AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013498

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013498.t1 MTR_3g092780 94.264 645 14 1 6 627 41 685 0.0 1263
MS.gene013498.t1 MTR_3g092780 94.109 645 14 2 6 627 41 684 0.0 1256
MS.gene013498.t1 MTR_3g092780 88.062 645 13 2 6 627 41 644 0.0 1157
MS.gene013498.t1 MTR_3g092780 87.907 645 13 3 6 627 41 643 0.0 1150
MS.gene013498.t1 MTR_7g118260 38.898 617 322 16 14 615 7 583 2.97e-107 336
MS.gene013498.t1 MTR_1g067110 31.044 699 355 20 9 615 73 736 2.26e-68 237
MS.gene013498.t1 MTR_8g024260 39.257 377 189 11 8 357 23 386 1.11e-67 233
MS.gene013498.t1 MTR_7g118260 71.756 131 37 0 14 144 7 137 1.05e-60 212
MS.gene013498.t1 MTR_7g118260 34.118 340 193 11 291 615 223 546 1.09e-30 127
MS.gene013498.t1 MTR_1g067110 29.161 679 354 20 9 595 73 716 7.49e-54 196
MS.gene013498.t1 MTR_4g061360 58.015 131 55 0 12 142 80 210 1.95e-48 181
MS.gene013498.t1 MTR_4g061360 76.000 50 12 0 566 615 714 763 8.40e-18 88.2
MS.gene013498.t1 MTR_7g118260 31.092 476 290 15 155 615 45 497 6.69e-35 139
MS.gene013498.t1 MTR_7g118260 34.118 340 193 11 291 615 90 413 1.49e-30 125
MS.gene013498.t1 MTR_3g037390 45.736 129 70 0 15 143 18 146 3.92e-30 125
MS.gene013498.t1 MTR_3g037390 68.889 45 14 0 573 617 498 542 1.40e-12 70.9
MS.gene013498.t1 MTR_4g108880 44.186 129 72 0 15 143 27 155 1.37e-29 124
MS.gene013498.t1 MTR_4g108880 73.333 45 12 0 573 617 505 549 4.93e-14 75.5
MS.gene013498.t1 MTR_1g098620 81.667 60 11 0 335 394 28 87 3.72e-26 103
MS.gene013498.t1 MTR_1g032570 42.276 123 66 2 21 142 15 133 4.73e-24 107
MS.gene013498.t1 MTR_2g034960 36.306 157 95 2 21 176 33 185 1.28e-23 105
MS.gene013498.t1 MTR_3g086100 41.129 124 68 2 21 143 17 136 1.45e-23 105
MS.gene013498.t1 MTR_4g131580 36.986 146 80 4 21 159 21 161 1.71e-23 105
MS.gene013498.t1 MTR_2g450070 37.903 124 72 2 21 143 22 141 1.89e-23 105
MS.gene013498.t1 MTR_2g450070 37.903 124 72 2 21 143 22 141 2.18e-23 105
MS.gene013498.t1 MTR_4g121020 35.669 157 96 2 21 176 35 187 3.19e-23 105
MS.gene013498.t1 MTR_4g121020 35.669 157 96 2 21 176 35 187 3.30e-23 104
MS.gene013498.t1 MTR_3g106220 30.864 162 99 3 21 181 12 161 4.06e-22 101
MS.gene013498.t1 MTR_8g079940 35.088 171 97 5 21 182 29 194 4.15e-22 100
MS.gene013498.t1 MTR_4g131570 37.008 127 75 2 21 146 21 143 8.68e-22 100
MS.gene013498.t1 MTR_4g131600 34.132 167 89 5 21 180 24 176 1.24e-21 99.8
MS.gene013498.t1 MTR_1g013170 36.220 127 76 2 21 146 9 131 4.43e-21 97.4
MS.gene013498.t1 MTR_3g102600 38.583 127 72 3 21 145 12 134 1.92e-20 89.7
MS.gene013498.t1 MTR_3g102600 33.333 174 95 5 21 192 12 166 6.22e-20 89.7
MS.gene013498.t1 MTR_1g013180 35.766 137 82 3 8 143 148 279 3.17e-19 92.4
MS.gene013498.t1 MTR_7g117705 33.594 128 79 3 21 146 9 132 1.54e-16 83.2
MS.gene013498.t1 MTR_1g049100 30.597 134 82 1 21 143 8 141 1.27e-15 76.3
MS.gene013498.t1 MTR_7g490310 29.496 139 80 2 21 141 9 147 1.88e-15 76.6
MS.gene013498.t1 MTR_3g102590 31.515 165 105 3 21 184 12 169 5.99e-15 75.1
MS.gene013498.t1 MTR_3g102590 30.952 168 108 3 21 187 12 172 6.13e-15 74.3
MS.gene013498.t1 MTR_3g102600 45.000 80 38 3 68 145 10 85 7.66e-15 72.4
MS.gene013498.t1 MTR_5g036480 27.368 190 111 4 21 197 16 191 9.20e-15 74.7
MS.gene013498.t1 MTR_3g102600 45.000 80 38 3 68 145 10 85 3.23e-14 71.6
MS.gene013498.t1 MTR_3g078613 29.851 134 85 2 21 145 23 156 7.65e-14 71.2
MS.gene013498.t1 MTR_4g106590 29.771 131 82 2 21 141 26 156 1.07e-13 71.2
MS.gene013498.t1 MTR_1g067110 37.589 141 69 4 494 615 431 571 2.69e-13 73.2
MS.gene013498.t1 MTR_4g098870 31.469 143 89 4 9 150 8 142 4.13e-13 72.8
MS.gene013498.t1 MTR_4g098870 31.469 143 89 4 9 150 28 162 4.75e-13 72.4
MS.gene013498.t1 MTR_4g098870 31.469 143 89 4 9 150 8 142 4.96e-13 72.4
MS.gene013498.t1 MTR_4g098870 31.469 143 89 4 9 150 28 162 6.17e-13 72.0
MS.gene013498.t1 MTR_4g098870 31.469 143 89 4 9 150 47 181 6.88e-13 72.0
MS.gene013498.t1 MTR_3g037390 68.889 45 14 0 573 617 394 438 1.01e-12 71.2
MS.gene013498.t1 MTR_3g037390 69.048 42 13 0 102 143 1 42 1.50e-12 70.5
MS.gene013498.t1 MTR_1g032570 48.529 68 30 2 76 142 1 64 1.09e-12 71.2
MS.gene013498.t1 MTR_3g078613 29.630 135 85 3 21 145 23 157 2.46e-12 66.6
MS.gene013498.t1 MTR_5g014040 30.070 143 91 4 9 150 8 142 3.50e-12 69.7
MS.gene013498.t1 MTR_5g014040 30.070 143 91 4 9 150 8 142 3.54e-12 69.7
MS.gene013498.t1 MTR_3g086100 47.826 69 31 2 76 143 1 65 4.60e-12 69.3
MS.gene013498.t1 MTR_3g093860 31.746 126 71 3 23 135 20 143 1.15e-11 63.5
MS.gene013498.t1 MTR_3g105710 49.231 65 32 1 560 623 219 283 1.19e-11 66.2
MS.gene013498.t1 MTR_8g038620 27.536 138 83 2 21 141 9 146 2.45e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013498.t1 AT5G24470 42.035 452 176 13 6 432 35 425 2.64e-92 296
MS.gene013498.t1 AT5G24470 68.657 67 11 2 555 615 489 551 8.73e-19 90.5
MS.gene013498.t1 AT2G46790 73.381 139 37 0 4 142 20 158 5.64e-69 231
MS.gene013498.t1 AT2G46790 73.381 139 37 0 4 142 20 158 7.24e-69 231
MS.gene013498.t1 AT2G46790 46.281 121 56 3 502 620 351 464 1.12e-17 86.7
MS.gene013498.t1 AT5G60100 34.293 382 218 8 6 377 49 407 2.95e-52 185
MS.gene013498.t1 AT5G60100 34.293 382 218 8 6 377 49 407 2.95e-52 185
MS.gene013498.t1 AT5G60100 34.293 382 218 8 6 377 49 407 2.95e-52 185
MS.gene013498.t1 AT5G60100 59.124 137 56 0 6 142 49 185 8.92e-52 186
MS.gene013498.t1 AT5G60100 69.841 63 18 1 564 626 433 494 3.30e-17 85.5
MS.gene013498.t1 AT5G60100 59.124 137 56 0 6 142 49 185 8.92e-52 186
MS.gene013498.t1 AT5G60100 69.841 63 18 1 564 626 433 494 3.30e-17 85.5
MS.gene013498.t1 AT5G60100 59.124 137 56 0 6 142 49 185 8.92e-52 186
MS.gene013498.t1 AT5G60100 69.841 63 18 1 564 626 433 494 3.30e-17 85.5
MS.gene013498.t1 AT5G60100 59.124 137 56 0 6 142 49 185 7.97e-51 184
MS.gene013498.t1 AT5G60100 69.841 63 18 1 564 626 460 521 4.44e-17 85.1
MS.gene013498.t1 AT5G02810 56.489 131 57 0 12 142 69 199 5.58e-46 174
MS.gene013498.t1 AT5G02810 83.721 43 7 0 573 615 669 711 7.30e-16 81.6
MS.gene013498.t1 AT5G61380 43.511 131 74 0 13 143 11 141 4.19e-29 122
MS.gene013498.t1 AT5G61380 68.889 45 14 0 573 617 533 577 1.05e-12 71.6
MS.gene013498.t1 AT2G25180 34.804 204 124 3 21 223 17 212 1.55e-25 112
MS.gene013498.t1 AT4G31920 40.164 122 68 2 21 141 17 134 1.23e-22 102
MS.gene013498.t1 AT3G16857 35.172 145 89 2 21 164 37 177 1.17e-21 100
MS.gene013498.t1 AT3G16857 35.172 145 89 2 21 164 37 177 1.18e-21 100
MS.gene013498.t1 AT1G67710 38.281 128 74 2 21 147 11 134 8.77e-21 96.7
MS.gene013498.t1 AT2G01760 40.800 125 68 2 21 143 11 131 1.27e-20 94.7
MS.gene013498.t1 AT5G58080 30.516 213 137 4 11 223 10 211 4.75e-19 91.7
MS.gene013498.t1 AT2G46670 81.250 48 9 0 573 620 132 179 5.34e-19 85.5
MS.gene013498.t1 AT2G46790 81.250 48 9 0 573 620 260 307 3.76e-18 86.3
MS.gene013498.t1 AT2G46790 81.250 48 9 0 573 620 260 307 3.76e-18 86.3
MS.gene013498.t1 AT2G46790 55.294 85 35 2 536 620 266 347 8.06e-18 85.9
MS.gene013498.t1 AT2G46790 80.488 41 8 0 102 142 1 41 4.66e-17 83.6
MS.gene013498.t1 AT2G01760 36.111 144 80 4 7 143 21 159 9.23e-17 83.2
MS.gene013498.t1 AT5G02810 83.721 43 7 0 573 615 525 567 4.73e-16 82.0
MS.gene013498.t1 AT5G02810 54.237 59 23 1 84 142 1 55 1.95e-13 73.9
MS.gene013498.t1 AT3G16857 35.455 110 66 2 56 164 2 107 1.41e-15 80.9
MS.gene013498.t1 AT1G19050 30.597 134 84 2 21 145 24 157 7.73e-15 74.3
MS.gene013498.t1 AT3G62670 30.114 176 110 5 13 184 34 200 1.88e-14 76.3
MS.gene013498.t1 AT1G10470 32.031 128 78 1 23 141 36 163 1.96e-14 74.3
MS.gene013498.t1 AT1G10470 32.031 128 78 1 23 141 22 149 2.27e-14 73.6
MS.gene013498.t1 AT1G59940 32.812 128 77 1 23 141 35 162 2.32e-14 73.6
MS.gene013498.t1 AT1G59940 32.812 128 77 1 23 141 127 254 6.89e-14 73.6
MS.gene013498.t1 AT3G48100 33.333 129 75 3 17 135 22 149 1.93e-13 69.7
MS.gene013498.t1 AT1G74890 30.769 130 81 2 21 141 18 147 2.16e-13 70.1
MS.gene013498.t1 AT3G57040 28.571 140 81 1 21 141 9 148 2.44e-13 70.5
MS.gene013498.t1 AT3G57040 28.571 140 81 1 21 141 9 148 2.44e-13 70.5
MS.gene013498.t1 AT5G62920 29.730 148 91 2 1 135 1 148 5.19e-13 68.6
MS.gene013498.t1 AT2G41310 30.882 136 77 2 23 141 11 146 6.64e-13 68.9
MS.gene013498.t1 AT5G49240 33.835 133 81 3 21 150 42 170 4.48e-12 67.8
MS.gene013498.t1 AT3G56380 28.358 134 86 2 21 144 20 153 1.22e-11 63.5
MS.gene013498.t1 AT4G00760 31.250 160 102 5 39 196 1 154 1.31e-11 67.0
MS.gene013498.t1 AT1G49190 28.689 122 82 2 23 143 36 153 2.33e-11 67.4
MS.gene013498.t1 AT1G49190 28.689 122 82 2 23 143 36 153 3.55e-11 65.9

Find 111 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGAATCCCGATTCTCTTTC+TGG 0.070056 3.4:+84810861 MS.gene013498:CDS
CGCACTTCTCACATTAATTA+TGG 0.184807 3.4:+84808646 MS.gene013498:CDS
TACGAACCTCGCGGTCTAAA+TGG 0.244627 3.4:+84810327 MS.gene013498:CDS
TCTCTTCCGATTCCTGTAAA+AGG 0.269959 3.4:+84810135 MS.gene013498:CDS
GAGCAGCGTCCTCGAGTTAA+AGG 0.270096 3.4:+84810822 MS.gene013498:CDS
CAAGAACTTGACATTCATTT+AGG 0.270340 3.4:+84809248 MS.gene013498:CDS
TCCAGTAGTATTTGTAATAA+TGG 0.285223 3.4:+84810447 MS.gene013498:CDS
GGAATTTGTGGCAGCATGTT+TGG 0.301229 3.4:+84808896 MS.gene013498:CDS
GCCGCAACCGCTGGCATAAA+TGG 0.311050 3.4:+84809050 MS.gene013498:CDS
GCCATTTATGCCAGCGGTTG+CGG 0.331299 3.4:-84809051 None:intergenic
TGCTTGCATTCAAAGAAATA+AGG 0.359592 3.4:+84809157 MS.gene013498:CDS
AAGGAAGCTATTGACTTGAT+TGG 0.361168 3.4:+84809562 MS.gene013498:CDS
ACCAATGCTGGTAAAATTGC+TGG 0.363758 3.4:-84810475 None:intergenic
GTTCCTGTGTATACACAATT+TGG 0.365801 3.4:-84810365 None:intergenic
GTATTGAACTATCTGAGTTA+TGG 0.368410 3.4:-84810059 None:intergenic
GTGTATCACTTTCATCTTGA+GGG 0.373515 3.4:-84809073 None:intergenic
CTTAGAAAATGCAACTATAA+AGG 0.375160 3.4:+84807716 MS.gene013498:CDS
TTCGAGGAACACAACTGAAC+CGG 0.382827 3.4:-84810241 None:intergenic
GAGATCCTTCTCAAAGTTGC+TGG 0.389986 3.4:-84809692 None:intergenic
TGTGTATACACAATTTGGTT+TGG 0.392077 3.4:-84810360 None:intergenic
TGCTGTTGCGGATGGCTTGA+AGG 0.392820 3.4:+84808544 MS.gene013498:CDS
ACAACTGAACCGGGCATTGA+TGG 0.393075 3.4:-84810231 None:intergenic
GATACACTTTGATCAGTTGT+AGG 0.394686 3.4:-84810426 None:intergenic
TCCATTATTACAAATACTAC+TGG 0.397236 3.4:-84810448 None:intergenic
CAGAACAGCAGCAGTTTCAG+AGG 0.404213 3.4:+84810548 MS.gene013498:CDS
CTTAGTTCATTTATTCGAAT+CGG 0.408502 3.4:-84808874 None:intergenic
CATAAGGGTGTGCCTTTCTT+CGG 0.412245 3.4:-84809716 None:intergenic
GAGAAGTGCGTAGCCGGATA+TGG 0.417405 3.4:-84808633 None:intergenic
TGTCCTGCGCGATCACTGCC+TGG 0.417920 3.4:-84809271 None:intergenic
CTGAAGCATTGGAATGCATA+AGG 0.429243 3.4:-84809732 None:intergenic
AATGATCTTTGTATGGCCTA+TGG 0.430478 3.4:+84810168 MS.gene013498:CDS
GTCGATTTGCCAGCCATATC+CGG 0.434584 3.4:+84808620 MS.gene013498:CDS
CGATTCCTGTAAAAGGTGTA+AGG 0.438701 3.4:+84810142 MS.gene013498:CDS
CCAGAAAGAGAATCGGGATT+CGG 0.439697 3.4:-84810861 None:intergenic
TCTTGTGTCTTTATTTCACT+TGG 0.446311 3.4:-84809230 None:intergenic
TTTAATATCATACTTATGAC+AGG 0.452676 3.4:-84808692 None:intergenic
AGAGAGATGTTATGAAAAGA+AGG 0.455803 3.4:+84810659 MS.gene013498:CDS
CCAGGGTTTCGTACACAATC+AGG 0.457218 3.4:+84810204 MS.gene013498:CDS
AATAAGGACTTAATTGAGAA+AGG 0.462433 3.4:+84809173 MS.gene013498:CDS
AAGGTTAAATGATCTTTGTA+TGG 0.462879 3.4:+84810161 MS.gene013498:CDS
CAGCAGTCAGCCGCAACCGC+TGG 0.465375 3.4:+84809041 MS.gene013498:intron
GTGAAATGAAAGGGCTTATG+AGG 0.465706 3.4:+84807609 MS.gene013498:intron
TCAAATTTACTCTACTACTA+AGG 0.467177 3.4:+84809543 MS.gene013498:CDS
GTTTGACCATTCTCCACAGT+TGG 0.467281 3.4:+84809645 MS.gene013498:CDS
ATTCATGCAGGTATACAAAC+AGG 0.476773 3.4:+84809962 MS.gene013498:intron
TAAATGAACTAAGGAATTTG+TGG 0.487302 3.4:+84808884 MS.gene013498:CDS
GCAGTTGCTGCTGTTGCGGA+TGG 0.491463 3.4:+84808536 MS.gene013498:intron
ATACACTTTGATCAGTTGTA+GGG 0.491753 3.4:-84810425 None:intergenic
GAGAAGTTAATTACTACTGC+AGG 0.495962 3.4:-84810000 None:intergenic
AATTCATCAATTGATTGCAC+AGG 0.498212 3.4:+84809619 MS.gene013498:CDS
CCGTTTGAAAGCTGAAGCAT+TGG 0.498244 3.4:-84809743 None:intergenic
TAATGTGAGAAGTGCGTAGC+CGG 0.502440 3.4:-84808639 None:intergenic
TTGCGGATGGCTTGAAGGCA+TGG 0.513970 3.4:+84808549 MS.gene013498:CDS
CCAATGCTTCAGCTTTCAAA+CGG 0.514454 3.4:+84809743 MS.gene013498:CDS
GGAACACAAGTCAGAACATC+CGG 0.514906 3.4:+84810383 MS.gene013498:CDS
ATTACTTCCATAACCAATGC+TGG 0.523079 3.4:-84810487 None:intergenic
AATGAAAGGGCTTATGAGGT+GGG 0.528311 3.4:+84807613 MS.gene013498:intron
TGAAGCATTGGAATGCATAA+GGG 0.528347 3.4:-84809731 None:intergenic
TGTGTATCACTTTCATCTTG+AGG 0.529215 3.4:-84809074 None:intergenic
GAGATAAGTCTTTGATCCTC+CGG 0.529482 3.4:-84810402 None:intergenic
AGTGCGTAGCCGGATATGGC+TGG 0.534736 3.4:-84808629 None:intergenic
AAAGATCCAACTGTGGAGAA+TGG 0.536900 3.4:-84809651 None:intergenic
TGGTGGAAGTGTTGAACCAT+AGG 0.536921 3.4:-84810184 None:intergenic
ATTCACATCGAGCTATGCTA+CGG 0.546537 3.4:+84810601 MS.gene013498:CDS
AGAAGGATCTCACCGAAGAA+AGG 0.548442 3.4:+84809704 MS.gene013498:CDS
AGATCCTTCTCAAAGTTGCT+GGG 0.549454 3.4:-84809691 None:intergenic
AACGCTGCTAGTAATCGTTC+CGG 0.555367 3.4:+84809125 MS.gene013498:CDS
TTTAGGAATGCTAGCATCAG+TGG 0.555975 3.4:+84809496 MS.gene013498:CDS
CGATTCGAATAAATGAACTA+AGG 0.559225 3.4:+84808875 MS.gene013498:CDS
AAATGAAAGGGCTTATGAGG+TGG 0.560859 3.4:+84807612 MS.gene013498:intron
TCGAGGAACACAACTGAACC+GGG 0.562948 3.4:-84810240 None:intergenic
TTGAGCAGTTGCTGCTGTTG+CGG 0.563425 3.4:+84808532 MS.gene013498:intron
ACTTGACATTCATTTAGGCC+AGG 0.566880 3.4:+84809253 MS.gene013498:CDS
AGAACAGCAGCAGTTTCAGA+GGG 0.568196 3.4:+84810549 MS.gene013498:CDS
CAACTTCACATTCTCAGCAA+GGG 0.576831 3.4:+84810109 MS.gene013498:CDS
TGCGGATGGCTTGAAGGCAT+GGG 0.581640 3.4:+84808550 MS.gene013498:CDS
GCAACTTCACATTCTCAGCA+AGG 0.583947 3.4:+84810108 MS.gene013498:CDS
TCAGGTCCACCATCAATGCC+CGG 0.589208 3.4:+84810222 MS.gene013498:CDS
AGCGCAAATAATTGCAAGGA+CGG 0.590278 3.4:+84809457 MS.gene013498:CDS
TCATCCCAGCAACTTTGAGA+AGG 0.593867 3.4:+84809687 MS.gene013498:CDS
ACTGAACCGGGCATTGATGG+TGG 0.596008 3.4:-84810228 None:intergenic
ATTGGTTATGGAAGTAATTG+CGG 0.597392 3.4:+84810492 MS.gene013498:CDS
TTCACATCGAGCTATGCTAC+GGG 0.598642 3.4:+84810602 MS.gene013498:CDS
AAAGAGAATCGGGATTCGGT+TGG 0.599964 3.4:-84810857 None:intergenic
ATAAACAATCAACATGGGTG+AGG 0.602260 3.4:+84807487 None:intergenic
TATGGTTCAACACTTCCACC+AGG 0.607254 3.4:+84810186 MS.gene013498:CDS
GACAAGCGCAAATAATTGCA+AGG 0.612224 3.4:+84809453 MS.gene013498:CDS
GGAAGTAATTGCGGAAGTAG+CGG 0.613525 3.4:+84810501 MS.gene013498:CDS
AATGCAAGCAGCATCACCGC+CGG 0.616301 3.4:-84809144 None:intergenic
ACAAATTGTCCTTTAACTCG+AGG 0.617609 3.4:-84810831 None:intergenic
TTGAGGGCCATTTATGCCAG+CGG 0.618633 3.4:-84809057 None:intergenic
ATCGCGCAGGACAGTCACGC+CGG 0.618782 3.4:+84809281 MS.gene013498:CDS
CCTGATTGTGTACGAAACCC+TGG 0.626598 3.4:-84810204 None:intergenic
AAGGCATGGGAAATACTCAA+AGG 0.628269 3.4:+84808563 MS.gene013498:CDS
TACACTTTGATCAGTTGTAG+GGG 0.630188 3.4:-84810424 None:intergenic
AATGAAGAACTCACAAACAG+TGG 0.636681 3.4:+84810576 MS.gene013498:CDS
AAACCAAATTGTGTATACAC+AGG 0.639133 3.4:+84810362 MS.gene013498:CDS
GAATGCTAGCATCAGTGGTG+AGG 0.644176 3.4:+84809501 MS.gene013498:CDS
AGGCCAGGCAGTGATCGCGC+AGG 0.648174 3.4:+84809268 MS.gene013498:CDS
TTAATATCATACTTATGACA+GGG 0.662751 3.4:-84808691 None:intergenic
GTATACAAATGCATGTTGAG+AGG 0.663604 3.4:+84808829 MS.gene013498:CDS
CTGTTTCCATTTAGACCGCG+AGG 0.673170 3.4:-84810333 None:intergenic
ATGGTTCAACACTTCCACCA+GGG 0.675718 3.4:+84810187 MS.gene013498:CDS
GCGCAGGACAGTCACGCCGG+AGG 0.678639 3.4:+84809284 MS.gene013498:CDS
GCTGCTAGTAATCGTTCCGG+CGG 0.691660 3.4:+84809128 MS.gene013498:CDS
ATGGGTGAGGTTGTAATGAG+TGG 0.695889 3.4:+84807500 MS.gene013498:CDS
CTGAGAGAAAGATCCAACTG+TGG 0.713368 3.4:-84809658 None:intergenic
GAGCAGCTTTACGAACCTCG+CGG 0.732658 3.4:+84810318 MS.gene013498:CDS
ACACAAGTCAGAACATCCGG+AGG 0.742561 3.4:+84810386 MS.gene013498:CDS
AGTATTAGATCAATACTGCG+CGG 0.762909 3.4:-84808590 None:intergenic
GATTGTGTACGAAACCCTGG+TGG 0.767923 3.4:-84810201 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAATTTATTAACAAAATT+GGG + chr3.4:84808987-84809006 MS.gene013498:intron 10.0%
!! TAAGAATTTATTAACAAAAT+TGG + chr3.4:84808986-84809005 MS.gene013498:intron 10.0%
!! TAATAATTACAAAAATTAAG+GGG + chr3.4:84808135-84808154 MS.gene013498:intron 10.0%
!! TCAATAATATAAAATCTTTA+TGG - chr3.4:84808411-84808430 None:intergenic 10.0%
!!! ACTTATTTATACTTTTTAAA+AGG + chr3.4:84810770-84810789 MS.gene013498:intron 10.0%
!! ACGAAAAAATTAGAATAAAA+AGG - chr3.4:84809782-84809801 None:intergenic 15.0%
!! CGAAAAAATTAGAATAAAAA+GGG - chr3.4:84809781-84809800 None:intergenic 15.0%
!!! TTGAACAAACTTTTATTTTT+AGG + chr3.4:84809370-84809389 MS.gene013498:intron 15.0%
!!! TTGAGTTATTTTTTTTATCT+TGG + chr3.4:84808427-84808446 MS.gene013498:intron 15.0%
!! ATTAGAAATTTAGAAGTCTT+TGG + chr3.4:84808042-84808061 MS.gene013498:intron 20.0%
!! GTAAATATTAGGTTATATTG+AGG + chr3.4:84807958-84807977 MS.gene013498:intron 20.0%
!! TTAATATCATACTTATGACA+GGG - chr3.4:84808694-84808713 None:intergenic 20.0%
!! TTTAATATCATACTTATGAC+AGG - chr3.4:84808695-84808714 None:intergenic 20.0%
! AAATTTAGAAGTCTTTGGAT+TGG + chr3.4:84808047-84808066 MS.gene013498:intron 25.0%
! AAGAACTTCAAAACATGATA+CGG + chr3.4:84809845-84809864 MS.gene013498:intron 25.0%
! AAGGTTAAATGATCTTTGTA+TGG + chr3.4:84810161-84810180 MS.gene013498:CDS 25.0%
! AATAAGGACTTAATTGAGAA+AGG + chr3.4:84809173-84809192 MS.gene013498:CDS 25.0%
! AATATTGCTGTGTGTTTAAT+TGG + chr3.4:84807790-84807809 MS.gene013498:intron 25.0%
! AATTACAAAAATTAAGGGGA+TGG + chr3.4:84808139-84808158 MS.gene013498:intron 25.0%
! AGCACAAATAACTGTAAAAA+TGG + chr3.4:84809427-84809446 MS.gene013498:CDS 25.0%
! CTGAAAATCTTAGGAATTTA+TGG + chr3.4:84808292-84808311 MS.gene013498:intron 25.0%
! CTTAGAAAATGCAACTATAA+AGG + chr3.4:84807716-84807735 MS.gene013498:CDS 25.0%
! CTTAGTTCATTTATTCGAAT+CGG - chr3.4:84808877-84808896 None:intergenic 25.0%
! GAATAATTGTACCAAGTTTA+TGG - chr3.4:84808365-84808384 None:intergenic 25.0%
! TAAATGAACTAAGGAATTTG+TGG + chr3.4:84808884-84808903 MS.gene013498:CDS 25.0%
! TCAAATTTACTCTACTACTA+AGG + chr3.4:84809543-84809562 MS.gene013498:CDS 25.0%
! TCCAGTAGTATTTGTAATAA+TGG + chr3.4:84810447-84810466 MS.gene013498:CDS 25.0%
! TCCATTATTACAAATACTAC+TGG - chr3.4:84810451-84810470 None:intergenic 25.0%
! TGCTATAAGACTCTATTTAA+AGG - chr3.4:84808320-84808339 None:intergenic 25.0%
!! ATTTTGTTGCTGAAAATCTT+AGG + chr3.4:84808283-84808302 MS.gene013498:intron 25.0%
!!! TTTATTTTTAGGATTAAGCG+TGG + chr3.4:84809381-84809400 MS.gene013498:intron 25.0%
!!! TTTTTTAAAGAGAAGTGACA+GGG + chr3.4:84808260-84808279 MS.gene013498:intron 25.0%
AAACCAAATTGTGTATACAC+AGG + chr3.4:84810362-84810381 MS.gene013498:CDS 30.0%
AATTCATCAATTGATTGCAC+AGG + chr3.4:84809619-84809638 MS.gene013498:CDS 30.0%
AGAGAGATGTTATGAAAAGA+AGG + chr3.4:84810659-84810678 MS.gene013498:CDS 30.0%
ATACACTTTGATCAGTTGTA+GGG - chr3.4:84810428-84810447 None:intergenic 30.0%
ATAGCAGTATGACAATTACT+AGG + chr3.4:84808334-84808353 MS.gene013498:intron 30.0%
ATTGGTTATGGAAGTAATTG+CGG + chr3.4:84810492-84810511 MS.gene013498:CDS 30.0%
CAAGAACTTGACATTCATTT+AGG + chr3.4:84809248-84809267 MS.gene013498:CDS 30.0%
CGATTCGAATAAATGAACTA+AGG + chr3.4:84808875-84808894 MS.gene013498:CDS 30.0%
GAAAGAAAGAAATTTACCTC+CGG - chr3.4:84809303-84809322 None:intergenic 30.0%
GTATTGAACTATCTGAGTTA+TGG - chr3.4:84810062-84810081 None:intergenic 30.0%
TGCTTGCATTCAAAGAAATA+AGG + chr3.4:84809157-84809176 MS.gene013498:CDS 30.0%
TGGTGAGAAAATAGTAAGAT+TGG + chr3.4:84807520-84807539 MS.gene013498:intron 30.0%
TGTGTATACACAATTTGGTT+TGG - chr3.4:84810363-84810382 None:intergenic 30.0%
! ATCTCTCTTTTCGTTTCAAA+CGG - chr3.4:84810647-84810666 None:intergenic 30.0%
! GTGTATGATTTTTATGCTTG+TGG + chr3.4:84809881-84809900 MS.gene013498:intron 30.0%
! TCAGATTCTTTTTGCATACT+TGG - chr3.4:84810084-84810103 None:intergenic 30.0%
! TCTTGTGTCTTTATTTCACT+TGG - chr3.4:84809233-84809252 None:intergenic 30.0%
! TTTAACCTTACACCTTTTAC+AGG - chr3.4:84810150-84810169 None:intergenic 30.0%
! TTTTTCTCCAGAAAGAGAAT+CGG - chr3.4:84810871-84810890 None:intergenic 30.0%
!!! AATTTTACCAGCATTGGTTA+TGG + chr3.4:84810480-84810499 MS.gene013498:CDS 30.0%
!!! GAATTTTTGAGACTGCAATT+CGG - chr3.4:84809604-84809623 None:intergenic 30.0%
!!! GTTTTTTAAAGAGAAGTGAC+AGG + chr3.4:84808259-84808278 MS.gene013498:intron 30.0%
AAATTGTGTTCCATTCATGC+AGG + chr3.4:84809950-84809969 MS.gene013498:intron 35.0%
AATGAAGAACTCACAAACAG+TGG + chr3.4:84810576-84810595 MS.gene013498:CDS 35.0%
AATGATCTTTGTATGGCCTA+TGG + chr3.4:84810168-84810187 MS.gene013498:CDS 35.0%
ACAAATTGTCCTTTAACTCG+AGG - chr3.4:84810834-84810853 None:intergenic 35.0%
ACTAGGTTAAGCCATAAACT+TGG + chr3.4:84808351-84808370 MS.gene013498:intron 35.0%
AGTAAGATTGGAAGAAGAAG+AGG + chr3.4:84807532-84807551 MS.gene013498:intron 35.0%
AGTATTAGATCAATACTGCG+CGG - chr3.4:84808593-84808612 None:intergenic 35.0%
ATTACTTCCATAACCAATGC+TGG - chr3.4:84810490-84810509 None:intergenic 35.0%
ATTCATGCAGGTATACAAAC+AGG + chr3.4:84809962-84809981 MS.gene013498:intron 35.0%
CGCACTTCTCACATTAATTA+TGG + chr3.4:84808646-84808665 MS.gene013498:CDS 35.0%
GAGAAGTTAATTACTACTGC+AGG - chr3.4:84810003-84810022 None:intergenic 35.0%
GATACACTTTGATCAGTTGT+AGG - chr3.4:84810429-84810448 None:intergenic 35.0%
GGAGAAATTCTTGCCAAAAA+TGG + chr3.4:84807634-84807653 MS.gene013498:CDS 35.0%
GTATACAAATGCATGTTGAG+AGG + chr3.4:84808829-84808848 MS.gene013498:CDS 35.0%
GTGTATCACTTTCATCTTGA+GGG - chr3.4:84809076-84809095 None:intergenic 35.0%
GTTCCTGTGTATACACAATT+TGG - chr3.4:84810368-84810387 None:intergenic 35.0%
TACACTTTGATCAGTTGTAG+GGG - chr3.4:84810427-84810446 None:intergenic 35.0%
TGTGTATCACTTTCATCTTG+AGG - chr3.4:84809077-84809096 None:intergenic 35.0%
TGTTTGTATACCTGCATGAA+TGG - chr3.4:84809963-84809982 None:intergenic 35.0%
! CTTACACCTTTTACAGGAAT+CGG - chr3.4:84810144-84810163 None:intergenic 35.0%
! TTTTCTCCAGAAAGAGAATC+GGG - chr3.4:84810870-84810889 None:intergenic 35.0%
!! AAGGAAGCTATTGACTTGAT+TGG + chr3.4:84809562-84809581 MS.gene013498:CDS 35.0%
!! GCAAATTTTGGAAAGGATCA+AGG + chr3.4:84808073-84808092 MS.gene013498:intron 35.0%
!! TCTTGCCAAAAATGGTTTTG+AGG + chr3.4:84807642-84807661 MS.gene013498:CDS 35.0%
!! TGAAGCATTGGAATGCATAA+GGG - chr3.4:84809734-84809753 None:intergenic 35.0%
!! TTGGACTGCAAATTTTGGAA+AGG + chr3.4:84808066-84808085 MS.gene013498:intron 35.0%
!! TTGGATTGGACTGCAAATTT+TGG + chr3.4:84808061-84808080 MS.gene013498:intron 35.0%
!!! CTTGCCAAAAATGGTTTTGA+GGG + chr3.4:84807643-84807662 MS.gene013498:CDS 35.0%
AAAGATCCAACTGTGGAGAA+TGG - chr3.4:84809654-84809673 None:intergenic 40.0%
AAATGAAAGGGCTTATGAGG+TGG + chr3.4:84807612-84807631 MS.gene013498:intron 40.0%
AAGGCATGGGAAATACTCAA+AGG + chr3.4:84808563-84808582 MS.gene013498:CDS 40.0%
AATGAAAGGGCTTATGAGGT+GGG + chr3.4:84807613-84807632 MS.gene013498:intron 40.0%
ACCAATGCTGGTAAAATTGC+TGG - chr3.4:84810478-84810497 None:intergenic 40.0%
ACTTGACATTCATTTAGGCC+AGG + chr3.4:84809253-84809272 MS.gene013498:CDS 40.0%
AGATCCTTCTCAAAGTTGCT+GGG - chr3.4:84809694-84809713 None:intergenic 40.0%
AGCGCAAATAATTGCAAGGA+CGG + chr3.4:84809457-84809476 MS.gene013498:CDS 40.0%
ATTCACATCGAGCTATGCTA+CGG + chr3.4:84810601-84810620 MS.gene013498:CDS 40.0%
ATTGGAAGAAGAAGAGGAGA+AGG + chr3.4:84807538-84807557 MS.gene013498:intron 40.0%
CAACTTCACATTCTCAGCAA+GGG + chr3.4:84810109-84810128 MS.gene013498:CDS 40.0%
CCAATGCTTCAGCTTTCAAA+CGG + chr3.4:84809743-84809762 MS.gene013498:CDS 40.0%
GACAAGCGCAAATAATTGCA+AGG + chr3.4:84809453-84809472 MS.gene013498:CDS 40.0%
GAGATAAGTCTTTGATCCTC+CGG - chr3.4:84810405-84810424 None:intergenic 40.0%
GCATGCAGAATTCAACAAAG+CGG - chr3.4:84809921-84809940 None:intergenic 40.0%
GTGAAATGAAAGGGCTTATG+AGG + chr3.4:84807609-84807628 MS.gene013498:intron 40.0%
GTTTGGAGAAGACAATCAGT+AGG + chr3.4:84808913-84808932 MS.gene013498:intron 40.0%
TCTCTTCCGATTCCTGTAAA+AGG + chr3.4:84810135-84810154 MS.gene013498:CDS 40.0%
TTTAGGAATGCTAGCATCAG+TGG + chr3.4:84809496-84809515 MS.gene013498:CDS 40.0%
! AGCACCCTCAAAACCATTTT+TGG - chr3.4:84807650-84807669 None:intergenic 40.0%
! CGATTCCTGTAAAAGGTGTA+AGG + chr3.4:84810142-84810161 MS.gene013498:CDS 40.0%
!! ATCATTTTGTTCGACTCGCA+AGG + chr3.4:84809331-84809350 MS.gene013498:intron 40.0%
!! CTGAAGCATTGGAATGCATA+AGG - chr3.4:84809735-84809754 None:intergenic 40.0%
!!! AATGGTTTTGAGGGTGCTTT+TGG + chr3.4:84807652-84807671 MS.gene013498:CDS 40.0%
!!! CTGCTTGAAAGTTTTGTTCG+AGG - chr3.4:84810260-84810279 None:intergenic 40.0%
!!! GCGATGATCAAGAGCATTTT+AGG + chr3.4:84809479-84809498 MS.gene013498:CDS 40.0%
AACGCTGCTAGTAATCGTTC+CGG + chr3.4:84809125-84809144 MS.gene013498:CDS 45.0%
AAGAAGAAGAGGAGAAGGTG+AGG + chr3.4:84807543-84807562 MS.gene013498:intron 45.0%
AGAACAGCAGCAGTTTCAGA+GGG + chr3.4:84810549-84810568 MS.gene013498:CDS 45.0%
AGAAGAAGAGGAGAAGGTGA+GGG + chr3.4:84807544-84807563 MS.gene013498:intron 45.0%
AGAAGGATCTCACCGAAGAA+AGG + chr3.4:84809704-84809723 MS.gene013498:CDS 45.0%
AGAAGGTGAGGGAAGAAGAA+GGG + chr3.4:84807555-84807574 MS.gene013498:intron 45.0%
AGCGTGGCTAACTGCAAAAA+TGG + chr3.4:84809397-84809416 MS.gene013498:CDS 45.0%
ATGGGTGAGGTTGTAATGAG+TGG + chr3.4:84807500-84807519 MS.gene013498:CDS 45.0%
ATGGTTCAACACTTCCACCA+GGG + chr3.4:84810187-84810206 MS.gene013498:CDS 45.0%
CCAGAAAGAGAATCGGGATT+CGG - chr3.4:84810864-84810883 None:intergenic 45.0%
CCGTTTGAAAGCTGAAGCAT+TGG - chr3.4:84809746-84809765 None:intergenic 45.0%
CTGAGAGAAAGATCCAACTG+TGG - chr3.4:84809661-84809680 None:intergenic 45.0%
GAGATCCTTCTCAAAGTTGC+TGG - chr3.4:84809695-84809714 None:intergenic 45.0%
GCAACTTCACATTCTCAGCA+AGG + chr3.4:84810108-84810127 MS.gene013498:CDS 45.0%
GGAACACAAGTCAGAACATC+CGG + chr3.4:84810383-84810402 MS.gene013498:CDS 45.0%
GGAAGTAATTGCGGAAGTAG+CGG + chr3.4:84810501-84810520 MS.gene013498:CDS 45.0%
GGAATTTGTGGCAGCATGTT+TGG + chr3.4:84808896-84808915 MS.gene013498:CDS 45.0%
GGCTAACTGCAAAAATGGAG+TGG + chr3.4:84809402-84809421 MS.gene013498:CDS 45.0%
GTTTGACCATTCTCCACAGT+TGG + chr3.4:84809645-84809664 MS.gene013498:CDS 45.0%
TATGGTTCAACACTTCCACC+AGG + chr3.4:84810186-84810205 MS.gene013498:CDS 45.0%
TGGAAAGGATCAAGGCTCAA+CGG + chr3.4:84808081-84808100 MS.gene013498:intron 45.0%
TTCACATCGAGCTATGCTAC+GGG + chr3.4:84810602-84810621 MS.gene013498:CDS 45.0%
TTCGAGGAACACAACTGAAC+CGG - chr3.4:84810244-84810263 None:intergenic 45.0%
! AAAGAGAATCGGGATTCGGT+TGG - chr3.4:84810860-84810879 None:intergenic 45.0%
! CATAAGGGTGTGCCTTTCTT+CGG - chr3.4:84809719-84809738 None:intergenic 45.0%
! GAGGTGGTGGTGAAATGAAA+GGG + chr3.4:84807600-84807619 MS.gene013498:intron 45.0%
! GCCAGCAATTTTACCAGCAT+TGG + chr3.4:84810474-84810493 MS.gene013498:CDS 45.0%
! TAATGTGAGAAGTGCGTAGC+CGG - chr3.4:84808642-84808661 None:intergenic 45.0%
! TCATCCCAGCAACTTTGAGA+AGG + chr3.4:84809687-84809706 MS.gene013498:CDS 45.0%
!! TGGTGGAAGTGTTGAACCAT+AGG - chr3.4:84810187-84810206 None:intergenic 45.0%
!! AATTAATTTAAGTATTAATA+AGG - chr3.4:84808750-84808769 None:intergenic 5.0%
!! TTAATAATTACAAAAATTAA+GGG + chr3.4:84808134-84808153 MS.gene013498:intron 5.0%
!! TTTAATAATTACAAAAATTA+AGG + chr3.4:84808133-84808152 MS.gene013498:intron 5.0%
!! TTTAATTAATTGTAAATATT+AGG + chr3.4:84807947-84807966 MS.gene013498:intron 5.0%
ACACAAGTCAGAACATCCGG+AGG + chr3.4:84810386-84810405 MS.gene013498:CDS 50.0%
AGTGGAACTGAGAGTAGAGG+AGG + chr3.4:84807578-84807597 MS.gene013498:intron 50.0%
CAGAACAGCAGCAGTTTCAG+AGG + chr3.4:84810548-84810567 MS.gene013498:CDS 50.0%
CCAGGGTTTCGTACACAATC+AGG + chr3.4:84810204-84810223 MS.gene013498:CDS 50.0%
CCGAATCCCGATTCTCTTTC+TGG + chr3.4:84810861-84810880 MS.gene013498:CDS 50.0%
CCTGATTGTGTACGAAACCC+TGG - chr3.4:84810207-84810226 None:intergenic 50.0%
CTGTTTCCATTTAGACCGCG+AGG - chr3.4:84810336-84810355 None:intergenic 50.0%
GAATCTTGCGACGACATCAC+TGG - chr3.4:84808799-84808818 None:intergenic 50.0%
GAATGCTAGCATCAGTGGTG+AGG + chr3.4:84809501-84809520 MS.gene013498:CDS 50.0%
GAGAAGGTGAGGGAAGAAGA+AGG + chr3.4:84807554-84807573 MS.gene013498:intron 50.0%
GATTGTGTACGAAACCCTGG+TGG - chr3.4:84810204-84810223 None:intergenic 50.0%
TACGAACCTCGCGGTCTAAA+TGG + chr3.4:84810327-84810346 MS.gene013498:CDS 50.0%
TCGAGGAACACAACTGAACC+GGG - chr3.4:84810243-84810262 None:intergenic 50.0%
TTGAGCAGTTGCTGCTGTTG+CGG + chr3.4:84808532-84808551 MS.gene013498:intron 50.0%
TTGAGGGCCATTTATGCCAG+CGG - chr3.4:84809060-84809079 None:intergenic 50.0%
! GGAGGTGGTGGTGAAATGAA+AGG + chr3.4:84807599-84807618 MS.gene013498:intron 50.0%
!! ACAACTGAACCGGGCATTGA+TGG - chr3.4:84810234-84810253 None:intergenic 50.0%
!! AGCAGCGTTGTTTTCAGCAG+TGG - chr3.4:84809114-84809133 None:intergenic 50.0%
!! GTCGATTTGCCAGCCATATC+CGG + chr3.4:84808620-84808639 MS.gene013498:CDS 50.0%
AATGCAAGCAGCATCACCGC+CGG - chr3.4:84809147-84809166 None:intergenic 55.0%
ACTGAGAGTAGAGGAGGAGG+TGG + chr3.4:84807584-84807603 MS.gene013498:intron 55.0%
GAGCAGCGTCCTCGAGTTAA+AGG + chr3.4:84810822-84810841 MS.gene013498:CDS 55.0%
GAGCAGCTTTACGAACCTCG+CGG + chr3.4:84810318-84810337 MS.gene013498:CDS 55.0%
GCCATTTATGCCAGCGGTTG+CGG - chr3.4:84809054-84809073 None:intergenic 55.0%
GCTGCTAGTAATCGTTCCGG+CGG + chr3.4:84809128-84809147 MS.gene013498:CDS 55.0%
GGAACTGAGAGTAGAGGAGG+AGG + chr3.4:84807581-84807600 MS.gene013498:intron 55.0%
GGGAGTGGAACTGAGAGTAG+AGG + chr3.4:84807575-84807594 MS.gene013498:intron 55.0%
GTGAGGGAAGAAGAAGGGAG+TGG + chr3.4:84807560-84807579 MS.gene013498:intron 55.0%
TCAGGTCCACCATCAATGCC+CGG + chr3.4:84810222-84810241 MS.gene013498:CDS 55.0%
TGCTGTTGCGGATGGCTTGA+AGG + chr3.4:84808544-84808563 MS.gene013498:CDS 55.0%
TTGCGGATGGCTTGAAGGCA+TGG + chr3.4:84808549-84808568 MS.gene013498:CDS 55.0%
! GAGAAGTGCGTAGCCGGATA+TGG - chr3.4:84808636-84808655 None:intergenic 55.0%
! TGCGGATGGCTTGAAGGCAT+GGG + chr3.4:84808550-84808569 MS.gene013498:CDS 55.0%
!! ACTGAACCGGGCATTGATGG+TGG - chr3.4:84810231-84810250 None:intergenic 55.0%
AGTGCGTAGCCGGATATGGC+TGG - chr3.4:84808632-84808651 None:intergenic 60.0%
GAGAGTAGAGGAGGAGGTGG+TGG + chr3.4:84807587-84807606 MS.gene013498:intron 60.0%
GCAGTTGCTGCTGTTGCGGA+TGG + chr3.4:84808536-84808555 MS.gene013498:intron 60.0%
GCCGCAACCGCTGGCATAAA+TGG + chr3.4:84809050-84809069 MS.gene013498:CDS 60.0%
ATCGCGCAGGACAGTCACGC+CGG + chr3.4:84809281-84809300 MS.gene013498:CDS 65.0%
TGTCCTGCGCGATCACTGCC+TGG - chr3.4:84809274-84809293 None:intergenic 65.0%
AGGCCAGGCAGTGATCGCGC+AGG + chr3.4:84809268-84809287 MS.gene013498:CDS 70.0%
CAGCAGTCAGCCGCAACCGC+TGG + chr3.4:84809041-84809060 MS.gene013498:intron 70.0%
GCGCAGGACAGTCACGCCGG+AGG + chr3.4:84809284-84809303 MS.gene013498:CDS 75.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 84807500 84810899 84807500 ID=MS.gene013498
chr3.4 mRNA 84807500 84810899 84807500 ID=MS.gene013498.t1;Parent=MS.gene013498
chr3.4 exon 84807500 84807521 84807500 ID=MS.gene013498.t1.exon1;Parent=MS.gene013498.t1
chr3.4 CDS 84807500 84807521 84807500 ID=cds.MS.gene013498.t1;Parent=MS.gene013498.t1
chr3.4 exon 84807621 84807737 84807621 ID=MS.gene013498.t1.exon2;Parent=MS.gene013498.t1
chr3.4 CDS 84807621 84807737 84807621 ID=cds.MS.gene013498.t1;Parent=MS.gene013498.t1
chr3.4 exon 84808540 84808701 84808540 ID=MS.gene013498.t1.exon3;Parent=MS.gene013498.t1
chr3.4 CDS 84808540 84808701 84808540 ID=cds.MS.gene013498.t1;Parent=MS.gene013498.t1
chr3.4 exon 84808800 84808930 84808800 ID=MS.gene013498.t1.exon4;Parent=MS.gene013498.t1
chr3.4 CDS 84808800 84808930 84808800 ID=cds.MS.gene013498.t1;Parent=MS.gene013498.t1
chr3.4 exon 84809044 84809305 84809044 ID=MS.gene013498.t1.exon5;Parent=MS.gene013498.t1
chr3.4 CDS 84809044 84809305 84809044 ID=cds.MS.gene013498.t1;Parent=MS.gene013498.t1
chr3.4 exon 84809392 84809764 84809392 ID=MS.gene013498.t1.exon6;Parent=MS.gene013498.t1
chr3.4 CDS 84809392 84809764 84809392 ID=cds.MS.gene013498.t1;Parent=MS.gene013498.t1
chr3.4 exon 84809972 84810680 84809972 ID=MS.gene013498.t1.exon7;Parent=MS.gene013498.t1
chr3.4 CDS 84809972 84810680 84809972 ID=cds.MS.gene013498.t1;Parent=MS.gene013498.t1
chr3.4 exon 84810792 84810899 84810792 ID=MS.gene013498.t1.exon8;Parent=MS.gene013498.t1
chr3.4 CDS 84810792 84810899 84810792 ID=cds.MS.gene013498.t1;Parent=MS.gene013498.t1
Gene Sequence

>MS.gene013498

ATGGGTGAGGTTGTAATGAGTGGTGAGAAAATAGTAAGATTGGAAGAAGAAGAGGAGAAGGTGAGGGAAGAAGAAGGGAGTGGAACTGAGAGTAGAGGAGGAGGTGGTGGTGAAATGAAAGGGCTTATGAGGTGGGAGAAATTCTTGCCAAAAATGGTTTTGAGGGTGCTTTTGGTTGAAGCTGATGATTGTACAAGACAGATTATTACAGCACTTCTTAGAAAATGCAACTATAAAGGTACTATTTGTATAATTATTGTTTTTTCTCTGATTTCATTGTTTTGTTTTGTAATATTGCTGTGTGTTTAATTGGTTATTCAATTTTCTGTAAGTATTCTCAATTTTCAATTTTATGTGCTCAATTGCTTACTGTCATATGAGCATGTTGCTCTGATTATTCATATTTTTTCATATGTACAATTTTTTTTTTTTGTGTGTTAAATTTGATTTAATTAATTGTAAATATTAGGTTATATTGAGGCTGAGTTGTTAATTAAGAGTATATATTTGACATGACAAAAATAAAATAAAAGCTACTAGTAATTAGAAATTTAGAAGTCTTTGGATTGGACTGCAAATTTTGGAAAGGATCAAGGCTCAACGGTGTACTGATAGATTTGTATATTTTGATGATTTAATAATTACAAAAATTAAGGGGATGGAAAACAAAATTTGTGTGCACAAATTAATTGAAGACATTTTGTTTTTAATATTGTTTGATAAATTTTAACTCGAGAAAAAATGTAAAAAATTATGTATGTTTTTTAAAGAGAAGTGACAGGGATTTTGTTGCTGAAAATCTTAGGAATTTATGGCACCTTTAAATAGAGTCTTATAGCAGTATGACAATTACTAGGTTAAGCCATAAACTTGGTACAATTATTCAATTTATTTTCAATTTTTATCTGCCATAAAGATTTTATATTATTGAGTTATTTTTTTTATCTTGGTTGTATTGTAATTTGAATAAGAAAATTAGTGTACTTGAAAGTAAATCTAAGCTCTAGAACTTCAAAATAACTTTGATCTGTTTTGAGCAGTTGCTGCTGTTGCGGATGGCTTGAAGGCATGGGAAATACTCAAAGGAAGACCGCGCAGTATTGATCTAATACTTACAGAAGTCGATTTGCCAGCCATATCCGGCTACGCACTTCTCACATTAATTATGGAGCATGATATTTGCAAAAGCATCCCTGTCATAAGTATGATATTAAAGATAAATTTTCTTTCTGCTTGTCAATTTGTTTCCTTATTAATACTTAAATTAATTGTTCTGTATTTTTTTTTCATGTTTTTCCAGTGATGTCGTCGCAAGATTCAGTTAGCACAGTATACAAATGCATGTTGAGAGGTGCAGCTGACTATCTTGTTAAGCCGATTCGAATAAATGAACTAAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCAGTAGGACTTCTGCTCTCTCAATTTTCAGTTCGTTTTCAGTTTCTCTCTAAAATACTAAGAATTTATTAACAAAATTGGGTGAACTTATGTTTATTATTTGTTTACTCTATCAGCAGTCAGCCGCAACCGCTGGCATAAATGGCCCTCAAGATGAAAGTGATACACAACAGAAGTTTGAAGCCACTGCTGAAAACAACGCTGCTAGTAATCGTTCCGGCGGTGATGCTGCTTGCATTCAAAGAAATAAGGACTTAATTGAGAAAGGAAGTGATGCACAGAGCTCTTGTGCTGAAGCATATCCAAGTGAAATAAAGACACAAGAACTTGACATTCATTTAGGCCAGGCAGTGATCGCGCAGGACAGTCACGCCGGAGGTAAATTTCTTTCTTTCACAGCAATATCATTTTGTTCGACTCGCAAGGAAGAATTGTCAAAAATTTGAACAAACTTTTATTTTTAGGATTAAGCGTGGCTAACTGCAAAAATGGAGTGGCAAGCACAAATAACTGTAAAAATGGAGAGACAAGCGCAAATAATTGCAAGGACGGCGATGATCAAGAGCATTTTAGGAATGCTAGCATCAGTGGTGAGGTTCATGACAATCACTATGATCAAATTTACTCTACTACTAAGGAAGCTATTGACTTGATTGGAGCATTTCGTACTGATCCGAATTGCAGTCTCAAAAATTCATCAATTGATTGCACAGGCAAGTTTGACCATTCTCCACAGTTGGATCTTTCTCTCAGAAGCTCTCATCCCAGCAACTTTGAGAAGGATCTCACCGAAGAAAGGCACACCCTTATGCATTCCAATGCTTCAGCTTTCAAACGGTAATTGCTAAATCCCTTTTTATTCTAATTTTTTCGTTTCTGTGTAATTAAAAATTGTTGTACTCTTAGTGATGAGTTTGAAGAACTTCAAAACATGATACGGATGAAGCTAGCAAGTGTATGATTTTTATGCTTGTGGTCTCTATAACTTCTCCGCTTTGTTGAATTCTGCATGCTTATCACTGAAATTGTGTTCCATTCATGCAGGTATACAAACAGGCAATTGCAAGCGTCACCTGCAGTAGTAATTAACTTCTCTGATCAACAAAGAGAACAAAAAACAAATAATGAGAACCATAACTCAGATAGTTCAATACCAAGTATGCAAAAAGAATCTGAACTTGCAACTTCACATTCTCAGCAAGGGCATTCTCTTCCGATTCCTGTAAAAGGTGTAAGGTTAAATGATCTTTGTATGGCCTATGGTTCAACACTTCCACCAGGGTTTCGTACACAATCAGGTCCACCATCAATGCCCGGTTCAGTTGTGTTCCTCGAACAAAACTTTCAAGCAGATGCATTTTATCAGTCAAATGTTAAAGAAAATAATTCAGAGCAGCTTTACGAACCTCGCGGTCTAAATGGAAACAGCACTCCAAACCAAATTGTGTATACACAGGAACACAAGTCAGAACATCCGGAGGATCAAAGACTTATCTCCCCTACAACTGATCAAAGTGTATCCAGTAGTATTTGTAATAATGGAAATGCCAGCAATTTTACCAGCATTGGTTATGGAAGTAATTGCGGAAGTAGCGGCAATGTTGAACAAGTTGCAACTTTCAGAACAGCAGCAGTTTCAGAGGGAAAGAATGAAGAACTCACAAACAGTGGATATTCACATCGAGCTATGCTACGGGAAGCAGCTCTAAACAAGTTCCGTTTGAAACGAAAAGAGAGATGTTATGAAAAGAAGGTATATCAATATCAATATGAGCTTGTAATTATACTAGCATGATCATTGATCAATGATCATCATTGTTTATTTGTTTTCATATTATGCTAACTTATTTATACTTTTTAAAAGGTTCGATATGAGAGCAGAAAGAAACTAGCAGAGCAGCGTCCTCGAGTTAAAGGACAATTTGTTCGCCAACCGAATCCCGATTCTCTTTCTGGAGAAAAAGATTGCTAA
Protein sequence

>MS.gene013498.t1

MGEVVMSGLMRWEKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILTEVDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHVWRRQSQSAATAGINGPQDESDTQQKFEATAENNAASNRSGGDAACIQRNKDLIEKGSDAQSSCAEAYPSEIKTQELDIHLGQAVIAQDSHAGGLSVANCKNGVASTNNCKNGETSANNCKDGDDQEHFRNASISGEVHDNHYDQIYSTTKEAIDLIGAFRTDPNCSLKNSSIDCTGKFDHSPQLDLSLRSSHPSNFEKDLTEERHTLMHSNASAFKRYTNRQLQASPAVVINFSDQQREQKTNNENHNSDSSIPSMQKESELATSHSQQGHSLPIPVKGVRLNDLCMAYGSTLPPGFRTQSGPPSMPGSVVFLEQNFQADAFYQSNVKENNSEQLYEPRGLNGNSTPNQIVYTQEHKSEHPEDQRLISPTTDQSVSSSICNNGNASNFTSIGYGSNCGSSGNVEQVATFRTAAVSEGKNEELTNSGYSHRAMLREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQPNPDSLSGEKDC