Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013630.t1 | XP_003602198.1 | 98.2 | 514 | 9 | 0 | 1 | 514 | 1 | 514 | 1.10E-277 | 965.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013630.t1 | Q9ZNX9 | 57.3 | 517 | 218 | 1 | 1 | 514 | 1 | 517 | 1.2e-150 | 534.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013630.t1 | G7J6R7 | 98.2 | 514 | 9 | 0 | 1 | 514 | 1 | 514 | 8.1e-278 | 965.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene47969 | MS.gene013630 | PPI |
| MS.gene030874 | MS.gene013630 | PPI |
| MS.gene013630 | MS.gene57358 | PPI |
| MS.gene27999 | MS.gene013630 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013630.t1 | MTR_3g090900 | 98.249 | 514 | 9 | 0 | 1 | 514 | 1 | 514 | 0.0 | 1029 |
| MS.gene013630.t1 | MTR_3g090900 | 97.351 | 453 | 12 | 0 | 1 | 453 | 1 | 453 | 0.0 | 900 |
| MS.gene013630.t1 | MTR_3g090900 | 97.514 | 362 | 9 | 0 | 1 | 362 | 1 | 362 | 0.0 | 723 |
| MS.gene013630.t1 | MTR_3g118290 | 29.167 | 288 | 199 | 3 | 229 | 514 | 287 | 571 | 1.12e-33 | 134 |
| MS.gene013630.t1 | MTR_7g101840 | 31.000 | 300 | 202 | 4 | 216 | 513 | 257 | 553 | 6.37e-32 | 129 |
| MS.gene013630.t1 | MTR_1g063850 | 29.167 | 288 | 199 | 3 | 216 | 501 | 261 | 545 | 5.03e-30 | 124 |
| MS.gene013630.t1 | MTR_0172s0030 | 30.565 | 301 | 181 | 10 | 222 | 505 | 204 | 493 | 1.37e-23 | 104 |
| MS.gene013630.t1 | MTR_3g033420 | 32.394 | 213 | 140 | 3 | 305 | 514 | 192 | 403 | 3.88e-19 | 90.1 |
| MS.gene013630.t1 | MTR_1g007370 | 25.573 | 262 | 181 | 6 | 256 | 513 | 296 | 547 | 1.44e-16 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013630.t1 | AT5G24120 | 61.804 | 521 | 188 | 4 | 1 | 514 | 1 | 517 | 0.0 | 626 |
| MS.gene013630.t1 | AT5G24120 | 61.804 | 521 | 188 | 4 | 1 | 514 | 1 | 517 | 0.0 | 626 |
| MS.gene013630.t1 | AT5G24120 | 61.804 | 521 | 188 | 4 | 1 | 514 | 1 | 517 | 0.0 | 626 |
| MS.gene013630.t1 | AT2G36990 | 31.000 | 300 | 202 | 3 | 216 | 513 | 247 | 543 | 3.46e-35 | 139 |
| MS.gene013630.t1 | AT1G08540 | 31.250 | 288 | 193 | 3 | 229 | 514 | 285 | 569 | 1.15e-34 | 137 |
| MS.gene013630.t1 | AT5G13730 | 27.848 | 316 | 196 | 9 | 215 | 512 | 113 | 414 | 1.38e-21 | 97.4 |
| MS.gene013630.t1 | AT1G64860 | 28.094 | 299 | 191 | 8 | 222 | 505 | 202 | 491 | 8.67e-21 | 95.9 |
| MS.gene013630.t1 | AT1G64860 | 28.497 | 193 | 130 | 4 | 222 | 410 | 202 | 390 | 5.17e-16 | 81.3 |
| MS.gene013630.t1 | AT3G53920 | 25.263 | 285 | 197 | 7 | 237 | 513 | 293 | 569 | 7.01e-14 | 74.7 |
Find 107 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCCAATAGCCCAAGGTTTC+AGG | 0.142879 | 3.4:+83196559 | MS.gene013630:CDS |
| CTTTGTCAGGCTGGAGTTAA+AGG | 0.217936 | 3.4:+83196584 | MS.gene013630:CDS |
| ATTACATCACGGTATCTTTC+AGG | 0.229998 | 3.4:-83197334 | None:intergenic |
| AGAAGATTGACGAACTTCTA+AGG | 0.267064 | 3.4:+83195289 | MS.gene013630:CDS |
| CCGTTAACGGTAGCATTTAA+AGG | 0.276378 | 3.4:+83194817 | MS.gene013630:CDS |
| CCTTTAAATGCTACCGTTAA+CGG | 0.304115 | 3.4:-83194817 | None:intergenic |
| GAGACAGCTCTTGGTTTCTT+AGG | 0.309175 | 3.4:-83194946 | None:intergenic |
| TTGAGCCAAACCGGAGATTT+CGG | 0.320769 | 3.4:+83196630 | MS.gene013630:CDS |
| AATGAGCTTCTCACCTTCAT+TGG | 0.323733 | 3.4:-83195417 | None:intergenic |
| ATACTCAGTACCGGCTGATT+TGG | 0.341811 | 3.4:+83195314 | MS.gene013630:CDS |
| CTCATCAAGATTCATCCGTT+TGG | 0.343384 | 3.4:-83195187 | None:intergenic |
| GTAAATCATCTTTCACTTGA+AGG | 0.343761 | 3.4:-83195976 | None:intergenic |
| AGCTTCTCACGTGTTCCCTT+TGG | 0.354929 | 3.4:+83196713 | MS.gene013630:CDS |
| CCTAGAGATGTTCAAGTTTG+AGG | 0.363298 | 3.4:-83198487 | None:intergenic |
| TTTCAACCTACAGTCTGTTT+TGG | 0.364864 | 3.4:+83196654 | MS.gene013630:CDS |
| TCTATTATTTCTTCCTCTGT+TGG | 0.381083 | 3.4:-83197295 | None:intergenic |
| ATCCTGAAACCTTGGGCTAT+TGG | 0.383360 | 3.4:-83196561 | None:intergenic |
| TCCTCAGTGGAGACAGCTCT+TGG | 0.384406 | 3.4:-83194955 | None:intergenic |
| TTGGTGATCAGACAGAGATT+TGG | 0.394905 | 3.4:+83198426 | MS.gene013630:CDS |
| TGCTCCGAAGAAGGCAGAAC+TGG | 0.403451 | 3.4:-83195369 | None:intergenic |
| TGCAAGAAATAAACTAATAA+AGG | 0.403691 | 3.4:+83196096 | MS.gene013630:CDS |
| ACCTCCAGTTCTGCCTTCTT+CGG | 0.405115 | 3.4:+83195365 | MS.gene013630:CDS |
| GTTGATGATGGTGGTGTTGA+TGG | 0.408551 | 3.4:+83197430 | MS.gene013630:CDS |
| ATAATCTGCATCACATATAT+CGG | 0.410715 | 3.4:-83195058 | None:intergenic |
| AGACAGAGATTTGGACTTGA+TGG | 0.413383 | 3.4:+83198435 | MS.gene013630:CDS |
| AAGGTTTCAGGATCTTTGTC+AGG | 0.415554 | 3.4:+83196571 | MS.gene013630:CDS |
| CTTGAACATCTCTAGGGAAA+TGG | 0.415901 | 3.4:+83198494 | MS.gene013630:CDS |
| GGTAAAGGTGACCGAACTTT+GGG | 0.416654 | 3.4:+83198456 | MS.gene013630:CDS |
| CAGCCAAGACGCACAAGAAA+AGG | 0.419331 | 3.4:+83194902 | MS.gene013630:CDS |
| CCTCAAACTTGAACATCTCT+AGG | 0.422830 | 3.4:+83198487 | MS.gene013630:CDS |
| CCTGAAGCCTAAGGAAAACT+TGG | 0.432872 | 3.4:+83198407 | MS.gene013630:CDS |
| AATCTTCTCAATTCTACTCC+TGG | 0.438326 | 3.4:-83195274 | None:intergenic |
| TGACAAAGATCCTGAAACCT+TGG | 0.443746 | 3.4:-83196569 | None:intergenic |
| TTTCAGGATCTTTGTCAGGC+TGG | 0.454954 | 3.4:+83196575 | MS.gene013630:CDS |
| AGGCAATTTCTCCCAAAGTT+CGG | 0.456909 | 3.4:-83198467 | None:intergenic |
| GTGGTGTTGATGGCGATAAC+AGG | 0.460033 | 3.4:+83197440 | MS.gene013630:CDS |
| GAAAGCCGAAATCTCCGGTT+TGG | 0.463173 | 3.4:-83196635 | None:intergenic |
| GCTCAAGCATTCAGCTCGAT+TGG | 0.469057 | 3.4:+83198548 | MS.gene013630:CDS |
| TGGTAAAGGTGACCGAACTT+TGG | 0.469627 | 3.4:+83198455 | MS.gene013630:CDS |
| CGCAAGAAGAGTTTATCAAT+GGG | 0.471424 | 3.4:+83197404 | MS.gene013630:CDS |
| GTCTTGAATGCAGTGAAAGA+AGG | 0.472407 | 3.4:-83197372 | None:intergenic |
| ATCTTCTCAATTCTACTCCT+GGG | 0.478589 | 3.4:-83195273 | None:intergenic |
| ATAACTCAATCTTAGCTCTT+CGG | 0.481173 | 3.4:-83197252 | None:intergenic |
| TCAAGTAAAGAAAGCAATAG+AGG | 0.482166 | 3.4:+83196063 | MS.gene013630:CDS |
| CATCACATATATCGGTTGTC+GGG | 0.482870 | 3.4:-83195050 | None:intergenic |
| TTACATCACGGTATCTTTCA+GGG | 0.483805 | 3.4:-83197333 | None:intergenic |
| TGTATTGAAGAGACCGTTAA+CGG | 0.487228 | 3.4:+83194804 | MS.gene013630:CDS |
| CTGATTTGGTCAGTCTAGAC+TGG | 0.488397 | 3.4:+83195328 | MS.gene013630:CDS |
| GCATCACATATATCGGTTGT+CGG | 0.491957 | 3.4:-83195051 | None:intergenic |
| TAATCCACATCCAATGAAGA+TGG | 0.497477 | 3.4:-83194985 | None:intergenic |
| TCTCGAAGGGGTAAGAAGAT+TGG | 0.504636 | 3.4:+83195105 | MS.gene013630:CDS |
| ATCAATGGGGTCGTTGATGA+TGG | 0.504705 | 3.4:+83197418 | MS.gene013630:CDS |
| GGAGGCAACCTGCTCTACTA+AGG | 0.506636 | 3.4:+83197461 | MS.gene013630:CDS |
| AGAGCAAGCCTTAGTAGAGC+AGG | 0.510037 | 3.4:-83197469 | None:intergenic |
| GTTAACGGTCTCTTCAATAC+AGG | 0.512611 | 3.4:-83194802 | None:intergenic |
| GACAAAGATCCTGAAACCTT+GGG | 0.513367 | 3.4:-83196568 | None:intergenic |
| ACGCAAGAAGAGTTTATCAA+TGG | 0.515058 | 3.4:+83197403 | MS.gene013630:CDS |
| TGAGAAGCTTGCGAGGGTCA+TGG | 0.515197 | 3.4:-83196699 | None:intergenic |
| GATTGGTGATGTAAGTAAAG+AGG | 0.522341 | 3.4:+83195122 | MS.gene013630:CDS |
| CTGTTTCAAGCTCAGCTGCT+CGG | 0.525455 | 3.4:+83194740 | MS.gene013630:CDS |
| GAGGGTCATGGAACGGATGA+TGG | 0.526063 | 3.4:-83196687 | None:intergenic |
| GTAAAGAAAGCAATAGAGGT+TGG | 0.531566 | 3.4:+83196067 | MS.gene013630:CDS |
| TCTTGAATGCAGTGAAAGAA+GGG | 0.531724 | 3.4:-83197371 | None:intergenic |
| GAAGATTGACGAACTTCTAA+GGG | 0.538367 | 3.4:+83195290 | MS.gene013630:CDS |
| CATACTGATTCAAGTCCAAA+GGG | 0.539037 | 3.4:-83196728 | None:intergenic |
| AGATTTGGACTTGATGGTAA+AGG | 0.539589 | 3.4:+83198441 | MS.gene013630:CDS |
| CTCAAACTTGAACATCTCTA+GGG | 0.544621 | 3.4:+83198488 | MS.gene013630:CDS |
| AGTTATCATTTCAGCTTCAG+AGG | 0.545216 | 3.4:+83197269 | MS.gene013630:CDS |
| GCTTGATTCCCTGAAGCCTA+AGG | 0.546299 | 3.4:+83198398 | MS.gene013630:intron |
| ACCAGAAAACAAAAGCCAAA+CGG | 0.546934 | 3.4:+83195172 | MS.gene013630:CDS |
| CAAGTTGATGCAACCAATGA+AGG | 0.548325 | 3.4:+83195404 | MS.gene013630:CDS |
| TCAGCTATTTCATCCTCTGT+AGG | 0.552631 | 3.4:-83196019 | None:intergenic |
| AAGATACCGTGATGTAATGA+AGG | 0.553790 | 3.4:+83197339 | MS.gene013630:CDS |
| ACATACTGATTCAAGTCCAA+AGG | 0.563331 | 3.4:-83196729 | None:intergenic |
| CAGATTTCGCCAATAGCCCA+AGG | 0.566911 | 3.4:+83196552 | MS.gene013630:CDS |
| AGTGAAAGATGATTTACAGA+AGG | 0.573532 | 3.4:+83195982 | MS.gene013630:CDS |
| TCAGCTGCTCGGACTCCACT+AGG | 0.575229 | 3.4:+83194751 | MS.gene013630:CDS |
| GGTGAGAAAGCACGAAGTCA+AGG | 0.585592 | 3.4:+83198515 | MS.gene013630:CDS |
| GAACACGTGAGAAGCTTGCG+AGG | 0.589931 | 3.4:-83196706 | None:intergenic |
| GCTTCAGAGGTCACCAACAG+AGG | 0.593228 | 3.4:+83197282 | MS.gene013630:CDS |
| AGGTTGAAAGCCGAAATCTC+CGG | 0.593857 | 3.4:-83196640 | None:intergenic |
| GATCAAAAGAGTCTCTCGAA+GGG | 0.598531 | 3.4:+83195092 | MS.gene013630:CDS |
| AACTTTGTATTCAATCCTAG+TGG | 0.599283 | 3.4:-83194766 | None:intergenic |
| TCTAAGGGAATACTCAGTAC+CGG | 0.605704 | 3.4:+83195305 | MS.gene013630:CDS |
| AGCTTGCGAGGGTCATGGAA+CGG | 0.606319 | 3.4:-83196694 | None:intergenic |
| TTGATGCCTTCATTACATCA+CGG | 0.616848 | 3.4:-83197345 | None:intergenic |
| TACATCACGGTATCTTTCAG+GGG | 0.616885 | 3.4:-83197332 | None:intergenic |
| AACGGATGAATCTTGATGAG+AGG | 0.617893 | 3.4:+83195190 | MS.gene013630:CDS |
| ATTGATAAACTCTTCTTGCG+TGG | 0.621610 | 3.4:-83197401 | None:intergenic |
| GGATTTAAACAGTGATAGTG+TGG | 0.622803 | 3.4:+83195143 | MS.gene013630:CDS |
| AGATCAAAAGAGTCTCTCGA+AGG | 0.624213 | 3.4:+83195091 | MS.gene013630:CDS |
| AAGGCTTGCTCTTGATGATG+TGG | 0.625750 | 3.4:+83197480 | MS.gene013630:CDS |
| GTGAAGATGTCATTCCAACT+CGG | 0.626818 | 3.4:+83195238 | MS.gene013630:CDS |
| TAAACAGAATGACACAGCGT+TGG | 0.627600 | 3.4:+83194843 | MS.gene013630:CDS |
| TCCGAAGAAGGCAGAACTGG+AGG | 0.632944 | 3.4:-83195366 | None:intergenic |
| TCTTATCCAAAACAGACTGT+AGG | 0.634613 | 3.4:-83196660 | None:intergenic |
| TGATCACGAACAAGACAAGC+CGG | 0.636977 | 3.4:-83196517 | None:intergenic |
| CTTGAATGCAGTGAAAGAAG+GGG | 0.637171 | 3.4:-83197370 | None:intergenic |
| TCTAGACTGACCAAATCAGC+CGG | 0.641619 | 3.4:-83195324 | None:intergenic |
| AATGGGGTCGTTGATGATGG+TGG | 0.652007 | 3.4:+83197421 | MS.gene013630:CDS |
| ATCAAAAGAGTCTCTCGAAG+GGG | 0.655049 | 3.4:+83195093 | MS.gene013630:CDS |
| GTGTTGATGGCGATAACAGG+AGG | 0.658258 | 3.4:+83197443 | MS.gene013630:CDS |
| AACACGTGAGAAGCTTGCGA+GGG | 0.668557 | 3.4:-83196705 | None:intergenic |
| ACGGTCTCTTCAATACAGGA+TGG | 0.670415 | 3.4:-83194798 | None:intergenic |
| GCTAGAAAGAGAACCTACAG+AGG | 0.691814 | 3.4:+83196006 | MS.gene013630:CDS |
| ACCAAGAGCTGTCTCCACTG+AGG | 0.712371 | 3.4:+83194954 | MS.gene013630:CDS |
| GCAAGAAGAGTTTATCAATG+GGG | 0.735769 | 3.4:+83197405 | MS.gene013630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATCAATAATTAAGAAA+TGG | + | chr3.4:83196465-83196484 | MS.gene013630:intron | 10.0% |
| !! | CAATTTATTACAATACATAT+AGG | - | chr3.4:83196909-83196928 | None:intergenic | 15.0% |
| !! | TAAATTTGTGAAATATCAAT+AGG | + | chr3.4:83197654-83197673 | MS.gene013630:intron | 15.0% |
| !!! | AAAAATTTTGTGATATGTTT+TGG | - | chr3.4:83197942-83197961 | None:intergenic | 15.0% |
| !!! | AAAACATATCACAAAATTTT+TGG | + | chr3.4:83197941-83197960 | MS.gene013630:intron | 15.0% |
| !!! | AAACATATCACAAAATTTTT+GGG | + | chr3.4:83197942-83197961 | MS.gene013630:intron | 15.0% |
| !!! | TTTGTATATATTTTCAAGTA+TGG | - | chr3.4:83195025-83195044 | None:intergenic | 15.0% |
| !!! | TTTTTCATTTTGTTTAATGA+TGG | + | chr3.4:83195740-83195759 | MS.gene013630:intron | 15.0% |
| !! | AAAAAAAATGAATGACCATA+TGG | - | chr3.4:83195717-83195736 | None:intergenic | 20.0% |
| !! | AATACAATACTAGTATCAAA+CGG | - | chr3.4:83197530-83197549 | None:intergenic | 20.0% |
| !! | CTCATATTATTGATATTGTT+TGG | + | chr3.4:83196432-83196451 | MS.gene013630:intron | 20.0% |
| !! | GACTTTGTAATCTTTAAATT+TGG | + | chr3.4:83196404-83196423 | MS.gene013630:intron | 20.0% |
| !! | TAGGATATTCAAAGAAAATA+TGG | + | chr3.4:83197136-83197155 | MS.gene013630:intron | 20.0% |
| !! | TATCAATAATTAAGAAATGG+TGG | + | chr3.4:83196468-83196487 | MS.gene013630:intron | 20.0% |
| !! | TGCAAGAAATAAACTAATAA+AGG | + | chr3.4:83196096-83196115 | MS.gene013630:CDS | 20.0% |
| !! | TTCAATATATCATATTTCCA+TGG | + | chr3.4:83198325-83198344 | MS.gene013630:intron | 20.0% |
| !! | TTTATTACAATACATATAGG+TGG | - | chr3.4:83196906-83196925 | None:intergenic | 20.0% |
| !!! | AAGGTTCATAATTATTTCTT+TGG | + | chr3.4:83195578-83195597 | MS.gene013630:intron | 20.0% |
| !!! | AGCTATAATTGTTAATTTTC+AGG | + | chr3.4:83195949-83195968 | MS.gene013630:intron | 20.0% |
| !!! | ATATTTTCTTTGAATATCCT+AGG | - | chr3.4:83197137-83197156 | None:intergenic | 20.0% |
| ! | AAATCTAACATTAGTTGCAA+AGG | - | chr3.4:83198362-83198381 | None:intergenic | 25.0% |
| ! | AAGTTGAATTTACATGGTTA+TGG | + | chr3.4:83196351-83196370 | MS.gene013630:intron | 25.0% |
| ! | AATCTAACATTAGTTGCAAA+GGG | - | chr3.4:83198361-83198380 | None:intergenic | 25.0% |
| ! | ACTATACAAGATTTAATCCT+AGG | + | chr3.4:83197117-83197136 | MS.gene013630:intron | 25.0% |
| ! | AGTTGAATTTACATGGTTAT+GGG | + | chr3.4:83196352-83196371 | MS.gene013630:intron | 25.0% |
| ! | ATAATCTGCATCACATATAT+CGG | - | chr3.4:83195061-83195080 | None:intergenic | 25.0% |
| ! | ATCATGAAGTTGAATTTACA+TGG | + | chr3.4:83196345-83196364 | MS.gene013630:intron | 25.0% |
| ! | ATGAGCTTGATTGATTAATT+CGG | + | chr3.4:83197185-83197204 | MS.gene013630:intron | 25.0% |
| ! | ATGGCTTAATTAAAACCTAA+TGG | + | chr3.4:83195539-83195558 | MS.gene013630:intron | 25.0% |
| ! | CAATATCAATAATATGAGAG+AGG | - | chr3.4:83196430-83196449 | None:intergenic | 25.0% |
| ! | CGATAATATTTCCAATATAG+TGG | + | chr3.4:83195877-83195896 | MS.gene013630:intron | 25.0% |
| ! | TTATGAACAGTGTACATTAT+TGG | + | chr3.4:83197579-83197598 | MS.gene013630:intron | 25.0% |
| !! | ACTAAACATTGTTTCTCTTA+AGG | + | chr3.4:83197730-83197749 | MS.gene013630:intron | 25.0% |
| !! | ATGTTTGTAAACAGTTTTCT+CGG | - | chr3.4:83196837-83196856 | None:intergenic | 25.0% |
| !! | TATTTTCTTTGGCCAATAAT+TGG | + | chr3.4:83197090-83197109 | MS.gene013630:intron | 25.0% |
| !! | TCATCCAACAATATTTTCTT+TGG | + | chr3.4:83197079-83197098 | MS.gene013630:intron | 25.0% |
| !!! | AAGTGCAAACTACTTTTAAA+TGG | + | chr3.4:83198257-83198276 | MS.gene013630:intron | 25.0% |
| !!! | AATTTTGTGATATGTTTTGG+AGG | - | chr3.4:83197939-83197958 | None:intergenic | 25.0% |
| !!! | GTTTCTAAAATCGATTAAGA+TGG | + | chr3.4:83197824-83197843 | MS.gene013630:intron | 25.0% |
| !!! | TATGTTTTGAAGTTGGATTT+TGG | + | chr3.4:83197754-83197773 | MS.gene013630:intron | 25.0% |
| AAAACAATAATCAGCATGTG+TGG | - | chr3.4:83196765-83196784 | None:intergenic | 30.0% | |
| AACATCATTGACCACTATAT+TGG | - | chr3.4:83195891-83195910 | None:intergenic | 30.0% | |
| AACTTTGTATTCAATCCTAG+TGG | - | chr3.4:83194769-83194788 | None:intergenic | 30.0% | |
| ACTACTATTGCAGTGAATAT+CGG | - | chr3.4:83196305-83196324 | None:intergenic | 30.0% | |
| AGTGAAAGATGATTTACAGA+AGG | + | chr3.4:83195982-83196001 | MS.gene013630:CDS | 30.0% | |
| ATATAGTGGTCAATGATGTT+AGG | + | chr3.4:83195891-83195910 | MS.gene013630:intron | 30.0% | |
| ATCAGAAATTTCAACAGAAG+AGG | - | chr3.4:83196384-83196403 | None:intergenic | 30.0% | |
| ATCTAACATTAGTTGCAAAG+GGG | - | chr3.4:83198360-83198379 | None:intergenic | 30.0% | |
| CAAGAAAGCTTTCAACTTAA+TGG | + | chr3.4:83195520-83195539 | MS.gene013630:intron | 30.0% | |
| CATGATGAGACATAGTTTAT+AGG | + | chr3.4:83198208-83198227 | MS.gene013630:intron | 30.0% | |
| CATGCATATAATGAGAATGA+GGG | + | chr3.4:83195670-83195689 | MS.gene013630:intron | 30.0% | |
| CGGTATCATTAAATCCTATT+TGG | + | chr3.4:83198177-83198196 | MS.gene013630:intron | 30.0% | |
| CTATAAACTATGTCTCATCA+TGG | - | chr3.4:83198210-83198229 | None:intergenic | 30.0% | |
| CTATCTCATTCAAACTTCAA+TGG | + | chr3.4:83196265-83196284 | MS.gene013630:intron | 30.0% | |
| GAGTAAATTGAAAGAAAGTG+TGG | - | chr3.4:83195463-83195482 | None:intergenic | 30.0% | |
| GATGTAAAAATAACTGCAGT+AGG | + | chr3.4:83196863-83196882 | MS.gene013630:intron | 30.0% | |
| GTAAATCATCTTTCACTTGA+AGG | - | chr3.4:83195979-83195998 | None:intergenic | 30.0% | |
| TAAAACCTAATGGCTTAAGT+TGG | + | chr3.4:83195549-83195568 | MS.gene013630:intron | 30.0% | |
| TATGACTGAAATAGCCATTA+AGG | - | chr3.4:83198018-83198037 | None:intergenic | 30.0% | |
| TCAAGTAAAGAAAGCAATAG+AGG | + | chr3.4:83196063-83196082 | MS.gene013630:CDS | 30.0% | |
| TCATGCATATAATGAGAATG+AGG | + | chr3.4:83195669-83195688 | MS.gene013630:intron | 30.0% | |
| TGAGCTTGATTGATTAATTC+GGG | + | chr3.4:83197186-83197205 | MS.gene013630:intron | 30.0% | |
| TGTATAGTCCTACCAATTAT+TGG | - | chr3.4:83197105-83197124 | None:intergenic | 30.0% | |
| TTGGCCAAAGAAAATATTGT+TGG | - | chr3.4:83197086-83197105 | None:intergenic | 30.0% | |
| TTTGTTTAATGATGGCATGA+TGG | + | chr3.4:83195748-83195767 | MS.gene013630:intron | 30.0% | |
| ! | ATAACTCAATCTTAGCTCTT+CGG | - | chr3.4:83197255-83197274 | None:intergenic | 30.0% |
| ! | GGAAAATTTTCCATCTTCAT+TGG | + | chr3.4:83194975-83194994 | MS.gene013630:CDS | 30.0% |
| ! | TCTATTATTTCTTCCTCTGT+TGG | - | chr3.4:83197298-83197317 | None:intergenic | 30.0% |
| ! | TGTTCAATTCTTTTACAGCT+TGG | + | chr3.4:83196129-83196148 | MS.gene013630:intron | 30.0% |
| ! | TGTTTGTAAACAGTTTTCTC+GGG | - | chr3.4:83196836-83196855 | None:intergenic | 30.0% |
| !! | AAAGTCGATTTGTGATACTT+TGG | + | chr3.4:83196943-83196962 | MS.gene013630:intron | 30.0% |
| !! | AAGTCGATTTGTGATACTTT+GGG | + | chr3.4:83196944-83196963 | MS.gene013630:intron | 30.0% |
| !! | ATTTAAGGCGGAATTTTCAA+CGG | + | chr3.4:83198157-83198176 | MS.gene013630:intron | 30.0% |
| !! | CAAACTACTTTTAAATGGTG+CGG | + | chr3.4:83198262-83198281 | MS.gene013630:intron | 30.0% |
| !!! | GGTATCTTTTAATTTTGTGC+AGG | + | chr3.4:83197216-83197235 | MS.gene013630:intron | 30.0% |
| !!! | TTAAGGCTATGTTTTGAAGT+TGG | + | chr3.4:83197747-83197766 | MS.gene013630:intron | 30.0% |
| !!! | TTTTGAAGTTGGATTTTGGA+GGG | + | chr3.4:83197758-83197777 | MS.gene013630:intron | 30.0% |
| AAACTATGTCTCATCATGGT+AGG | - | chr3.4:83198206-83198225 | None:intergenic | 35.0% | |
| AACTATGTCTCATCATGGTA+GGG | - | chr3.4:83198205-83198224 | None:intergenic | 35.0% | |
| AAGATACCGTGATGTAATGA+AGG | + | chr3.4:83197339-83197358 | MS.gene013630:CDS | 35.0% | |
| AATCTTCTCAATTCTACTCC+TGG | - | chr3.4:83195277-83195296 | None:intergenic | 35.0% | |
| AATTCTTCGCTAGAAATAGC+AGG | + | chr3.4:83196970-83196989 | MS.gene013630:intron | 35.0% | |
| ACCAGAAAACAAAAGCCAAA+CGG | + | chr3.4:83195172-83195191 | MS.gene013630:CDS | 35.0% | |
| ACGAGTCTAGATACTCTATT+GGG | - | chr3.4:83196223-83196242 | None:intergenic | 35.0% | |
| ACGCAAGAAGAGTTTATCAA+TGG | + | chr3.4:83197403-83197422 | MS.gene013630:CDS | 35.0% | |
| AGAAGATTGACGAACTTCTA+AGG | + | chr3.4:83195289-83195308 | MS.gene013630:CDS | 35.0% | |
| AGTTATCATTTCAGCTTCAG+AGG | + | chr3.4:83197269-83197288 | MS.gene013630:CDS | 35.0% | |
| ATCTTCTCAATTCTACTCCT+GGG | - | chr3.4:83195276-83195295 | None:intergenic | 35.0% | |
| ATTACATCACGGTATCTTTC+AGG | - | chr3.4:83197337-83197356 | None:intergenic | 35.0% | |
| ATTCTTCGCTAGAAATAGCA+GGG | + | chr3.4:83196971-83196990 | MS.gene013630:intron | 35.0% | |
| ATTGATAAACTCTTCTTGCG+TGG | - | chr3.4:83197404-83197423 | None:intergenic | 35.0% | |
| CCTTTAAATGCTACCGTTAA+CGG | - | chr3.4:83194820-83194839 | None:intergenic | 35.0% | |
| CGCAAGAAGAGTTTATCAAT+GGG | + | chr3.4:83197404-83197423 | MS.gene013630:CDS | 35.0% | |
| CTCAAACTTGAACATCTCTA+GGG | + | chr3.4:83198488-83198507 | MS.gene013630:CDS | 35.0% | |
| CTGCTATTAAGGATTTAAGG+CGG | + | chr3.4:83198145-83198164 | MS.gene013630:intron | 35.0% | |
| GAAGATTGACGAACTTCTAA+GGG | + | chr3.4:83195290-83195309 | MS.gene013630:CDS | 35.0% | |
| GATGTTGGAGTATGCAATTA+AGG | + | chr3.4:83198083-83198102 | MS.gene013630:intron | 35.0% | |
| GCAAGAAGAGTTTATCAATG+GGG | + | chr3.4:83197405-83197424 | MS.gene013630:CDS | 35.0% | |
| GGACTGCTATTAAGGATTTA+AGG | + | chr3.4:83198142-83198161 | MS.gene013630:intron | 35.0% | |
| GTAAAGAAAGCAATAGAGGT+TGG | + | chr3.4:83196067-83196086 | MS.gene013630:CDS | 35.0% | |
| GTATCAAACGGAGACATAAA+AGG | - | chr3.4:83197518-83197537 | None:intergenic | 35.0% | |
| TAATCCACATCCAATGAAGA+TGG | - | chr3.4:83194988-83195007 | None:intergenic | 35.0% | |
| TACGAGTCTAGATACTCTAT+TGG | - | chr3.4:83196224-83196243 | None:intergenic | 35.0% | |
| TATCCTGAGCTGCTAAAATT+TGG | + | chr3.4:83197606-83197625 | MS.gene013630:intron | 35.0% | |
| TCTAACATTAGTTGCAAAGG+GGG | - | chr3.4:83198359-83198378 | None:intergenic | 35.0% | |
| TCTTATCCAAAACAGACTGT+AGG | - | chr3.4:83196663-83196682 | None:intergenic | 35.0% | |
| TCTTGAATGCAGTGAAAGAA+GGG | - | chr3.4:83197374-83197393 | None:intergenic | 35.0% | |
| TGTATTGAAGAGACCGTTAA+CGG | + | chr3.4:83194804-83194823 | MS.gene013630:CDS | 35.0% | |
| TTACATCACGGTATCTTTCA+GGG | - | chr3.4:83197336-83197355 | None:intergenic | 35.0% | |
| TTCTTTGGCCAATAATTGGT+AGG | + | chr3.4:83197094-83197113 | MS.gene013630:intron | 35.0% | |
| TTGATGCCTTCATTACATCA+CGG | - | chr3.4:83197348-83197367 | None:intergenic | 35.0% | |
| ! | ACTTTTAAATGGTGCGGTTT+AGG | + | chr3.4:83198268-83198287 | MS.gene013630:intron | 35.0% |
| ! | AGATGGAAAATTTTCCTCAG+TGG | - | chr3.4:83194971-83194990 | None:intergenic | 35.0% |
| ! | AGATTTGGACTTGATGGTAA+AGG | + | chr3.4:83198441-83198460 | MS.gene013630:CDS | 35.0% |
| ! | CAAACCTAACTTGTAAAGTG+AGG | + | chr3.4:83197982-83198001 | MS.gene013630:intron | 35.0% |
| ! | CAACATCGTCATTGTGTTTT+GGG | - | chr3.4:83198070-83198089 | None:intergenic | 35.0% |
| ! | GGATTTAAACAGTGATAGTG+TGG | + | chr3.4:83195143-83195162 | MS.gene013630:CDS | 35.0% |
| ! | TTTCAACCTACAGTCTGTTT+TGG | + | chr3.4:83196654-83196673 | MS.gene013630:CDS | 35.0% |
| ! | TTTTCCATCTTCATTGGATG+TGG | + | chr3.4:83194981-83195000 | MS.gene013630:CDS | 35.0% |
| !! | ACATACTGATTCAAGTCCAA+AGG | - | chr3.4:83196732-83196751 | None:intergenic | 35.0% |
| !! | ATCACAAAATTTTTGGGCTC+AGG | + | chr3.4:83197948-83197967 | MS.gene013630:intron | 35.0% |
| !! | CATACTGATTCAAGTCCAAA+GGG | - | chr3.4:83196731-83196750 | None:intergenic | 35.0% |
| !! | GATTGGTGATGTAAGTAAAG+AGG | + | chr3.4:83195122-83195141 | MS.gene013630:CDS | 35.0% |
| !! | TAACCAAATTTTAGCAGCTC+AGG | - | chr3.4:83197612-83197631 | None:intergenic | 35.0% |
| !!! | GGATTTCTTTTTTTCCGAGT+TGG | - | chr3.4:83195255-83195274 | None:intergenic | 35.0% |
| !!! | GTTTTGAAGTTGGATTTTGG+AGG | + | chr3.4:83197757-83197776 | MS.gene013630:intron | 35.0% |
| !!! | TGGCTTTTGTTTTCTGGTTT+CGG | - | chr3.4:83195170-83195189 | None:intergenic | 35.0% |
| AAAAATGCATGCTCCGAAGA+AGG | - | chr3.4:83195381-83195400 | None:intergenic | 40.0% | |
| AACGGATGAATCTTGATGAG+AGG | + | chr3.4:83195190-83195209 | MS.gene013630:CDS | 40.0% | |
| AAGGTTTCAGGATCTTTGTC+AGG | + | chr3.4:83196571-83196590 | MS.gene013630:CDS | 40.0% | |
| AATGAGCTTCTCACCTTCAT+TGG | - | chr3.4:83195420-83195439 | None:intergenic | 40.0% | |
| ACTTGCCAACTTAAGCCATT+AGG | - | chr3.4:83195557-83195576 | None:intergenic | 40.0% | |
| AGACAGAGATTTGGACTTGA+TGG | + | chr3.4:83198435-83198454 | MS.gene013630:CDS | 40.0% | |
| AGATCAAAAGAGTCTCTCGA+AGG | + | chr3.4:83195091-83195110 | MS.gene013630:CDS | 40.0% | |
| AGGCAATTTCTCCCAAAGTT+CGG | - | chr3.4:83198470-83198489 | None:intergenic | 40.0% | |
| AGTCTAGATACTCTATTGGG+AGG | - | chr3.4:83196220-83196239 | None:intergenic | 40.0% | |
| ATCAAAAGAGTCTCTCGAAG+GGG | + | chr3.4:83195093-83195112 | MS.gene013630:CDS | 40.0% | |
| ATGACCATATGGTCAAGATG+TGG | - | chr3.4:83195706-83195725 | None:intergenic | 40.0% | |
| ATGCAATTAAGGCGGTCTAA+AGG | + | chr3.4:83198094-83198113 | MS.gene013630:intron | 40.0% | |
| CCAAAACACAATGACGATGT+TGG | + | chr3.4:83198068-83198087 | MS.gene013630:intron | 40.0% | |
| CCGTTAACGGTAGCATTTAA+AGG | + | chr3.4:83194817-83194836 | MS.gene013630:CDS | 40.0% | |
| CCTCAAACTTGAACATCTCT+AGG | + | chr3.4:83198487-83198506 | MS.gene013630:CDS | 40.0% | |
| CTCATCAAGATTCATCCGTT+TGG | - | chr3.4:83195190-83195209 | None:intergenic | 40.0% | |
| CTCGGAAAAAAAGAAATCCC+AGG | + | chr3.4:83195256-83195275 | MS.gene013630:CDS | 40.0% | |
| CTTGAATGCAGTGAAAGAAG+GGG | - | chr3.4:83197373-83197392 | None:intergenic | 40.0% | |
| CTTGATGAGCAAGGAATTCA+AGG | + | chr3.4:83195839-83195858 | MS.gene013630:intron | 40.0% | |
| GAATCCACATCTTGACCATA+TGG | + | chr3.4:83195699-83195718 | MS.gene013630:intron | 40.0% | |
| GACAAAGATCCTGAAACCTT+GGG | - | chr3.4:83196571-83196590 | None:intergenic | 40.0% | |
| GAGGACTCTTGAAACCTTAA+TGG | + | chr3.4:83198001-83198020 | MS.gene013630:intron | 40.0% | |
| GAGTCCTCACTTTACAAGTT+AGG | - | chr3.4:83197989-83198008 | None:intergenic | 40.0% | |
| GATCAAAAGAGTCTCTCGAA+GGG | + | chr3.4:83195092-83195111 | MS.gene013630:CDS | 40.0% | |
| GCAATTGTGACCCAATCATT+AGG | + | chr3.4:83198230-83198249 | MS.gene013630:intron | 40.0% | |
| GTCTAGATACTCTATTGGGA+GGG | - | chr3.4:83196219-83196238 | None:intergenic | 40.0% | |
| GTCTTGAATGCAGTGAAAGA+AGG | - | chr3.4:83197375-83197394 | None:intergenic | 40.0% | |
| GTGAAGATGTCATTCCAACT+CGG | + | chr3.4:83195238-83195257 | MS.gene013630:CDS | 40.0% | |
| GTTAACGGTCTCTTCAATAC+AGG | - | chr3.4:83194805-83194824 | None:intergenic | 40.0% | |
| GTTGGAGTATGCAATTAAGG+CGG | + | chr3.4:83198086-83198105 | MS.gene013630:intron | 40.0% | |
| TAAACAGAATGACACAGCGT+TGG | + | chr3.4:83194843-83194862 | MS.gene013630:CDS | 40.0% | |
| TACATCACGGTATCTTTCAG+GGG | - | chr3.4:83197335-83197354 | None:intergenic | 40.0% | |
| TCTAAGGGAATACTCAGTAC+CGG | + | chr3.4:83195305-83195324 | MS.gene013630:CDS | 40.0% | |
| TGACAAAGATCCTGAAACCT+TGG | - | chr3.4:83196572-83196591 | None:intergenic | 40.0% | |
| TTGATTAATTCGGGTGTGTC+TGG | + | chr3.4:83197195-83197214 | MS.gene013630:intron | 40.0% | |
| ! | AGAGTATCTAGACTCGTAGT+TGG | + | chr3.4:83196226-83196245 | MS.gene013630:intron | 40.0% |
| ! | ATCTTTTGCAGCACAATCTC+CGG | + | chr3.4:83196498-83196517 | MS.gene013630:intron | 40.0% |
| ! | CAAGTTTTCCTTAGGCTTCA+GGG | - | chr3.4:83198409-83198428 | None:intergenic | 40.0% |
| ! | CATCACATATATCGGTTGTC+GGG | - | chr3.4:83195053-83195072 | None:intergenic | 40.0% |
| ! | CCAACATCGTCATTGTGTTT+TGG | - | chr3.4:83198071-83198090 | None:intergenic | 40.0% |
| ! | CCTAGAGATGTTCAAGTTTG+AGG | - | chr3.4:83198490-83198509 | None:intergenic | 40.0% |
| ! | CCTATAGGTTGACATGTTTG+CGG | - | chr3.4:83197910-83197929 | None:intergenic | 40.0% |
| ! | CTGATCACCAAGTTTTCCTT+AGG | - | chr3.4:83198417-83198436 | None:intergenic | 40.0% |
| ! | CTTGAACATCTCTAGGGAAA+TGG | + | chr3.4:83198494-83198513 | MS.gene013630:CDS | 40.0% |
| ! | GCATCACATATATCGGTTGT+CGG | - | chr3.4:83195054-83195073 | None:intergenic | 40.0% |
| ! | GCTATTTCAGTCATATCTCG+AGG | + | chr3.4:83198023-83198042 | MS.gene013630:intron | 40.0% |
| ! | GGACTAATTGTGAGGGTTTT+AGG | - | chr3.4:83195808-83195827 | None:intergenic | 40.0% |
| ! | TATCCTTTTCTTGTGCGTCT+TGG | - | chr3.4:83194908-83194927 | None:intergenic | 40.0% |
| ! | TCAGCTATTTCATCCTCTGT+AGG | - | chr3.4:83196022-83196041 | None:intergenic | 40.0% |
| ! | TTGGTGATCAGACAGAGATT+TGG | + | chr3.4:83198426-83198445 | MS.gene013630:CDS | 40.0% |
| !! | CAAGTTGATGCAACCAATGA+AGG | + | chr3.4:83195404-83195423 | MS.gene013630:CDS | 40.0% |
| !! | TAGGAGTGGACTAATTGTGA+GGG | - | chr3.4:83195815-83195834 | None:intergenic | 40.0% |
| !! | TGCTCTTGATGATGTGGTAA+TGG | + | chr3.4:83197486-83197505 | MS.gene013630:intron | 40.0% |
| !! | TTGATCGTTTTGAGCCAAAC+CGG | + | chr3.4:83196621-83196640 | MS.gene013630:CDS | 40.0% |
| !! | TTTTGGAGGAACAAGCCTAT+AGG | - | chr3.4:83197925-83197944 | None:intergenic | 40.0% |
| !!! | CTTTGGTTTTATTCCCTCTG+AGG | + | chr3.4:83195595-83195614 | MS.gene013630:intron | 40.0% |
| !!! | TCCGTTTGGCTTTTGTTTTC+TGG | - | chr3.4:83195176-83195195 | None:intergenic | 40.0% |
| !!! | TGTGAGGGTTTTAGGTTTTC+AGG | - | chr3.4:83195800-83195819 | None:intergenic | 40.0% |
| !!! | TTGGCTGTTTTAACTTGCGT+AGG | - | chr3.4:83194889-83194908 | None:intergenic | 40.0% |
| AATGATGGCATGATGGCACT+TGG | + | chr3.4:83195755-83195774 | MS.gene013630:intron | 45.0% | |
| ACGGTCTCTTCAATACAGGA+TGG | - | chr3.4:83194801-83194820 | None:intergenic | 45.0% | |
| AGGTTGAAAGCCGAAATCTC+CGG | - | chr3.4:83196643-83196662 | None:intergenic | 45.0% | |
| ATCCTGAAACCTTGGGCTAT+TGG | - | chr3.4:83196564-83196583 | None:intergenic | 45.0% | |
| CCGCAAACATGTCAACCTAT+AGG | + | chr3.4:83197907-83197926 | MS.gene013630:intron | 45.0% | |
| CCTGAAGCCTAAGGAAAACT+TGG | + | chr3.4:83198407-83198426 | MS.gene013630:CDS | 45.0% | |
| CGGTCTAAAGGCCACAATTA+AGG | + | chr3.4:83198106-83198125 | MS.gene013630:intron | 45.0% | |
| CTTTGTCAGGCTGGAGTTAA+AGG | + | chr3.4:83196584-83196603 | MS.gene013630:CDS | 45.0% | |
| GAGACAGCTCTTGGTTTCTT+AGG | - | chr3.4:83194949-83194968 | None:intergenic | 45.0% | |
| GATACTCTATTGGGAGGGTA+CGG | - | chr3.4:83196214-83196233 | None:intergenic | 45.0% | |
| GCACTTCGCACCTAATGATT+GGG | - | chr3.4:83198243-83198262 | None:intergenic | 45.0% | |
| GCTAGAAAGAGAACCTACAG+AGG | + | chr3.4:83196006-83196025 | MS.gene013630:CDS | 45.0% | |
| GGTAAAGGTGACCGAACTTT+GGG | + | chr3.4:83198456-83198475 | MS.gene013630:CDS | 45.0% | |
| GTGAAGGACGAATCAAGCAA+AGG | + | chr3.4:83195625-83195644 | MS.gene013630:intron | 45.0% | |
| TCAGTCTCAGCTACTCGATA+GGG | + | chr3.4:83197040-83197059 | MS.gene013630:intron | 45.0% | |
| TCATATCTCGAGGCAATGTG+AGG | + | chr3.4:83198033-83198052 | MS.gene013630:intron | 45.0% | |
| TCCTAGAGACTTGATGAGCA+AGG | + | chr3.4:83195830-83195849 | MS.gene013630:intron | 45.0% | |
| TCCTTGCTCATCAAGTCTCT+AGG | - | chr3.4:83195834-83195853 | None:intergenic | 45.0% | |
| TCTAGACTGACCAAATCAGC+CGG | - | chr3.4:83195327-83195346 | None:intergenic | 45.0% | |
| TCTCGAAGGGGTAAGAAGAT+TGG | + | chr3.4:83195105-83195124 | MS.gene013630:CDS | 45.0% | |
| TGATCACGAACAAGACAAGC+CGG | - | chr3.4:83196520-83196539 | None:intergenic | 45.0% | |
| TGCACTTCGCACCTAATGAT+TGG | - | chr3.4:83198244-83198263 | None:intergenic | 45.0% | |
| TGGTAAAGGTGACCGAACTT+TGG | + | chr3.4:83198455-83198474 | MS.gene013630:CDS | 45.0% | |
| TTCAGTCTCAGCTACTCGAT+AGG | + | chr3.4:83197039-83197058 | MS.gene013630:intron | 45.0% | |
| TTGAGCCAAACCGGAGATTT+CGG | + | chr3.4:83196630-83196649 | MS.gene013630:CDS | 45.0% | |
| TTTCAGGATCTTTGTCAGGC+TGG | + | chr3.4:83196575-83196594 | MS.gene013630:CDS | 45.0% | |
| ! | ATCAATGGGGTCGTTGATGA+TGG | + | chr3.4:83197418-83197437 | MS.gene013630:CDS | 45.0% |
| ! | ATCATGGTAGGGCACCAAAT+AGG | - | chr3.4:83198194-83198213 | None:intergenic | 45.0% |
| ! | CCAAGTTTTCCTTAGGCTTC+AGG | - | chr3.4:83198410-83198429 | None:intergenic | 45.0% |
| !! | AAGGCTTGCTCTTGATGATG+TGG | + | chr3.4:83197480-83197499 | MS.gene013630:CDS | 45.0% |
| !! | ATACTCAGTACCGGCTGATT+TGG | + | chr3.4:83195314-83195333 | MS.gene013630:CDS | 45.0% |
| !! | CTAGGAGTGGACTAATTGTG+AGG | - | chr3.4:83195816-83195835 | None:intergenic | 45.0% |
| !! | CTGATTTGGTCAGTCTAGAC+TGG | + | chr3.4:83195328-83195347 | MS.gene013630:CDS | 45.0% |
| !! | GATTTTGGAGGGAAAGAGAG+GGG | + | chr3.4:83197769-83197788 | MS.gene013630:intron | 45.0% |
| !! | GGATTTTGGAGGGAAAGAGA+GGG | + | chr3.4:83197768-83197787 | MS.gene013630:intron | 45.0% |
| !! | GTTGATGATGGTGGTGTTGA+TGG | + | chr3.4:83197430-83197449 | MS.gene013630:CDS | 45.0% |
| !! | TCGTCATTGTGTTTTGGGTG+TGG | - | chr3.4:83198065-83198084 | None:intergenic | 45.0% |
| !! | TGGATTTTGGAGGGAAAGAG+AGG | + | chr3.4:83197767-83197786 | MS.gene013630:intron | 45.0% |
| !! | TGGCTTAAGTTGGCAAGTCA+AGG | + | chr3.4:83195559-83195578 | MS.gene013630:intron | 45.0% |
| !!! | GAGGGTTTTAGGTTTTCAGG+AGG | - | chr3.4:83195797-83195816 | None:intergenic | 45.0% |
| AACACGTGAGAAGCTTGCGA+GGG | - | chr3.4:83196708-83196727 | None:intergenic | 50.0% | |
| AATTAAGGCTGCTTGGGGTG+TGG | + | chr3.4:83198121-83198140 | MS.gene013630:intron | 50.0% | |
| ACCCCAAGCAGCCTTAATTG+TGG | - | chr3.4:83198120-83198139 | None:intergenic | 50.0% | |
| ACCTCCAGTTCTGCCTTCTT+CGG | + | chr3.4:83195365-83195384 | MS.gene013630:CDS | 50.0% | |
| ACTCGTAGTTGGCGAATTCG+TGG | + | chr3.4:83196237-83196256 | MS.gene013630:intron | 50.0% | |
| AGAGCAAGCCTTAGTAGAGC+AGG | - | chr3.4:83197472-83197491 | None:intergenic | 50.0% | |
| AGCTTCTCACGTGTTCCCTT+TGG | + | chr3.4:83196713-83196732 | MS.gene013630:CDS | 50.0% | |
| AGGCCACAATTAAGGCTGCT+TGG | + | chr3.4:83198114-83198133 | MS.gene013630:intron | 50.0% | |
| CAAAGGGGGACAAATGACCA+TGG | - | chr3.4:83198345-83198364 | None:intergenic | 50.0% | |
| CAGATTTCGCCAATAGCCCA+AGG | + | chr3.4:83196552-83196571 | MS.gene013630:CDS | 50.0% | |
| CAGCCAAGACGCACAAGAAA+AGG | + | chr3.4:83194902-83194921 | MS.gene013630:CDS | 50.0% | |
| CGAGTAGCTGAGACTGAAAG+TGG | - | chr3.4:83197037-83197056 | None:intergenic | 50.0% | |
| CTCGTAGTTGGCGAATTCGT+GGG | + | chr3.4:83196238-83196257 | MS.gene013630:intron | 50.0% | |
| CTGTTTCAAGCTCAGCTGCT+CGG | + | chr3.4:83194740-83194759 | MS.gene013630:CDS | 50.0% | |
| CTTCACGTTCAGACCTCAGA+GGG | - | chr3.4:83195611-83195630 | None:intergenic | 50.0% | |
| GAAAGCCGAAATCTCCGGTT+TGG | - | chr3.4:83196638-83196657 | None:intergenic | 50.0% | |
| GCCACAATTAAGGCTGCTTG+GGG | + | chr3.4:83198116-83198135 | MS.gene013630:intron | 50.0% | |
| GCTCAAGCATTCAGCTCGAT+TGG | + | chr3.4:83198548-83198567 | MS.gene013630:CDS | 50.0% | |
| GCTTGATTCCCTGAAGCCTA+AGG | + | chr3.4:83198398-83198417 | MS.gene013630:intron | 50.0% | |
| GGCCACAATTAAGGCTGCTT+GGG | + | chr3.4:83198115-83198134 | MS.gene013630:intron | 50.0% | |
| ! | GCTCATCAAGTCTCTAGGAG+TGG | - | chr3.4:83195829-83195848 | None:intergenic | 50.0% |
| ! | GGTGAGAAAGCACGAAGTCA+AGG | + | chr3.4:83198515-83198534 | MS.gene013630:CDS | 50.0% |
| ! | TGGGGTGTGGACTGCTATTA+AGG | + | chr3.4:83198134-83198153 | MS.gene013630:intron | 50.0% |
| !! | AATGGGGTCGTTGATGATGG+TGG | + | chr3.4:83197421-83197440 | MS.gene013630:CDS | 50.0% |
| !! | GTGGTGTTGATGGCGATAAC+AGG | + | chr3.4:83197440-83197459 | MS.gene013630:CDS | 50.0% |
| !! | GTGTTGATGGCGATAACAGG+AGG | + | chr3.4:83197443-83197462 | MS.gene013630:CDS | 50.0% |
| ACCAAGAGCTGTCTCCACTG+AGG | + | chr3.4:83194954-83194973 | MS.gene013630:CDS | 55.0% | |
| AGCTTGCGAGGGTCATGGAA+CGG | - | chr3.4:83196697-83196716 | None:intergenic | 55.0% | |
| CCTTCACGTTCAGACCTCAG+AGG | - | chr3.4:83195612-83195631 | None:intergenic | 55.0% | |
| CGCCAATAGCCCAAGGTTTC+AGG | + | chr3.4:83196559-83196578 | MS.gene013630:CDS | 55.0% | |
| GAACACGTGAGAAGCTTGCG+AGG | - | chr3.4:83196709-83196728 | None:intergenic | 55.0% | |
| GAGGGTCATGGAACGGATGA+TGG | - | chr3.4:83196690-83196709 | None:intergenic | 55.0% | |
| GCTTCAGAGGTCACCAACAG+AGG | + | chr3.4:83197282-83197301 | MS.gene013630:CDS | 55.0% | |
| GGAGGCAACCTGCTCTACTA+AGG | + | chr3.4:83197461-83197480 | MS.gene013630:CDS | 55.0% | |
| TCCGAAGAAGGCAGAACTGG+AGG | - | chr3.4:83195369-83195388 | None:intergenic | 55.0% | |
| TCCTCAGTGGAGACAGCTCT+TGG | - | chr3.4:83194958-83194977 | None:intergenic | 55.0% | |
| TGAGAAGCTTGCGAGGGTCA+TGG | - | chr3.4:83196702-83196721 | None:intergenic | 55.0% | |
| TGCTCCGAAGAAGGCAGAAC+TGG | - | chr3.4:83195372-83195391 | None:intergenic | 55.0% | |
| ! | TCTATTGGGAGGGTACGGAC+AGG | - | chr3.4:83196209-83196228 | None:intergenic | 55.0% |
| !! | CCTCTGAGGTCTGAACGTGA+AGG | + | chr3.4:83195609-83195628 | MS.gene013630:intron | 55.0% |
| TCAGCTGCTCGGACTCCACT+AGG | + | chr3.4:83194751-83194770 | MS.gene013630:CDS | 60.0% | |
| ! | TTGGGAGGGTACGGACAGGA+TGG | - | chr3.4:83196205-83196224 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 83194727 | 83198596 | 83194727 | ID=MS.gene013630 |
| chr3.4 | mRNA | 83194727 | 83198596 | 83194727 | ID=MS.gene013630.t1;Parent=MS.gene013630 |
| chr3.4 | exon | 83194727 | 83195425 | 83194727 | ID=MS.gene013630.t1.exon1;Parent=MS.gene013630.t1 |
| chr3.4 | CDS | 83194727 | 83195425 | 83194727 | ID=cds.MS.gene013630.t1;Parent=MS.gene013630.t1 |
| chr3.4 | exon | 83195971 | 83196117 | 83195971 | ID=MS.gene013630.t1.exon2;Parent=MS.gene013630.t1 |
| chr3.4 | CDS | 83195971 | 83196117 | 83195971 | ID=cds.MS.gene013630.t1;Parent=MS.gene013630.t1 |
| chr3.4 | exon | 83196509 | 83196745 | 83196509 | ID=MS.gene013630.t1.exon3;Parent=MS.gene013630.t1 |
| chr3.4 | CDS | 83196509 | 83196745 | 83196509 | ID=cds.MS.gene013630.t1;Parent=MS.gene013630.t1 |
| chr3.4 | exon | 83197238 | 83197501 | 83197238 | ID=MS.gene013630.t1.exon4;Parent=MS.gene013630.t1 |
| chr3.4 | CDS | 83197238 | 83197501 | 83197238 | ID=cds.MS.gene013630.t1;Parent=MS.gene013630.t1 |
| chr3.4 | exon | 83198399 | 83198596 | 83198399 | ID=MS.gene013630.t1.exon5;Parent=MS.gene013630.t1 |
| chr3.4 | CDS | 83198399 | 83198596 | 83198399 | ID=cds.MS.gene013630.t1;Parent=MS.gene013630.t1 |
| Gene Sequence |
| Protein sequence |
