AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013665

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013665.t1 MTR_3g090130 92.827 474 25 2 1 474 1 465 0.0 907
MS.gene013665.t1 MTR_5g072570 80.297 472 89 1 1 472 1 468 0.0 805
MS.gene013665.t1 MTR_3g090150 79.536 474 91 3 1 472 1 470 0.0 788
MS.gene013665.t1 MTR_7g021130 46.774 434 222 6 34 465 31 457 5.24e-141 412
MS.gene013665.t1 MTR_3g434850 45.175 456 238 6 12 465 9 454 2.22e-140 411
MS.gene013665.t1 MTR_8g099930 46.804 438 226 5 32 467 32 464 4.05e-140 410
MS.gene013665.t1 MTR_3g498755 45.890 438 228 6 32 465 13 445 7.73e-140 409
MS.gene013665.t1 MTR_2g449850 45.183 436 226 6 35 467 39 464 2.53e-130 385
MS.gene013665.t1 MTR_3g079590 47.235 434 206 9 30 461 74 486 3.97e-125 373
MS.gene013665.t1 MTR_3g079570 46.697 439 208 10 30 465 75 490 3.91e-123 368
MS.gene013665.t1 MTR_7g013790 42.072 473 253 7 6 469 8 468 1.02e-121 363
MS.gene013665.t1 MTR_3g079560 46.309 447 211 11 26 467 70 492 8.21e-121 362
MS.gene013665.t1 MTR_1g040370 42.342 444 205 7 24 465 21 415 6.15e-120 357
MS.gene013665.t1 MTR_3g034290 42.472 445 238 6 26 469 67 494 7.20e-120 360
MS.gene013665.t1 MTR_3g079600 44.766 449 225 11 26 471 68 496 5.10e-119 358
MS.gene013665.t1 MTR_4g075150 41.895 475 250 11 1 465 3 461 1.08e-117 353
MS.gene013665.t1 MTR_4g089155 42.478 452 238 8 27 467 47 487 1.43e-117 353
MS.gene013665.t1 MTR_4g075150 41.895 475 252 11 1 465 3 463 1.63e-117 353
MS.gene013665.t1 MTR_0003s0560 42.857 441 232 7 26 465 66 487 3.41e-117 353
MS.gene013665.t1 MTR_3g079620 44.053 454 217 12 30 471 74 502 4.47e-117 353
MS.gene013665.t1 MTR_1g095560 41.350 474 257 9 1 468 1 459 8.07e-116 348
MS.gene013665.t1 MTR_2g012860 42.731 454 238 9 22 466 34 474 5.01e-115 347
MS.gene013665.t1 MTR_1g021010 44.622 437 213 11 34 466 76 487 9.03e-114 344
MS.gene013665.t1 MTR_3g079630 44.079 456 215 12 30 471 74 503 9.35e-114 344
MS.gene013665.t1 MTR_2g012850 41.480 446 241 7 31 467 33 467 2.18e-113 342
MS.gene013665.t1 MTR_1g021020 44.647 439 213 11 32 466 76 488 1.02e-111 339
MS.gene013665.t1 MTR_1g020090 44.218 441 210 11 31 465 87 497 4.02e-111 338
MS.gene013665.t1 MTR_2g062990 40.972 432 240 8 37 465 43 462 4.35e-110 334
MS.gene013665.t1 MTR_2g063000 40.323 434 242 8 37 465 42 463 2.15e-109 332
MS.gene013665.t1 MTR_2g081620 39.863 439 249 8 37 472 44 470 2.81e-109 332
MS.gene013665.t1 MTR_1g095560 38.735 506 257 10 1 468 1 491 4.90e-109 332
MS.gene013665.t1 MTR_4g122950 38.983 472 248 11 21 469 27 481 1.67e-108 330
MS.gene013665.t1 MTR_1g095540 40.851 470 253 11 6 467 6 458 3.01e-107 326
MS.gene013665.t1 MTR_2g062980 39.954 433 243 9 37 465 43 462 1.19e-106 325
MS.gene013665.t1 MTR_4g122960 39.744 468 248 11 20 468 26 478 4.98e-106 324
MS.gene013665.t1 MTR_1g102130 40.181 443 225 10 32 470 90 496 2.06e-100 310
MS.gene013665.t1 MTR_3g034290 42.254 355 191 5 26 379 67 408 1.74e-94 292
MS.gene013665.t1 MTR_2g063000 35.731 431 235 8 37 465 42 432 1.39e-87 275
MS.gene013665.t1 MTR_0003s0560 46.992 266 132 4 26 290 66 323 9.81e-80 252
MS.gene013665.t1 MTR_7g051430 32.186 494 270 13 18 461 14 492 3.32e-73 239
MS.gene013665.t1 MTR_8g011350 31.677 483 270 12 29 464 26 495 2.08e-71 234
MS.gene013665.t1 MTR_7g080180 30.769 507 287 14 10 464 4 498 2.41e-71 234
MS.gene013665.t1 MTR_0075s0010 33.504 391 184 9 30 413 4 325 6.96e-63 207
MS.gene013665.t1 MTR_8g011350 31.140 456 254 12 29 437 26 468 9.06e-63 211
MS.gene013665.t1 MTR_7g080180 29.677 465 263 14 10 422 4 456 4.38e-58 199
MS.gene013665.t1 MTR_2g018630 29.754 447 282 13 33 464 36 465 1.42e-51 181
MS.gene013665.t1 MTR_7g051430 37.413 286 165 7 18 297 14 291 3.31e-51 179
MS.gene013665.t1 MTR_2g018600 28.571 455 284 14 33 464 33 469 4.02e-50 177
MS.gene013665.t1 MTR_4g021490 28.959 442 282 14 34 459 40 465 8.01e-50 177
MS.gene013665.t1 MTR_4g021510 30.112 445 273 15 34 459 39 464 7.96e-49 174
MS.gene013665.t1 MTR_4g021520 28.859 447 276 16 34 459 40 465 2.54e-48 172
MS.gene013665.t1 MTR_2g018590 28.419 468 299 15 18 464 17 469 5.38e-48 172
MS.gene013665.t1 MTR_4g021535 28.392 479 291 19 4 459 12 461 7.51e-48 171
MS.gene013665.t1 MTR_4g021530 27.069 447 284 16 34 459 40 465 2.48e-46 167
MS.gene013665.t1 MTR_1g050545 29.673 428 262 11 45 461 81 480 6.50e-45 164
MS.gene013665.t1 MTR_4g021500 27.828 442 285 15 34 458 40 464 1.13e-44 167
MS.gene013665.t1 MTR_4g021500 27.945 433 267 16 40 459 482 882 1.74e-40 155
MS.gene013665.t1 MTR_4g021500 27.828 442 285 15 34 458 40 464 1.14e-44 167
MS.gene013665.t1 MTR_4g021500 28.345 441 273 15 40 459 482 900 1.02e-41 159
MS.gene013665.t1 MTR_4g057585 28.372 430 277 13 39 461 87 492 4.56e-43 159
MS.gene013665.t1 MTR_3g100420 27.948 458 292 14 32 464 52 496 2.21e-42 157
MS.gene013665.t1 MTR_4g057595 28.504 421 271 12 47 461 97 493 3.85e-42 156
MS.gene013665.t1 MTR_2g095750 26.773 437 271 11 44 464 97 500 3.79e-41 154
MS.gene013665.t1 MTR_4g057570 28.074 431 270 13 45 462 87 490 2.38e-40 151
MS.gene013665.t1 MTR_1g094155 28.700 446 268 11 26 461 81 486 4.53e-40 151
MS.gene013665.t1 MTR_2g095730 26.304 441 289 11 27 462 86 495 5.85e-39 148
MS.gene013665.t1 MTR_4g021520 28.293 410 252 16 34 422 40 428 2.06e-37 142
MS.gene013665.t1 MTR_4g057600 26.241 423 284 10 45 462 93 492 5.35e-37 142
MS.gene013665.t1 MTR_3g045770 24.826 431 303 10 33 454 26 444 7.96e-37 141
MS.gene013665.t1 MTR_4g021535 26.160 474 253 19 9 459 15 414 5.38e-35 135
MS.gene013665.t1 MTR_4g084710 25.499 451 287 15 41 474 37 455 3.10e-34 134
MS.gene013665.t1 MTR_2g018630 28.291 357 231 10 117 464 20 360 3.74e-34 132
MS.gene013665.t1 MTR_5g097180 26.464 427 271 15 49 464 43 437 5.06e-34 133
MS.gene013665.t1 MTR_2g009200 25.386 453 271 17 32 460 26 435 1.91e-31 125
MS.gene013665.t1 MTR_8g007520 78.571 70 15 0 350 419 111 180 5.67e-30 115
MS.gene013665.t1 MTR_2g095710 25.057 439 277 14 38 464 85 483 3.07e-25 108
MS.gene013665.t1 MTR_4g056520 23.571 420 277 12 65 460 55 454 1.22e-22 100
MS.gene013665.t1 MTR_1g051175 50.588 85 39 2 41 124 20 102 5.78e-19 87.4
MS.gene013665.t1 MTR_7g100560 27.488 211 87 3 40 250 65 209 4.23e-17 82.8
MS.gene013665.t1 MTR_6g086380 68.889 45 14 0 424 468 56 100 1.38e-13 67.0
MS.gene013665.t1 MTR_2g039800 50.000 54 26 1 418 470 48 101 2.01e-11 60.8
MS.gene013665.t1 MTR_4g122970 40.000 80 41 4 4 80 12 87 3.31e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013665.t1 AT5G42240 74.000 450 117 0 25 474 24 473 0.0 712
MS.gene013665.t1 AT1G43780 70.536 448 131 1 26 472 30 477 0.0 697
MS.gene013665.t1 AT5G42230 68.502 454 141 1 17 468 10 463 0.0 666
MS.gene013665.t1 AT5G42230 68.502 454 141 1 17 468 10 463 0.0 666
MS.gene013665.t1 AT2G12480 67.888 464 138 4 12 472 7 462 0.0 663
MS.gene013665.t1 AT2G12480 64.655 464 129 5 12 472 7 438 0.0 620
MS.gene013665.t1 AT2G12480 64.224 464 129 5 12 472 7 436 0.0 615
MS.gene013665.t1 AT2G12480 64.086 465 129 6 12 472 7 437 0.0 610
MS.gene013665.t1 AT2G33530 48.513 437 218 5 32 466 32 463 3.00e-148 431
MS.gene013665.t1 AT1G28110 47.368 437 221 6 32 466 30 459 8.57e-142 415
MS.gene013665.t1 AT1G28110 47.368 437 221 6 32 466 30 459 8.57e-142 415
MS.gene013665.t1 AT4G30610 43.633 479 243 10 1 467 1 464 5.14e-123 367
MS.gene013665.t1 AT3G02110 41.350 474 250 8 6 465 12 471 7.07e-120 359
MS.gene013665.t1 AT2G24000 44.045 445 226 8 31 464 28 460 2.83e-119 357
MS.gene013665.t1 AT3G63470 42.325 456 241 9 17 469 65 501 3.05e-119 358
MS.gene013665.t1 AT5G23210 42.048 459 228 10 32 465 50 495 1.17e-116 352
MS.gene013665.t1 AT2G24010 43.280 439 234 7 31 467 28 453 2.30e-116 350
MS.gene013665.t1 AT4G30810 40.899 467 261 7 2 464 6 461 4.84e-115 347
MS.gene013665.t1 AT2G35780 42.955 440 231 9 31 465 27 451 2.87e-114 344
MS.gene013665.t1 AT5G08260 40.173 463 248 8 21 466 27 477 2.52e-113 343
MS.gene013665.t1 AT1G61130 42.664 443 237 10 30 465 28 460 2.99e-113 342
MS.gene013665.t1 AT2G24010 41.630 454 235 8 31 467 28 468 5.24e-111 336
MS.gene013665.t1 AT1G11080 41.758 455 232 10 31 465 48 489 2.69e-110 335
MS.gene013665.t1 AT1G11080 41.758 455 232 10 31 465 48 489 2.98e-110 335
MS.gene013665.t1 AT3G07990 40.950 442 245 8 30 467 30 459 6.60e-110 333
MS.gene013665.t1 AT2G35770 41.099 455 245 10 19 467 23 460 1.43e-109 332
MS.gene013665.t1 AT4G15100 40.586 478 259 9 5 467 16 483 1.03e-106 326
MS.gene013665.t1 AT3G17180 40.175 458 235 10 32 467 37 477 4.40e-105 322
MS.gene013665.t1 AT3G52020 40.590 441 241 10 31 467 77 500 1.02e-104 321
MS.gene013665.t1 AT2G24010 39.832 477 232 11 33 467 1 464 3.16e-104 319
MS.gene013665.t1 AT2G05850 39.865 444 242 8 31 467 61 486 1.87e-103 317
MS.gene013665.t1 AT3G52000 38.688 442 245 9 31 467 61 481 8.84e-103 315
MS.gene013665.t1 AT3G52010 40.000 445 239 10 31 467 62 486 1.19e-100 310
MS.gene013665.t1 AT5G23210 40.920 413 207 9 32 419 50 450 2.75e-99 306
MS.gene013665.t1 AT5G23210 39.120 409 211 10 82 465 5 400 9.78e-91 282
MS.gene013665.t1 AT5G23210 39.012 405 209 10 86 465 8 399 2.32e-89 278
MS.gene013665.t1 AT3G17180 38.293 410 214 10 32 419 37 429 5.99e-84 266
MS.gene013665.t1 AT2G24010 40.110 364 193 6 33 379 1 356 1.42e-82 259
MS.gene013665.t1 AT4G12910 32.465 499 289 13 5 464 8 497 2.14e-75 245
MS.gene013665.t1 AT5G23210 37.326 359 188 9 86 419 8 354 8.01e-72 232
MS.gene013665.t1 AT3G25420 31.328 482 273 10 29 464 25 494 3.92e-68 226
MS.gene013665.t1 AT4G12910 31.510 457 265 13 5 422 8 455 2.33e-61 207
MS.gene013665.t1 AT3G56540 57.962 157 64 2 31 186 77 232 9.77e-57 189
MS.gene013665.t1 AT1G33540 28.508 449 292 13 33 464 28 464 4.95e-52 182
MS.gene013665.t1 AT2G24000 36.877 301 168 7 174 464 109 397 8.34e-52 180
MS.gene013665.t1 AT2G24000 60.440 91 35 1 31 120 28 118 2.64e-27 113
MS.gene013665.t1 AT1G33540 28.605 430 279 12 51 464 4 421 5.25e-51 179
MS.gene013665.t1 AT2G22920 30.396 454 252 16 33 464 24 435 1.36e-50 178
MS.gene013665.t1 AT5G09640 29.806 463 271 16 33 464 26 465 2.29e-49 176
MS.gene013665.t1 AT2G22990 29.279 444 270 14 33 464 22 433 1.15e-48 173
MS.gene013665.t1 AT1G73290 29.318 440 271 12 33 464 31 438 1.81e-48 172
MS.gene013665.t1 AT1G73300 28.829 444 270 13 33 464 32 441 1.99e-48 172
MS.gene013665.t1 AT1G73300 28.829 444 270 13 33 464 32 441 1.99e-48 172
MS.gene013665.t1 AT3G45010 29.206 428 279 12 39 462 92 499 1.27e-47 172
MS.gene013665.t1 AT2G23000 29.083 447 269 16 33 464 24 437 5.84e-47 168
MS.gene013665.t1 AT2G23000 29.083 447 269 16 33 464 24 437 5.84e-47 168
MS.gene013665.t1 AT5G36180 28.507 442 274 14 33 464 32 441 1.70e-46 167
MS.gene013665.t1 AT1G73280 28.118 441 277 12 33 464 32 441 2.36e-46 167
MS.gene013665.t1 AT2G22970 29.505 444 267 15 33 464 24 433 5.73e-46 166
MS.gene013665.t1 AT2G22980 27.828 442 273 15 33 464 25 430 1.14e-45 165
MS.gene013665.t1 AT3G12203 29.032 434 273 11 37 464 12 416 1.24e-45 164
MS.gene013665.t1 AT1G73270 28.315 445 271 15 33 464 32 441 2.82e-45 164
MS.gene013665.t1 AT3G12203 29.032 434 273 11 37 464 33 437 2.86e-45 164
MS.gene013665.t1 AT1G73270 28.315 445 271 15 33 464 32 441 2.96e-45 164
MS.gene013665.t1 AT1G73310 27.169 438 285 11 33 464 32 441 4.12e-45 163
MS.gene013665.t1 AT5G22980 28.506 435 279 11 44 473 95 502 7.52e-45 164
MS.gene013665.t1 AT3G12240 27.664 441 279 13 33 464 27 436 8.31e-45 162
MS.gene013665.t1 AT3G10450 28.475 446 269 14 33 464 28 437 9.01e-45 162
MS.gene013665.t1 AT3G12230 27.891 441 278 14 33 464 26 435 1.04e-43 159
MS.gene013665.t1 AT3G10450 28.337 427 257 13 51 464 4 394 2.55e-43 157
MS.gene013665.t1 AT2G22990 29.187 418 253 13 33 438 22 408 2.57e-43 158
MS.gene013665.t1 AT2G22990 29.117 419 254 13 33 439 22 409 2.94e-43 159
MS.gene013665.t1 AT3G12203 29.167 408 255 10 62 464 1 379 3.79e-43 157
MS.gene013665.t1 AT2G23010 26.682 446 281 11 33 464 24 437 4.16e-43 158
MS.gene013665.t1 AT3G12220 27.438 441 280 13 33 464 26 435 6.67e-43 157
MS.gene013665.t1 AT2G23010 26.457 446 282 11 33 464 24 437 1.33e-42 156
MS.gene013665.t1 AT2G22990 28.604 444 264 15 33 464 22 424 2.39e-42 155
MS.gene013665.t1 AT2G22980 27.818 417 256 14 33 439 25 406 9.60e-42 154
MS.gene013665.t1 AT2G22970 29.762 420 250 14 33 440 24 410 1.09e-41 154
MS.gene013665.t1 AT2G22970 29.594 419 250 14 33 439 24 409 2.28e-41 152
MS.gene013665.t1 AT2G22980 27.885 416 255 14 33 438 25 405 2.80e-41 153
MS.gene013665.t1 AT3G12220 27.488 422 267 12 51 464 15 405 3.08e-41 152
MS.gene013665.t1 AT3G10410 28.276 435 284 13 39 468 90 501 9.12e-41 153
MS.gene013665.t1 AT2G22920 29.710 414 228 15 33 424 24 396 1.83e-40 150
MS.gene013665.t1 AT3G10450 28.266 421 253 13 33 439 28 413 6.91e-40 149
MS.gene013665.t1 AT3G10450 28.109 402 241 12 51 439 4 370 1.98e-38 144
MS.gene013665.t1 AT1G73290 28.250 400 248 11 33 424 31 399 3.38e-38 144
MS.gene013665.t1 AT1G73310 26.139 417 271 11 33 439 32 421 2.13e-35 137
MS.gene013665.t1 AT3G12220 25.285 439 240 11 33 464 26 383 3.85e-34 132
MS.gene013665.t1 AT1G15000 26.744 430 277 11 41 464 29 426 7.14e-34 132
MS.gene013665.t1 AT2G22920 35.268 224 134 5 33 248 24 244 3.48e-33 128
MS.gene013665.t1 AT1G73290 33.929 224 137 5 33 248 31 251 1.43e-31 123
MS.gene013665.t1 AT2G22970 34.821 224 134 5 33 248 24 243 2.06e-31 123
MS.gene013665.t1 AT2G22990 27.429 350 217 11 121 464 1 319 2.41e-30 120
MS.gene013665.t1 AT1G73280 29.167 264 168 6 33 281 32 291 3.36e-30 121
MS.gene013665.t1 AT1G73280 25.926 351 227 9 117 464 19 339 4.52e-30 120
MS.gene013665.t1 AT2G22990 27.143 350 218 11 121 464 1 319 1.42e-29 118
MS.gene013665.t1 AT5G36180 26.705 352 223 11 117 464 19 339 1.52e-29 118
MS.gene013665.t1 AT5G36180 26.705 352 223 11 117 464 19 339 1.52e-29 118
MS.gene013665.t1 AT2G22980 29.851 268 166 9 33 290 25 280 4.19e-29 117
MS.gene013665.t1 AT1G73280 25.581 344 223 9 124 464 1 314 5.35e-28 114
MS.gene013665.t1 AT5G36180 25.959 339 217 10 105 439 7 315 6.40e-25 105
MS.gene013665.t1 AT2G22980 24.768 323 205 11 121 439 1 289 7.57e-24 101
MS.gene013665.t1 AT5G22960 31.429 175 98 3 39 212 25 178 4.00e-22 94.0
MS.gene013665.t1 AT1G73310 24.159 327 218 8 117 439 19 319 1.20e-20 93.2
MS.gene013665.t1 AT5G36180 25.962 312 197 10 117 424 19 300 8.42e-20 90.9
MS.gene013665.t1 AT2G22920 27.797 295 156 13 186 464 3 256 7.35e-19 86.7
MS.gene013665.t1 AT2G27920 23.775 408 279 12 77 464 66 461 3.17e-18 87.4
MS.gene013665.t1 AT2G22960 28.169 142 94 4 323 464 51 184 1.62e-11 63.5

Find 118 sgRNAs with CRISPR-Local

Find 209 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTCTGTAATCTTGAATTTC+AGG 0.179650 3.3:+75545775 None:intergenic
TTCAAAATCATATTCCAATA+TGG 0.199431 3.3:-75545966 MS.gene013665:CDS
TGGAAACCCACTTCTGAAAA+TGG 0.247519 3.3:-75547036 MS.gene013665:CDS
AGTTTCAAGTTCAACATAAA+AGG 0.261935 3.3:-75547229 MS.gene013665:CDS
ATATTCCAATATGGGTTTAT+AGG 0.279113 3.3:-75545957 MS.gene013665:intron
AGCTTGTTGGTAACAACAAT+TGG 0.326510 3.3:-75548892 MS.gene013665:CDS
TGCCATATGGACAACCTTCT+AGG 0.327165 3.3:-75545536 MS.gene013665:CDS
CCATCACCAGAAGGATAAAA+TGG 0.329912 3.3:+75548233 None:intergenic
ATGAAATTGGTCTTGCCATT+AGG 0.331349 3.3:-75546959 MS.gene013665:CDS
TTACAGACTCATATAGAGTT+TGG 0.337975 3.3:-75545761 MS.gene013665:CDS
TCGAGGAAGTTGTTTCTTAC+CGG 0.344513 3.3:-75547605 MS.gene013665:CDS
GATTCAGTTGTTCCATTACT+AGG 0.346899 3.3:-75545831 MS.gene013665:CDS
GGAGGTTGGGTAACTGAGTA+TGG 0.355586 3.3:-75545603 MS.gene013665:CDS
TGAACTATCCGTTTGAGAAT+TGG 0.357516 3.3:+75545985 None:intergenic
CATATACATACCTGTATTCC+AGG 0.358264 3.3:+75548184 None:intergenic
TCAAAATCATATTCCAATAT+GGG 0.358601 3.3:-75545965 MS.gene013665:CDS
TTCACAACTAGATCTTCAAT+TGG 0.361948 3.3:+75548856 None:intergenic
CTACACATGCCCCATGGATA+TGG 0.362091 3.3:+75546524 None:intergenic
AGTTTCCAATCTCCTCTTTG+TGG 0.370612 3.3:-75547901 MS.gene013665:CDS
AACTACCTATAAACCCATAT+TGG 0.374766 3.3:+75545952 None:intergenic
TACAATTCATTCTCCAATTG+AGG 0.378099 3.3:+75545455 None:intergenic
AAGCAACATATGAATATTAC+TGG 0.389075 3.3:-75547001 MS.gene013665:CDS
GTGTTGTTTGTGGTGGCATA+TGG 0.390969 3.3:-75548916 MS.gene013665:CDS
CTGGTCACACGGAATGATTT+CGG 0.395080 3.3:-75546982 MS.gene013665:CDS
ATTGAGGGTTTAGTAGTGTT+TGG 0.395143 3.3:+75545471 None:intergenic
GCCCTAGAAGGTTGTCCATA+TGG 0.398512 3.3:+75545534 None:intergenic
TTGACTTTCGCCACTGTAAG+AGG 0.404074 3.3:-75545573 MS.gene013665:CDS
ATATATTTACCTGCCCTTTG+TGG 0.407790 3.3:+75545736 None:intergenic
CTCTTTGTGGAGTCTCCCGC+TGG 0.412475 3.3:-75547888 MS.gene013665:CDS
GGAATGATTTCGGATGAAAT+TGG 0.412496 3.3:-75546972 MS.gene013665:CDS
AATTCAAAGTCCTGGAATAC+AGG 0.414065 3.3:-75548194 MS.gene013665:intron
ATATTGACTGAATTTAACTT+TGG 0.416798 3.3:+75548819 None:intergenic
ATGGGAAAGTGTTGGTTTGT+TGG 0.421010 3.3:-75548940 MS.gene013665:CDS
TATTGACTGAATTTAACTTT+GGG 0.423688 3.3:+75548820 None:intergenic
GCTTGTTGGTAACAACAATT+GGG 0.424484 3.3:-75548891 MS.gene013665:CDS
ATTTCTTGTTCAGCTATAGC+TGG 0.425988 3.3:+75546798 None:intergenic
GTAACAACAATTGGGGTAGA+AGG 0.426136 3.3:-75548883 MS.gene013665:CDS
TATTACCTCCATTGAGCCAT+AGG 0.439967 3.3:+75548704 None:intergenic
AAAATCACAATCATTCCTAA+TGG 0.440186 3.3:+75546944 None:intergenic
AACACTACTAAACCCTCAAT+TGG 0.441749 3.3:-75545468 MS.gene013665:CDS
AACTTCCTCGATTTGTATGA+AGG 0.442362 3.3:+75547617 None:intergenic
GTAATGGAACAACTGAATCT+TGG 0.442814 3.3:+75545835 None:intergenic
TACGAAGAAATTCAAAGTCC+TGG 0.444786 3.3:-75548202 MS.gene013665:CDS
AATAGATGTAATGCCCTAGA+AGG 0.456374 3.3:+75545522 None:intergenic
GTTTGTTGGAGTGTTGTTTG+TGG 0.459216 3.3:-75548926 MS.gene013665:CDS
AAAAGCACCTCCTCCGATAG+AGG 0.462804 3.3:+75548268 None:intergenic
TGGAGAGCCTTCTGAACCTC+AGG 0.468727 3.3:+75546566 None:intergenic
GTGGAGTCTCCCGCTGGAGT+TGG 0.470449 3.3:-75547882 MS.gene013665:CDS
ATAGAGTTTGGTTCCACAAA+GGG 0.470528 3.3:-75545749 MS.gene013665:CDS
GCGGGTCACATGGTGCCATA+TGG 0.470975 3.3:-75545549 MS.gene013665:CDS
TACTAATCTGCCATATCCAT+GGG 0.479527 3.3:-75546534 MS.gene013665:CDS
GTTAAATTCAGTCAATATGC+TGG 0.485104 3.3:-75548814 MS.gene013665:CDS
CCTCTCACCCTATGGCTCAA+TGG 0.485243 3.3:-75548712 MS.gene013665:CDS
GACTGAATTTAACTTTGGGT+TGG 0.486607 3.3:+75548824 None:intergenic
ACAACTTCTGATTATAACAT+TGG 0.489905 3.3:-75547843 MS.gene013665:CDS
AGACTCCACAAAGAGGAGAT+TGG 0.491453 3.3:+75547896 None:intergenic
GATCTAGTTGTGAAGTTGCC+AGG 0.494140 3.3:-75548847 MS.gene013665:CDS
TGGACCTGCATAGCTTTCTC+CGG 0.497380 3.3:+75547586 None:intergenic
TATCCTTCTGGTGATGGACG+CGG 0.498312 3.3:-75548227 MS.gene013665:CDS
CAGGAACAAAAGCATGTCAT+TGG 0.499350 3.3:+75547661 None:intergenic
ACAATTCATTCTCCAATTGA+GGG 0.500289 3.3:+75545456 None:intergenic
AATTTAACTTTGGGTTGGCC+TGG 0.501987 3.3:+75548829 None:intergenic
ATATGCTTCCAATTCTCAAA+CGG 0.502822 3.3:-75545993 MS.gene013665:CDS
TGTTGGAGTGTTGTTTGTGG+TGG 0.503160 3.3:-75548923 MS.gene013665:CDS
TTCGCCACTGTAAGAGGAGC+GGG 0.509393 3.3:-75545567 MS.gene013665:CDS
GCCATATGGACAACCTTCTA+GGG 0.514262 3.3:-75545535 MS.gene013665:CDS
ATTATAATCAAGAATGGCAT+TGG 0.521613 3.3:+75547264 None:intergenic
CTATTCAGCTCCTTTGTGCA+TGG 0.523679 3.3:-75545504 MS.gene013665:CDS
TTATTAGAATGGGAAAGTGT+TGG 0.524595 3.3:-75548948 None:intergenic
CTTACCGGAGAAAGCTATGC+AGG 0.524600 3.3:-75547590 MS.gene013665:intron
TCTGAACCTCAGGCAGGTTG+AGG 0.529529 3.3:+75546576 None:intergenic
GGTCCGGGATGTTCCTCTAT+CGG 0.532762 3.3:-75548281 MS.gene013665:CDS
ATGAGCATTATAATCAAGAA+TGG 0.534017 3.3:+75547258 None:intergenic
AACATTGGTGACGCCTCCAC+AGG 0.534280 3.3:-75547828 MS.gene013665:intron
ATTACCTCCATTGAGCCATA+GGG 0.535044 3.3:+75548705 None:intergenic
TCACAACTAGATCTTCAATT+GGG 0.535707 3.3:+75548857 None:intergenic
GTACTAATCTGCCATATCCA+TGG 0.541288 3.3:-75546535 MS.gene013665:CDS
ACTTCTCGTACCATTTCAGC+AGG 0.548397 3.3:+75547642 None:intergenic
GGTGGCATATGGAAGCTTGT+TGG 0.550255 3.3:-75548905 MS.gene013665:CDS
ATACGTTATGAGTAGTTGCA+TGG 0.562834 3.3:+75546910 None:intergenic
GCAGATTAGTACGGTTGGCA+TGG 0.563219 3.3:+75546546 None:intergenic
AGAATGGCATTGGCTAATTG+AGG 0.563874 3.3:+75547274 None:intergenic
CAACCTGCCTGAGGTTCAGA+AGG 0.564507 3.3:-75546573 MS.gene013665:CDS
GAGCCTTCTGAACCTCAGGC+AGG 0.567516 3.3:+75546570 None:intergenic
AGTTTGGTTCCACAAAGGGC+AGG 0.573792 3.3:-75545745 MS.gene013665:intron
GGATGTTCCTCTATCGGAGG+AGG 0.577355 3.3:-75548275 MS.gene013665:CDS
TATGACCAACCAACTCCAGC+GGG 0.579633 3.3:+75547873 None:intergenic
ATATGGCAGATTAGTACGGT+TGG 0.580186 3.3:+75546541 None:intergenic
AGTCTCCCGCTGGAGTTGGT+TGG 0.582374 3.3:-75547878 MS.gene013665:CDS
ATGGATATGGCAGATTAGTA+CGG 0.582412 3.3:+75546537 None:intergenic
GCATGTGTAGGCTGGAGGTT+GGG 0.585017 3.3:-75545616 MS.gene013665:intron
ATTGGAAGCATATTAGCGTA+AGG 0.588336 3.3:+75546003 None:intergenic
TAACAACAATTGGGGTAGAA+GGG 0.589048 3.3:-75548882 MS.gene013665:CDS
TACGTTATGAGTAGTTGCAT+GGG 0.589405 3.3:+75546911 None:intergenic
TGCATGTGTAGGCTGGAGGT+TGG 0.590249 3.3:-75545617 MS.gene013665:intron
AGTGTTCGAGAACCTAGTAA+TGG 0.592866 3.3:+75545819 None:intergenic
CCATTGAGCCATAGGGTGAG+AGG 0.592895 3.3:+75548712 None:intergenic
GTTGATATAGATATAAAACA+TGG 0.595163 3.3:-75548787 MS.gene013665:CDS
TGTAAGAGGAGCGGGTCACA+TGG 0.600160 3.3:-75545559 MS.gene013665:CDS
TACTCACTACACATGCCCCA+TGG 0.601045 3.3:+75546518 None:intergenic
TATAGAGTTTGGTTCCACAA+AGG 0.604917 3.3:-75545750 MS.gene013665:CDS
AGTTTCCTTCATACAAATCG+AGG 0.605088 3.3:-75547622 MS.gene013665:CDS
TAATTACCTCAACCTGCCTG+AGG 0.606984 3.3:-75546582 MS.gene013665:CDS
GTGACCCGCTCCTCTTACAG+TGG 0.608929 3.3:+75545563 None:intergenic
CCTCCGATAGAGGAACATCC+CGG 0.613367 3.3:+75548278 None:intergenic
CAATCTCTTTCCATGCACAA+AGG 0.621559 3.3:+75545494 None:intergenic
TTGATATAGATATAAAACAT+GGG 0.633528 3.3:-75548786 MS.gene013665:CDS
CCGGGATGTTCCTCTATCGG+AGG 0.639230 3.3:-75548278 MS.gene013665:CDS
CTCACCCTATGGCTCAATGG+AGG 0.646306 3.3:-75548709 MS.gene013665:intron
TATGAATATTACTGGTCACA+CGG 0.646588 3.3:-75546993 MS.gene013665:CDS
CAGCGGGAGACTCCACAAAG+AGG 0.654135 3.3:+75547889 None:intergenic
AGACCGCGTCCATCACCAGA+AGG 0.655604 3.3:+75548224 None:intergenic
TTTCGCCACTGTAAGAGGAG+CGG 0.662666 3.3:-75545568 MS.gene013665:CDS
CTTGTTGGTAACAACAATTG+GGG 0.679916 3.3:-75548890 MS.gene013665:CDS
ATATAGATATAAAACATGGG+AGG 0.711528 3.3:-75548783 MS.gene013665:CDS
TTAATGCATGTGTAGGCTGG+AGG 0.712606 3.3:-75545621 MS.gene013665:intron
GTATGACCAACCAACTCCAG+CGG 0.719006 3.3:+75547872 None:intergenic
ACTAATCTGCCATATCCATG+GGG 0.764052 3.3:-75546533 MS.gene013665:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACGATAAATTATTAAATT+TGG + chr3.3:75546861-75546880 None:intergenic 10.0%
!! ATAAATAAATTGTTCTTTAT+TGG - chr3.3:75546066-75546085 MS.gene013665:intron 10.0%
!! CTTTGATATATAAATATTAT+TGG - chr3.3:75548065-75548084 MS.gene013665:intron 10.0%
!!! AATTTGTTAGTTTTATTATT+AGG - chr3.3:75546684-75546703 MS.gene013665:intron 10.0%
!! AACATACGAAATTAAATAAA+AGG + chr3.3:75545787-75545806 None:intergenic 15.0%
!! ACATCTTAAAATAAAGAAAA+AGG + chr3.3:75545988-75546007 None:intergenic 15.0%
!! ATTTAATATATCATGTGAAT+CGG + chr3.3:75547212-75547231 None:intergenic 15.0%
!! TCATAATAATTTAACAAGTA+TGG + chr3.3:75548537-75548556 None:intergenic 15.0%
!! TTGATATAGATATAAAACAT+GGG - chr3.3:75545615-75545634 MS.gene013665:intron 15.0%
!! TTGTTAAATTATTATGATAG+TGG - chr3.3:75548540-75548559 MS.gene013665:intron 15.0%
!! TTTCAATATGCAAAAAAATT+AGG + chr3.3:75548709-75548728 None:intergenic 15.0%
!!! ATTAAATTGGTTAATTTTCT+AGG - chr3.3:75546099-75546118 MS.gene013665:intron 15.0%
!!! TATTTTTTGTATGTTATACA+TGG - chr3.3:75546661-75546680 MS.gene013665:intron 15.0%
!!! TTAAATTAATTTTGTCTACA+AGG + chr3.3:75547965-75547984 None:intergenic 15.0%
!! AAAAATTAAATTTAGTGTCG+TGG - chr3.3:75546890-75546909 MS.gene013665:CDS 20.0%
!! AATAAATTGTTCTTTATTGG+AGG - chr3.3:75546069-75546088 MS.gene013665:intron 20.0%
!! AATTTGATTATTGTGTTTGT+TGG + chr3.3:75546838-75546857 None:intergenic 20.0%
!! AGAGATATAATTGATATGAA+TGG - chr3.3:75548108-75548127 MS.gene013665:intron 20.0%
!! ATAAATTGTTCTTTATTGGA+GGG - chr3.3:75546070-75546089 MS.gene013665:intron 20.0%
!! ATAATTTAACAAGTATGGTA+AGG + chr3.3:75548532-75548551 None:intergenic 20.0%
!! CAAAAGTTATAATAATCCAA+AGG + chr3.3:75547655-75547674 None:intergenic 20.0%
!! GTTGATATAGATATAAAACA+TGG - chr3.3:75545614-75545633 MS.gene013665:intron 20.0%
!! TAAAAAATTAATGCATGTGT+AGG - chr3.3:75548773-75548792 MS.gene013665:CDS 20.0%
!! TCAAAATCATATTCCAATAT+GGG - chr3.3:75548436-75548455 MS.gene013665:intron 20.0%
!! TTCAAAATCATATTCCAATA+TGG - chr3.3:75548435-75548454 MS.gene013665:intron 20.0%
!! TTGATATTTGAGAATTATGT+GGG - chr3.3:75546430-75546449 MS.gene013665:intron 20.0%
!! TTTGATATTTGAGAATTATG+TGG - chr3.3:75546429-75546448 MS.gene013665:intron 20.0%
!! TTTGTTTATTTCATTAATGC+AGG - chr3.3:75547747-75547766 MS.gene013665:intron 20.0%
!!! ACGACACTAAATTTAATTTT+TGG + chr3.3:75546891-75546910 None:intergenic 20.0%
!!! AGATATTGACTACATAAATT+TGG + chr3.3:75546620-75546639 None:intergenic 20.0%
!!! ATATTGACTGAATTTAACTT+TGG + chr3.3:75545585-75545604 None:intergenic 20.0%
!!! ATGATATAATTTTGTTAAGC+TGG + chr3.3:75545935-75545954 None:intergenic 20.0%
!!! ATTATTATAACTTTTGCCTT+TGG - chr3.3:75547659-75547678 MS.gene013665:CDS 20.0%
!!! ATTGAAAATTGATTTGAGTA+TGG - chr3.3:75548722-75548741 MS.gene013665:CDS 20.0%
!!! TATTGACTGAATTTAACTTT+GGG + chr3.3:75545584-75545603 None:intergenic 20.0%
! AAAATCACAATCATTCCTAA+TGG + chr3.3:75547460-75547479 None:intergenic 25.0%
! AAATATTCAATTTAGCAGAG+AGG - chr3.3:75546917-75546936 MS.gene013665:CDS 25.0%
! AAGCAACATATGAATATTAC+TGG - chr3.3:75547400-75547419 MS.gene013665:intron 25.0%
! ACAACTTCTGATTATAACAT+TGG - chr3.3:75546558-75546577 MS.gene013665:CDS 25.0%
! ACATGAACAATATATAAGTC+AGG + chr3.3:75546466-75546485 None:intergenic 25.0%
! AGAAATCAGATTGAAAAAGA+TGG - chr3.3:75547620-75547639 MS.gene013665:CDS 25.0%
! AGATGATTTGAATTTGATGT+TGG + chr3.3:75546036-75546055 None:intergenic 25.0%
! ATATAGATATAAAACATGGG+AGG - chr3.3:75545618-75545637 MS.gene013665:intron 25.0%
! ATATTCCAATATGGGTTTAT+AGG - chr3.3:75548444-75548463 MS.gene013665:intron 25.0%
! ATGAGCATTATAATCAAGAA+TGG + chr3.3:75547146-75547165 None:intergenic 25.0%
! ATGTTTACTATGATCATATG+AGG + chr3.3:75548288-75548307 None:intergenic 25.0%
! ATTATAATCAAGAATGGCAT+TGG + chr3.3:75547140-75547159 None:intergenic 25.0%
! CAAATTCAAATCATCTTACA+AGG - chr3.3:75546040-75546059 MS.gene013665:intron 25.0%
! TAAATTGTTCTTTATTGGAG+GGG - chr3.3:75546071-75546090 MS.gene013665:intron 25.0%
! TGAATGGAGTTTACAAATAT+AGG - chr3.3:75548124-75548143 MS.gene013665:intron 25.0%
! TTCCAATCTAACAAAGTTAA+GGG + chr3.3:75547350-75547369 None:intergenic 25.0%
! TTTCCAATCTAACAAAGTTA+AGG + chr3.3:75547351-75547370 None:intergenic 25.0%
!! TCTTACATACTAACATTTTC+AGG - chr3.3:75547094-75547113 MS.gene013665:intron 25.0%
!! TTGTTATCATGAAGTTTTAC+CGG - chr3.3:75547930-75547949 MS.gene013665:intron 25.0%
!! TTTTATGTTGAACTTGAAAC+TGG + chr3.3:75547173-75547192 None:intergenic 25.0%
!!! AGTTTCAAGTTCAACATAAA+AGG - chr3.3:75547172-75547191 MS.gene013665:intron 25.0%
!!! ATTTCGTATGTTGATAGTAT+AGG - chr3.3:75545795-75545814 MS.gene013665:CDS 25.0%
!!! TCTCTTCTATTATTTTGTTG+AGG - chr3.3:75545643-75545662 MS.gene013665:intron 25.0%
AAAACCTATGTCATCATTTC+TGG - chr3.3:75546980-75546999 MS.gene013665:CDS 30.0%
AACCATCAAATTTACTAGCT+AGG - chr3.3:75548212-75548231 MS.gene013665:CDS 30.0%
AACTACCTATAAACCCATAT+TGG + chr3.3:75548452-75548471 None:intergenic 30.0%
AGTCTGTAATCTTGAATTTC+AGG + chr3.3:75548629-75548648 None:intergenic 30.0%
ATATGCTTCCAATTCTCAAA+CGG - chr3.3:75548408-75548427 MS.gene013665:intron 30.0%
GTTAAATTCAGTCAATATGC+TGG - chr3.3:75545587-75545606 MS.gene013665:CDS 30.0%
TAGGCAAAAGAACACAATTA+AGG + chr3.3:75547049-75547068 None:intergenic 30.0%
TATGAATATTACTGGTCACA+CGG - chr3.3:75547408-75547427 MS.gene013665:intron 30.0%
TCACAACTAGATCTTCAATT+GGG + chr3.3:75545547-75545566 None:intergenic 30.0%
TGGAGGGGAATTAATTAAAT+TGG - chr3.3:75546086-75546105 MS.gene013665:intron 30.0%
TTACAGACTCATATAGAGTT+TGG - chr3.3:75548640-75548659 MS.gene013665:intron 30.0%
TTCACAACTAGATCTTCAAT+TGG + chr3.3:75545548-75545567 None:intergenic 30.0%
TTCCCTTAACTTTGTTAGAT+TGG - chr3.3:75547345-75547364 MS.gene013665:intron 30.0%
TTCCTAGCTAGTAAATTTGA+TGG + chr3.3:75548217-75548236 None:intergenic 30.0%
! ACTACATGAAAGCAAGATTT+TGG + chr3.3:75546270-75546289 None:intergenic 30.0%
! ATTGGTTAATTTTCTAGGTC+CGG - chr3.3:75546104-75546123 MS.gene013665:intron 30.0%
! CAAATCTAATTTTGTACCTG+TGG + chr3.3:75546592-75546611 None:intergenic 30.0%
! GAAATTTGCTTTGTCTAATC+TGG + chr3.3:75546317-75546336 None:intergenic 30.0%
! TGTTATCATGAAGTTTTACC+GGG - chr3.3:75547931-75547950 MS.gene013665:intron 30.0%
!!! CTATATATTTGTGCCACTTT+TGG - chr3.3:75547246-75547265 MS.gene013665:CDS 30.0%
AAATTAATGCATGTGTAGGC+TGG - chr3.3:75548777-75548796 MS.gene013665:CDS 35.0%
AACACTACTAAACCCTCAAT+TGG - chr3.3:75548933-75548952 MS.gene013665:CDS 35.0%
AATAGATGTAATGCCCTAGA+AGG + chr3.3:75548882-75548901 None:intergenic 35.0%
AATTCAAAGTCCTGGAATAC+AGG - chr3.3:75546207-75546226 MS.gene013665:intron 35.0%
AGGAAAAACTTGTGACAACA+TGG + chr3.3:75545767-75545786 None:intergenic 35.0%
AGTTTCCTTCATACAAATCG+AGG - chr3.3:75546779-75546798 MS.gene013665:intron 35.0%
ATACGTTATGAGTAGTTGCA+TGG + chr3.3:75547494-75547513 None:intergenic 35.0%
ATATATTTACCTGCCCTTTG+TGG + chr3.3:75548668-75548687 None:intergenic 35.0%
ATCATGTGAATCGGATCTTA+CGG + chr3.3:75547203-75547222 None:intergenic 35.0%
ATGGATATGGCAGATTAGTA+CGG + chr3.3:75547867-75547886 None:intergenic 35.0%
ATTGAGGGTTTAGTAGTGTT+TGG + chr3.3:75548933-75548952 None:intergenic 35.0%
ATTTCTTGTTCAGCTATAGC+TGG + chr3.3:75547606-75547625 None:intergenic 35.0%
CATATACATACCTGTATTCC+AGG + chr3.3:75546220-75546239 None:intergenic 35.0%
GACAATAAAACCACCTGATT+TGG + chr3.3:75545892-75545911 None:intergenic 35.0%
GATTCAGTTGTTCCATTACT+AGG - chr3.3:75548570-75548589 MS.gene013665:intron 35.0%
GGAATGATTTCGGATGAAAT+TGG - chr3.3:75547429-75547448 MS.gene013665:intron 35.0%
GGCAGAACATAATAATCCAA+AGG + chr3.3:75547678-75547697 None:intergenic 35.0%
TAACAACAATTGGGGTAGAA+GGG - chr3.3:75545519-75545538 MS.gene013665:CDS 35.0%
TACGAAGAAATTCAAAGTCC+TGG - chr3.3:75546199-75546218 MS.gene013665:intron 35.0%
TACGTTATGAGTAGTTGCAT+GGG + chr3.3:75547493-75547512 None:intergenic 35.0%
TACTAATCTGCCATATCCAT+GGG - chr3.3:75547867-75547886 MS.gene013665:CDS 35.0%
TGAACTATCCGTTTGAGAAT+TGG + chr3.3:75548419-75548438 None:intergenic 35.0%
! AACTTCCTCGATTTGTATGA+AGG + chr3.3:75546787-75546806 None:intergenic 35.0%
! AAGATGGTAACTTTTGCCTT+TGG - chr3.3:75547636-75547655 MS.gene013665:CDS 35.0%
! AATTTTCCTAGCGGCATTTT+TGG + chr3.3:75547535-75547554 None:intergenic 35.0%
! ATAGAGTTTGGTTCCACAAA+GGG - chr3.3:75548652-75548671 MS.gene013665:intron 35.0%
! ATCTAATTTTGTACCTGTGG+AGG + chr3.3:75546589-75546608 None:intergenic 35.0%
! ATTGGAAGCATATTAGCGTA+AGG + chr3.3:75548401-75548420 None:intergenic 35.0%
! GACTGAATTTAACTTTGGGT+TGG + chr3.3:75545580-75545599 None:intergenic 35.0%
! GTAATGGAACAACTGAATCT+TGG + chr3.3:75548569-75548588 None:intergenic 35.0%
! TATAGAGTTTGGTTCCACAA+AGG - chr3.3:75548651-75548670 MS.gene013665:intron 35.0%
! TTGGTTAATTTTCTAGGTCC+GGG - chr3.3:75546105-75546124 MS.gene013665:intron 35.0%
!! AAGCAAGATTTTGGTGAAGA+CGG + chr3.3:75546261-75546280 None:intergenic 35.0%
!! AGCTTGTTGGTAACAACAAT+TGG - chr3.3:75545509-75545528 MS.gene013665:CDS 35.0%
!! ATGAAATTGGTCTTGCCATT+AGG - chr3.3:75547442-75547461 MS.gene013665:intron 35.0%
!! CTTGTTGGTAACAACAATTG+GGG - chr3.3:75545511-75545530 MS.gene013665:CDS 35.0%
!! GCTTGTTGGTAACAACAATT+GGG - chr3.3:75545510-75545529 MS.gene013665:CDS 35.0%
!! TAAAACCACCTGATTTGGTT+AGG + chr3.3:75545887-75545906 None:intergenic 35.0%
!! TACATGAGCTGCTATTTCTT+CGG + chr3.3:75548336-75548355 None:intergenic 35.0%
ACTAATCTGCCATATCCATG+GGG - chr3.3:75547868-75547887 MS.gene013665:CDS 40.0%
AGTCGATCACAAGTGATCAT+AGG + chr3.3:75547068-75547087 None:intergenic 40.0%
AGTGTTCGAGAACCTAGTAA+TGG + chr3.3:75548585-75548604 None:intergenic 40.0%
AGTTTCCAATCTCCTCTTTG+TGG - chr3.3:75546500-75546519 MS.gene013665:intron 40.0%
ATACACGATCAGTCCAAAAG+TGG + chr3.3:75547262-75547281 None:intergenic 40.0%
ATATGGCAGATTAGTACGGT+TGG + chr3.3:75547863-75547882 None:intergenic 40.0%
ATTACCTCCATTGAGCCATA+GGG + chr3.3:75545699-75545718 None:intergenic 40.0%
CAATCTCTTTCCATGCACAA+AGG + chr3.3:75548910-75548929 None:intergenic 40.0%
CACGTATTTAGTCACAACGT+CGG + chr3.3:75546408-75546427 None:intergenic 40.0%
CCATCACCAGAAGGATAAAA+TGG + chr3.3:75546171-75546190 None:intergenic 40.0%
GTAACAACAATTGGGGTAGA+AGG - chr3.3:75545518-75545537 MS.gene013665:CDS 40.0%
GTACTAATCTGCCATATCCA+TGG - chr3.3:75547866-75547885 MS.gene013665:CDS 40.0%
TATTACCTCCATTGAGCCAT+AGG + chr3.3:75545700-75545719 None:intergenic 40.0%
TCAGCCAGAAATGATGACAT+AGG + chr3.3:75546987-75547006 None:intergenic 40.0%
! CACGATCCATTTTCAGAAGT+GGG + chr3.3:75547374-75547393 None:intergenic 40.0%
! CAGGAACAAAAGCATGTCAT+TGG + chr3.3:75546743-75546762 None:intergenic 40.0%
! CCATTTTATCCTTCTGGTGA+TGG - chr3.3:75546168-75546187 MS.gene013665:intron 40.0%
! GTCTACAAGGTACTATTACC+CGG + chr3.3:75547952-75547971 None:intergenic 40.0%
! TCACGATCCATTTTCAGAAG+TGG + chr3.3:75547375-75547394 None:intergenic 40.0%
! TGCTTTTGTTCCTGCTGAAA+TGG - chr3.3:75546749-75546768 MS.gene013665:intron 40.0%
! TGGAAACCCACTTCTGAAAA+TGG - chr3.3:75547365-75547384 MS.gene013665:intron 40.0%
! TTGGGTCCATTTTATCCTTC+TGG - chr3.3:75546162-75546181 MS.gene013665:intron 40.0%
!! AATTTAACTTTGGGTTGGCC+TGG + chr3.3:75545575-75545594 None:intergenic 40.0%
!! AGAATGGCATTGGCTAATTG+AGG + chr3.3:75547130-75547149 None:intergenic 40.0%
!! ATGGGAAAGTGTTGGTTTGT+TGG - chr3.3:75545461-75545480 MS.gene013665:CDS 40.0%
!! GTTTGTTGGAGTGTTGTTTG+TGG - chr3.3:75545475-75545494 MS.gene013665:CDS 40.0%
!! TCGAGGAAGTTGTTTCTTAC+CGG - chr3.3:75546796-75546815 MS.gene013665:CDS 40.0%
!!! AGGAGGTGCTTTTACTGAAT+TGG - chr3.3:75546143-75546162 MS.gene013665:intron 40.0%
!!! GGAGGTGCTTTTACTGAATT+GGG - chr3.3:75546144-75546163 MS.gene013665:intron 40.0%
ACAAAAAGCCTCTCACCCTA+TGG - chr3.3:75545681-75545700 MS.gene013665:intron 45.0%
ACTTCTCGTACCATTTCAGC+AGG + chr3.3:75546762-75546781 None:intergenic 45.0%
AGACTCCACAAAGAGGAGAT+TGG + chr3.3:75546508-75546527 None:intergenic 45.0%
CTACTCCTAACCAAATCAGG+TGG - chr3.3:75545879-75545898 MS.gene013665:intron 45.0%
CTATTCAGCTCCTTTGTGCA+TGG - chr3.3:75548897-75548916 MS.gene013665:CDS 45.0%
CTGGTCACACGGAATGATTT+CGG - chr3.3:75547419-75547438 MS.gene013665:intron 45.0%
GATCTAGTTGTGAAGTTGCC+AGG - chr3.3:75545554-75545573 MS.gene013665:CDS 45.0%
GCCATATGGACAACCTTCTA+GGG - chr3.3:75548866-75548885 MS.gene013665:CDS 45.0%
GTCCTACTCCTAACCAAATC+AGG - chr3.3:75545876-75545895 MS.gene013665:intron 45.0%
TAATTACCTCAACCTGCCTG+AGG - chr3.3:75547819-75547838 MS.gene013665:intron 45.0%
TGCCATATGGACAACCTTCT+AGG - chr3.3:75548865-75548884 MS.gene013665:CDS 45.0%
TTAATGCATGTGTAGGCTGG+AGG - chr3.3:75548780-75548799 MS.gene013665:CDS 45.0%
TTGACTTTCGCCACTGTAAG+AGG - chr3.3:75548828-75548847 MS.gene013665:CDS 45.0%
! CTCGCTCACAATTTTCCTAG+CGG + chr3.3:75547544-75547563 None:intergenic 45.0%
!! CACCTGATTTGGTTAGGAGT+AGG + chr3.3:75545881-75545900 None:intergenic 45.0%
!! GTGTTGTTTGTGGTGGCATA+TGG - chr3.3:75545485-75545504 MS.gene013665:CDS 45.0%
!! TGTTGGAGTGTTGTTTGTGG+TGG - chr3.3:75545478-75545497 MS.gene013665:CDS 45.0%
!! AAAAAAATAAAAAATATCAT+TGG + chr3.3:75547699-75547718 None:intergenic 5.0%
!!! ATAATTTTTTAATTTGTTTT+TGG - chr3.3:75546714-75546733 MS.gene013665:intron 5.0%
!!! TAATAATAATAATTTTATGA+TGG - chr3.3:75545715-75545734 MS.gene013665:intron 5.0%
!!! TTATTTATTTTATACATTTT+TGG - chr3.3:75548500-75548519 MS.gene013665:intron 5.0%
ACGAAGCCAAAAATGCCGCT+AGG - chr3.3:75547526-75547545 MS.gene013665:intron 50.0%
CTACACATGCCCCATGGATA+TGG + chr3.3:75547880-75547899 None:intergenic 50.0%
CTTACCGGAGAAAGCTATGC+AGG - chr3.3:75546811-75546830 MS.gene013665:CDS 50.0%
GCAGATTAGTACGGTTGGCA+TGG + chr3.3:75547858-75547877 None:intergenic 50.0%
GCCCTAGAAGGTTGTCCATA+TGG + chr3.3:75548870-75548889 None:intergenic 50.0%
GGAGGTTGGGTAACTGAGTA+TGG - chr3.3:75548798-75548817 MS.gene013665:CDS 50.0%
GGTGGCATATGGAAGCTTGT+TGG - chr3.3:75545496-75545515 MS.gene013665:CDS 50.0%
GTATGACCAACCAACTCCAG+CGG + chr3.3:75546532-75546551 None:intergenic 50.0%
TACTCACTACACATGCCCCA+TGG + chr3.3:75547886-75547905 None:intergenic 50.0%
TATGACCAACCAACTCCAGC+GGG + chr3.3:75546531-75546550 None:intergenic 50.0%
TGGACCTGCATAGCTTTCTC+CGG + chr3.3:75546818-75546837 None:intergenic 50.0%
TTTCGCCACTGTAAGAGGAG+CGG - chr3.3:75548833-75548852 MS.gene013665:CDS 50.0%
! AGGGTGAGAGGCTTTTTGTG+AGG + chr3.3:75545680-75545699 None:intergenic 50.0%
! AGTTTGGTTCCACAAAGGGC+AGG - chr3.3:75548656-75548675 MS.gene013665:intron 50.0%
! GGGTGAGAGGCTTTTTGTGA+GGG + chr3.3:75545679-75545698 None:intergenic 50.0%
! TGAGAGGCTTTTTGTGAGGG+AGG + chr3.3:75545676-75545695 None:intergenic 50.0%
!! AAAAGCACCTCCTCCGATAG+AGG + chr3.3:75546136-75546155 None:intergenic 50.0%
!! TATCCTTCTGGTGATGGACG+CGG - chr3.3:75546174-75546193 MS.gene013665:intron 50.0%
CAACCTGCCTGAGGTTCAGA+AGG - chr3.3:75547828-75547847 MS.gene013665:intron 55.0%
CCATTGAGCCATAGGGTGAG+AGG + chr3.3:75545692-75545711 None:intergenic 55.0%
CCTCCGATAGAGGAACATCC+CGG + chr3.3:75546126-75546145 None:intergenic 55.0%
CCTCTCACCCTATGGCTCAA+TGG - chr3.3:75545689-75545708 MS.gene013665:intron 55.0%
CTCACCCTATGGCTCAATGG+AGG - chr3.3:75545692-75545711 MS.gene013665:intron 55.0%
GCATGTGTAGGCTGGAGGTT+GGG - chr3.3:75548785-75548804 MS.gene013665:CDS 55.0%
GGATGTTCCTCTATCGGAGG+AGG - chr3.3:75546126-75546145 MS.gene013665:intron 55.0%
GGTCCGGGATGTTCCTCTAT+CGG - chr3.3:75546120-75546139 MS.gene013665:intron 55.0%
TCTGAACCTCAGGCAGGTTG+AGG + chr3.3:75547828-75547847 None:intergenic 55.0%
TGCATGTGTAGGCTGGAGGT+TGG - chr3.3:75548784-75548803 MS.gene013665:CDS 55.0%
TGGAGAGCCTTCTGAACCTC+AGG + chr3.3:75547838-75547857 None:intergenic 55.0%
TGTAAGAGGAGCGGGTCACA+TGG - chr3.3:75548842-75548861 MS.gene013665:CDS 55.0%
TTCGCCACTGTAAGAGGAGC+GGG - chr3.3:75548834-75548853 MS.gene013665:CDS 55.0%
! GAGGCTTTTTGTGAGGGAGG+TGG + chr3.3:75545673-75545692 None:intergenic 55.0%
!! AACATTGGTGACGCCTCCAC+AGG - chr3.3:75546573-75546592 MS.gene013665:CDS 55.0%
AGACCGCGTCCATCACCAGA+AGG + chr3.3:75546180-75546199 None:intergenic 60.0%
CAGCGGGAGACTCCACAAAG+AGG + chr3.3:75546515-75546534 None:intergenic 60.0%
CCGGGATGTTCCTCTATCGG+AGG - chr3.3:75546123-75546142 MS.gene013665:intron 60.0%
CTCTTTGTGGAGTCTCCCGC+TGG - chr3.3:75546513-75546532 MS.gene013665:intron 60.0%
GAGCCTTCTGAACCTCAGGC+AGG + chr3.3:75547834-75547853 None:intergenic 60.0%
GTGACCCGCTCCTCTTACAG+TGG + chr3.3:75548841-75548860 None:intergenic 60.0%
! AGTCTCCCGCTGGAGTTGGT+TGG - chr3.3:75546523-75546542 MS.gene013665:CDS 60.0%
!! GCGGGTCACATGGTGCCATA+TGG - chr3.3:75548852-75548871 MS.gene013665:CDS 60.0%
GTGGAGTCTCCCGCTGGAGT+TGG - chr3.3:75546519-75546538 MS.gene013665:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 75545461 75548962 75545461 ID=MS.gene013665
chr3.3 mRNA 75545461 75548962 75545461 ID=MS.gene013665.t1;Parent=MS.gene013665
chr3.3 exon 75548710 75548962 75548710 ID=MS.gene013665.t1.exon1;Parent=MS.gene013665.t1
chr3.3 CDS 75548710 75548962 75548710 ID=cds.MS.gene013665.t1;Parent=MS.gene013665.t1
chr3.3 exon 75548195 75548302 75548195 ID=MS.gene013665.t1.exon2;Parent=MS.gene013665.t1
chr3.3 CDS 75548195 75548302 75548195 ID=cds.MS.gene013665.t1;Parent=MS.gene013665.t1
chr3.3 exon 75547829 75547921 75547829 ID=MS.gene013665.t1.exon3;Parent=MS.gene013665.t1
chr3.3 CDS 75547829 75547921 75547829 ID=cds.MS.gene013665.t1;Parent=MS.gene013665.t1
chr3.3 exon 75547591 75547683 75547591 ID=MS.gene013665.t1.exon4;Parent=MS.gene013665.t1
chr3.3 CDS 75547591 75547683 75547591 ID=cds.MS.gene013665.t1;Parent=MS.gene013665.t1
chr3.3 exon 75547222 75547307 75547222 ID=MS.gene013665.t1.exon5;Parent=MS.gene013665.t1
chr3.3 CDS 75547222 75547307 75547222 ID=cds.MS.gene013665.t1;Parent=MS.gene013665.t1
chr3.3 exon 75546782 75547060 75546782 ID=MS.gene013665.t1.exon6;Parent=MS.gene013665.t1
chr3.3 CDS 75546782 75547060 75546782 ID=cds.MS.gene013665.t1;Parent=MS.gene013665.t1
chr3.3 exon 75546521 75546654 75546521 ID=MS.gene013665.t1.exon7;Parent=MS.gene013665.t1
chr3.3 CDS 75546521 75546654 75546521 ID=cds.MS.gene013665.t1;Parent=MS.gene013665.t1
chr3.3 exon 75545958 75546050 75545958 ID=MS.gene013665.t1.exon8;Parent=MS.gene013665.t1
chr3.3 CDS 75545958 75546050 75545958 ID=cds.MS.gene013665.t1;Parent=MS.gene013665.t1
chr3.3 exon 75545746 75545863 75545746 ID=MS.gene013665.t1.exon9;Parent=MS.gene013665.t1
chr3.3 CDS 75545746 75545863 75545746 ID=cds.MS.gene013665.t1;Parent=MS.gene013665.t1
chr3.3 exon 75545461 75545628 75545461 ID=MS.gene013665.t1.exon10;Parent=MS.gene013665.t1
chr3.3 CDS 75545461 75545628 75545461 ID=cds.MS.gene013665.t1;Parent=MS.gene013665.t1
Gene Sequence

>MS.gene013665

ATGGGAAAGTGTTGGTTTGTTGGAGTGTTGTTTGTGGTGGCATATGGAAGCTTGTTGGTAACAACAATTGGGGTAGAAGGGTACCCAATTGAAGATCTAGTTGTGAAGTTGCCAGGCCAACCCAAAGTTAAATTCAGTCAATATGCTGGTTATGTTGATATAGATATAAAACATGGGAGGAGTCTCTTCTATTATTTTGTTGAGGCTGACCACCTCCCTCACAAAAAGCCTCTCACCCTATGGCTCAATGGAGGTAATAATAATAATTTTATGATGGATGCATATCATTTTTACTCTTCATTACCATGTTGTCACAAGTTTTTCCTTTTATTTAATTTCGTATGTTGATAGTATAGGTTGATGTCATTTATTTGTTCTTGTATTATTGTACTGTGTTATGTGCTTGTGTTGTATTGTCCTACTCCTAACCAAATCAGGTGGTTTTATTGTCTTTGCTAGTAGAAAATCTTACCAGCTTAACAAAATTATATCATGTATATCAAAATTGATGAATTATTTTAGCTCCTTTTTCTTTATTTTAAGATGTAGATATTTGTTAATTTTTTATAACGCCAACATCAAATTCAAATCATCTTACAAGGATCATAAATAAATTGTTCTTTATTGGAGGGGAATTAATTAAATTGGTTAATTTTCTAGGTCCGGGATGTTCCTCTATCGGAGGAGGTGCTTTTACTGAATTGGGTCCATTTTATCCTTCTGGTGATGGACGCGGTCTACGAAGAAATTCAAAGTCCTGGAATACAGGTATGTATATGACTATGAATTTGAATTCACCGTCTTCACCAAAATCTTGCTTTCATGTAGTCATTATATCTGTGAGTTTTAAGATCCAGATTAGACAAAGCAAATTTCAAGATCAAGCTTTTAGTTTTAAAAAATCTTTTTGATATGAGCACAATATGATCTCGATCTAATGATCACCGACGTTGTGACTAAATACGTGTTTTGATATTTGAGAATTATGTGGGTGTATTAATTCCTGACTTATATATTGTTCATGTCTACTCTTTTTTATAGTTTCCAATCTCCTCTTTGTGGAGTCTCCCGCTGGAGTTGGTTGGTCATACTCAAATACAACTTCTGATTATAACATTGGTGACGCCTCCACAGGTACAAAATTAGATTTGTGAGACCAAATTTATGTAGTCAATATCTATACAAAAGAATAAAAAAAAATATTTTTTGTATGTTATACATGGAATTTGTTAGTTTTATTATTAGGCATGAACATAATTTTTTAATTTGTTTTTGGCAGCCAATGACATGCTTTTGTTCCTGCTGAAATGGTACGAGAAGTTTCCTTCATACAAATCGAGGAAGTTGTTTCTTACCGGAGAAAGCTATGCAGGTCCAACAAACACAATAATCAAATTCCAAATTTAATAATTTATCGTTTCAAAATTCCAAAAATTAAATTTAGTGTCGTGGTATAAAATATTCAATTTAGCAGAGAGGATTCAGTTATATAAATTTTATATTCTTTATGCATGCACACAAAACCTATGTCATCATTTCTGGCTGAGACATACACATACACAAATGTTTAACACAAATATTTGTTCCTTAATTGTGTTCTTTTGCCTATGATCACTTGTGATCGACTTTTGTTTCTTACATACTAACATTTTCAGGACATTACATACCTCAATTAGCCAATGCCATTCTTGATTATAATGCTCATTCATCCAGTTTCAAGTTCAACATAAAAGGAGTTGCCGTAAGATCCGATTCACATGATATATTAAATTAATTCACTCACAACTATATATTTGTGCCACTTTTGGACTGATCGTGTATATTTGATGACTTATTGATTATTTAATTAAGAAATTTTGAAAGTTAATTAAACTGATCTTACTTTTCCCTTAACTTTGTTAGATTGGAAACCCACTTCTGAAAATGGATCGTGATACACAAGCAACATATGAATATTACTGGTCACACGGAATGATTTCGGATGAAATTGGTCTTGCCATTAGGAATGATTGTGATTTTGATGATCATACCCATGCAACTACTCATAACGTATCTAAATCATGCAACGAAGCCAAAAATGCCGCTAGGAAAATTGTGAGCGAGTATGTAGACAACTATGATGTGATTATTGATGTGTGTTATCCAGCTATAGCTGAACAAGAAATCAGATTGAAAAAGATGGTAACTTTTGCCTTTGGATTATTATAACTTTTGCCTTTGGATTATTATGTTCTGCCAATGATATTTTTTATTTTTTTATAATTAATTAATTAATTAATTAATTAATTTGTTTATTTCATTAATGCAGGCTACTAAAATAAGTTTAAGTGTCGATGTTTGTATAGATTATGAAAGCTTTAATTACCTCAACCTGCCTGAGGTTCAGAAGGCTCTCCATGCCAACCGTACTAATCTGCCATATCCATGGGGCATGTGTAGTGAGTAAGTATAAATAAAGCAAAAATATACTTGTTATCATGAAGTTTTACCGGGTAATAGTACCTTGTAGACAAAATTAATTTAACATTTAATTTTATTTTAAAATAATTATATATAAAAAATGACATAACTATAGATTGTATTATAAATAAATTAGAATACACACTTTGATATATAAATATTATTGGAAAAAGACAATTTCATAACTAGAGATATAATTGATATGAATGGAGTTTACAAATATAGGCAACATTCATTTTATTATAATATTGCTAAGTTAAGAATACACACTTTGTGAACTAAGTTAAGACTAACCATCAAATTTACTAGCTAGGAAACTAATATTGCTAATTTTTTTTTTTTTATAAATATATTTGAAATCTTGCCTCATATGATCATAGTAAACATGTCATTTTTGTTTTAATTTTGATTACCGAAGAAATAGCAGCTCATGTACATTTTCTTCATTGCAGTGTTTTGAATTACAGCAAGACAGATCCTTACGCTAATATGCTTCCAATTCTCAAACGGATAGTTCAAAATCATATTCCAATATGGGTTTATAGGTAGTTAATTTTAACAAATGATAATCATTTGCTATTATTTATTTTATACATTTTTGGAATAAGCCTTACCATACTTGTTAAATTATTATGATAGTGGAGACCAAGATTCAGTTGTTCCATTACTAGGTTCTCGAACACTCATTCGTGAACTAGCTCATGACCTGAAATTCAAGATTACAGACTCATATAGAGTTTGGTTCCACAAAGGGCAGGTAAATATATATTTTTATTAACAATTAACCTAATTTTTTTGCATATTGAAAATTGATTTGAGTATGGATTTCGCAATTTTATTAACTCATGTTTCTAAAAAATTAATGCATGTGTAGGCTGGAGGTTGGGTAACTGAGTATGGAAATTTGTTGACTTTCGCCACTGTAAGAGGAGCGGGTCACATGGTGCCATATGGACAACCTTCTAGGGCATTACATCTATTCAGCTCCTTTGTGCATGGAAAGAGATTGCCAAACACTACTAAACCCTCAATTGGAGAATGA
Protein sequence

>MS.gene013665.t1

MGKCWFVGVLFVVAYGSLLVTTIGVEGYPIEDLVVKLPGQPKVKFSQYAGYVDIDIKHGRSLFYYFVEADHLPHKKPLTLWLNGGPGCSSIGGGAFTELGPFYPSGDGRGLRRNSKSWNTVSNLLFVESPAGVGWSYSNTTSDYNIGDASTANDMLLFLLKWYEKFPSYKSRKLFLTGESYAGHYIPQLANAILDYNAHSSSFKFNIKGVAIGNPLLKMDRDTQATYEYYWSHGMISDEIGLAIRNDCDFDDHTHATTHNVSKSCNEAKNAARKIVSEYVDNYDVIIDVCYPAIAEQEIRLKKMATKISLSVDVCIDYESFNYLNLPEVQKALHANRTNLPYPWGMCSDVLNYSKTDPYANMLPILKRIVQNHIPIWVYSGDQDSVVPLLGSRTLIRELAHDLKFKITDSYRVWFHKGQAGGWVTEYGNLLTFATVRGAGHMVPYGQPSRALHLFSSFVHGKRLPNTTKPSIGE