Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013921.t1 | XP_003624857.2 | 96.7 | 459 | 9 | 1 | 1 | 453 | 1 | 459 | 1.40E-263 | 918.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013921.t1 | Q9M1K5 | 51.0 | 463 | 179 | 7 | 19 | 447 | 4 | 452 | 5.2e-126 | 452.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013921.t1 | G7L4R1 | 96.7 | 459 | 9 | 1 | 1 | 453 | 1 | 459 | 1.0e-263 | 918.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene013921 | MS.gene51623 | PPI |
MS.gene49091 | MS.gene013921 | PPI |
MS.gene013921 | MS.gene56252 | PPI |
MS.gene013921 | MS.gene41434 | PPI |
MS.gene013921 | MS.gene34495 | PPI |
MS.gene009450 | MS.gene013921 | PPI |
MS.gene006293 | MS.gene013921 | PPI |
MS.gene84379 | MS.gene013921 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013921.t1 | MTR_7g088350 | 96.732 | 459 | 9 | 1 | 1 | 453 | 1 | 459 | 0.0 | 922 |
MS.gene013921.t1 | MTR_7g088360 | 58.038 | 367 | 145 | 3 | 20 | 384 | 24 | 383 | 1.36e-153 | 442 |
MS.gene013921.t1 | MTR_1g098390 | 50.440 | 341 | 150 | 5 | 21 | 349 | 1 | 334 | 5.44e-116 | 347 |
MS.gene013921.t1 | MTR_6g033315 | 50.292 | 342 | 145 | 6 | 26 | 356 | 21 | 348 | 1.06e-110 | 333 |
MS.gene013921.t1 | MTR_3g098840 | 50.962 | 312 | 139 | 4 | 16 | 321 | 12 | 315 | 1.82e-103 | 315 |
MS.gene013921.t1 | MTR_7g083480 | 48.663 | 374 | 171 | 6 | 25 | 389 | 20 | 381 | 3.16e-103 | 314 |
MS.gene013921.t1 | MTR_6g038020 | 50.000 | 304 | 142 | 3 | 24 | 321 | 2 | 301 | 1.72e-100 | 307 |
MS.gene013921.t1 | MTR_6g038020 | 51.195 | 293 | 133 | 3 | 35 | 321 | 16 | 304 | 2.39e-100 | 306 |
MS.gene013921.t1 | MTR_7g114080 | 36.691 | 139 | 69 | 2 | 163 | 283 | 160 | 297 | 6.42e-22 | 97.4 |
MS.gene013921.t1 | MTR_1g094610 | 30.942 | 223 | 106 | 7 | 96 | 303 | 57 | 246 | 1.90e-21 | 94.4 |
MS.gene013921.t1 | MTR_4g021795 | 29.435 | 248 | 121 | 10 | 84 | 307 | 46 | 263 | 4.25e-21 | 93.6 |
MS.gene013921.t1 | MTR_7g114080 | 35.135 | 148 | 68 | 4 | 163 | 283 | 160 | 306 | 2.80e-20 | 92.8 |
MS.gene013921.t1 | MTR_5g023230 | 35.256 | 156 | 93 | 2 | 157 | 305 | 142 | 296 | 1.42e-19 | 89.7 |
MS.gene013921.t1 | MTR_5g023230 | 35.256 | 156 | 93 | 2 | 157 | 305 | 162 | 316 | 1.94e-19 | 89.7 |
MS.gene013921.t1 | MTR_4g116160 | 29.771 | 262 | 146 | 10 | 93 | 336 | 321 | 562 | 1.20e-18 | 89.0 |
MS.gene013921.t1 | MTR_4g116160 | 29.771 | 262 | 146 | 10 | 93 | 336 | 148 | 389 | 1.98e-18 | 87.8 |
MS.gene013921.t1 | MTR_7g114080 | 34.965 | 143 | 65 | 4 | 163 | 278 | 160 | 301 | 5.07e-18 | 85.1 |
MS.gene013921.t1 | MTR_1g112830 | 29.545 | 220 | 123 | 5 | 93 | 303 | 414 | 610 | 6.29e-18 | 87.0 |
MS.gene013921.t1 | MTR_4g116160 | 30.846 | 201 | 112 | 8 | 93 | 282 | 321 | 505 | 1.19e-16 | 82.4 |
MS.gene013921.t1 | MTR_4g092760 | 28.216 | 241 | 128 | 9 | 85 | 303 | 303 | 520 | 1.86e-16 | 82.0 |
MS.gene013921.t1 | MTR_4g092760 | 32.704 | 159 | 88 | 5 | 163 | 303 | 274 | 431 | 5.36e-16 | 80.5 |
MS.gene013921.t1 | MTR_7g114080 | 54.237 | 59 | 27 | 0 | 163 | 221 | 160 | 218 | 1.41e-15 | 77.8 |
MS.gene013921.t1 | MTR_4g023760 | 27.315 | 216 | 136 | 6 | 94 | 302 | 60 | 261 | 1.73e-14 | 74.3 |
MS.gene013921.t1 | MTR_5g023230 | 41.270 | 63 | 37 | 0 | 159 | 221 | 164 | 226 | 2.73e-13 | 70.1 |
MS.gene013921.t1 | MTR_7g118050 | 37.113 | 97 | 49 | 2 | 111 | 206 | 83 | 168 | 3.71e-13 | 68.9 |
MS.gene013921.t1 | MTR_7g118050 | 37.113 | 97 | 49 | 2 | 111 | 206 | 83 | 168 | 4.48e-13 | 70.1 |
MS.gene013921.t1 | MTR_4g082560 | 30.534 | 131 | 75 | 2 | 164 | 278 | 180 | 310 | 7.08e-13 | 71.2 |
MS.gene013921.t1 | MTR_5g042870 | 30.534 | 131 | 75 | 3 | 164 | 278 | 180 | 310 | 6.79e-12 | 68.2 |
MS.gene013921.t1 | MTR_1g085980 | 27.068 | 133 | 81 | 2 | 162 | 278 | 155 | 287 | 2.57e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013921.t1 | AT3G56930 | 62.155 | 362 | 124 | 5 | 19 | 369 | 4 | 363 | 1.60e-165 | 475 |
MS.gene013921.t1 | AT3G56930 | 57.584 | 356 | 114 | 6 | 19 | 369 | 4 | 327 | 6.92e-144 | 419 |
MS.gene013921.t1 | AT5G05070 | 52.217 | 406 | 169 | 8 | 1 | 393 | 6 | 399 | 1.91e-141 | 411 |
MS.gene013921.t1 | AT2G40990 | 54.775 | 356 | 145 | 7 | 1 | 348 | 1 | 348 | 5.80e-128 | 377 |
MS.gene013921.t1 | AT3G56920 | 51.754 | 342 | 152 | 5 | 17 | 355 | 2 | 333 | 6.98e-120 | 353 |
MS.gene013921.t1 | AT3G26935 | 50.289 | 346 | 150 | 6 | 25 | 356 | 19 | 356 | 4.20e-115 | 345 |
MS.gene013921.t1 | AT4G24630 | 43.817 | 372 | 183 | 7 | 24 | 382 | 3 | 361 | 9.49e-109 | 328 |
MS.gene013921.t1 | AT5G50020 | 50.329 | 304 | 137 | 4 | 25 | 321 | 4 | 300 | 5.94e-108 | 326 |
MS.gene013921.t1 | AT5G50020 | 50.329 | 304 | 137 | 4 | 25 | 321 | 34 | 330 | 1.22e-107 | 326 |
MS.gene013921.t1 | AT5G41060 | 49.704 | 338 | 143 | 7 | 25 | 351 | 19 | 340 | 2.99e-107 | 324 |
MS.gene013921.t1 | AT5G41060 | 49.541 | 327 | 138 | 7 | 36 | 351 | 15 | 325 | 2.84e-101 | 308 |
MS.gene013921.t1 | AT3G48760 | 49.408 | 338 | 146 | 6 | 25 | 351 | 28 | 351 | 6.04e-101 | 310 |
MS.gene013921.t1 | AT5G50020 | 48.355 | 304 | 136 | 5 | 25 | 321 | 4 | 293 | 1.19e-100 | 307 |
MS.gene013921.t1 | AT5G41060 | 52.190 | 274 | 108 | 6 | 89 | 351 | 12 | 273 | 5.25e-92 | 282 |
MS.gene013921.t1 | AT5G41060 | 52.190 | 274 | 108 | 6 | 89 | 351 | 12 | 273 | 5.25e-92 | 282 |
MS.gene013921.t1 | AT3G04970 | 32.653 | 147 | 73 | 2 | 163 | 283 | 73 | 219 | 3.39e-18 | 85.5 |
MS.gene013921.t1 | AT3G09320 | 31.746 | 189 | 105 | 7 | 140 | 307 | 69 | 254 | 5.05e-18 | 84.7 |
MS.gene013921.t1 | AT3G51390 | 35.465 | 172 | 96 | 5 | 142 | 304 | 143 | 308 | 1.38e-17 | 84.3 |
MS.gene013921.t1 | AT3G51390 | 35.465 | 172 | 96 | 5 | 142 | 304 | 138 | 303 | 1.61e-17 | 84.0 |
MS.gene013921.t1 | AT3G04970 | 32.653 | 147 | 73 | 2 | 163 | 283 | 160 | 306 | 3.68e-17 | 83.6 |
MS.gene013921.t1 | AT2G14255 | 31.646 | 158 | 81 | 5 | 163 | 298 | 363 | 515 | 8.23e-17 | 83.2 |
MS.gene013921.t1 | AT5G04270 | 31.293 | 147 | 92 | 4 | 140 | 280 | 68 | 211 | 8.28e-17 | 80.9 |
MS.gene013921.t1 | AT3G04970 | 55.932 | 59 | 26 | 0 | 163 | 221 | 160 | 218 | 2.09e-16 | 80.5 |
MS.gene013921.t1 | AT5G20350 | 28.326 | 233 | 127 | 9 | 92 | 303 | 315 | 528 | 1.38e-15 | 79.7 |
MS.gene013921.t1 | AT4G22750 | 32.450 | 151 | 92 | 3 | 162 | 305 | 115 | 262 | 1.76e-13 | 71.2 |
MS.gene013921.t1 | AT1G69420 | 30.534 | 131 | 75 | 2 | 164 | 278 | 164 | 294 | 2.82e-13 | 72.4 |
MS.gene013921.t1 | AT1G69420 | 30.534 | 131 | 75 | 2 | 164 | 278 | 164 | 294 | 2.82e-13 | 72.4 |
MS.gene013921.t1 | AT3G60800 | 26.977 | 215 | 127 | 6 | 94 | 289 | 62 | 265 | 3.07e-13 | 70.9 |
MS.gene013921.t1 | AT3G18620 | 40.789 | 76 | 38 | 2 | 156 | 224 | 141 | 216 | 1.43e-11 | 66.2 |
MS.gene013921.t1 | AT4G00840 | 48.837 | 43 | 22 | 0 | 164 | 206 | 112 | 154 | 5.18e-11 | 62.8 |
MS.gene013921.t1 | AT4G00840 | 48.837 | 43 | 22 | 0 | 164 | 206 | 112 | 154 | 8.64e-11 | 63.2 |
Find 114 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTATTCCTCCTCTTGACTTC+TGG | 0.152547 | 7.1:+17916115 | MS.gene013921:CDS |
CCTTCTATGGAGTGGATTAA+TGG | 0.203993 | 7.1:+17916208 | MS.gene013921:CDS |
CAAATTGGGTCTTCTCCTTC+TGG | 0.208011 | 7.1:+17914868 | MS.gene013921:CDS |
GGGTTCAATTCTTACTATTC+TGG | 0.211772 | 7.1:+17915938 | MS.gene013921:CDS |
AGGAGTAGAAATTCTCAAAT+TGG | 0.237451 | 7.1:+17914853 | MS.gene013921:CDS |
CAAGGAGGCTTTATCAAGTT+TGG | 0.260253 | 7.1:+17914914 | MS.gene013921:CDS |
TATTCCTCCTCTTGACTTCT+GGG | 0.268341 | 7.1:+17916116 | MS.gene013921:CDS |
TAATATACCTACTCCTTCTA+TGG | 0.276316 | 7.1:+17916195 | MS.gene013921:CDS |
CTTAGTGATCCCTTATTGTA+TGG | 0.289210 | 7.1:-17917154 | None:intergenic |
TTTATTTCATCAACAGTAAC+AGG | 0.289773 | 7.1:-17917586 | None:intergenic |
TTCATTGCTGTCTGGTTTGT+TGG | 0.298614 | 7.1:+17916918 | MS.gene013921:CDS |
CTATCTCATTTGTACAAATC+AGG | 0.303428 | 7.1:+17916962 | MS.gene013921:CDS |
GTTACTGTTGATGAAATAAA+TGG | 0.304437 | 7.1:+17917589 | MS.gene013921:CDS |
TCAAAATTTCGCAGAAGTTC+GGG | 0.308835 | 7.1:-17917367 | None:intergenic |
AAAAGGGAACCCATACAATA+AGG | 0.310666 | 7.1:+17917144 | MS.gene013921:CDS |
ATTCATTGAAGCAGGAATAC+TGG | 0.316448 | 7.1:-17917200 | None:intergenic |
AAGGGATCACTAAGAAATAT+TGG | 0.322000 | 7.1:+17917163 | MS.gene013921:CDS |
GGAGAAAATTGATGTTGAAA+TGG | 0.325187 | 7.1:+17917309 | MS.gene013921:CDS |
ATCAAAATTTCGCAGAAGTT+CGG | 0.336374 | 7.1:-17917368 | None:intergenic |
TTTCGCAGAAGTTCGGGAAT+TGG | 0.339620 | 7.1:-17917361 | None:intergenic |
AAAATCCCGTCCGCCATATT+CGG | 0.340021 | 7.1:-17917277 | None:intergenic |
CTGTGACTTCGAATCCAGTA+TGG | 0.341832 | 7.1:-17917549 | None:intergenic |
GGGTCTTCTCCTTCTGGAGG+TGG | 0.343224 | 7.1:+17914874 | MS.gene013921:CDS |
GGTCTTCTCCTTCTGGAGGT+GGG | 0.343695 | 7.1:+17914875 | MS.gene013921:CDS |
GCCTCCTTGGTTTCATATCA+TGG | 0.345991 | 7.1:-17914900 | None:intergenic |
AATCTTCGATTGCGATACTA+TGG | 0.363590 | 7.1:-17917501 | None:intergenic |
CAATTGCAGGTGCAGCAATT+AGG | 0.368777 | 7.1:-17915830 | None:intergenic |
TTGACTTCTGGGAGAGATCC+TGG | 0.384915 | 7.1:+17916127 | MS.gene013921:CDS |
GAGAAAATTGATGTTGAAAT+GGG | 0.385547 | 7.1:+17917310 | MS.gene013921:CDS |
CAGAAGTCAAGAGGAGGAAT+AGG | 0.388682 | 7.1:-17916114 | None:intergenic |
AAAGACATATAGGCACAAAA+TGG | 0.393707 | 7.1:-17916808 | None:intergenic |
ATTTCTCTGTGGTGGGAGAC+TGG | 0.395795 | 7.1:+17915767 | MS.gene013921:CDS |
GAATTTCTCGGGATAATTCC+AGG | 0.395988 | 7.1:-17916145 | None:intergenic |
TTGCTGTCTGGTTTGTTGGT+GGG | 0.396543 | 7.1:+17916922 | MS.gene013921:CDS |
GGAGTAGAAATTCTCAAATT+GGG | 0.397763 | 7.1:+17914854 | MS.gene013921:CDS |
TATACTGCTTCATTGCTGTC+TGG | 0.401701 | 7.1:+17916910 | MS.gene013921:CDS |
GTCTTCTCCTTCTGGAGGTG+GGG | 0.403108 | 7.1:+17914876 | MS.gene013921:CDS |
TCCGTTTGTAGCTCCCATAC+TGG | 0.403795 | 7.1:+17917535 | MS.gene013921:CDS |
CCATTAATCCACTCCATAGA+AGG | 0.409197 | 7.1:-17916208 | None:intergenic |
TTTCCGATCGTTTGTACAGC+AGG | 0.411571 | 7.1:+17917225 | MS.gene013921:CDS |
TGGTGTCCTGTAGTGATTGT+GGG | 0.411788 | 7.1:+17915918 | MS.gene013921:CDS |
AGGATGAACATACGATGGTT+GGG | 0.421229 | 7.1:+17917245 | MS.gene013921:CDS |
AAAGGGAACCCATACAATAA+GGG | 0.423938 | 7.1:+17917145 | MS.gene013921:CDS |
CAAACTTGATAAAGCCTCCT+TGG | 0.424084 | 7.1:-17914913 | None:intergenic |
AAGCATGAGAAGGCCAATAA+TGG | 0.431532 | 7.1:+17915882 | MS.gene013921:CDS |
CATCAACAGTAACAGGCCTT+TGG | 0.433305 | 7.1:-17917579 | None:intergenic |
TTGATGTTGAAATGGGATCT+AGG | 0.436013 | 7.1:+17917317 | MS.gene013921:CDS |
TTAACACAAAATGCAATTGC+AGG | 0.437269 | 7.1:-17915843 | None:intergenic |
CCCTGGGTTGGCCAGTGCAT+TGG | 0.444013 | 7.1:+17916391 | MS.gene013921:CDS |
TTAGTGATCCCTTATTGTAT+GGG | 0.448014 | 7.1:-17917153 | None:intergenic |
TTGTACAAATGAGATAGAAA+TGG | 0.448341 | 7.1:-17916956 | None:intergenic |
ATTCAGAGATTTCTCTGTGG+TGG | 0.449321 | 7.1:+17915759 | MS.gene013921:intron |
AAGAGAACACAAAGACATAT+AGG | 0.450100 | 7.1:-17916818 | None:intergenic |
TCTGGAGGTGTTGAATTTCT+CGG | 0.454032 | 7.1:-17916157 | None:intergenic |
TCCAATGCACTGGCCAACCC+AGG | 0.454039 | 7.1:-17916392 | None:intergenic |
CGGAAATTATTCATTGAAGC+AGG | 0.460924 | 7.1:-17917208 | None:intergenic |
CTGGAGGTGTTGAATTTCTC+GGG | 0.461477 | 7.1:-17916156 | None:intergenic |
GATTTGATCATCACTGCCCC+TGG | 0.464384 | 7.1:+17916374 | MS.gene013921:CDS |
ATTGCTGTCTGGTTTGTTGG+TGG | 0.467541 | 7.1:+17916921 | MS.gene013921:CDS |
AAACTGTAGCAACAGATGTT+CGG | 0.467884 | 7.1:-17917471 | None:intergenic |
GGCAGTGATGATCAAATCTC+TGG | 0.471201 | 7.1:-17916369 | None:intergenic |
AGAATTTCTACTCCTAATCA+TGG | 0.474483 | 7.1:-17914845 | None:intergenic |
TTCAGAGATTTCTCTGTGGT+GGG | 0.489294 | 7.1:+17915760 | MS.gene013921:intron |
GTGGTGGTGCTGCCATGATT+AGG | 0.495235 | 7.1:+17914833 | None:intergenic |
ACTAAAGATGTACTTGTGAA+TGG | 0.496836 | 7.1:+17916259 | MS.gene013921:CDS |
GACTTACTCTTCCAATGCAC+TGG | 0.501355 | 7.1:-17916402 | None:intergenic |
GATCATCACTGCCCCTGGGT+TGG | 0.502356 | 7.1:+17916379 | MS.gene013921:CDS |
CAGGATGAACATACGATGGT+TGG | 0.506939 | 7.1:+17917244 | MS.gene013921:CDS |
CTTTATCAAGTTTGGAGGGG+TGG | 0.514074 | 7.1:+17914922 | MS.gene013921:CDS |
TTAAACGCGTCATCATAGTC+TGG | 0.516699 | 7.1:-17916175 | None:intergenic |
TCCAGTATGGGAGCTACAAA+CGG | 0.522058 | 7.1:-17917536 | None:intergenic |
TCTTCCTCAACACTGTAGAA+TGG | 0.522397 | 7.1:-17917433 | None:intergenic |
CCTCCTTGGTTTCATATCAT+GGG | 0.523702 | 7.1:-17914899 | None:intergenic |
GGAGGCTTTATCAAGTTTGG+AGG | 0.531163 | 7.1:+17914917 | MS.gene013921:CDS |
AGACAACTTACGAGAACTTC+CGG | 0.531741 | 7.1:+17917107 | MS.gene013921:intron |
ATTGAACCCACAATCACTAC+AGG | 0.531854 | 7.1:-17915924 | None:intergenic |
GGATGAACATACGATGGTTG+GGG | 0.536653 | 7.1:+17917246 | MS.gene013921:CDS |
TTGGTGTCCTGTAGTGATTG+TGG | 0.545254 | 7.1:+17915917 | MS.gene013921:CDS |
CCAATGCACTGGCCAACCCA+GGG | 0.545845 | 7.1:-17916391 | None:intergenic |
ACAAGTACATCTTTAGTTCG+AGG | 0.546361 | 7.1:-17916253 | None:intergenic |
GAGGCTTTATCAAGTTTGGA+GGG | 0.560368 | 7.1:+17914918 | MS.gene013921:CDS |
TGACTCCGAATATGGCGGAC+GGG | 0.567397 | 7.1:+17917272 | MS.gene013921:CDS |
TACCTACTCCTTCTATGGAG+TGG | 0.568209 | 7.1:+17916200 | MS.gene013921:CDS |
AGAAACAAGGAAGCTACGTC+AGG | 0.568313 | 7.1:-17915798 | None:intergenic |
ATTGGGTCTTCTCCTTCTGG+AGG | 0.577249 | 7.1:+17914871 | MS.gene013921:CDS |
ATTTGATCATCACTGCCCCT+GGG | 0.579993 | 7.1:+17916375 | MS.gene013921:CDS |
TGATCCATTCTACAGTGTTG+AGG | 0.585981 | 7.1:+17917429 | MS.gene013921:CDS |
AATCTCACATGATTATGTAT+CGG | 0.591027 | 7.1:+17916875 | MS.gene013921:CDS |
CATCCTGCTGTACAAACGAT+CGG | 0.600230 | 7.1:-17917228 | None:intergenic |
TGTGACTTCGAATCCAGTAT+GGG | 0.601594 | 7.1:-17917548 | None:intergenic |
ACATGCTGCAGCGAAACTAT+CGG | 0.601927 | 7.1:+17916757 | MS.gene013921:intron |
TCTAGGCGTGCGGACGACGG+TGG | 0.612392 | 7.1:+17917334 | MS.gene013921:CDS |
GGATCTAGGCGTGCGGACGA+CGG | 0.613270 | 7.1:+17917331 | MS.gene013921:CDS |
GATCTCTCCCAGAAGTCAAG+AGG | 0.619886 | 7.1:-17916123 | None:intergenic |
TCTTAAAGCAAAGCATGAGA+AGG | 0.627068 | 7.1:+17915872 | MS.gene013921:CDS |
TTGACTCCGAATATGGCGGA+CGG | 0.628645 | 7.1:+17917271 | MS.gene013921:CDS |
TCATGGGCCCCACCTCCAGA+AGG | 0.629771 | 7.1:-17914883 | None:intergenic |
CTCTCCCAGAAGTCAAGAGG+AGG | 0.632631 | 7.1:-17916120 | None:intergenic |
TGTACTTGTGAATGGTCATA+CGG | 0.637970 | 7.1:+17916267 | MS.gene013921:CDS |
TTCATTCAGAGATTTCTCTG+TGG | 0.644118 | 7.1:+17915756 | MS.gene013921:intron |
GGGTTTGACTCCGAATATGG+CGG | 0.656520 | 7.1:+17917267 | MS.gene013921:CDS |
GATGAACATACGATGGTTGG+GGG | 0.658611 | 7.1:+17917247 | MS.gene013921:CDS |
TAGGAATGTTGTAAGAAACA+AGG | 0.661120 | 7.1:-17915811 | None:intergenic |
AAGTCACAGAATCTGACCAA+AGG | 0.663763 | 7.1:+17917563 | MS.gene013921:CDS |
AGGCTTTATCAAGTTTGGAG+GGG | 0.664522 | 7.1:+17914919 | MS.gene013921:CDS |
ATCCACTCCATAGAAGGAGT+AGG | 0.669098 | 7.1:-17916202 | None:intergenic |
CAATGCACTGGCCAACCCAG+GGG | 0.671362 | 7.1:-17916390 | None:intergenic |
AACGCGTCATCATAGTCTGG+AGG | 0.679478 | 7.1:-17916172 | None:intergenic |
GGGCCCATGATATGAAACCA+AGG | 0.692194 | 7.1:+17914896 | MS.gene013921:CDS |
TGAAATGGGATCTAGGCGTG+CGG | 0.733455 | 7.1:+17917324 | MS.gene013921:CDS |
CCCATGATATGAAACCAAGG+AGG | 0.760492 | 7.1:+17914899 | MS.gene013921:CDS |
ACAGCAGGATGAACATACGA+TGG | 0.764138 | 7.1:+17917240 | MS.gene013921:CDS |
GAACAATGAGAAGTACGAGG+CGG | 0.774033 | 7.1:-17916328 | None:intergenic |
ATAGAACAATGAGAAGTACG+AGG | 0.782052 | 7.1:-17916331 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGTTAAAACTGATATATA+AGG | + | chr7.1:17916071-17916090 | MS.gene013921:intron | 15.0% |
!!! | AAAAATTGGTTTTTTGTAAA+TGG | + | chr7.1:17915008-17915027 | MS.gene013921:intron | 15.0% |
!!! | AAGAATATTTTTATGCTATT+TGG | + | chr7.1:17916507-17916526 | MS.gene013921:intron | 15.0% |
!!! | AGAATATTTTTATGCTATTT+GGG | + | chr7.1:17916508-17916527 | MS.gene013921:intron | 15.0% |
!!! | ATTTTGTAATTAAACTTTTG+TGG | + | chr7.1:17915409-17915428 | MS.gene013921:intron | 15.0% |
!! | AAACAACATATTAACACAAA+AGG | - | chr7.1:17915143-17915162 | None:intergenic | 20.0% |
!! | AACTAACAATCAAAACAAAA+AGG | - | chr7.1:17914974-17914993 | None:intergenic | 20.0% |
!! | ACGTAAAAAAAACTTTCAAA+TGG | - | chr7.1:17915666-17915685 | None:intergenic | 20.0% |
!! | CTTAATTATGACGTAAAAAT+TGG | + | chr7.1:17914994-17915013 | MS.gene013921:intron | 20.0% |
!! | GGTATCAATATGATAAAAAA+GGG | + | chr7.1:17917128-17917147 | MS.gene013921:CDS | 20.0% |
!!! | CTTTTTTATCATATTGATAC+CGG | - | chr7.1:17917129-17917148 | None:intergenic | 20.0% |
!!! | TAAGTATATGTTTGATTTTG+CGG | + | chr7.1:17915259-17915278 | MS.gene013921:intron | 20.0% |
!!! | TTTTGATTTTGATAGTTTTG+AGG | + | chr7.1:17917384-17917403 | MS.gene013921:CDS | 20.0% |
!!! | TTTTTTTTACGTTGTTGTAT+TGG | + | chr7.1:17915674-17915693 | MS.gene013921:intron | 20.0% |
! | AAAAAGATGATCACCATTAT+TGG | - | chr7.1:17915898-17915917 | None:intergenic | 25.0% |
! | AAAATGAAATGGAGAAGATA+TGG | - | chr7.1:17916714-17916733 | None:intergenic | 25.0% |
! | AAATGTCTTCTATGTTTGTT+TGG | + | chr7.1:17916635-17916654 | MS.gene013921:intron | 25.0% |
! | AATCTCACATGATTATGTAT+CGG | + | chr7.1:17916875-17916894 | MS.gene013921:CDS | 25.0% |
! | AATGAAGGGAACAAAAAAAA+AGG | - | chr7.1:17915742-17915761 | None:intergenic | 25.0% |
! | AGTTCTTGTAGAAAATGAAA+TGG | - | chr7.1:17916725-17916744 | None:intergenic | 25.0% |
! | CATTTAAATAAACACGAGAA+TGG | - | chr7.1:17915502-17915521 | None:intergenic | 25.0% |
! | CGGTATCAATATGATAAAAA+AGG | + | chr7.1:17917127-17917146 | MS.gene013921:CDS | 25.0% |
! | GAAAAATGTTCCAATTTAAG+TGG | - | chr7.1:17915572-17915591 | None:intergenic | 25.0% |
! | GAGAAAATTGATGTTGAAAT+GGG | + | chr7.1:17917310-17917329 | MS.gene013921:CDS | 25.0% |
! | TTATCATTGTAAGCAAACAT+CGG | - | chr7.1:17915242-17915261 | None:intergenic | 25.0% |
! | TTGTACAAATGAGATAGAAA+TGG | - | chr7.1:17916959-17916978 | None:intergenic | 25.0% |
! | TTTATTTCATCAACAGTAAC+AGG | - | chr7.1:17917589-17917608 | None:intergenic | 25.0% |
!! | AAATTGGAACATTTTTCTTG+TGG | + | chr7.1:17915575-17915594 | MS.gene013921:intron | 25.0% |
!! | ATCTTTCACAGAAAGATTTT+TGG | + | chr7.1:17916847-17916866 | MS.gene013921:CDS | 25.0% |
!! | GTTACTGTTGATGAAATAAA+TGG | + | chr7.1:17917589-17917608 | MS.gene013921:CDS | 25.0% |
!! | TCTTTCACAGAAAGATTTTT+GGG | + | chr7.1:17916848-17916867 | MS.gene013921:CDS | 25.0% |
!! | TTGTTAAGGTAATGATGTTT+TGG | + | chr7.1:17915169-17915188 | MS.gene013921:intron | 25.0% |
!!! | ATAATGGTGATCATCTTTTT+TGG | + | chr7.1:17915898-17915917 | MS.gene013921:CDS | 25.0% |
!!! | TGTTGTTTTTCTTGTTGTTA+AGG | + | chr7.1:17915155-17915174 | MS.gene013921:intron | 25.0% |
AAAGACATATAGGCACAAAA+TGG | - | chr7.1:17916811-17916830 | None:intergenic | 30.0% | |
AAGAGAACACAAAGACATAT+AGG | - | chr7.1:17916821-17916840 | None:intergenic | 30.0% | |
AAGGGATCACTAAGAAATAT+TGG | + | chr7.1:17917163-17917182 | MS.gene013921:CDS | 30.0% | |
ACTAAAGATGTACTTGTGAA+TGG | + | chr7.1:17916259-17916278 | MS.gene013921:CDS | 30.0% | |
AGGAGTAGAAATTCTCAAAT+TGG | + | chr7.1:17914853-17914872 | MS.gene013921:CDS | 30.0% | |
ATCAAAATTTCGCAGAAGTT+CGG | - | chr7.1:17917371-17917390 | None:intergenic | 30.0% | |
CAATAAGACAAAACATGTGA+TGG | - | chr7.1:17917051-17917070 | None:intergenic | 30.0% | |
CTATCTCATTTGTACAAATC+AGG | + | chr7.1:17916962-17916981 | MS.gene013921:CDS | 30.0% | |
GAGCAAATATAGCATATCTT+TGG | - | chr7.1:17915345-17915364 | None:intergenic | 30.0% | |
GGAGAAAATTGATGTTGAAA+TGG | + | chr7.1:17917309-17917328 | MS.gene013921:CDS | 30.0% | |
GGAGTAGAAATTCTCAAATT+GGG | + | chr7.1:17914854-17914873 | MS.gene013921:CDS | 30.0% | |
GTAAAATGAGAAACTGTTGA+AGG | - | chr7.1:17915970-17915989 | None:intergenic | 30.0% | |
TAATATACCTACTCCTTCTA+TGG | + | chr7.1:17916195-17916214 | MS.gene013921:CDS | 30.0% | |
TAGAAACAGAGATTTGATCA+TGG | + | chr7.1:17916454-17916473 | MS.gene013921:intron | 30.0% | |
TAGGAATGTTGTAAGAAACA+AGG | - | chr7.1:17915814-17915833 | None:intergenic | 30.0% | |
TCCATGATATCAAAACATTG+TGG | - | chr7.1:17915531-17915550 | None:intergenic | 30.0% | |
TTAACACAAAATGCAATTGC+AGG | - | chr7.1:17915846-17915865 | None:intergenic | 30.0% | |
TTAGTGATCCCTTATTGTAT+GGG | - | chr7.1:17917156-17917175 | None:intergenic | 30.0% | |
TTTACGTTGTTGTATTGGAT+TGG | + | chr7.1:17915679-17915698 | MS.gene013921:intron | 30.0% | |
! | CATCACATGTTTTGTCTTAT+TGG | + | chr7.1:17917049-17917068 | MS.gene013921:intron | 30.0% |
! | CTTTTTGTTGCATTAACACA+TGG | - | chr7.1:17916490-17916509 | None:intergenic | 30.0% |
! | TCAACATCAATTTTCTCCTT+TGG | - | chr7.1:17917307-17917326 | None:intergenic | 30.0% |
!!! | TCCACAATGTTTTGATATCA+TGG | + | chr7.1:17915527-17915546 | MS.gene013921:intron | 30.0% |
!!! | TTCGAGGTAGTTTTAAATGA+GGG | - | chr7.1:17916240-17916259 | None:intergenic | 30.0% |
!!! | TTTGTTTGGCTTGGTTTTAT+TGG | + | chr7.1:17916649-17916668 | MS.gene013921:intron | 30.0% |
AAAAGGGAACCCATACAATA+AGG | + | chr7.1:17917144-17917163 | MS.gene013921:CDS | 35.0% | |
AAACTGTAGCAACAGATGTT+CGG | - | chr7.1:17917474-17917493 | None:intergenic | 35.0% | |
AAAGGGAACCCATACAATAA+GGG | + | chr7.1:17917145-17917164 | MS.gene013921:CDS | 35.0% | |
AATCTTCGATTGCGATACTA+TGG | - | chr7.1:17917504-17917523 | None:intergenic | 35.0% | |
AATTACCAACTTCAGTCAAG+AGG | - | chr7.1:17916556-17916575 | None:intergenic | 35.0% | |
ACAGAGAAATCTCTGAATGA+AGG | - | chr7.1:17915757-17915776 | None:intergenic | 35.0% | |
ATTCATTGAAGCAGGAATAC+TGG | - | chr7.1:17917203-17917222 | None:intergenic | 35.0% | |
ATTTACCTCTTGACTGAAGT+TGG | + | chr7.1:17916548-17916567 | MS.gene013921:intron | 35.0% | |
CAGAGAAATCTCTGAATGAA+GGG | - | chr7.1:17915756-17915775 | None:intergenic | 35.0% | |
CGGAAATTATTCATTGAAGC+AGG | - | chr7.1:17917211-17917230 | None:intergenic | 35.0% | |
CTTAGTGATCCCTTATTGTA+TGG | - | chr7.1:17917157-17917176 | None:intergenic | 35.0% | |
GGGTTCAATTCTTACTATTC+TGG | + | chr7.1:17915938-17915957 | MS.gene013921:CDS | 35.0% | |
TCAAAATTTCGCAGAAGTTC+GGG | - | chr7.1:17917370-17917389 | None:intergenic | 35.0% | |
TCTTAAAGCAAAGCATGAGA+AGG | + | chr7.1:17915872-17915891 | MS.gene013921:CDS | 35.0% | |
TCTTCTATGTTTGTTTGGCT+TGG | + | chr7.1:17916640-17916659 | MS.gene013921:intron | 35.0% | |
TGTACTTGTGAATGGTCATA+CGG | + | chr7.1:17916267-17916286 | MS.gene013921:CDS | 35.0% | |
TTCATTCAGAGATTTCTCTG+TGG | + | chr7.1:17915756-17915775 | MS.gene013921:intron | 35.0% | |
TTGATGTTGAAATGGGATCT+AGG | + | chr7.1:17917317-17917336 | MS.gene013921:CDS | 35.0% | |
TTGCAATAGCAAGCATTAGT+CGG | - | chr7.1:17915387-17915406 | None:intergenic | 35.0% | |
! | ACAAGTACATCTTTAGTTCG+AGG | - | chr7.1:17916256-17916275 | None:intergenic | 35.0% |
! | ATAACTTTTTGTCATGGCTG+TGG | + | chr7.1:17915618-17915637 | MS.gene013921:intron | 35.0% |
! | ATAGAACAATGAGAAGTACG+AGG | - | chr7.1:17916334-17916353 | None:intergenic | 35.0% |
! | CGACGAATAACTTTTTGTCA+TGG | + | chr7.1:17915612-17915631 | MS.gene013921:intron | 35.0% |
!! | TCACAGAAAGATTTTTGGGA+TGG | + | chr7.1:17916852-17916871 | MS.gene013921:CDS | 35.0% |
!!! | GTTCGAGGTAGTTTTAAATG+AGG | - | chr7.1:17916241-17916260 | None:intergenic | 35.0% |
!!! | TCGAGGTAGTTTTAAATGAG+GGG | - | chr7.1:17916239-17916258 | None:intergenic | 35.0% |
!!! | TTTTGATAGTTTTGAGGACG+AGG | + | chr7.1:17917390-17917409 | MS.gene013921:CDS | 35.0% |
AAGCATGAGAAGGCCAATAA+TGG | + | chr7.1:17915882-17915901 | MS.gene013921:CDS | 40.0% | |
AAGTCACAGAATCTGACCAA+AGG | + | chr7.1:17917563-17917582 | MS.gene013921:CDS | 40.0% | |
AGACAACTTACGAGAACTTC+CGG | + | chr7.1:17917107-17917126 | MS.gene013921:intron | 40.0% | |
AGGATGAACATACGATGGTT+GGG | + | chr7.1:17917245-17917264 | MS.gene013921:CDS | 40.0% | |
ATAAACACGAGAATGGACGT+AGG | - | chr7.1:17915495-17915514 | None:intergenic | 40.0% | |
ATTCAGAGATTTCTCTGTGG+TGG | + | chr7.1:17915759-17915778 | MS.gene013921:intron | 40.0% | |
ATTGAACCCACAATCACTAC+AGG | - | chr7.1:17915927-17915946 | None:intergenic | 40.0% | |
CAAACTTGATAAAGCCTCCT+TGG | - | chr7.1:17914916-17914935 | None:intergenic | 40.0% | |
CCATTAATCCACTCCATAGA+AGG | - | chr7.1:17916211-17916230 | None:intergenic | 40.0% | |
CCTCCTTGGTTTCATATCAT+GGG | - | chr7.1:17914902-17914921 | None:intergenic | 40.0% | |
GAATTTCTCGGGATAATTCC+AGG | - | chr7.1:17916148-17916167 | None:intergenic | 40.0% | |
TAAACACGAGAATGGACGTA+GGG | - | chr7.1:17915494-17915513 | None:intergenic | 40.0% | |
TATAAGGCAAACTCATGTGC+AGG | + | chr7.1:17916087-17916106 | MS.gene013921:intron | 40.0% | |
TATACTGCTTCATTGCTGTC+TGG | + | chr7.1:17916910-17916929 | MS.gene013921:CDS | 40.0% | |
TATTCCTCCTCTTGACTTCT+GGG | + | chr7.1:17916116-17916135 | MS.gene013921:CDS | 40.0% | |
TCTTCCTCAACACTGTAGAA+TGG | - | chr7.1:17917436-17917455 | None:intergenic | 40.0% | |
TGATCCATTCTACAGTGTTG+AGG | + | chr7.1:17917429-17917448 | MS.gene013921:CDS | 40.0% | |
TGCTCTAATCGTAAGCTACA+AGG | - | chr7.1:17916038-17916057 | None:intergenic | 40.0% | |
TGTGACTTCGAATCCAGTAT+GGG | - | chr7.1:17917551-17917570 | None:intergenic | 40.0% | |
TTAAACGCGTCATCATAGTC+TGG | - | chr7.1:17916178-17916197 | None:intergenic | 40.0% | |
TTCAGAGATTTCTCTGTGGT+GGG | + | chr7.1:17915760-17915779 | MS.gene013921:intron | 40.0% | |
TTGATATCATGGAGCTGTTG+AGG | + | chr7.1:17915538-17915557 | MS.gene013921:intron | 40.0% | |
! | AGGCTTTATCAAGTTTGGAG+GGG | + | chr7.1:17914919-17914938 | MS.gene013921:CDS | 40.0% |
! | CAAGGAGGCTTTATCAAGTT+TGG | + | chr7.1:17914914-17914933 | MS.gene013921:CDS | 40.0% |
! | GAGGCTTTATCAAGTTTGGA+GGG | + | chr7.1:17914918-17914937 | MS.gene013921:CDS | 40.0% |
! | TTCATTGCTGTCTGGTTTGT+TGG | + | chr7.1:17916918-17916937 | MS.gene013921:CDS | 40.0% |
!! | CCTTCTATGGAGTGGATTAA+TGG | + | chr7.1:17916208-17916227 | MS.gene013921:CDS | 40.0% |
!! | TCTGGAGGTGTTGAATTTCT+CGG | - | chr7.1:17916160-17916179 | None:intergenic | 40.0% |
!! | TGCATAGCTTCGACTAGTTT+CGG | - | chr7.1:17915992-17916011 | None:intergenic | 40.0% |
AAAATCCCGTCCGCCATATT+CGG | - | chr7.1:17917280-17917299 | None:intergenic | 45.0% | |
ACAGCAGGATGAACATACGA+TGG | + | chr7.1:17917240-17917259 | MS.gene013921:CDS | 45.0% | |
ACATGCTGCAGCGAAACTAT+CGG | + | chr7.1:17916757-17916776 | MS.gene013921:intron | 45.0% | |
AGAAACAAGGAAGCTACGTC+AGG | - | chr7.1:17915801-17915820 | None:intergenic | 45.0% | |
ATCCACTCCATAGAAGGAGT+AGG | - | chr7.1:17916205-17916224 | None:intergenic | 45.0% | |
ATTTGATCATCACTGCCCCT+GGG | + | chr7.1:17916375-17916394 | MS.gene013921:CDS | 45.0% | |
CAAATTGGGTCTTCTCCTTC+TGG | + | chr7.1:17914868-17914887 | MS.gene013921:CDS | 45.0% | |
CAATTGCAGGTGCAGCAATT+AGG | - | chr7.1:17915833-17915852 | None:intergenic | 45.0% | |
CAGAAGTCAAGAGGAGGAAT+AGG | - | chr7.1:17916117-17916136 | None:intergenic | 45.0% | |
CAGGATGAACATACGATGGT+TGG | + | chr7.1:17917244-17917263 | MS.gene013921:CDS | 45.0% | |
CATCAACAGTAACAGGCCTT+TGG | - | chr7.1:17917582-17917601 | None:intergenic | 45.0% | |
CATCCTGCTGTACAAACGAT+CGG | - | chr7.1:17917231-17917250 | None:intergenic | 45.0% | |
CCCATGATATGAAACCAAGG+AGG | + | chr7.1:17914899-17914918 | MS.gene013921:CDS | 45.0% | |
CTATTCCTCCTCTTGACTTC+TGG | + | chr7.1:17916115-17916134 | MS.gene013921:CDS | 45.0% | |
CTGTGACTTCGAATCCAGTA+TGG | - | chr7.1:17917552-17917571 | None:intergenic | 45.0% | |
CTTTATCAAGTTTGGAGGGG+TGG | + | chr7.1:17914922-17914941 | MS.gene013921:CDS | 45.0% | |
GACTTACTCTTCCAATGCAC+TGG | - | chr7.1:17916405-17916424 | None:intergenic | 45.0% | |
GATGAACATACGATGGTTGG+GGG | + | chr7.1:17917247-17917266 | MS.gene013921:CDS | 45.0% | |
GCCTCCTTGGTTTCATATCA+TGG | - | chr7.1:17914903-17914922 | None:intergenic | 45.0% | |
GGAAGTTCTCGTAAGTTGTC+TGG | - | chr7.1:17917108-17917127 | None:intergenic | 45.0% | |
GGATGAACATACGATGGTTG+GGG | + | chr7.1:17917246-17917265 | MS.gene013921:CDS | 45.0% | |
GGCAGTGATGATCAAATCTC+TGG | - | chr7.1:17916372-17916391 | None:intergenic | 45.0% | |
TACCTACTCCTTCTATGGAG+TGG | + | chr7.1:17916200-17916219 | MS.gene013921:CDS | 45.0% | |
TCCAGTATGGGAGCTACAAA+CGG | - | chr7.1:17917539-17917558 | None:intergenic | 45.0% | |
TGGTGTCCTGTAGTGATTGT+GGG | + | chr7.1:17915918-17915937 | MS.gene013921:CDS | 45.0% | |
TTTCCGATCGTTTGTACAGC+AGG | + | chr7.1:17917225-17917244 | MS.gene013921:CDS | 45.0% | |
TTTCGCAGAAGTTCGGGAAT+TGG | - | chr7.1:17917364-17917383 | None:intergenic | 45.0% | |
! | GAACAATGAGAAGTACGAGG+CGG | - | chr7.1:17916331-17916350 | None:intergenic | 45.0% |
! | GGAGGCTTTATCAAGTTTGG+AGG | + | chr7.1:17914917-17914936 | MS.gene013921:CDS | 45.0% |
! | TGTCATGGCTGTGGACTTTT+AGG | + | chr7.1:17915627-17915646 | MS.gene013921:intron | 45.0% |
! | TTGGTGTCCTGTAGTGATTG+TGG | + | chr7.1:17915917-17915936 | MS.gene013921:CDS | 45.0% |
!! | ATTGCTGTCTGGTTTGTTGG+TGG | + | chr7.1:17916921-17916940 | MS.gene013921:CDS | 45.0% |
!! | CTGGAGGTGTTGAATTTCTC+GGG | - | chr7.1:17916159-17916178 | None:intergenic | 45.0% |
!! | GGTACTGGTGCCACTTAAAT+TGG | + | chr7.1:17915559-17915578 | MS.gene013921:intron | 45.0% |
!! | TTGCTGTCTGGTTTGTTGGT+GGG | + | chr7.1:17916922-17916941 | MS.gene013921:CDS | 45.0% |
!!! | GATAGTTTTGAGGACGAGGA+GGG | + | chr7.1:17917394-17917413 | MS.gene013921:CDS | 45.0% |
!!! | TGATAGTTTTGAGGACGAGG+AGG | + | chr7.1:17917393-17917412 | MS.gene013921:CDS | 45.0% |
AACGCGTCATCATAGTCTGG+AGG | - | chr7.1:17916175-17916194 | None:intergenic | 50.0% | |
ACGAGAATGGACGTAGGGAA+AGG | - | chr7.1:17915489-17915508 | None:intergenic | 50.0% | |
ATTGGGTCTTCTCCTTCTGG+AGG | + | chr7.1:17914871-17914890 | MS.gene013921:CDS | 50.0% | |
GATCTCTCCCAGAAGTCAAG+AGG | - | chr7.1:17916126-17916145 | None:intergenic | 50.0% | |
GATTTGATCATCACTGCCCC+TGG | + | chr7.1:17916374-17916393 | MS.gene013921:CDS | 50.0% | |
GGGCCCATGATATGAAACCA+AGG | + | chr7.1:17914896-17914915 | MS.gene013921:CDS | 50.0% | |
GGGTTTGACTCCGAATATGG+CGG | + | chr7.1:17917267-17917286 | MS.gene013921:CDS | 50.0% | |
TCATGGAGCTGTTGAGGTAC+TGG | + | chr7.1:17915544-17915563 | MS.gene013921:intron | 50.0% | |
TCCGTTTGTAGCTCCCATAC+TGG | + | chr7.1:17917535-17917554 | MS.gene013921:CDS | 50.0% | |
TGAAATGGGATCTAGGCGTG+CGG | + | chr7.1:17917324-17917343 | MS.gene013921:CDS | 50.0% | |
TGGGGGTTTGACTCCGAATA+TGG | + | chr7.1:17917264-17917283 | MS.gene013921:CDS | 50.0% | |
! | ATTTCTCTGTGGTGGGAGAC+TGG | + | chr7.1:17915767-17915786 | MS.gene013921:CDS | 50.0% |
! | TTGACTCCGAATATGGCGGA+CGG | + | chr7.1:17917271-17917290 | MS.gene013921:CDS | 50.0% |
! | TTGACTTCTGGGAGAGATCC+TGG | + | chr7.1:17916127-17916146 | MS.gene013921:CDS | 50.0% |
!!! | GGACGGGATTTTGACTCCAA+AGG | + | chr7.1:17917288-17917307 | MS.gene013921:CDS | 50.0% |
!!! | TGTGGTGGGAGACTGGTTTT+TGG | + | chr7.1:17915774-17915793 | MS.gene013921:CDS | 50.0% |
CGGCGCGTTCGAATCACTAA+TGG | + | chr7.1:17915279-17915298 | MS.gene013921:intron | 55.0% | |
CTCTCCCAGAAGTCAAGAGG+AGG | - | chr7.1:17916123-17916142 | None:intergenic | 55.0% | |
! | GGTCTTCTCCTTCTGGAGGT+GGG | + | chr7.1:17914875-17914894 | MS.gene013921:CDS | 55.0% |
! | GTCTTCTCCTTCTGGAGGTG+GGG | + | chr7.1:17914876-17914895 | MS.gene013921:CDS | 55.0% |
!! | TGACTCCGAATATGGCGGAC+GGG | + | chr7.1:17917272-17917291 | MS.gene013921:CDS | 55.0% |
GATCATCACTGCCCCTGGGT+TGG | + | chr7.1:17916379-17916398 | MS.gene013921:CDS | 60.0% | |
! | CAATGCACTGGCCAACCCAG+GGG | - | chr7.1:17916393-17916412 | None:intergenic | 60.0% |
! | CCAATGCACTGGCCAACCCA+GGG | - | chr7.1:17916394-17916413 | None:intergenic | 60.0% |
! | GGGTCTTCTCCTTCTGGAGG+TGG | + | chr7.1:17914874-17914893 | MS.gene013921:CDS | 60.0% |
! | TCCAATGCACTGGCCAACCC+AGG | - | chr7.1:17916395-17916414 | None:intergenic | 60.0% |
GGATCTAGGCGTGCGGACGA+CGG | + | chr7.1:17917331-17917350 | MS.gene013921:CDS | 65.0% | |
TCATGGGCCCCACCTCCAGA+AGG | - | chr7.1:17914886-17914905 | None:intergenic | 65.0% | |
!! | CCCTGGGTTGGCCAGTGCAT+TGG | + | chr7.1:17916391-17916410 | MS.gene013921:CDS | 65.0% |
TCTAGGCGTGCGGACGACGG+TGG | + | chr7.1:17917334-17917353 | MS.gene013921:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 17914847 | 17917648 | 17914847 | ID=MS.gene013921 |
chr7.1 | mRNA | 17914847 | 17917648 | 17914847 | ID=MS.gene013921.t1;Parent=MS.gene013921 |
chr7.1 | exon | 17914847 | 17914948 | 17914847 | ID=MS.gene013921.t1.exon1;Parent=MS.gene013921.t1 |
chr7.1 | CDS | 17914847 | 17914948 | 17914847 | ID=cds.MS.gene013921.t1;Parent=MS.gene013921.t1 |
chr7.1 | exon | 17915765 | 17915959 | 17915765 | ID=MS.gene013921.t1.exon2;Parent=MS.gene013921.t1 |
chr7.1 | CDS | 17915765 | 17915959 | 17915765 | ID=cds.MS.gene013921.t1;Parent=MS.gene013921.t1 |
chr7.1 | exon | 17916109 | 17916417 | 17916109 | ID=MS.gene013921.t1.exon3;Parent=MS.gene013921.t1 |
chr7.1 | CDS | 17916109 | 17916417 | 17916109 | ID=cds.MS.gene013921.t1;Parent=MS.gene013921.t1 |
chr7.1 | exon | 17916768 | 17916983 | 17916768 | ID=MS.gene013921.t1.exon4;Parent=MS.gene013921.t1 |
chr7.1 | CDS | 17916768 | 17916983 | 17916768 | ID=cds.MS.gene013921.t1;Parent=MS.gene013921.t1 |
chr7.1 | exon | 17917109 | 17917648 | 17917109 | ID=MS.gene013921.t1.exon5;Parent=MS.gene013921.t1 |
chr7.1 | CDS | 17917109 | 17917648 | 17917109 | ID=cds.MS.gene013921.t1;Parent=MS.gene013921.t1 |
Gene Sequence |
Protein sequence |