Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014519.t1 | XP_013462118.1 | 98.8 | 492 | 6 | 0 | 1 | 492 | 1 | 492 | 2.50E-266 | 927.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014519.t1 | Q8RY60 | 66.3 | 466 | 129 | 4 | 1 | 446 | 1 | 458 | 1.6e-157 | 557.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014519.t1 | A0A072V458 | 98.8 | 492 | 6 | 0 | 1 | 492 | 1 | 492 | 1.8e-266 | 927.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014519 | MS.gene064542 | PPI |
| MS.gene035805 | MS.gene014519 | PPI |
| MS.gene014519 | MS.gene73119 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014519.t1 | MTR_3g111830 | 98.780 | 492 | 6 | 0 | 1 | 492 | 1 | 492 | 0.0 | 995 |
| MS.gene014519.t1 | MTR_4g092610 | 56.440 | 427 | 180 | 3 | 1 | 427 | 1 | 421 | 5.17e-166 | 476 |
| MS.gene014519.t1 | MTR_2g010520 | 56.440 | 427 | 184 | 1 | 1 | 427 | 1 | 425 | 1.87e-161 | 464 |
| MS.gene014519.t1 | MTR_2g010520 | 65.506 | 316 | 109 | 0 | 1 | 316 | 1 | 316 | 5.53e-149 | 429 |
| MS.gene014519.t1 | MTR_4g117360 | 50.575 | 435 | 188 | 9 | 9 | 436 | 31 | 445 | 2.10e-141 | 416 |
| MS.gene014519.t1 | MTR_6g052300 | 43.776 | 482 | 244 | 6 | 4 | 480 | 10 | 469 | 5.29e-139 | 409 |
| MS.gene014519.t1 | MTR_6g045467 | 48.724 | 431 | 182 | 6 | 9 | 434 | 27 | 423 | 1.79e-134 | 397 |
| MS.gene014519.t1 | MTR_6g045467 | 48.724 | 431 | 182 | 6 | 9 | 434 | 27 | 423 | 2.35e-134 | 397 |
| MS.gene014519.t1 | MTR_6g051860 | 57.143 | 301 | 129 | 0 | 7 | 307 | 75 | 375 | 6.80e-126 | 374 |
| MS.gene014519.t1 | MTR_6g045467 | 47.585 | 414 | 178 | 6 | 9 | 417 | 27 | 406 | 6.24e-123 | 366 |
| MS.gene014519.t1 | MTR_2g010520 | 67.568 | 259 | 84 | 0 | 1 | 259 | 1 | 259 | 1.12e-121 | 357 |
| MS.gene014519.t1 | MTR_7g094620 | 46.882 | 433 | 203 | 10 | 9 | 431 | 31 | 446 | 3.16e-117 | 353 |
| MS.gene014519.t1 | MTR_7g010900 | 41.915 | 470 | 223 | 8 | 9 | 462 | 31 | 466 | 1.41e-114 | 347 |
| MS.gene014519.t1 | MTR_6g045467 | 47.042 | 355 | 150 | 5 | 84 | 434 | 1 | 321 | 2.36e-105 | 319 |
| MS.gene014519.t1 | MTR_6g045467 | 46.761 | 355 | 151 | 5 | 84 | 434 | 4 | 324 | 2.49e-105 | 318 |
| MS.gene014519.t1 | MTR_6g045467 | 46.761 | 355 | 151 | 5 | 84 | 434 | 4 | 324 | 4.97e-105 | 318 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014519.t1 | AT1G47330 | 66.667 | 495 | 143 | 5 | 1 | 479 | 1 | 489 | 0.0 | 648 |
| MS.gene014519.t1 | AT1G47330 | 63.285 | 414 | 130 | 5 | 82 | 479 | 1 | 408 | 2.18e-178 | 508 |
| MS.gene014519.t1 | AT2G14520 | 55.581 | 439 | 157 | 4 | 1 | 427 | 1 | 413 | 4.85e-163 | 468 |
| MS.gene014519.t1 | AT2G14520 | 56.613 | 431 | 171 | 4 | 1 | 427 | 1 | 419 | 1.12e-162 | 467 |
| MS.gene014519.t1 | AT2G14520 | 56.613 | 431 | 171 | 4 | 1 | 427 | 1 | 419 | 1.12e-162 | 467 |
| MS.gene014519.t1 | AT4G33700 | 55.972 | 427 | 181 | 3 | 1 | 427 | 1 | 420 | 4.13e-159 | 458 |
| MS.gene014519.t1 | AT5G52790 | 49.550 | 444 | 178 | 3 | 2 | 441 | 3 | 404 | 1.43e-146 | 429 |
| MS.gene014519.t1 | AT5G52790 | 50.000 | 432 | 178 | 4 | 2 | 433 | 3 | 396 | 3.83e-144 | 419 |
| MS.gene014519.t1 | AT5G52790 | 49.519 | 416 | 172 | 4 | 2 | 417 | 3 | 380 | 5.95e-135 | 395 |
| MS.gene014519.t1 | AT5G52790 | 49.519 | 416 | 172 | 4 | 2 | 417 | 3 | 380 | 5.95e-135 | 395 |
| MS.gene014519.t1 | AT5G52790 | 48.931 | 421 | 169 | 3 | 2 | 418 | 3 | 381 | 2.28e-134 | 396 |
| MS.gene014519.t1 | AT4G14230 | 48.148 | 432 | 198 | 6 | 9 | 436 | 30 | 439 | 5.51e-132 | 392 |
| MS.gene014519.t1 | AT4G14240 | 48.843 | 432 | 193 | 7 | 9 | 436 | 31 | 438 | 4.46e-129 | 384 |
| MS.gene014519.t1 | AT4G33700 | 64.769 | 281 | 99 | 0 | 1 | 281 | 1 | 281 | 1.48e-128 | 375 |
| MS.gene014519.t1 | AT1G03270 | 48.506 | 435 | 188 | 10 | 9 | 431 | 29 | 439 | 4.00e-128 | 382 |
| MS.gene014519.t1 | AT4G14240 | 48.148 | 432 | 187 | 8 | 9 | 436 | 31 | 429 | 9.28e-124 | 370 |
| MS.gene014519.t1 | AT4G33700 | 53.198 | 344 | 154 | 3 | 84 | 427 | 1 | 337 | 1.86e-117 | 349 |
| MS.gene014519.t1 | AT2G14520 | 52.874 | 348 | 148 | 4 | 84 | 427 | 1 | 336 | 2.81e-116 | 346 |
| MS.gene014519.t1 | AT4G14240 | 46.927 | 358 | 163 | 6 | 82 | 436 | 1 | 334 | 3.13e-100 | 306 |
Find 105 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTCCAAAGATGAGAATT+AGG | 0.181579 | 3.1:+89290823 | None:intergenic |
| CTTAACAACTGGGAATATTT+TGG | 0.190462 | 3.1:+89291069 | None:intergenic |
| CCATTGTCATTATTGAATTC+AGG | 0.202132 | 3.1:+89289741 | None:intergenic |
| GTTACCCTAATTCTCATCTT+TGG | 0.237922 | 3.1:-89290828 | MS.gene014519:CDS |
| GTTCGCTCTCCTGCATAAAC+TGG | 0.247690 | 3.1:+89289704 | None:intergenic |
| AGCACACCTTACCTTGCTTA+TGG | 0.258974 | 3.1:+89290588 | None:intergenic |
| ACTCTTGGACTCATGTCTTT+AGG | 0.262493 | 3.1:-89291151 | MS.gene014519:CDS |
| GGTATGCTTCGCTGGTCTTA+TGG | 0.266966 | 3.1:-89291182 | MS.gene014519:CDS |
| AAGGGAAAATGCCTTTGATA+TGG | 0.302600 | 3.1:+89289880 | None:intergenic |
| AGGAGAGCGAACAAACATTA+TGG | 0.326640 | 3.1:-89289693 | MS.gene014519:CDS |
| TTATGCTGCTGTCTTGATTT+CGG | 0.334551 | 3.1:-89290850 | MS.gene014519:CDS |
| AGTTAACATGAATGCTTCTA+AGG | 0.340623 | 3.1:-89287673 | MS.gene014519:CDS |
| CTTATGGCTGGTCTCACTCT+TGG | 0.347100 | 3.1:-89291166 | MS.gene014519:CDS |
| AGATGCTGATTCTTAACAAC+TGG | 0.362278 | 3.1:+89291058 | None:intergenic |
| CCTTCTAATTTAGCAGTTCA+AGG | 0.367178 | 3.1:-89287621 | MS.gene014519:CDS |
| AAACATTATGGGACTTGTTC+TGG | 0.370883 | 3.1:-89289681 | MS.gene014519:intron |
| GCACACCTTACCTTGCTTAT+GGG | 0.393731 | 3.1:+89290589 | None:intergenic |
| TTGTACATATTGATAATCAT+AGG | 0.399731 | 3.1:-89291208 | MS.gene014519:CDS |
| AAAAGTGCTCCCTTGGATAA+AGG | 0.403057 | 3.1:-89288595 | MS.gene014519:intron |
| CTCGAAGTTCTCATCAAATC+TGG | 0.404865 | 3.1:-89291118 | MS.gene014519:CDS |
| CATTGTCATTATTGAATTCA+GGG | 0.415244 | 3.1:+89289742 | None:intergenic |
| CATATTGATAATCATAGGTT+TGG | 0.415652 | 3.1:-89291203 | MS.gene014519:CDS |
| CTCTCCAAAGATGAGAATTA+GGG | 0.416189 | 3.1:+89290824 | None:intergenic |
| TCTCTTTATGGTTGATTCAA+AGG | 0.420745 | 3.1:-89288921 | MS.gene014519:CDS |
| CAGGTGCTTGATCGGATGTT+GGG | 0.423011 | 3.1:-89290202 | MS.gene014519:CDS |
| CCACCCAACGAAGTGGTTGT+TGG | 0.425913 | 3.1:-89288241 | MS.gene014519:CDS |
| GAAAAGCTGCTCTGTTAAAG+AGG | 0.428710 | 3.1:-89290174 | MS.gene014519:CDS |
| ACTTTCCGATATTTGATCAA+TGG | 0.429420 | 3.1:+89287542 | None:intergenic |
| GATGTTGTGGAACTAAATTC+TGG | 0.432619 | 3.1:-89291231 | MS.gene014519:CDS |
| TACCACCATTGATCAAATAT+CGG | 0.434482 | 3.1:-89287547 | MS.gene014519:CDS |
| TGTAATCGAAGAGCTTCTTC+AGG | 0.437035 | 3.1:-89288200 | MS.gene014519:intron |
| CTTGCTTATGGGATAAGCTA+TGG | 0.437062 | 3.1:+89290600 | None:intergenic |
| TTAGAGTTGCATCCAAATCA+AGG | 0.438762 | 3.1:+89289861 | None:intergenic |
| ATAGGTTTGGTATGCTTCGC+TGG | 0.451471 | 3.1:-89291190 | MS.gene014519:CDS |
| GGTTGTTGGTGTTATTTCAA+TGG | 0.455509 | 3.1:-89288227 | MS.gene014519:CDS |
| TCTACAGCTACTTCTGCAAC+GGG | 0.456138 | 3.1:-89287576 | MS.gene014519:CDS |
| CCTTGAACTGCTAAATTAGA+AGG | 0.461877 | 3.1:+89287621 | None:intergenic |
| TGCTTCGCTGGTCTTATGGC+TGG | 0.465349 | 3.1:-89291178 | MS.gene014519:CDS |
| TTCAAGGGCACCGGCTATGA+TGG | 0.468114 | 3.1:+89289937 | None:intergenic |
| GGAGAGCGAACAAACATTAT+GGG | 0.473611 | 3.1:-89289692 | MS.gene014519:CDS |
| CACTTCGTTGGGTGGAAACA+CGG | 0.476023 | 3.1:+89288249 | None:intergenic |
| TCAGGTGCTTGATCGGATGT+TGG | 0.476103 | 3.1:-89290203 | MS.gene014519:intron |
| ACACCAACAACCACTTCGTT+GGG | 0.477670 | 3.1:+89288238 | None:intergenic |
| TTGTACACGATACGGATTGA+TGG | 0.481123 | 3.1:-89290674 | MS.gene014519:CDS |
| GCTGTAGAAATCGAATTAGT+TGG | 0.483806 | 3.1:+89287591 | None:intergenic |
| GATCGGAAATTCCTTAGCTA+TGG | 0.485986 | 3.1:-89291017 | MS.gene014519:CDS |
| AGGGAAAATGCCTTTGATAT+GGG | 0.486803 | 3.1:+89289881 | None:intergenic |
| TAAATCTCTACCTTTATCCA+AGG | 0.493315 | 3.1:+89288585 | None:intergenic |
| TTCAGTCAATTCAAGGGCAC+CGG | 0.499613 | 3.1:+89289928 | None:intergenic |
| TAAGAGATGGCTGCAGATGT+AGG | 0.500315 | 3.1:-89291253 | None:intergenic |
| AACACCAACAACCACTTCGT+TGG | 0.500800 | 3.1:+89288237 | None:intergenic |
| GGCTGCAACAGATTTGCATC+AGG | 0.502522 | 3.1:+89287642 | None:intergenic |
| TTGGGTGGAAACACGGGCAA+GGG | 0.503791 | 3.1:+89288256 | None:intergenic |
| CTGAATTCAATAATGACAAT+GGG | 0.509825 | 3.1:-89289740 | MS.gene014519:CDS |
| TTCTACAGCTACTTCTGCAA+CGG | 0.509991 | 3.1:-89287577 | MS.gene014519:CDS |
| TGAGGAACAACTAGAGTTCA+AGG | 0.516832 | 3.1:-89288638 | MS.gene014519:CDS |
| AGTAGAGTCCCAGTTTATGC+AGG | 0.520155 | 3.1:-89289713 | MS.gene014519:CDS |
| TTCGCTCTCCTGCATAAACT+GGG | 0.527846 | 3.1:+89289705 | None:intergenic |
| CATGAATGCTTCTAAGGAGA+AGG | 0.530301 | 3.1:-89287667 | MS.gene014519:CDS |
| TACATATGTAGGTACAGTGT+TGG | 0.530341 | 3.1:-89288413 | MS.gene014519:intron |
| CAAGGACAGCTGTAGGAACA+AGG | 0.530759 | 3.1:-89288620 | MS.gene014519:CDS |
| TGCCTTTGATATGGGAGTCA+TGG | 0.532757 | 3.1:+89289889 | None:intergenic |
| GTTGGGTGGAAACACGGGCA+AGG | 0.534220 | 3.1:+89288255 | None:intergenic |
| GAAATCAAGACAGCAGCATA+AGG | 0.534769 | 3.1:+89290852 | None:intergenic |
| AGGGAGCATTATCAAGGTCC+AGG | 0.534989 | 3.1:+89288275 | None:intergenic |
| CGGAAATTCCTTAGCTATGG+AGG | 0.535191 | 3.1:-89291014 | MS.gene014519:intron |
| TGTTGGTGTTATTTCAATGG+AGG | 0.536577 | 3.1:-89288224 | MS.gene014519:CDS |
| CAAGCTGTTTGTACACGATA+CGG | 0.539871 | 3.1:-89290682 | MS.gene014519:CDS |
| TTGCTTATGGGATAAGCTAT+GGG | 0.544758 | 3.1:+89290601 | None:intergenic |
| CTTGATCGGATGTTGGGTAA+AGG | 0.545868 | 3.1:-89290196 | MS.gene014519:CDS |
| ACTTCGTTGGGTGGAAACAC+GGG | 0.546891 | 3.1:+89288250 | None:intergenic |
| CCTGAATTCAATAATGACAA+TGG | 0.546972 | 3.1:-89289741 | MS.gene014519:CDS |
| CAGATTTGATGAGAACTTCG+AGG | 0.550852 | 3.1:+89291119 | None:intergenic |
| CGGGCAAGGGAGCATTATCA+AGG | 0.558047 | 3.1:+89288269 | None:intergenic |
| CCTAATTCTCATCTTTGGAG+AGG | 0.564389 | 3.1:-89290823 | MS.gene014519:intron |
| AAATCTCTACCTTTATCCAA+GGG | 0.565221 | 3.1:+89288586 | None:intergenic |
| TAGAGTTGCATCCAAATCAA+GGG | 0.567063 | 3.1:+89289862 | None:intergenic |
| AGGTTGTTCATATTGCATCC+TGG | 0.569511 | 3.1:-89288293 | MS.gene014519:CDS |
| TTAAAAGCAGGCGTTGCTGG+TGG | 0.574837 | 3.1:+89288328 | None:intergenic |
| CGTGTTTCCACCCAACGAAG+TGG | 0.574989 | 3.1:-89288248 | MS.gene014519:CDS |
| GATATTTGATCAATGGTGGT+AGG | 0.578278 | 3.1:+89287549 | None:intergenic |
| GCTGCAGATGTAGGATGTTG+TGG | 0.578971 | 3.1:-89291244 | MS.gene014519:CDS |
| AATTGTTACCTCCATAGCTA+AGG | 0.579727 | 3.1:+89291006 | None:intergenic |
| CCAACAACCACTTCGTTGGG+TGG | 0.582637 | 3.1:+89288241 | None:intergenic |
| TGCCATGACTCCCATATCAA+AGG | 0.585212 | 3.1:-89289891 | MS.gene014519:CDS |
| ACACGATACGGATTGATGGT+TGG | 0.586203 | 3.1:-89290670 | MS.gene014519:CDS |
| TCTGCGTAGGCTGGGAAAGG+AGG | 0.586913 | 3.1:-89289983 | MS.gene014519:intron |
| TATCGGAAAGTGAGTCACTC+AGG | 0.588739 | 3.1:-89287530 | MS.gene014519:CDS |
| TTCCGATATTTGATCAATGG+TGG | 0.589597 | 3.1:+89287545 | None:intergenic |
| TATACTGAATGAATTTCAGA+AGG | 0.592402 | 3.1:-89288731 | MS.gene014519:CDS |
| GATGAGACAACCATCATAGC+CGG | 0.601218 | 3.1:-89289947 | MS.gene014519:CDS |
| TAGAGTTCAAGGACAGCTGT+AGG | 0.603806 | 3.1:-89288627 | MS.gene014519:CDS |
| AAAAGCTGCTCTGTTAAAGA+GGG | 0.612879 | 3.1:-89290173 | MS.gene014519:CDS |
| GCGGCATGGATGCGATGTTG+AGG | 0.613691 | 3.1:+89291091 | None:intergenic |
| TCACACGATACTGTGACTGC+TGG | 0.619416 | 3.1:-89288388 | MS.gene014519:CDS |
| AAAAGAAGAACACGAACAAG+CGG | 0.620527 | 3.1:+89290634 | None:intergenic |
| GATGCTGATTCTTAACAACT+GGG | 0.626895 | 3.1:+89291059 | None:intergenic |
| TATCGTGTACAAACAGCTTG+AGG | 0.643312 | 3.1:+89290685 | None:intergenic |
| CATAGCTTATCCCATAAGCA+AGG | 0.643663 | 3.1:-89290599 | MS.gene014519:intron |
| ATCAAGACAGCAGCATAAGG+TGG | 0.647982 | 3.1:+89290855 | None:intergenic |
| ACTGCTGGTAGTAAGATTGA+CGG | 0.652137 | 3.1:-89288373 | MS.gene014519:CDS |
| AAGGACAGCTGTAGGAACAA+GGG | 0.671823 | 3.1:-89288619 | MS.gene014519:CDS |
| ATACTGAATGAATTTCAGAA+GGG | 0.676158 | 3.1:-89288730 | MS.gene014519:CDS |
| TCATTCAGTATATCATACAG+AGG | 0.709636 | 3.1:+89288742 | None:intergenic |
| GCTGGTAGTAAGATTGACGG+CGG | 0.746959 | 3.1:-89288370 | MS.gene014519:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATATCCAAAAAAATTA+AGG | - | chr3.1:89290106-89290125 | MS.gene014519:intron | 15.0% |
| !! | CTATGATAAAAGATAAAATA+AGG | - | chr3.1:89288332-89288351 | MS.gene014519:CDS | 15.0% |
| !!! | AAATTATGGTTTTGATATTT+TGG | - | chr3.1:89289651-89289670 | MS.gene014519:intron | 15.0% |
| !!! | AATTATGGTTTTGATATTTT+GGG | - | chr3.1:89289652-89289671 | MS.gene014519:intron | 15.0% |
| !!! | TAATGGACATTATTATTAAT+CGG | + | chr3.1:89289159-89289178 | None:intergenic | 15.0% |
| !!! | TTATTTATCTATGTGATTTT+AGG | - | chr3.1:89287974-89287993 | MS.gene014519:intron | 15.0% |
| !! | ACATTATTCACTATATATCA+CGG | + | chr3.1:89289412-89289431 | None:intergenic | 20.0% |
| !! | ACCAATTCATTGTAATTTAA+TGG | - | chr3.1:89289793-89289812 | MS.gene014519:intron | 20.0% |
| !! | ATGAGATAATTTATAACAAG+AGG | + | chr3.1:89289297-89289316 | None:intergenic | 20.0% |
| !! | TGAGATAATTTATAACAAGA+GGG | + | chr3.1:89289296-89289315 | None:intergenic | 20.0% |
| !! | TTATACAAACAAGACTATAA+TGG | + | chr3.1:89288248-89288267 | None:intergenic | 20.0% |
| !! | TTATGATAGAAGACTAATAA+TGG | + | chr3.1:89289176-89289195 | None:intergenic | 20.0% |
| !!! | AAGTTGTTGATATGATTTTA+TGG | - | chr3.1:89289951-89289970 | MS.gene014519:CDS | 20.0% |
| !!! | TTGTACATATTGATAATCAT+AGG | - | chr3.1:89287560-89287579 | MS.gene014519:CDS | 20.0% |
| ! | AAAAATGAATTCAGTGAACA+AGG | + | chr3.1:89288053-89288072 | None:intergenic | 25.0% |
| ! | ACAATAGCATCAAGAAAAAT+AGG | + | chr3.1:89287892-89287911 | None:intergenic | 25.0% |
| ! | ATACTGAATGAATTTCAGAA+GGG | - | chr3.1:89290038-89290057 | MS.gene014519:intron | 25.0% |
| ! | ATATGAAAAAGAATTTACCG+AGG | + | chr3.1:89289911-89289930 | None:intergenic | 25.0% |
| ! | ATCATACTATAGTAATATGC+AGG | + | chr3.1:89288516-89288535 | None:intergenic | 25.0% |
| ! | ATCCAAAAAAATTAAGGATG+AGG | - | chr3.1:89290112-89290131 | MS.gene014519:intron | 25.0% |
| ! | CATAAACAATAATGATAGTC+AGG | + | chr3.1:89289608-89289627 | None:intergenic | 25.0% |
| ! | CATATGCATGAAATGAAAAT+TGG | - | chr3.1:89289926-89289945 | MS.gene014519:CDS | 25.0% |
| ! | CATTGTCATTATTGAATTCA+GGG | + | chr3.1:89289029-89289048 | None:intergenic | 25.0% |
| ! | CTGAATTCAATAATGACAAT+GGG | - | chr3.1:89289028-89289047 | MS.gene014519:intron | 25.0% |
| ! | GCCATTAAATTACAATGAAT+TGG | + | chr3.1:89289797-89289816 | None:intergenic | 25.0% |
| ! | TATACTGAATGAATTTCAGA+AGG | - | chr3.1:89290037-89290056 | MS.gene014519:intron | 25.0% |
| ! | TATAGTGAATAATGTTTGTG+AGG | - | chr3.1:89289417-89289436 | MS.gene014519:intron | 25.0% |
| !! | ATGAAGATTGTGATATTTTC+AGG | - | chr3.1:89288547-89288566 | MS.gene014519:intron | 25.0% |
| !! | CATATTGATAATCATAGGTT+TGG | - | chr3.1:89287565-89287584 | MS.gene014519:CDS | 25.0% |
| !! | TTACTTTGTACTCTTTTGAT+CGG | - | chr3.1:89287734-89287753 | MS.gene014519:intron | 25.0% |
| !! | TTTTGTCTGTATCCTTAATA+GGG | - | chr3.1:89290262-89290281 | MS.gene014519:intron | 25.0% |
| !! | TTTTTCACTTATATACATCC+AGG | - | chr3.1:89289817-89289836 | MS.gene014519:intron | 25.0% |
| !!! | CTATACTTTCTTGTTTTGTA+AGG | - | chr3.1:89288013-89288032 | MS.gene014519:intron | 25.0% |
| !!! | GGTTTTAAACTTACTTGTTA+TGG | + | chr3.1:89290899-89290918 | None:intergenic | 25.0% |
| !!! | TGTTTTTGAAATATCATCTG+TGG | - | chr3.1:89290239-89290258 | MS.gene014519:intron | 25.0% |
| !!! | TTAATTTTGTTTTTCTGCGT+AGG | - | chr3.1:89288772-89288791 | MS.gene014519:intron | 25.0% |
| !!! | TTCCTCATCCTTAATTTTTT+TGG | + | chr3.1:89290117-89290136 | None:intergenic | 25.0% |
| AAAAACATAATGTCAACACG+AGG | + | chr3.1:89290226-89290245 | None:intergenic | 30.0% | |
| AAACAAAAGAACTTGATCAC+AGG | + | chr3.1:89288715-89288734 | None:intergenic | 30.0% | |
| AAAGTGGTCTAATTAAACTG+GGG | + | chr3.1:89290947-89290966 | None:intergenic | 30.0% | |
| AAATCTCTACCTTTATCCAA+GGG | + | chr3.1:89290185-89290204 | None:intergenic | 30.0% | |
| ACAAAGTGGTCTAATTAAAC+TGG | + | chr3.1:89290949-89290968 | None:intergenic | 30.0% | |
| ACAATTGCAGCAATAACAAA+TGG | + | chr3.1:89290739-89290758 | None:intergenic | 30.0% | |
| ACATACATGCATAACTATAG+TGG | + | chr3.1:89290608-89290627 | None:intergenic | 30.0% | |
| ACTTTCATAAGACCCTATTA+AGG | + | chr3.1:89290277-89290296 | None:intergenic | 30.0% | |
| ACTTTCCGATATTTGATCAA+TGG | + | chr3.1:89291229-89291248 | None:intergenic | 30.0% | |
| AGTTAACATGAATGCTTCTA+AGG | - | chr3.1:89291095-89291114 | MS.gene014519:CDS | 30.0% | |
| ATCAAATTTGTGTGCATTTC+AGG | - | chr3.1:89290836-89290855 | MS.gene014519:CDS | 30.0% | |
| ATGAGGAAATCATGATTACT+GGG | + | chr3.1:89289980-89289999 | None:intergenic | 30.0% | |
| CAAAGTGGTCTAATTAAACT+GGG | + | chr3.1:89290948-89290967 | None:intergenic | 30.0% | |
| CACTATTCTTGTAATCATGT+TGG | - | chr3.1:89289221-89289240 | MS.gene014519:intron | 30.0% | |
| CCAGGTTAAAAATCTCTTTA+TGG | - | chr3.1:89289835-89289854 | MS.gene014519:intron | 30.0% | |
| CCATTGTCATTATTGAATTC+AGG | + | chr3.1:89289030-89289049 | None:intergenic | 30.0% | |
| CCTGAATTCAATAATGACAA+TGG | - | chr3.1:89289027-89289046 | MS.gene014519:intron | 30.0% | |
| GAATTAGCATATAAGACACT+GGG | + | chr3.1:89290813-89290832 | None:intergenic | 30.0% | |
| GTATTCAGTTTAGTGTAGTT+TGG | - | chr3.1:89290996-89291015 | MS.gene014519:intron | 30.0% | |
| TAAATCTCTACCTTTATCCA+AGG | + | chr3.1:89290186-89290205 | None:intergenic | 30.0% | |
| TACCACCATTGATCAAATAT+CGG | - | chr3.1:89291221-89291240 | MS.gene014519:CDS | 30.0% | |
| TATCGTCGTTTATTGTTAAC+AGG | - | chr3.1:89288975-89288994 | MS.gene014519:intron | 30.0% | |
| TCATTCAGTATATCATACAG+AGG | + | chr3.1:89290029-89290048 | None:intergenic | 30.0% | |
| TGATCATCAGAAAAATTCCT+CGG | - | chr3.1:89289891-89289910 | MS.gene014519:CDS | 30.0% | |
| ! | AAGACTTTTGTGGATTTTCA+TGG | - | chr3.1:89288626-89288645 | MS.gene014519:CDS | 30.0% |
| ! | AATAAGTTGAAAACAGCTCA+TGG | - | chr3.1:89288396-89288415 | MS.gene014519:CDS | 30.0% |
| ! | AATTAGACCACTTTGTTGTA+TGG | - | chr3.1:89290953-89290972 | MS.gene014519:intron | 30.0% |
| ! | AATTTTCTATTACACCACAC+AGG | + | chr3.1:89289687-89289706 | None:intergenic | 30.0% |
| ! | AGTCTTTTCAGTCAATTCAA+GGG | + | chr3.1:89288849-89288868 | None:intergenic | 30.0% |
| ! | CACAATCTTCATATTTTCAC+AGG | + | chr3.1:89288539-89288558 | None:intergenic | 30.0% |
| ! | CCATAAAGAGATTTTTAACC+TGG | + | chr3.1:89289838-89289857 | None:intergenic | 30.0% |
| ! | CTTAACAACTGGGAATATTT+TGG | + | chr3.1:89287702-89287721 | None:intergenic | 30.0% |
| ! | GTTTTGTCTGTATCCTTAAT+AGG | - | chr3.1:89290261-89290280 | MS.gene014519:intron | 30.0% |
| ! | TCTCTTTATGGTTGATTCAA+AGG | - | chr3.1:89289847-89289866 | MS.gene014519:intron | 30.0% |
| ! | TTTGAAATGCATAGTTCAAG+AGG | - | chr3.1:89288666-89288685 | MS.gene014519:CDS | 30.0% |
| !! | AAGAAAATGGATTTTCTGCA+TGG | - | chr3.1:89289723-89289742 | MS.gene014519:CDS | 30.0% |
| !! | CTGATGATCATTTTTCTTAG+AGG | + | chr3.1:89289881-89289900 | None:intergenic | 30.0% |
| !! | GTGATCAAGTTCTTTTGTTT+CGG | - | chr3.1:89288715-89288734 | MS.gene014519:CDS | 30.0% |
| !! | TTGAGATTTTGAGTAGATGA+TGG | - | chr3.1:89289123-89289142 | MS.gene014519:intron | 30.0% |
| !! | TTTTGATGATTATCTCTCTG+AGG | - | chr3.1:89290322-89290341 | MS.gene014519:intron | 30.0% |
| !!! | ATGGTTTTGATATTTTGGGA+AGG | - | chr3.1:89289656-89289675 | MS.gene014519:intron | 30.0% |
| !!! | GTTGTTTTGATAAGCTATCT+TGG | - | chr3.1:89288359-89288378 | MS.gene014519:CDS | 30.0% |
| !!! | TGGTTTTGATATTTTGGGAA+GGG | - | chr3.1:89289657-89289676 | MS.gene014519:intron | 30.0% |
| AAAAGAAGAACACGAACAAG+CGG | + | chr3.1:89288137-89288156 | None:intergenic | 35.0% | |
| AAAAGCTGCTCTGTTAAAGA+GGG | - | chr3.1:89288595-89288614 | MS.gene014519:intron | 35.0% | |
| AAACGACGATAGAAACATAG+TGG | + | chr3.1:89288966-89288985 | None:intergenic | 35.0% | |
| AAATTTGTGTGCATTTCAGG+AGG | - | chr3.1:89290839-89290858 | MS.gene014519:CDS | 35.0% | |
| AAGGGAAAATGCCTTTGATA+TGG | + | chr3.1:89288891-89288910 | None:intergenic | 35.0% | |
| AAGTGGTCTAATTAAACTGG+GGG | + | chr3.1:89290946-89290965 | None:intergenic | 35.0% | |
| AAGTTTGTGGTTGATCTACT+CGG | - | chr3.1:89290293-89290312 | MS.gene014519:intron | 35.0% | |
| AATTGTTACCTCCATAGCTA+AGG | + | chr3.1:89287765-89287784 | None:intergenic | 35.0% | |
| AGGGAAAATGCCTTTGATAT+GGG | + | chr3.1:89288890-89288909 | None:intergenic | 35.0% | |
| ATGCATAGTTCAAGAGGAAT+TGG | - | chr3.1:89288672-89288691 | MS.gene014519:CDS | 35.0% | |
| CCTTCTAATTTAGCAGTTCA+AGG | - | chr3.1:89291147-89291166 | MS.gene014519:CDS | 35.0% | |
| CCTTGAACTGCTAAATTAGA+AGG | + | chr3.1:89291150-89291169 | None:intergenic | 35.0% | |
| CGAATTAGCATATAAGACAC+TGG | + | chr3.1:89290814-89290833 | None:intergenic | 35.0% | |
| CTCTCCAAAGATGAGAATTA+GGG | + | chr3.1:89287947-89287966 | None:intergenic | 35.0% | |
| GAAAATTTGTATCGAGTGAC+TGG | - | chr3.1:89289700-89289719 | MS.gene014519:CDS | 35.0% | |
| GATATTTGATCAATGGTGGT+AGG | + | chr3.1:89291222-89291241 | None:intergenic | 35.0% | |
| GATGAGGAAATCATGATTAC+TGG | + | chr3.1:89289981-89290000 | None:intergenic | 35.0% | |
| GATGTTGTGGAACTAAATTC+TGG | - | chr3.1:89287537-89287556 | MS.gene014519:CDS | 35.0% | |
| GCTGTAGAAATCGAATTAGT+TGG | + | chr3.1:89291180-89291199 | None:intergenic | 35.0% | |
| GGATGCAACTCTAAATTTGT+GGG | - | chr3.1:89288916-89288935 | MS.gene014519:CDS | 35.0% | |
| GTTACCCTAATTCTCATCTT+TGG | - | chr3.1:89287940-89287959 | MS.gene014519:intron | 35.0% | |
| TACATATGTAGGTACAGTGT+TGG | - | chr3.1:89290355-89290374 | MS.gene014519:intron | 35.0% | |
| TAGAGTTGCATCCAAATCAA+GGG | + | chr3.1:89288909-89288928 | None:intergenic | 35.0% | |
| TATGGGATTCATGTTAAGCT+CGG | - | chr3.1:89289567-89289586 | MS.gene014519:intron | 35.0% | |
| TCACAAGACAATTTAGAGAG+TGG | + | chr3.1:89290920-89290939 | None:intergenic | 35.0% | |
| TGCATGGTACATCATAAGAA+TGG | - | chr3.1:89289739-89289758 | MS.gene014519:CDS | 35.0% | |
| TGGATGCAACTCTAAATTTG+TGG | - | chr3.1:89288915-89288934 | MS.gene014519:CDS | 35.0% | |
| TGTTTGTGAGGTTTAATGCT+AGG | - | chr3.1:89289429-89289448 | MS.gene014519:intron | 35.0% | |
| TTAGAGTTGCATCCAAATCA+AGG | + | chr3.1:89288910-89288929 | None:intergenic | 35.0% | |
| TTATGCTGCTGTCTTGATTT+CGG | - | chr3.1:89287918-89287937 | MS.gene014519:intron | 35.0% | |
| TTCCGATATTTGATCAATGG+TGG | + | chr3.1:89291226-89291245 | None:intergenic | 35.0% | |
| TTGCTTATGGGATAAGCTAT+GGG | + | chr3.1:89288170-89288189 | None:intergenic | 35.0% | |
| ! | AAACATTATGGGACTTGTTC+TGG | - | chr3.1:89289087-89289106 | MS.gene014519:intron | 35.0% |
| ! | AATCCCATAAACCTTTTCCT+CGG | + | chr3.1:89289556-89289575 | None:intergenic | 35.0% |
| ! | CAGTCTTTTCAGTCAATTCA+AGG | + | chr3.1:89288850-89288869 | None:intergenic | 35.0% |
| ! | TAGGGTCTTATGAAAGTTTG+TGG | - | chr3.1:89290280-89290299 | MS.gene014519:intron | 35.0% |
| !! | AACAACTGGGAATATTTTGG+CGG | + | chr3.1:89287699-89287718 | None:intergenic | 35.0% |
| !! | AGATGCTGATTCTTAACAAC+TGG | + | chr3.1:89287713-89287732 | None:intergenic | 35.0% |
| !! | ATTCTTTGTTTCTGCACTGA+AGG | - | chr3.1:89288999-89289018 | MS.gene014519:intron | 35.0% |
| !! | GATCCTTGCAAAAAAGTACT+AGG | - | chr3.1:89289525-89289544 | MS.gene014519:intron | 35.0% |
| !! | GATGCTGATTCTTAACAACT+GGG | + | chr3.1:89287712-89287731 | None:intergenic | 35.0% |
| !! | GGTTGTTGGTGTTATTTCAA+TGG | - | chr3.1:89290541-89290560 | MS.gene014519:intron | 35.0% |
| !! | TGTTGGTGTTATTTCAATGG+AGG | - | chr3.1:89290544-89290563 | MS.gene014519:intron | 35.0% |
| !! | TTCTTTGTTTCTGCACTGAA+GGG | - | chr3.1:89289000-89289019 | MS.gene014519:intron | 35.0% |
| !!! | AAAGGCATTTTCCCTTGATT+TGG | - | chr3.1:89288895-89288914 | MS.gene014519:CDS | 35.0% |
| !!! | GATATTTTCAGGTGCTTGAT+CGG | - | chr3.1:89288558-89288577 | MS.gene014519:intron | 35.0% |
| AATTTCGAAGTCGCAGTACA+AGG | + | chr3.1:89289636-89289655 | None:intergenic | 40.0% | |
| ACTCTTGGACTCATGTCTTT+AGG | - | chr3.1:89287617-89287636 | MS.gene014519:CDS | 40.0% | |
| ACTGCTGGTAGTAAGATTGA+CGG | - | chr3.1:89290395-89290414 | MS.gene014519:intron | 40.0% | |
| AGCACATATGACAGGAACAT+TGG | + | chr3.1:89290773-89290792 | None:intergenic | 40.0% | |
| AGGAGAGCGAACAAACATTA+TGG | - | chr3.1:89289075-89289094 | MS.gene014519:intron | 40.0% | |
| AGGTTGTTCATATTGCATCC+TGG | - | chr3.1:89290475-89290494 | MS.gene014519:intron | 40.0% | |
| ATCGAGTGACTGGAAGAAAA+TGG | - | chr3.1:89289710-89289729 | MS.gene014519:CDS | 40.0% | |
| ATTATGTGTGTGTCTGTGTG+TGG | - | chr3.1:89288207-89288226 | MS.gene014519:CDS | 40.0% | |
| CAAGCTGTTTGTACACGATA+CGG | - | chr3.1:89288086-89288105 | MS.gene014519:intron | 40.0% | |
| CACACAGACACACACATAAT+TGG | + | chr3.1:89288207-89288226 | None:intergenic | 40.0% | |
| CAGATTTGATGAGAACTTCG+AGG | + | chr3.1:89287652-89287671 | None:intergenic | 40.0% | |
| CATAGCTTATCCCATAAGCA+AGG | - | chr3.1:89288169-89288188 | MS.gene014519:intron | 40.0% | |
| CCTCTCCAAAGATGAGAATT+AGG | + | chr3.1:89287948-89287967 | None:intergenic | 40.0% | |
| CTCGAAGTTCTCATCAAATC+TGG | - | chr3.1:89287650-89287669 | MS.gene014519:CDS | 40.0% | |
| CTTATCCCATAAGCAAGGTA+AGG | - | chr3.1:89288174-89288193 | MS.gene014519:intron | 40.0% | |
| CTTGCTTATGGGATAAGCTA+TGG | + | chr3.1:89288171-89288190 | None:intergenic | 40.0% | |
| GAAAAGCTGCTCTGTTAAAG+AGG | - | chr3.1:89288594-89288613 | MS.gene014519:intron | 40.0% | |
| GAAACAACAGCACATATGAC+AGG | + | chr3.1:89290781-89290800 | None:intergenic | 40.0% | |
| GAAATCAAGACAGCAGCATA+AGG | + | chr3.1:89287919-89287938 | None:intergenic | 40.0% | |
| GATCAAGTCATGACTAATGC+AGG | - | chr3.1:89291067-89291086 | MS.gene014519:CDS | 40.0% | |
| GATCGGAAATTCCTTAGCTA+TGG | - | chr3.1:89287751-89287770 | MS.gene014519:intron | 40.0% | |
| GGAGAGCGAACAAACATTAT+GGG | - | chr3.1:89289076-89289095 | MS.gene014519:intron | 40.0% | |
| GTACTGCGACTTCGAAATTA+TGG | - | chr3.1:89289637-89289656 | MS.gene014519:intron | 40.0% | |
| GTGACTGTTGGTACATATGT+AGG | - | chr3.1:89290344-89290363 | MS.gene014519:intron | 40.0% | |
| GTGAGGTTTAATGCTAGGAT+TGG | - | chr3.1:89289434-89289453 | MS.gene014519:intron | 40.0% | |
| TATCGTGTACAAACAGCTTG+AGG | + | chr3.1:89288086-89288105 | None:intergenic | 40.0% | |
| TGAAACACTGCAGAATGATG+AGG | + | chr3.1:89289997-89290016 | None:intergenic | 40.0% | |
| TGAGGAACAACTAGAGTTCA+AGG | - | chr3.1:89290130-89290149 | MS.gene014519:intron | 40.0% | |
| TGTAATCGAAGAGCTTCTTC+AGG | - | chr3.1:89290568-89290587 | MS.gene014519:intron | 40.0% | |
| TTCTACAGCTACTTCTGCAA+CGG | - | chr3.1:89291191-89291210 | MS.gene014519:CDS | 40.0% | |
| TTTGTCGCCATACAACAAAG+TGG | + | chr3.1:89290963-89290982 | None:intergenic | 40.0% | |
| ! | CATGAATGCTTCTAAGGAGA+AGG | - | chr3.1:89291101-89291120 | MS.gene014519:CDS | 40.0% |
| ! | CCTAATTCTCATCTTTGGAG+AGG | - | chr3.1:89287945-89287964 | MS.gene014519:intron | 40.0% |
| ! | TGTGGATTTTCATGGCAATG+AGG | - | chr3.1:89288634-89288653 | MS.gene014519:CDS | 40.0% |
| ! | TTGTACACGATACGGATTGA+TGG | - | chr3.1:89288094-89288113 | MS.gene014519:intron | 40.0% |
| !! | AAAAGTGCTCCCTTGGATAA+AGG | - | chr3.1:89290173-89290192 | MS.gene014519:CDS | 40.0% |
| !! | CAACGCCTGCTTTTAAAAAG+CGG | - | chr3.1:89290447-89290466 | MS.gene014519:intron | 40.0% |
| !! | GCTTTTAAAAAGCGGCATAG+AGG | - | chr3.1:89290455-89290474 | MS.gene014519:intron | 40.0% |
| !! | TTGCAAAAAAGTACTAGGCC+TGG | - | chr3.1:89289530-89289549 | MS.gene014519:intron | 40.0% |
| !! | TTTGTTTTTCTGCGTAGGCT+GGG | - | chr3.1:89288777-89288796 | MS.gene014519:intron | 40.0% |
| !! | TTTTTAAAAGCAGGCGTTGC+TGG | + | chr3.1:89290446-89290465 | None:intergenic | 40.0% |
| !!! | AGGCCTAGTACTTTTTTGCA+AGG | + | chr3.1:89289531-89289550 | None:intergenic | 40.0% |
| !!! | CTATGCCGCTTTTTAAAAGC+AGG | + | chr3.1:89290455-89290474 | None:intergenic | 40.0% |
| !!! | GGTGGACTTTTTTTCACTTG+TGG | + | chr3.1:89290425-89290444 | None:intergenic | 40.0% |
| !!! | TTTTGTTTTTCTGCGTAGGC+TGG | - | chr3.1:89288776-89288795 | MS.gene014519:intron | 40.0% |
| AACACCAACAACCACTTCGT+TGG | + | chr3.1:89290534-89290553 | None:intergenic | 45.0% | |
| AAGGACAGCTGTAGGAACAA+GGG | - | chr3.1:89290149-89290168 | MS.gene014519:CDS | 45.0% | |
| ACACCAACAACCACTTCGTT+GGG | + | chr3.1:89290533-89290552 | None:intergenic | 45.0% | |
| AGCACACCTTACCTTGCTTA+TGG | + | chr3.1:89288183-89288202 | None:intergenic | 45.0% | |
| AGTAGAGTCCCAGTTTATGC+AGG | - | chr3.1:89289055-89289074 | MS.gene014519:intron | 45.0% | |
| ATCAAGACAGCAGCATAAGG+TGG | + | chr3.1:89287916-89287935 | None:intergenic | 45.0% | |
| CGGAAATTCCTTAGCTATGG+AGG | - | chr3.1:89287754-89287773 | MS.gene014519:intron | 45.0% | |
| CTTGATCGGATGTTGGGTAA+AGG | - | chr3.1:89288572-89288591 | MS.gene014519:intron | 45.0% | |
| CTTTGTGCTCTCACTTAGCA+TGG | - | chr3.1:89288743-89288762 | MS.gene014519:CDS | 45.0% | |
| GATGAGACAACCATCATAGC+CGG | - | chr3.1:89288821-89288840 | MS.gene014519:intron | 45.0% | |
| GCACACCTTACCTTGCTTAT+GGG | + | chr3.1:89288182-89288201 | None:intergenic | 45.0% | |
| GCTATCTTGGACAGCTTATG+TGG | - | chr3.1:89288372-89288391 | MS.gene014519:CDS | 45.0% | |
| GGCGACAAAGTTTCTCATCT+TGG | - | chr3.1:89290974-89290993 | MS.gene014519:intron | 45.0% | |
| TAGAGTTCAAGGACAGCTGT+AGG | - | chr3.1:89290141-89290160 | MS.gene014519:CDS | 45.0% | |
| TATCGGAAAGTGAGTCACTC+AGG | - | chr3.1:89291238-89291257 | MS.gene014519:CDS | 45.0% | |
| TCTACAGCTACTTCTGCAAC+GGG | - | chr3.1:89291192-89291211 | MS.gene014519:CDS | 45.0% | |
| TGCCATGACTCCCATATCAA+AGG | - | chr3.1:89288877-89288896 | MS.gene014519:intron | 45.0% | |
| TGCCTTTGATATGGGAGTCA+TGG | + | chr3.1:89288882-89288901 | None:intergenic | 45.0% | |
| TGGCCGAGGAAAAGGTTTAT+GGG | - | chr3.1:89289550-89289569 | MS.gene014519:intron | 45.0% | |
| TTCGCTCTCCTGCATAAACT+GGG | + | chr3.1:89289066-89289085 | None:intergenic | 45.0% | |
| ! | ACACGATACGGATTGATGGT+TGG | - | chr3.1:89288098-89288117 | MS.gene014519:intron | 45.0% |
| ! | ATAGGTTTGGTATGCTTCGC+TGG | - | chr3.1:89287578-89287597 | MS.gene014519:CDS | 45.0% |
| ! | TTCAGTCAATTCAAGGGCAC+CGG | + | chr3.1:89288843-89288862 | None:intergenic | 45.0% |
| !! | TATCTCTCTGAGGTGACTGT+TGG | - | chr3.1:89290332-89290351 | MS.gene014519:intron | 45.0% |
| ACTTCGTTGGGTGGAAACAC+GGG | + | chr3.1:89290521-89290540 | None:intergenic | 50.0% | |
| CAAGGACAGCTGTAGGAACA+AGG | - | chr3.1:89290148-89290167 | MS.gene014519:CDS | 50.0% | |
| CACTTCGTTGGGTGGAAACA+CGG | + | chr3.1:89290522-89290541 | None:intergenic | 50.0% | |
| CAGGTGCTTGATCGGATGTT+GGG | - | chr3.1:89288566-89288585 | MS.gene014519:intron | 50.0% | |
| CTGGCCGAGGAAAAGGTTTA+TGG | - | chr3.1:89289549-89289568 | MS.gene014519:intron | 50.0% | |
| GCTGCAGATGTAGGATGTTG+TGG | - | chr3.1:89287524-89287543 | MS.gene014519:CDS | 50.0% | |
| GCTGGTAGTAAGATTGACGG+CGG | - | chr3.1:89290398-89290417 | MS.gene014519:intron | 50.0% | |
| GGCTGCAACAGATTTGCATC+AGG | + | chr3.1:89291129-89291148 | None:intergenic | 50.0% | |
| GTTCGCTCTCCTGCATAAAC+TGG | + | chr3.1:89289067-89289086 | None:intergenic | 50.0% | |
| TCACACGATACTGTGACTGC+TGG | - | chr3.1:89290380-89290399 | MS.gene014519:intron | 50.0% | |
| TCAGGTGCTTGATCGGATGT+TGG | - | chr3.1:89288565-89288584 | MS.gene014519:intron | 50.0% | |
| TTGGGAAGGGTTTACCTGTG+TGG | - | chr3.1:89289670-89289689 | MS.gene014519:intron | 50.0% | |
| ! | CATAAACCTTTTCCTCGGCC+AGG | + | chr3.1:89289551-89289570 | None:intergenic | 50.0% |
| ! | GGCAGAGCTCAAGACTTTTG+TGG | - | chr3.1:89288616-89288635 | MS.gene014519:CDS | 50.0% |
| ! | TTAAAAGCAGGCGTTGCTGG+TGG | + | chr3.1:89290443-89290462 | None:intergenic | 50.0% |
| ! | TTTTCTGCGTAGGCTGGGAA+AGG | - | chr3.1:89288782-89288801 | MS.gene014519:intron | 50.0% |
| !! | AGGGAGCATTATCAAGGTCC+AGG | + | chr3.1:89290496-89290515 | None:intergenic | 50.0% |
| !! | CAAGGGAAAAAGTGCTCCCT+TGG | - | chr3.1:89290166-89290185 | MS.gene014519:CDS | 50.0% |
| !! | CTTATGGCTGGTCTCACTCT+TGG | - | chr3.1:89287602-89287621 | MS.gene014519:CDS | 50.0% |
| !! | GGTATGCTTCGCTGGTCTTA+TGG | - | chr3.1:89287586-89287605 | MS.gene014519:CDS | 50.0% |
| !!! | CTGGGAATATTTTGGCGGCA+TGG | + | chr3.1:89287694-89287713 | None:intergenic | 50.0% |
| CCAACAACCACTTCGTTGGG+TGG | + | chr3.1:89290530-89290549 | None:intergenic | 55.0% | |
| CCACCCAACGAAGTGGTTGT+TGG | - | chr3.1:89290527-89290546 | MS.gene014519:intron | 55.0% | |
| CGTGTTTCCACCCAACGAAG+TGG | - | chr3.1:89290520-89290539 | MS.gene014519:intron | 55.0% | |
| TTGGGTGGAAACACGGGCAA+GGG | + | chr3.1:89290515-89290534 | None:intergenic | 55.0% | |
| !! | AAAAGTACTAGGCCTGGCCG+AGG | - | chr3.1:89289536-89289555 | MS.gene014519:intron | 55.0% |
| !! | CGGGCAAGGGAGCATTATCA+AGG | + | chr3.1:89290502-89290521 | None:intergenic | 55.0% |
| !! | TGCTTCGCTGGTCTTATGGC+TGG | - | chr3.1:89287590-89287609 | MS.gene014519:CDS | 55.0% |
| !! | TTCAAGGGCACCGGCTATGA+TGG | + | chr3.1:89288834-89288853 | None:intergenic | 55.0% |
| ACTAGGCCTGGCCGAGGAAA+AGG | - | chr3.1:89289542-89289561 | MS.gene014519:intron | 60.0% | |
| GCGGCATGGATGCGATGTTG+AGG | + | chr3.1:89287680-89287699 | None:intergenic | 60.0% | |
| GTTGGGTGGAAACACGGGCA+AGG | + | chr3.1:89290516-89290535 | None:intergenic | 60.0% | |
| TCTGCGTAGGCTGGGAAAGG+AGG | - | chr3.1:89288785-89288804 | MS.gene014519:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 89287521 | 89291269 | 89287521 | ID=MS.gene014519 |
| chr3.1 | mRNA | 89287521 | 89291269 | 89287521 | ID=MS.gene014519.t1;Parent=MS.gene014519 |
| chr3.1 | exon | 89291015 | 89291269 | 89291015 | ID=MS.gene014519.t1.exon1;Parent=MS.gene014519.t1 |
| chr3.1 | CDS | 89291015 | 89291269 | 89291015 | ID=cds.MS.gene014519.t1;Parent=MS.gene014519.t1 |
| chr3.1 | exon | 89290824 | 89290907 | 89290824 | ID=MS.gene014519.t1.exon2;Parent=MS.gene014519.t1 |
| chr3.1 | CDS | 89290824 | 89290907 | 89290824 | ID=cds.MS.gene014519.t1;Parent=MS.gene014519.t1 |
| chr3.1 | exon | 89290600 | 89290713 | 89290600 | ID=MS.gene014519.t1.exon3;Parent=MS.gene014519.t1 |
| chr3.1 | CDS | 89290600 | 89290713 | 89290600 | ID=cds.MS.gene014519.t1;Parent=MS.gene014519.t1 |
| chr3.1 | exon | 89290135 | 89290221 | 89290135 | ID=MS.gene014519.t1.exon4;Parent=MS.gene014519.t1 |
| chr3.1 | CDS | 89290135 | 89290221 | 89290135 | ID=cds.MS.gene014519.t1;Parent=MS.gene014519.t1 |
| chr3.1 | exon | 89289857 | 89289996 | 89289857 | ID=MS.gene014519.t1.exon5;Parent=MS.gene014519.t1 |
| chr3.1 | CDS | 89289857 | 89289996 | 89289857 | ID=cds.MS.gene014519.t1;Parent=MS.gene014519.t1 |
| chr3.1 | exon | 89289682 | 89289769 | 89289682 | ID=MS.gene014519.t1.exon6;Parent=MS.gene014519.t1 |
| chr3.1 | CDS | 89289682 | 89289769 | 89289682 | ID=cds.MS.gene014519.t1;Parent=MS.gene014519.t1 |
| chr3.1 | exon | 89288878 | 89288951 | 89288878 | ID=MS.gene014519.t1.exon7;Parent=MS.gene014519.t1 |
| chr3.1 | CDS | 89288878 | 89288951 | 89288878 | ID=cds.MS.gene014519.t1;Parent=MS.gene014519.t1 |
| chr3.1 | exon | 89288596 | 89288780 | 89288596 | ID=MS.gene014519.t1.exon8;Parent=MS.gene014519.t1 |
| chr3.1 | CDS | 89288596 | 89288780 | 89288596 | ID=cds.MS.gene014519.t1;Parent=MS.gene014519.t1 |
| chr3.1 | exon | 89288201 | 89288424 | 89288201 | ID=MS.gene014519.t1.exon9;Parent=MS.gene014519.t1 |
| chr3.1 | CDS | 89288201 | 89288424 | 89288201 | ID=cds.MS.gene014519.t1;Parent=MS.gene014519.t1 |
| chr3.1 | exon | 89287886 | 89287932 | 89287886 | ID=MS.gene014519.t1.exon10;Parent=MS.gene014519.t1 |
| chr3.1 | CDS | 89287886 | 89287932 | 89287886 | ID=cds.MS.gene014519.t1;Parent=MS.gene014519.t1 |
| chr3.1 | exon | 89287521 | 89287701 | 89287521 | ID=MS.gene014519.t1.exon11;Parent=MS.gene014519.t1 |
| chr3.1 | CDS | 89287521 | 89287701 | 89287521 | ID=cds.MS.gene014519.t1;Parent=MS.gene014519.t1 |
| Gene Sequence |
| Protein sequence |
