATATACCCTTATAAGC+TGG | 0.413553 | 3.2:+81655581 | None:intergenic |
| GGCAACAAAACCTGAGGATT+GGG | 0.417078 | 3.2:-81655747 | MS.gene013210:CDS |
| TCCACTTTCCCTTATAAGCT+GGG | 0.417460 | 3.2:+81655624 | None:intergenic |
| AGCTGTAAAGCCAGAGGACT+GGG | 0.421453 | 3.2:-81655861 | MS.gene013210:CDS |
| CTGGCTGTGGTGAGTGGAAG+AGG | 0.424277 | 3.2:-81655661 | MS.gene013210:CDS |
| TCAATACCAATGGCAGCAAT+AGG | 0.424596 | 3.2:+81655503 | None:intergenic |
| TGACGGCGAGGAGAAGAAAA+AGG | 0.425936 | 3.2:-81656002 | MS.gene013210:CDS |
| TGATGAGGAGGATGGTGAAT+GGG | 0.428154 | 3.2:-81655723 | MS.gene013210:CDS |
| ACAAGGTGCACTTCATCTTC+AGG | 0.433871 | 3.2:-81656153 | MS.gene013210:CDS |
| TGTTTGGTCCAGACAGGTGC+GGG | 0.435806 | 3.2:-81656183 | MS.gene013210:CDS |
| TCTTATCTTTCTGGCCACTT+AGG | 0.437920 | 3.2:+81655164 | None:intergenic |
| CTCATTATCAGGCTTTAGAA+TGG | 0.437946 | 3.2:+81656039 | None:intergenic |
| TACCGCATCGTCAGCTTCAT+CGG | 0.439150 | 3.2:+81657543 | None:intergenic |
| TCTGCAGGAAATCATTGAAA+AGG | 0.446463 | 3.2:-81655034 | MS.gene013210:intron |
| ATGATGAGGAGGATGGTGAA+TGG | 0.451613 | 3.2:-81655724 | MS.gene013210:CDS |
| CTGTCATGTTTGGTCCAGAC+AGG | 0.452777 | 3.2:-81656189 | MS.gene013210:CDS |
| CTGCAGGAAATCATTGAAAA+GGG | 0.453156 | 3.2:-81655033 | MS.gene013210:intron |
| TTTGAGCCTATTGCTGCCAT+TGG | 0.460151 | 3.2:-81655509 | MS.gene013210:CDS |
| ATCTTTCTGGCCACTTAGGA+AGG | 0.460977 | 3.2:+81655168 | None:intergenic |
| TCCATATACCCTTATAAGCT+GGG | 0.462245 | 3.2:+81655582 | None:intergenic |
| GAATGAAGACAACAAAGAAA+AGG | 0.463345 | 3.2:-81654746 | MS.gene013210:CDS |
| CTGGGATGAGGATGCACCTA+TGG | 0.465153 | 3.2:-81655843 | MS.gene013210:CDS |
| AGTTTCTGTGCGTTCTGTGT+TGG | 0.466104 | 3.2:+81654786 | None:intergenic |
| TCTCAAGTTCAAAGTACTCT+GGG | 0.467035 | 3.2:+81655540 | None:intergenic |
| AAAAGGAACCCAGCTTATAA+GGG | 0.467436 | 3.2:-81655632 | MS.gene013210:CDS |
| ATAAGCTGGGTTATCAATGT+AGG | 0.471071 | 3.2:+81655595 | None:intergenic |
| TCTGGGTCATCTATTTCCTC+TGG | 0.474079 | 3.2:+81655770 | None:intergenic |
| AAGAGGAAGCAATGAAGAAA+AGG | 0.475362 | 3.2:+81657581 | None:intergenic |
| TCTTCCACTCACCACAGCCA+GGG | 0.476497 | 3.2:+81655663 | None:intergenic |
| GCATCCTCATCCCAGTCCTC+TGG | 0.476556 | 3.2:+81655851 | None:intergenic |
| TCCTCATCATCCCAATCCTC+AGG | 0.477110 | 3.2:+81655737 | None:intergenic |
| GATTCGTTGTCAAATCCCTT+GGG | 0.478126 | 3.2:+81656220 | None:intergenic |
| AGATTCGTTGTCAAATCCCT+TGG | 0.479561 | 3.2:+81656219 | None:intergenic |
| AGGCAACAAAACCTGAGGAT+TGG | 0.480179 | 3.2:-81655748 | MS.gene013210:CDS |
| TCTTTCTCAATGTTAAACTT+GGG | 0.480481 | 3.2:+81655386 | None:intergenic |
| TGGCCTCCTACGTGGAGCAT+TGG | 0.487308 | 3.2:+81654714 | None:intergenic |
| TATATGCACCACCACATTCA+AGG | 0.490647 | 3.2:+81656278 | None:intergenic |
| TGATAATATTCTTATAGCTA+AGG | 0.491075 | 3.2:-81655450 | MS.gene013210:CDS |
| AAGCTGTAAAGCCAGAGGAC+TGG | 0.491241 | 3.2:-81655862 | MS.gene013210:CDS |
| ATTGATAACCCAGCTTATAA+GGG | 0.496616 | 3.2:-81655590 | MS.gene013210:CDS |
| ATGATAACAAACCAGAAGAC+TGG | 0.496997 | 3.2:-81655913 | MS.gene013210:CDS |
| CCGTTGGATTGTATCTGAAA+AGG | 0.499726 | 3.2:-81657409 | MS.gene013210:CDS |
| CGAGGGTATTGCTGGCTACC+AGG | 0.502715 | 3.2:-81655327 | MS.gene013210:intron |
| TATTGAAATTTGGACAATGC+AGG | 0.503304 | 3.2:-81655486 | MS.gene013210:CDS |
| TAAGCTGGGTTATCAATGTA+GGG | 0.504397 | 3.2:+81655596 | None:intergenic |
| TCTTCTGCAGGCTAAGGTGG+AGG | 0.505920 | 3.2:-81654827 | MS.gene013210:intron |
| AATCCTATCGTGAAACTACA+TGG | 0.508933 | 3.2:-81655412 | MS.gene013210:CDS |
| GCTCAAAATCCTCCTCGGAC+AGG | 0.517116 | 3.2:+81655972 | None:intergenic |
| ATAAGGGTATATGGAAGCCT+CGG | 0.523060 | 3.2:-81655574 | MS.gene013210:CDS |
| AGGAGCACCGCGATAGCGAT+AGG | 0.523693 | 3.2:+81657601 | None:intergenic |
| CAGCCCCTGGCTGTGGTGAG+TGG | 0.526056 | 3.2:-81655667 | MS.gene013210:CDS |
| TTTCCATGTAGTTTCACGAT+AGG | 0.527990 | 3.2:+81655409 | None:intergenic |
| AAGCTGAGAAACCTGAAGAA+TGG | 0.528750 | 3.2:-81655805 | MS.gene013210:CDS |
| TTCAACCCCAGGAGAGTGGT+TGG | 0.532251 | 3.2:-81656246 | MS.gene013210:CDS |
| GGAGGCAGCAGCTGAGTCCG+AGG | 0.532327 | 3.2:-81655345 | MS.gene013210:CDS |
| GTTTGTTATCATCAGGATCA+GGG | 0.534077 | 3.2:+81655924 | None:intergenic |
| AGAGAAACAGAAGGCTGAAG+AGG | 0.535396 | 3.2:-81655366 | MS.gene013210:CDS |
| GATCCATCCTTAAGAATGAC+AGG | 0.536585 | 3.2:+81656337 | None:intergenic |
| ATCAGGATCAGGGATTGTCT+TGG | 0.536695 | 3.2:+81655934 | None:intergenic |
| TGTCCAAATTTCAATACCAA+TGG | 0.537978 | 3.2:+81655493 | None:intergenic |
| TAAGGGTATATGGAAGCCTC+GGG | 0.538372 | 3.2:-81655573 | MS.gene013210:CDS |
| ACCCAGCTTATAAGGGAAAG+TGG | 0.538755 | 3.2:-81655625 | MS.gene013210:CDS |
| CATTCTAAAGCCTGATAATG+AGG | 0.539931 | 3.2:-81656038 | MS.gene013210:CDS |
| TCTTCATCAATAATTTCCAT+AGG | 0.540356 | 3.2:+81655827 | None:intergenic |
| ACCTGAGGATTGGGATGATG+AGG | 0.540446 | 3.2:-81655738 | MS.gene013210:CDS |
| CTTCCACTCACCACAGCCAG+GGG | 0.542397 | 3.2:+81655664 | None:intergenic |
| TTTGAGACTCGCCTTCAGAA+TGG | 0.542633 | 3.2:-81656301 | MS.gene013210:CDS |
| GCAGCAATAGGCTCAAAGTC+AGG | 0.545429 | 3.2:+81655515 | None:intergenic |
| CGCACAGAAACTTCCCAAGC+TGG | 0.545555 | 3.2:-81654775 | MS.gene013210:CDS |
| GAAACAGAAGGCTGAAGAGG+AGG | 0.547348 | 3.2:-81655363 | MS.gene013210:CDS |
| AGTTTGTCAGATGGGACAGA+AGG | 0.547484 | 3.2:+81656079 | None:intergenic |
| CATGAGATAGTTTGTCAGAT+GGG | 0.548220 | 3.2:+81656071 | None:intergenic |
| GTTTGTCAGATGGGACAGAA+GGG | 0.550204 | 3.2:+81656080 | None:intergenic |
| CCAAAGTGTGAATCAGCCCC+TGG | 0.551044 | 3.2:-81655680 | MS.gene013210:CDS |
| TTGTCAGATGGGACAGAAGG+GGG | 0.552914 | 3.2:+81656082 | None:intergenic |
| GCAGGCTAAGGTGGAGGCGA+AGG | 0.553851 | 3.2:-81654821 | MS.gene013210:intron |
| AGTGGAAGAGGCCAACGAAA+AGG | 0.554259 | 3.2:-81655649 | MS.gene013210:CDS |
| GGTTTCCAACCACTCTCCTG+GGG | 0.554990 | 3.2:+81656241 | None:intergenic |
| ATTAGCAATGGTGGAACGAA+AGG | 0.558203 | 3.2:-81657629 | None:intergenic |
| CACATTCAAGGCCATTCTGA+AGG | 0.558745 | 3.2:+81656290 | None:intergenic |
| CAGGTGCGGGGCAACAAACA+AGG | 0.564763 | 3.2:-81656170 | MS.gene013210:CDS |
| AAAGCCAGAGGACTGGGATG+AGG | 0.564770 | 3.2:-81655855 | MS.gene013210:CDS |
| GGAGCACCGCGATAGCGATA+GGG | 0.567430 | 3.2:+81657602 | None:intergenic |
| ATGTTTGGTCCAGACAGGTG+CGG | 0.569118 | 3.2:-81656184 | MS.gene013210:CDS |
| GGATCAGGGATTGTCTTGGA+AGG | 0.571851 | 3.2:+81655938 | None:intergenic |
| TCTTTCTGGCCACTTAGGAA+GGG | 0.574034 | 3.2:+81655169 | None:intergenic |
| GATTGGGATGATGAGGAGGA+TGG | 0.574150 | 3.2:-81655731 | MS.gene013210:CDS |
| TGTGAATCAGCCCCTGGCTG+TGG | 0.575974 | 3.2:-81655674 | MS.gene013210:CDS |
| GAGGTGAGAATTCTAGTTGA+CGG | 0.579771 | 3.2:-81656019 | MS.gene013210:CDS |
| CAGCCAATGCTCCACGTAGG+AGG | 0.580449 | 3.2:-81654717 | MS.gene013210:CDS |
| TCTTTAGGCTCATATTCGGC+GGG | 0.582978 | 3.2:-81654945 | MS.gene013210:CDS |
| TTCTTTAGGCTCATATTCGG+CGG | 0.583806 | 3.2:-81654946 | MS.gene013210:CDS |
| TGGAAGCATTCTAAGAGTGA+GGG | 0.585471 | 3.2:-81656430 | MS.gene013210:CDS |
| GGAAGCGTGAACGAAGGAAG+AGG | 0.587228 | 3.2:+81657564 | None:intergenic |
| CTGGAAGCATTCTAAGAGTG+AGG | 0.587589 | 3.2:-81656431 | MS.gene013210:CDS |
| GGAGAGTGGTTGGAAACCCA+AGG | 0.591216 | 3.2:-81656236 | MS.gene013210:CDS |
| TGAGAAACCTGAAGAATGGT+TGG | 0.592154 | 3.2:-81655801 | MS.gene013210:CDS |
| GCAGACATTCCCTTCCTAAG+TGG | 0.593740 | 3.2:-81655178 | MS.gene013210:CDS |
| GAACCTGTCATTCTTAAGGA+TGG | 0.594415 | 3.2:-81656340 | MS.gene013210:CDS |
| AGAAGGCTCAAAATCCTCCT+CGG | 0.597536 | 3.2:+81655967 | None:intergenic |
| TATTAAATATCTTCAACCCC+AGG | 0.601083 | 3.2:-81656257 | MS.gene013210:CDS |
| TCTGGGTTTGGAATCTCCCG+AGG | 0.605370 | 3.2:+81655557 | None:intergenic |
| ACATGAGATAGTTTGTCAGA+TGG | 0.606072 | 3.2:+81656070 | None:intergenic |
| TCTCGCTTTGGCCTCCTACG+TGG | 0.607453 | 3.2:+81654706 | None:intergenic |
| GTCTTGGAAGGGATAAGAGA+AGG | 0.612453 | 3.2:+81655950 | None:intergenic |
| GAGGCAGCAGCTGAGTCCGA+GGG | 0.612757 | 3.2:-81655344 | MS.gene013210:CDS |
| CTTCAGAATGGCCTTGAATG+TGG | 0.614341 | 3.2:-81656289 | MS.gene013210:CDS |
| TATCTTCAACCCCAGGAGAG+TGG | 0.614389 | 3.2:-81656250 | MS.gene013210:CDS |
| TTTGTCAGATGGGACAGAAG+GGG | 0.617670 | 3.2:+81656081 | None:intergenic |
| TGGAATTCTTGCATCCGTTG+TGG | 0.618008 | 3.2:-81654986 | MS.gene013210:CDS |
| TGTCTGCGATCTTGTACAAG+AGG | 0.619339 | 3.2:+81655194 | None:intergenic |
| TTCTTGTTAGTGAACCAGCA+AGG | 0.619414 | 3.2:-81656390 | MS.gene013210:CDS |
| GAGCACCGCGATAGCGATAG+GGG | 0.620301 | 3.2:+81657603 | None:intergenic |
| TGCAGGAAATCATTGAAAAG+GGG | 0.624295 | 3.2:-81655032 | MS.gene013210:intron |
| CAGAATGGCCTTGAATGTGG+TGG | 0.626980 | 3.2:-81656286 | MS.gene013210:CDS |
| GCAGGAAATCATTGAAAAGG+GGG | 0.627203 | 3.2:-81655031 | MS.gene013210:intron |
| GAAGGCGAGTCTCAAACTGA+AGG | 0.630110 | 3.2:+81656308 | None:intergenic |
| TGTCAGATGGGACAGAAGGG+GGG | 0.631248 | 3.2:+81656083 | None:intergenic |
| TTCATCGGAAGCGTGAACGA+AGG | 0.632521 | 3.2:+81657558 | None:intergenic |
| GATCAGGGATTGTCTTGGAA+GGG | 0.635602 | 3.2:+81655939 | None:intergenic |
| TGATAACAAACCAGAAGACT+GGG | 0.636071 | 3.2:-81655912 | MS.gene013210:CDS |
| TTGGATTGTATCTGAAAAGG+AGG | 0.638329 | 3.2:-81657406 | MS.gene013210:CDS |
| CTGGTAGCCAGCAATACCCT+CGG | 0.639757 | 3.2:+81655328 | None:intergenic |
| ATGGTTGGATGACGAGCCAG+AGG | 0.645028 | 3.2:-81655786 | MS.gene013210:CDS |
| GGCTAACTTCCTGTCCGAGG+AGG | 0.645087 | 3.2:-81655981 | MS.gene013210:CDS |
| GAGAATTCTAGTTGACGGCG+AGG | 0.652459 | 3.2:-81656014 | MS.gene013210:CDS |
| CTTCTACGAATCGTTCGATG+AGG | 0.652723 | 3.2:-81657442 | MS.gene013210:CDS |
| AAAGGCTAACTTCCTGTCCG+AGG | 0.652948 | 3.2:-81655984 | MS.gene013210:CDS |
| AGCTGGGTTATCAATGTAGG+GGG | 0.658344 | 3.2:+81655598 | None:intergenic |
| GGAAGCATTCTAAGAGTGAG+GGG | 0.661084 | 3.2:-81656429 | MS.gene013210:CDS |
| AAGCTGGGTTATCAATGTAG+GGG | 0.662575 | 3.2:+81655597 | None:intergenic |
| TGAGGATTGGGATGATGAGG+AGG | 0.663099 | 3.2:-81655735 | MS.gene013210:CDS |
| CATTGAGAAAGAGAAACAGA+AGG | 0.664396 | 3.2:-81655375 | MS.gene013210:CDS |
| GAAATTTGGACAATGCAGGA+CGG | 0.665071 | 3.2:-81655482 | MS.gene013210:CDS |
| ACAGAAACTTCCCAAGCTGG+TGG | 0.666572 | 3.2:-81654772 | MS.gene013210:CDS |
| GAGAGTGGTTGGAAACCCAA+GGG | 0.671705 | 3.2:-81656235 | MS.gene013210:CDS |
| TCTGAAAAGGAGGAATACAA+TGG | 0.671724 | 3.2:-81657396 | MS.gene013210:intron |
| CCCAGAAGCTGTAAAGCCAG+AGG | 0.676697 | 3.2:-81655867 | MS.gene013210:CDS |
| TTCCGATGAAGCTGACGATG+CGG | 0.679909 | 3.2:-81657545 | MS.gene013210:intron |
| CCCAGAGGCAACAAAACCTG+AGG | 0.683397 | 3.2:-81655753 | MS.gene013210:CDS |
| GGTTACCCCTATCGCTATCG+CGG | 0.684117 | 3.2:-81657608 | MS.gene013210:CDS |
| GTTTGGTCCAGACAGGTGCG+GGG | 0.694516 | 3.2:-81656182 | MS.gene013210:CDS |
| AGAGGAAATAGATGACCCAG+AGG | 0.718864 | 3.2:-81655768 | MS.gene013210:CDS |
| AAACAGCCAATGCTCCACGT+AGG | 0.734567 | 3.2:-81654720 | MS.gene013210:CDS |
| TGTCACGAAAACAACCACAA+CGG | 0.747223 | 3.2:+81654972 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATAATGAATAATG+AGG | + | chr3.2:81654815-81654834 | None:intergenic | 10.0% |
| !!! | ATTATTAATTAATTGTGTTT+TGG | - | chr3.2:81655015-81655034 | MS.gene013210:CDS | 10.0% |
| !! | ATTTCAAAAAATATTCCTAT+TGG | + | chr3.2:81655469-81655488 | None:intergenic | 15.0% |
| !!! | AAATATAAGAATGATTTTTG+TGG | - | chr3.2:81655485-81655504 | MS.gene013210:CDS | 15.0% |
| !!! | GATAACTTTTTAAAAGAAAT+CGG | - | chr3.2:81655061-81655080 | MS.gene013210:intron | 15.0% |
| !!! | TACATTTTGATTTTTGTTTT+GGG | - | chr3.2:81655857-81655876 | MS.gene013210:CDS | 15.0% |
| !!! | TTATTTTTTTTTGTTTGTGA+TGG | - | chr3.2:81654824-81654843 | MS.gene013210:intron | 15.0% |
| !! | AAATGTACATCAAAATTTGT+TGG | + | chr3.2:81655844-81655863 | None:intergenic | 20.0% |
| !! | AATAAAATTTCACAACTTAC+AGG | + | chr3.2:81657408-81657427 | None:intergenic | 20.0% |
| !! | ATAAAATACTATATAGCCTT+AGG | + | chr3.2:81655622-81655641 | None:intergenic | 20.0% |
| !! | ATGAAATTAAATAGAACCTA+AGG | - | chr3.2:81655603-81655622 | MS.gene013210:CDS | 20.0% |
| !! | TAACAGAAATAAAATGAAAG+TGG | + | chr3.2:81655649-81655668 | None:intergenic | 20.0% |
| !! | TGATAATATTCTTATAGCTA+AGG | - | chr3.2:81656871-81656890 | MS.gene013210:intron | 20.0% |
| !! | TTACAATAATCTTATCTTTC+TGG | + | chr3.2:81657169-81657188 | None:intergenic | 20.0% |
| !!! | AATTTTAAAAGGAAATCAAG+TGG | + | chr3.2:81655425-81655444 | None:intergenic | 20.0% |
| !!! | GATTTCCTTTTAAAATTACA+GGG | - | chr3.2:81655428-81655447 | MS.gene013210:CDS | 20.0% |
| !!! | GTACATTTTGATTTTTGTTT+TGG | - | chr3.2:81655856-81655875 | MS.gene013210:CDS | 20.0% |
| !!! | TGATTTCCTTTTAAAATTAC+AGG | - | chr3.2:81655427-81655446 | MS.gene013210:CDS | 20.0% |
| !!! | TTATTTCTGTTATTCATTCT+GGG | - | chr3.2:81655657-81655676 | MS.gene013210:CDS | 20.0% |
| !!! | TTTATTTCTGTTATTCATTC+TGG | - | chr3.2:81655656-81655675 | MS.gene013210:CDS | 20.0% |
| ! | AATGGTAAGTAAATTCGAAT+CGG | - | chr3.2:81654943-81654962 | MS.gene013210:CDS | 25.0% |
| ! | ACGGAATAATAATGAAAGTA+AGG | - | chr3.2:81655542-81655561 | MS.gene013210:CDS | 25.0% |
| ! | AGAAATAAAATGAAAGTGGT+TGG | + | chr3.2:81655645-81655664 | None:intergenic | 25.0% |
| ! | ATACATGTGTATAATATTGC+AGG | - | chr3.2:81655386-81655405 | MS.gene013210:CDS | 25.0% |
| ! | CTCGTTCATATTAATTTCAT+GGG | - | chr3.2:81657431-81657450 | MS.gene013210:CDS | 25.0% |
| ! | GATTTAAGTAAAACCTAATC+TGG | - | chr3.2:81655156-81655175 | MS.gene013210:intron | 25.0% |
| ! | TCGTTCATATTAATTTCATG+GGG | - | chr3.2:81657432-81657451 | MS.gene013210:CDS | 25.0% |
| ! | TCTTCATCAATAATTTCCAT+AGG | + | chr3.2:81656497-81656516 | None:intergenic | 25.0% |
| ! | TCTTTCTCAATGTTAAACTT+GGG | + | chr3.2:81656938-81656957 | None:intergenic | 25.0% |
| !! | ATTTTCTTTAGGCTCATATT+CGG | - | chr3.2:81657372-81657391 | MS.gene013210:intron | 25.0% |
| !! | GCAAGTTCAATAAATTTTGA+AGG | - | chr3.2:81655742-81655761 | MS.gene013210:CDS | 25.0% |
| !! | GTATTTTTCATTCACATTCA+TGG | - | chr3.2:81657455-81657474 | MS.gene013210:intron | 25.0% |
| !! | TATTTCTGTTATTCATTCTG+GGG | - | chr3.2:81655658-81655677 | MS.gene013210:CDS | 25.0% |
| !! | TTTAAATTTTCCTCCTCTTT+TGG | - | chr3.2:81657212-81657231 | MS.gene013210:intron | 25.0% |
| !! | TTTTCGTGACAATTTTCTTT+AGG | - | chr3.2:81657361-81657380 | MS.gene013210:intron | 25.0% |
| !!! | TCCTATTGGTTTTTATAGTT+GGG | + | chr3.2:81655455-81655474 | None:intergenic | 25.0% |
| !!! | TTCCTATTGGTTTTTATAGT+TGG | + | chr3.2:81655456-81655475 | None:intergenic | 25.0% |
| !!! | TTTTTTTACCTTACAGAAGA+AGG | - | chr3.2:81657097-81657116 | MS.gene013210:intron | 25.0% |
| AAACAAACTAACTGCTATTC+TGG | - | chr3.2:81655254-81655273 | MS.gene013210:intron | 30.0% | |
| AAGAGAGAAGATAGAGTAAA+TGG | + | chr3.2:81657034-81657053 | None:intergenic | 30.0% | |
| ACCCAACTATAAAAACCAAT+AGG | - | chr3.2:81655451-81655470 | MS.gene013210:CDS | 30.0% | |
| AGAATTCCAATAGTCAGATT+TGG | + | chr3.2:81657324-81657343 | None:intergenic | 30.0% | |
| ATAATATTGCAGGCTAGATT+TGG | - | chr3.2:81655396-81655415 | MS.gene013210:CDS | 30.0% | |
| ATCCAGTAAGTGAATCATAA+TGG | + | chr3.2:81657241-81657260 | None:intergenic | 30.0% | |
| ATCCATTATGATTCACTTAC+TGG | - | chr3.2:81657236-81657255 | MS.gene013210:intron | 30.0% | |
| ATGCATAAGAAAGAAAAGGA+AGG | + | chr3.2:81657068-81657087 | None:intergenic | 30.0% | |
| ATTATGATTCACTTACTGGA+TGG | - | chr3.2:81657240-81657259 | MS.gene013210:intron | 30.0% | |
| CATCATGCATAAGAAAGAAA+AGG | + | chr3.2:81657072-81657091 | None:intergenic | 30.0% | |
| CGTTCATATTAATTTCATGG+GGG | - | chr3.2:81657433-81657452 | MS.gene013210:CDS | 30.0% | |
| CTCTTTCTCAATGTTAAACT+TGG | + | chr3.2:81656939-81656958 | None:intergenic | 30.0% | |
| GAATGAAGACAACAAAGAAA+AGG | - | chr3.2:81657575-81657594 | MS.gene013210:CDS | 30.0% | |
| GCTCGTTCATATTAATTTCA+TGG | - | chr3.2:81657430-81657449 | MS.gene013210:CDS | 30.0% | |
| GTGAATCAATAATCCAGATT+AGG | + | chr3.2:81655172-81655191 | None:intergenic | 30.0% | |
| TATTAAATATCTTCAACCCC+AGG | - | chr3.2:81656064-81656083 | MS.gene013210:CDS | 30.0% | |
| TATTGAAATTTGGACAATGC+AGG | - | chr3.2:81656835-81656854 | MS.gene013210:intron | 30.0% | |
| TGTCCAAATTTCAATACCAA+TGG | + | chr3.2:81656831-81656850 | None:intergenic | 30.0% | |
| TTCGTCAAGTTCTTTAACTA+TGG | + | chr3.2:81655964-81655983 | None:intergenic | 30.0% | |
| ! | AAAGTAAGGATGAAAGCATA+GGG | - | chr3.2:81655556-81655575 | MS.gene013210:CDS | 30.0% |
| ! | ATTGATAACCCAGCTTATAA+GGG | - | chr3.2:81656731-81656750 | MS.gene013210:intron | 30.0% |
| ! | ATTTTTGTGGCAATGTTGAA+GGG | - | chr3.2:81655498-81655517 | MS.gene013210:CDS | 30.0% |
| !! | ACACTTTGGGTTTTCAATTT+TGG | + | chr3.2:81656630-81656649 | None:intergenic | 30.0% |
| !! | ATCATAATGGATACCAAAAG+AGG | + | chr3.2:81657228-81657247 | None:intergenic | 30.0% |
| !! | CACTTTGGGTTTTCAATTTT+GGG | + | chr3.2:81656629-81656648 | None:intergenic | 30.0% |
| !!! | TGATTTTTGTTTTGGGTATC+AGG | - | chr3.2:81655864-81655883 | MS.gene013210:CDS | 30.0% |
| AAAAGGAACCCAGCTTATAA+GGG | - | chr3.2:81656689-81656708 | MS.gene013210:intron | 35.0% | |
| AAGAGGAAGCAATGAAGAAA+AGG | + | chr3.2:81654743-81654762 | None:intergenic | 35.0% | |
| AAGCAACCAAATCTGACTAT+TGG | - | chr3.2:81657315-81657334 | MS.gene013210:intron | 35.0% | |
| AATCCTATCGTGAAACTACA+TGG | - | chr3.2:81656909-81656928 | MS.gene013210:intron | 35.0% | |
| AATTAATGCGAAACAGATCC+GGG | + | chr3.2:81655799-81655818 | None:intergenic | 35.0% | |
| AGAATTCTCACCTCATTATC+AGG | + | chr3.2:81656296-81656315 | None:intergenic | 35.0% | |
| AGGCATAAAAATCCAAAGAC+TGG | - | chr3.2:81656188-81656207 | MS.gene013210:CDS | 35.0% | |
| ATAAGCTGGGTTATCAATGT+AGG | + | chr3.2:81656729-81656748 | None:intergenic | 35.0% | |
| ATGATAACAAACCAGAAGAC+TGG | - | chr3.2:81656408-81656427 | MS.gene013210:CDS | 35.0% | |
| CAATTAATGCGAAACAGATC+CGG | + | chr3.2:81655800-81655819 | None:intergenic | 35.0% | |
| CATTGAGAAAGAGAAACAGA+AGG | - | chr3.2:81656946-81656965 | MS.gene013210:intron | 35.0% | |
| CTGCAGGAAATCATTGAAAA+GGG | - | chr3.2:81657288-81657307 | MS.gene013210:intron | 35.0% | |
| GAGAAGATAGAGTAAATGGA+AGG | + | chr3.2:81657030-81657049 | None:intergenic | 35.0% | |
| TAAGCTGGGTTATCAATGTA+GGG | + | chr3.2:81656728-81656747 | None:intergenic | 35.0% | |
| TATACTTTATGCTTCTCTGC+AGG | - | chr3.2:81657272-81657291 | MS.gene013210:intron | 35.0% | |
| TCAACATACTTTCCAGTCTT+TGG | + | chr3.2:81656203-81656222 | None:intergenic | 35.0% | |
| TCCATATACCCTTATAAGCT+GGG | + | chr3.2:81656742-81656761 | None:intergenic | 35.0% | |
| TCTCCATATTCTGTCATGTT+TGG | - | chr3.2:81656122-81656141 | MS.gene013210:CDS | 35.0% | |
| TCTGAAAAGGAGGAATACAA+TGG | - | chr3.2:81654925-81654944 | MS.gene013210:intron | 35.0% | |
| TCTGCAGGAAATCATTGAAA+AGG | - | chr3.2:81657287-81657306 | MS.gene013210:intron | 35.0% | |
| TGATAACAAACCAGAAGACT+GGG | - | chr3.2:81656409-81656428 | MS.gene013210:CDS | 35.0% | |
| TGCAGGAAATCATTGAAAAG+GGG | - | chr3.2:81657289-81657308 | MS.gene013210:intron | 35.0% | |
| TTCCATATACCCTTATAAGC+TGG | + | chr3.2:81656743-81656762 | None:intergenic | 35.0% | |
| TTGGATTGTATCTGAAAAGG+AGG | - | chr3.2:81654915-81654934 | MS.gene013210:intron | 35.0% | |
| TTTCCATGTAGTTTCACGAT+AGG | + | chr3.2:81656915-81656934 | None:intergenic | 35.0% | |
| ! | ACATGAGATAGTTTGTCAGA+TGG | + | chr3.2:81656254-81656273 | None:intergenic | 35.0% |
| ! | CATGAGATAGTTTGTCAGAT+GGG | + | chr3.2:81656253-81656272 | None:intergenic | 35.0% |
| ! | CATTGATAACCCAGCTTATA+AGG | - | chr3.2:81656730-81656749 | MS.gene013210:intron | 35.0% |
| ! | CCTTTTCAGATACAATCCAA+CGG | + | chr3.2:81654915-81654934 | None:intergenic | 35.0% |
| ! | CTGCCATTGGTATTGAAATT+TGG | - | chr3.2:81656825-81656844 | MS.gene013210:intron | 35.0% |
| ! | GAAAGTAAGGATGAAAGCAT+AGG | - | chr3.2:81655555-81655574 | MS.gene013210:CDS | 35.0% |
| ! | GATTTTTGTGGCAATGTTGA+AGG | - | chr3.2:81655497-81655516 | MS.gene013210:CDS | 35.0% |
| ! | TCTCAAGTTCAAAGTACTCT+GGG | + | chr3.2:81656784-81656803 | None:intergenic | 35.0% |
| ! | TGGGTCCCTGTAATTTTAAA+AGG | + | chr3.2:81655436-81655455 | None:intergenic | 35.0% |
| ! | TTCTCAAGTTCAAAGTACTC+TGG | + | chr3.2:81656785-81656804 | None:intergenic | 35.0% |
| !! | ATAATGGATACCAAAAGAGG+AGG | + | chr3.2:81657225-81657244 | None:intergenic | 35.0% |
| !! | CATTCTAAAGCCTGATAATG+AGG | - | chr3.2:81656283-81656302 | MS.gene013210:CDS | 35.0% |
| !! | CTCATTATCAGGCTTTAGAA+TGG | + | chr3.2:81656285-81656304 | None:intergenic | 35.0% |
| !! | GTTTGTTATCATCAGGATCA+GGG | + | chr3.2:81656400-81656419 | None:intergenic | 35.0% |
| !! | TCTTCTGGTTTGTTATCATC+AGG | + | chr3.2:81656407-81656426 | None:intergenic | 35.0% |
| AAGCTGAGAAACCTGAAGAA+TGG | - | chr3.2:81656516-81656535 | MS.gene013210:intron | 40.0% | |
| AAGCTGGGTTATCAATGTAG+GGG | + | chr3.2:81656727-81656746 | None:intergenic | 40.0% | |
| AGATTCGTTGTCAAATCCCT+TGG | + | chr3.2:81656105-81656124 | None:intergenic | 40.0% | |
| ATGTTGAAGGGTTGTTGTGT+TGG | - | chr3.2:81655510-81655529 | MS.gene013210:CDS | 40.0% | |
| CATATCACACTATGCAAACC+CGG | - | chr3.2:81655778-81655797 | MS.gene013210:CDS | 40.0% | |
| CCGTTGGATTGTATCTGAAA+AGG | - | chr3.2:81654912-81654931 | MS.gene013210:intron | 40.0% | |
| GAAAAGGAACCCAGCTTATA+AGG | - | chr3.2:81656688-81656707 | MS.gene013210:intron | 40.0% | |
| GAAATTTGGACAATGCAGGA+CGG | - | chr3.2:81656839-81656858 | MS.gene013210:intron | 40.0% | |
| GAACCTGTCATTCTTAAGGA+TGG | - | chr3.2:81655981-81656000 | MS.gene013210:CDS | 40.0% | |
| GATCCATCCTTAAGAATGAC+AGG | + | chr3.2:81655987-81656006 | None:intergenic | 40.0% | |
| GATTCGTTGTCAAATCCCTT+GGG | + | chr3.2:81656104-81656123 | None:intergenic | 40.0% | |
| GCAGGAAATCATTGAAAAGG+GGG | - | chr3.2:81657290-81657309 | MS.gene013210:intron | 40.0% | |
| GGACCAAACATGACAGAATA+TGG | + | chr3.2:81656128-81656147 | None:intergenic | 40.0% | |
| GTCAAATGCCTTCTTCTGTA+AGG | + | chr3.2:81657108-81657127 | None:intergenic | 40.0% | |
| TATATGCACCACCACATTCA+AGG | + | chr3.2:81656046-81656065 | None:intergenic | 40.0% | |
| TCAATACCAATGGCAGCAAT+AGG | + | chr3.2:81656821-81656840 | None:intergenic | 40.0% | |
| TCCACTTTCCCTTATAAGCT+GGG | + | chr3.2:81656700-81656719 | None:intergenic | 40.0% | |
| TGACGAACCTGTCATTCTTA+AGG | - | chr3.2:81655977-81655996 | MS.gene013210:CDS | 40.0% | |
| TGAGAAACCTGAAGAATGGT+TGG | - | chr3.2:81656520-81656539 | MS.gene013210:intron | 40.0% | |
| TGTCACGAAAACAACCACAA+CGG | + | chr3.2:81657352-81657371 | None:intergenic | 40.0% | |
| TTCTTGTTAGTGAACCAGCA+AGG | - | chr3.2:81655931-81655950 | MS.gene013210:CDS | 40.0% | |
| TTCTTTAGGCTCATATTCGG+CGG | - | chr3.2:81657375-81657394 | MS.gene013210:intron | 40.0% | |
| TTGCATAGTGTGATATGCGT+TGG | + | chr3.2:81655775-81655794 | None:intergenic | 40.0% | |
| ! | AACCAAGTCTTTTCTTCTGC+AGG | - | chr3.2:81657482-81657501 | MS.gene013210:intron | 40.0% |
| ! | AATCGGTTTCTGCTACTACA+TGG | - | chr3.2:81655078-81655097 | MS.gene013210:intron | 40.0% |
| ! | ACCCAGCTTATAAGGGTATA+TGG | - | chr3.2:81656738-81656757 | MS.gene013210:intron | 40.0% |
| ! | AGTTCAAAGTACTCTGGGTT+TGG | + | chr3.2:81656779-81656798 | None:intergenic | 40.0% |
| ! | ATAAGGGTATATGGAAGCCT+CGG | - | chr3.2:81656747-81656766 | MS.gene013210:intron | 40.0% |
| ! | ATGGAAGGATTTTCGTTACC+TGG | + | chr3.2:81657015-81657034 | None:intergenic | 40.0% |
| ! | GAGGTGAGAATTCTAGTTGA+CGG | - | chr3.2:81656302-81656321 | MS.gene013210:CDS | 40.0% |
| ! | GTTGTGTTGGCAATATGCTA+CGG | - | chr3.2:81655523-81655542 | MS.gene013210:CDS | 40.0% |
| ! | TCTTATCTTTCTGGCCACTT+AGG | + | chr3.2:81657160-81657179 | None:intergenic | 40.0% |
| !! | ATGAGGATTTTGATAGCCGT+TGG | - | chr3.2:81654896-81654915 | MS.gene013210:intron | 40.0% |
| !! | GGTTTGTTATCATCAGGATC+AGG | + | chr3.2:81656401-81656420 | None:intergenic | 40.0% |
| !! | TGGAAGCATTCTAAGAGTGA+GGG | - | chr3.2:81655891-81655910 | MS.gene013210:CDS | 40.0% |
| ACAAGGTGCACTTCATCTTC+AGG | - | chr3.2:81656168-81656187 | MS.gene013210:CDS | 45.0% | |
| ACCCAGCTTATAAGGGAAAG+TGG | - | chr3.2:81656696-81656715 | MS.gene013210:intron | 45.0% | |
| AGAAGGCTCAAAATCCTCCT+CGG | + | chr3.2:81656357-81656376 | None:intergenic | 45.0% | |
| AGAGAAACAGAAGGCTGAAG+AGG | - | chr3.2:81656955-81656974 | MS.gene013210:intron | 45.0% | |
| AGAGGAAATAGATGACCCAG+AGG | - | chr3.2:81656553-81656572 | MS.gene013210:intron | 45.0% | |
| AGCCTGCAGAAGAAAAGACT+TGG | + | chr3.2:81657487-81657506 | None:intergenic | 45.0% | |
| AGCTGGGTTATCAATGTAGG+GGG | + | chr3.2:81656726-81656745 | None:intergenic | 45.0% | |
| AGGCAACAAAACCTGAGGAT+TGG | - | chr3.2:81656573-81656592 | MS.gene013210:intron | 45.0% | |
| AGTTTCTGTGCGTTCTGTGT+TGG | + | chr3.2:81657538-81657557 | None:intergenic | 45.0% | |
| AGTTTGTCAGATGGGACAGA+AGG | + | chr3.2:81656245-81656264 | None:intergenic | 45.0% | |
| ATCAGGATCAGGGATTGTCT+TGG | + | chr3.2:81656390-81656409 | None:intergenic | 45.0% | |
| ATGATGAGGAGGATGGTGAA+TGG | - | chr3.2:81656597-81656616 | MS.gene013210:intron | 45.0% | |
| CACATTCAAGGCCATTCTGA+AGG | + | chr3.2:81656034-81656053 | None:intergenic | 45.0% | |
| CTCCACTTTCCCTTATAAGC+TGG | + | chr3.2:81656701-81656720 | None:intergenic | 45.0% | |
| CTTCTACGAATCGTTCGATG+AGG | - | chr3.2:81654879-81654898 | MS.gene013210:intron | 45.0% | |
| GATCAGGGATTGTCTTGGAA+GGG | + | chr3.2:81656385-81656404 | None:intergenic | 45.0% | |
| GGCAACAAAACCTGAGGATT+GGG | - | chr3.2:81656574-81656593 | MS.gene013210:intron | 45.0% | |
| GTCTTGGAAGGGATAAGAGA+AGG | + | chr3.2:81656374-81656393 | None:intergenic | 45.0% | |
| GTTTGTCAGATGGGACAGAA+GGG | + | chr3.2:81656244-81656263 | None:intergenic | 45.0% | |
| TCGTCATCCAACCATTCTTC+AGG | + | chr3.2:81656530-81656549 | None:intergenic | 45.0% | |
| TCTGGGTCATCTATTTCCTC+TGG | + | chr3.2:81656554-81656573 | None:intergenic | 45.0% | |
| TCTTTAGGCTCATATTCGGC+GGG | - | chr3.2:81657376-81657395 | MS.gene013210:intron | 45.0% | |
| TGATGAGGAGGATGGTGAAT+GGG | - | chr3.2:81656598-81656617 | MS.gene013210:intron | 45.0% | |
| TGGAATTCTTGCATCCGTTG+TGG | - | chr3.2:81657335-81657354 | MS.gene013210:intron | 45.0% | |
| TGTCTGCGATCTTGTACAAG+AGG | + | chr3.2:81657130-81657149 | None:intergenic | 45.0% | |
| TTCATTCTCTCCACCAGCTT+GGG | + | chr3.2:81657562-81657581 | None:intergenic | 45.0% | |
| TTTGAGCCTATTGCTGCCAT+TGG | - | chr3.2:81656812-81656831 | MS.gene013210:intron | 45.0% | |
| TTTGTCAGATGGGACAGAAG+GGG | + | chr3.2:81656243-81656262 | None:intergenic | 45.0% | |
| ! | ATCTTTCTGGCCACTTAGGA+AGG | + | chr3.2:81657156-81657175 | None:intergenic | 45.0% |
| ! | CTTCAGAATGGCCTTGAATG+TGG | - | chr3.2:81656032-81656051 | MS.gene013210:CDS | 45.0% |
| ! | GTCTTTTCTTCTGCAGGCTA+AGG | - | chr3.2:81657488-81657507 | MS.gene013210:intron | 45.0% |
| ! | TAAGCTGGGTTCCTTTTCGT+TGG | + | chr3.2:81656686-81656705 | None:intergenic | 45.0% |
| ! | TAAGGGTATATGGAAGCCTC+GGG | - | chr3.2:81656748-81656767 | MS.gene013210:intron | 45.0% |
| ! | TCTTTCTGGCCACTTAGGAA+GGG | + | chr3.2:81657155-81657174 | None:intergenic | 45.0% |
| ! | TTTGAGACTCGCCTTCAGAA+TGG | - | chr3.2:81656020-81656039 | MS.gene013210:CDS | 45.0% |
| ! | TTTTCTTCTGCAGGCTAAGG+TGG | - | chr3.2:81657491-81657510 | MS.gene013210:intron | 45.0% |
| !! | CTGGAAGCATTCTAAGAGTG+AGG | - | chr3.2:81655890-81655909 | MS.gene013210:CDS | 45.0% |
| !! | GGAAGCATTCTAAGAGTGAG+GGG | - | chr3.2:81655892-81655911 | MS.gene013210:CDS | 45.0% |
| !! | TGTTTTGGGTATCAGGTGTC+TGG | - | chr3.2:81655871-81655890 | MS.gene013210:CDS | 45.0% |
| AAACAGCCAATGCTCCACGT+AGG | - | chr3.2:81657601-81657620 | MS.gene013210:CDS | 50.0% | |
| AAAGGCTAACTTCCTGTCCG+AGG | - | chr3.2:81656337-81656356 | MS.gene013210:CDS | 50.0% | |
| AAGCTGTAAAGCCAGAGGAC+TGG | - | chr3.2:81656459-81656478 | MS.gene013210:intron | 50.0% | |
| ACAGAAACTTCCCAAGCTGG+TGG | - | chr3.2:81657549-81657568 | MS.gene013210:CDS | 50.0% | |
| ACCTGAGGATTGGGATGATG+AGG | - | chr3.2:81656583-81656602 | MS.gene013210:intron | 50.0% | |
| ACTATGGCGTACTTCCTTGC+TGG | + | chr3.2:81655948-81655967 | None:intergenic | 50.0% | |
| AGCTGTAAAGCCAGAGGACT+GGG | - | chr3.2:81656460-81656479 | MS.gene013210:intron | 50.0% | |
| AGCTTCTGGGTCAGGAATCT+TGG | + | chr3.2:81656444-81656463 | None:intergenic | 50.0% | |
| AGTGGAAGAGGCCAACGAAA+AGG | - | chr3.2:81656672-81656691 | MS.gene013210:intron | 50.0% | |
| ATGTTTGGTCCAGACAGGTG+CGG | - | chr3.2:81656137-81656156 | MS.gene013210:CDS | 50.0% | |
| CTGTCATGTTTGGTCCAGAC+AGG | - | chr3.2:81656132-81656151 | MS.gene013210:CDS | 50.0% | |
| CTTCATTCTCTCCACCAGCT+TGG | + | chr3.2:81657563-81657582 | None:intergenic | 50.0% | |
| GAAACAGAAGGCTGAAGAGG+AGG | - | chr3.2:81656958-81656977 | MS.gene013210:intron | 50.0% | |
| GAAGGCGAGTCTCAAACTGA+AGG | + | chr3.2:81656016-81656035 | None:intergenic | 50.0% | |
| GAGAGTGGTTGGAAACCCAA+GGG | - | chr3.2:81656086-81656105 | MS.gene013210:CDS | 50.0% | |
| GATTGGGATGATGAGGAGGA+TGG | - | chr3.2:81656590-81656609 | MS.gene013210:intron | 50.0% | |
| GCAGACATTCCCTTCCTAAG+TGG | - | chr3.2:81657143-81657162 | MS.gene013210:intron | 50.0% | |
| GCAGCAATAGGCTCAAAGTC+AGG | + | chr3.2:81656809-81656828 | None:intergenic | 50.0% | |
| GGATCAGGGATTGTCTTGGA+AGG | + | chr3.2:81656386-81656405 | None:intergenic | 50.0% | |
| TACCGCATCGTCAGCTTCAT+CGG | + | chr3.2:81654781-81654800 | None:intergenic | 50.0% | |
| TATCTTCAACCCCAGGAGAG+TGG | - | chr3.2:81656071-81656090 | MS.gene013210:CDS | 50.0% | |
| TCCTCATCATCCCAATCCTC+AGG | + | chr3.2:81656587-81656606 | None:intergenic | 50.0% | |
| TGACGGCGAGGAGAAGAAAA+AGG | - | chr3.2:81656319-81656338 | MS.gene013210:CDS | 50.0% | |
| TGAGGATTGGGATGATGAGG+AGG | - | chr3.2:81656586-81656605 | MS.gene013210:intron | 50.0% | |
| TTCCGATGAAGCTGACGATG+CGG | - | chr3.2:81654776-81654795 | MS.gene013210:CDS | 50.0% | |
| TTGTCAGATGGGACAGAAGG+GGG | + | chr3.2:81656242-81656261 | None:intergenic | 50.0% | |
| ! | CAGAATGGCCTTGAATGTGG+TGG | - | chr3.2:81656035-81656054 | MS.gene013210:CDS | 50.0% |
| ! | CAGGGGCTGATTCACACTTT+GGG | + | chr3.2:81656643-81656662 | None:intergenic | 50.0% |
| ! | GAGAATTCTAGTTGACGGCG+AGG | - | chr3.2:81656307-81656326 | MS.gene013210:CDS | 50.0% |
| ! | TTCATCGGAAGCGTGAACGA+AGG | + | chr3.2:81654766-81654785 | None:intergenic | 50.0% |
| !! | AGTGAGGGGCACGATGATTT+TGG | - | chr3.2:81655906-81655925 | MS.gene013210:CDS | 50.0% |
| !! | CCTCTGGCTTTACAGCTTCT+GGG | + | chr3.2:81656457-81656476 | None:intergenic | 50.0% |
| !! | TCCTCTGGCTTTACAGCTTC+TGG | + | chr3.2:81656458-81656477 | None:intergenic | 50.0% |
| !!! | CCTCAGGTTTTGTTGCCTCT+GGG | + | chr3.2:81656571-81656590 | None:intergenic | 50.0% |
| !!! | TCCTCAGGTTTTGTTGCCTC+TGG | + | chr3.2:81656572-81656591 | None:intergenic | 50.0% |
| AAAGCCAGAGGACTGGGATG+AGG | - | chr3.2:81656466-81656485 | MS.gene013210:intron | 55.0% | |
| ATGGTTGGATGACGAGCCAG+AGG | - | chr3.2:81656535-81656554 | MS.gene013210:intron | 55.0% | |
| CAGAAGGGGGGAACTTGAGA+TGG | + | chr3.2:81656229-81656248 | None:intergenic | 55.0% | |
| CCAAAGTGTGAATCAGCCCC+TGG | - | chr3.2:81656641-81656660 | MS.gene013210:intron | 55.0% | |
| CCCAGAAGCTGTAAAGCCAG+AGG | - | chr3.2:81656454-81656473 | MS.gene013210:intron | 55.0% | |
| CCCAGAGGCAACAAAACCTG+AGG | - | chr3.2:81656568-81656587 | MS.gene013210:intron | 55.0% | |
| CGCACAGAAACTTCCCAAGC+TGG | - | chr3.2:81657546-81657565 | MS.gene013210:CDS | 55.0% | |
| CTGGGATGAGGATGCACCTA+TGG | - | chr3.2:81656478-81656497 | MS.gene013210:intron | 55.0% | |
| CTGGTAGCCAGCAATACCCT+CGG | + | chr3.2:81656996-81657015 | None:intergenic | 55.0% | |
| GCTCAAAATCCTCCTCGGAC+AGG | + | chr3.2:81656352-81656371 | None:intergenic | 55.0% | |
| GGAGAGTGGTTGGAAACCCA+AGG | - | chr3.2:81656085-81656104 | MS.gene013210:CDS | 55.0% | |
| GGCTTTACAGCTTCTGGGTC+AGG | + | chr3.2:81656452-81656471 | None:intergenic | 55.0% | |
| GGGTTTCCAACCACTCTCCT+GGG | + | chr3.2:81656084-81656103 | None:intergenic | 55.0% | |
| GGTTACCCCTATCGCTATCG+CGG | - | chr3.2:81654713-81654732 | MS.gene013210:CDS | 55.0% | |
| GGTTTCCAACCACTCTCCTG+GGG | + | chr3.2:81656083-81656102 | None:intergenic | 55.0% | |
| TCTTCCACTCACCACAGCCA+GGG | + | chr3.2:81656661-81656680 | None:intergenic | 55.0% | |
| TCTTCTGCAGGCTAAGGTGG+AGG | - | chr3.2:81657494-81657513 | MS.gene013210:intron | 55.0% | |
| TGGGTTTCCAACCACTCTCC+TGG | + | chr3.2:81656085-81656104 | None:intergenic | 55.0% | |
| TGTCAGATGGGACAGAAGGG+GGG | + | chr3.2:81656241-81656260 | None:intergenic | 55.0% | |
| TGTTTGGTCCAGACAGGTGC+GGG | - | chr3.2:81656138-81656157 | MS.gene013210:CDS | 55.0% | |
| TTCAACCCCAGGAGAGTGGT+TGG | - | chr3.2:81656075-81656094 | MS.gene013210:CDS | 55.0% | |
| ! | CCAGGGGCTGATTCACACTT+TGG | + | chr3.2:81656644-81656663 | None:intergenic | 55.0% |
| ! | GGAAGCGTGAACGAAGGAAG+AGG | + | chr3.2:81654760-81654779 | None:intergenic | 55.0% |
| ! | TCTGGGTTTGGAATCTCCCG+AGG | + | chr3.2:81656767-81656786 | None:intergenic | 55.0% |
| CAGCCAATGCTCCACGTAGG+AGG | - | chr3.2:81657604-81657623 | MS.gene013210:CDS | 60.0% | |
| CAGGTGCGGGGCAACAAACA+AGG | - | chr3.2:81656151-81656170 | MS.gene013210:CDS | 60.0% | |
| CTCTTCCACTCACCACAGCC+AGG | + | chr3.2:81656662-81656681 | None:intergenic | 60.0% | |
| CTGGCTGTGGTGAGTGGAAG+AGG | - | chr3.2:81656660-81656679 | MS.gene013210:intron | 60.0% | |
| CTTCCACTCACCACAGCCAG+GGG | + | chr3.2:81656660-81656679 | None:intergenic | 60.0% | |
| GCATCCTCATCCCAGTCCTC+TGG | + | chr3.2:81656473-81656492 | None:intergenic | 60.0% | |
| GCTCTCTCGTCCCAGTCTTC+TGG | + | chr3.2:81656422-81656441 | None:intergenic | 60.0% | |
| GGCTAACTTCCTGTCCGAGG+AGG | - | chr3.2:81656340-81656359 | MS.gene013210:CDS | 60.0% | |
| GTTTGGTCCAGACAGGTGCG+GGG | - | chr3.2:81656139-81656158 | MS.gene013210:CDS | 60.0% | |
| TCTCGCTTTGGCCTCCTACG+TGG | + | chr3.2:81657618-81657637 | None:intergenic | 60.0% | |
| TGGCCTCCTACGTGGAGCAT+TGG | + | chr3.2:81657610-81657629 | None:intergenic | 60.0% | |
| TGTGAATCAGCCCCTGGCTG+TGG | - | chr3.2:81656647-81656666 | MS.gene013210:intron | 60.0% | |
| TTTGTTGCCCCGCACCTGTC+TGG | + | chr3.2:81656149-81656168 | None:intergenic | 60.0% | |
| ! | GAGCACCGCGATAGCGATAG+GGG | + | chr3.2:81654721-81654740 | None:intergenic | 60.0% |
| !! | AGGAGCACCGCGATAGCGAT+AGG | + | chr3.2:81654723-81654742 | None:intergenic | 60.0% |
| !! | CGAGGGTATTGCTGGCTACC+AGG | - | chr3.2:81656994-81657013 | MS.gene013210:intron | 60.0% |
| !! | GCTGAGTCCGAGGGTATTGC+TGG | - | chr3.2:81656986-81657005 | MS.gene013210:intron | 60.0% |
| !! | GGAGCACCGCGATAGCGATA+GGG | + | chr3.2:81654722-81654741 | None:intergenic | 60.0% |
| GAGGCAGCAGCTGAGTCCGA+GGG | - | chr3.2:81656977-81656996 | MS.gene013210:intron | 65.0% | |
| GCAGGCTAAGGTGGAGGCGA+AGG | - | chr3.2:81657500-81657519 | MS.gene013210:intron | 65.0% | |
| CAGCCCCTGGCTGTGGTGAG+TGG | - | chr3.2:81656654-81656673 | MS.gene013210:intron | 70.0% | |
| GGAGGCAGCAGCTGAGTCCG+AGG | - | chr3.2:81656976-81656995 | MS.gene013210:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 81654699 | 81657644 | 81654699 | ID=MS.gene013210 |
| chr3.2 | mRNA | 81654699 | 81657644 | 81654699 | ID=MS.gene013210.t1;Parent=MS.gene013210 |
| chr3.2 | exon | 81657546 | 81657644 | 81657546 | ID=MS.gene013210.t1.exon1;Parent=MS.gene013210.t1 |
| chr3.2 | CDS | 81657546 | 81657644 | 81657546 | ID=cds.MS.gene013210.t1;Parent=MS.gene013210.t1 |
| chr3.2 | exon | 81657397 | 81657466 | 81657397 | ID=MS.gene013210.t1.exon2;Parent=MS.gene013210.t1 |
| chr3.2 | CDS | 81657397 | 81657466 | 81657397 | ID=cds.MS.gene013210.t1;Parent=MS.gene013210.t1 |
| chr3.2 | exon | 81655328 | 81656457 | 81655328 | ID=MS.gene013210.t1.exon3;Parent=MS.gene013210.t1 |
| chr3.2 | CDS | 81655328 | 81656457 | 81655328 | ID=cds.MS.gene013210.t1;Parent=MS.gene013210.t1 |
| chr3.2 | exon | 81655159 | 81655230 | 81655159 | ID=MS.gene013210.t1.exon4;Parent=MS.gene013210.t1 |
| chr3.2 | CDS | 81655159 | 81655230 | 81655159 | ID=cds.MS.gene013210.t1;Parent=MS.gene013210.t1 |
| chr3.2 | exon | 81654936 | 81655049 | 81654936 | ID=MS.gene013210.t1.exon5;Parent=MS.gene013210.t1 |
| chr3.2 | CDS | 81654936 | 81655049 | 81654936 | ID=cds.MS.gene013210.t1;Parent=MS.gene013210.t1 |
| chr3.2 | exon | 81654699 | 81654839 | 81654699 | ID=MS.gene013210.t1.exon6;Parent=MS.gene013210.t1 |
| chr3.2 | CDS | 81654699 | 81654839 | 81654699 | ID=cds.MS.gene013210.t1;Parent=MS.gene013210.t1 |
| Gene Sequence |
| Protein sequence |
