Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014877.t1 | KEH35909.1 | 95 | 416 | 9 | 2 | 1 | 416 | 1 | 404 | 1.30E-218 | 768.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014877.t1 | O04136 | 69.3 | 433 | 77 | 11 | 1 | 383 | 1 | 427 | 6.3e-150 | 531.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014877.t1 | A0A072V1N7 | 95.0 | 416 | 9 | 2 | 1 | 416 | 1 | 404 | 9.1e-219 | 768.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene014877.t1 | TF | HB-KNOX |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene074258 | MS.gene014877 | PPI |
| MS.gene76034 | MS.gene014877 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014877.t1 | MTR_3g106400 | 96.635 | 416 | 2 | 2 | 1 | 416 | 1 | 404 | 0.0 | 830 |
| MS.gene014877.t1 | MTR_3g106400 | 96.345 | 383 | 2 | 2 | 1 | 383 | 1 | 371 | 0.0 | 761 |
| MS.gene014877.t1 | MTR_3g106400 | 96.345 | 383 | 2 | 2 | 1 | 383 | 1 | 371 | 0.0 | 761 |
| MS.gene014877.t1 | MTR_1g012960 | 66.970 | 439 | 86 | 8 | 1 | 383 | 1 | 436 | 0.0 | 557 |
| MS.gene014877.t1 | MTR_2g461240 | 66.006 | 353 | 79 | 6 | 31 | 382 | 42 | 354 | 1.87e-159 | 454 |
| MS.gene014877.t1 | MTR_4g116545 | 78.439 | 269 | 50 | 3 | 117 | 383 | 69 | 331 | 6.22e-152 | 433 |
| MS.gene014877.t1 | MTR_4g116545 | 80.078 | 256 | 43 | 3 | 117 | 370 | 69 | 318 | 1.11e-148 | 426 |
| MS.gene014877.t1 | MTR_5g011070 | 67.033 | 273 | 78 | 3 | 119 | 385 | 28 | 294 | 1.75e-128 | 373 |
| MS.gene014877.t1 | MTR_1g084060 | 35.249 | 261 | 122 | 8 | 119 | 367 | 20 | 245 | 1.43e-30 | 119 |
| MS.gene014877.t1 | MTR_1g084060 | 35.249 | 261 | 122 | 8 | 119 | 367 | 20 | 245 | 2.62e-30 | 119 |
| MS.gene014877.t1 | MTR_2g024390 | 28.102 | 274 | 166 | 4 | 119 | 391 | 118 | 361 | 1.19e-28 | 115 |
| MS.gene014877.t1 | MTR_1g017080 | 32.669 | 251 | 139 | 7 | 119 | 367 | 120 | 342 | 1.60e-25 | 107 |
| MS.gene014877.t1 | MTR_5g033720 | 32.669 | 251 | 138 | 6 | 119 | 367 | 73 | 294 | 3.08e-25 | 105 |
| MS.gene014877.t1 | MTR_5g085860 | 29.032 | 279 | 152 | 7 | 119 | 391 | 47 | 285 | 2.86e-24 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014877.t1 | AT5G25220 | 65.217 | 437 | 80 | 12 | 1 | 383 | 1 | 419 | 0.0 | 511 |
| MS.gene014877.t1 | AT5G25220 | 65.138 | 436 | 80 | 12 | 1 | 382 | 1 | 418 | 3.26e-180 | 509 |
| MS.gene014877.t1 | AT5G11060 | 67.476 | 412 | 74 | 12 | 1 | 382 | 1 | 382 | 6.01e-174 | 492 |
| MS.gene014877.t1 | AT4G32040 | 62.895 | 380 | 126 | 8 | 6 | 383 | 13 | 379 | 4.85e-156 | 446 |
| MS.gene014877.t1 | AT4G32040 | 62.895 | 380 | 126 | 8 | 6 | 383 | 13 | 379 | 8.08e-156 | 445 |
| MS.gene014877.t1 | AT1G62990 | 62.759 | 290 | 99 | 4 | 96 | 382 | 7 | 290 | 5.50e-126 | 366 |
| MS.gene014877.t1 | AT1G70510 | 33.077 | 260 | 137 | 8 | 112 | 367 | 63 | 289 | 2.09e-29 | 117 |
| MS.gene014877.t1 | AT1G23380 | 32.616 | 279 | 143 | 9 | 119 | 389 | 86 | 327 | 9.62e-29 | 115 |
| MS.gene014877.t1 | AT1G70510 | 31.923 | 260 | 144 | 7 | 112 | 367 | 63 | 293 | 5.84e-28 | 112 |
| MS.gene014877.t1 | AT1G23380 | 32.384 | 281 | 143 | 10 | 119 | 389 | 86 | 329 | 7.20e-27 | 110 |
| MS.gene014877.t1 | AT4G08150 | 33.205 | 259 | 130 | 8 | 119 | 367 | 135 | 360 | 9.66e-26 | 108 |
| MS.gene014877.t1 | AT1G62360 | 34.400 | 250 | 135 | 6 | 119 | 367 | 122 | 343 | 2.80e-25 | 106 |
Find 124 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATAGCATGGGAGGATT+TGG | 0.315828 | 3.3:+87360308 | MS.gene014877:CDS |
| TGCCAGCTGAGCGTCGATCC+TGG | 0.345057 | 3.3:-87357809 | None:intergenic |
| CGATGACTTCGCTGTGGTTT+CGG | 0.353018 | 3.3:-87357609 | None:intergenic |
| TGTACCTGTTAGACTTTGTA+AGG | 0.355039 | 3.3:-87358786 | None:intergenic |
| GTACTCTGCGTTAGGACAAC+AGG | 0.363398 | 3.3:+87357855 | MS.gene014877:CDS |
| CTTTCCAAACTGCACCTAAC+TGG | 0.380352 | 3.3:+87357446 | MS.gene014877:CDS |
| AATTGAAACAGATCAATAAC+TGG | 0.381851 | 3.3:+87361294 | MS.gene014877:CDS |
| GTTGTTGTTGTTCTGTGAAA+TGG | 0.389827 | 3.3:-87357396 | None:intergenic |
| TGCCTTTCAGGAAGAGGATA+AGG | 0.392331 | 3.3:+87361244 | MS.gene014877:intron |
| CAGTCCTTACAAAGTCTAAC+AGG | 0.396414 | 3.3:+87358782 | MS.gene014877:CDS |
| GAGCGTCGATCCTGGGCAAC+TGG | 0.397329 | 3.3:-87357801 | None:intergenic |
| TAAACAACTCGACCACTTCA+TGG | 0.399427 | 3.3:+87357900 | MS.gene014877:CDS |
| GAGCCATTGACCGGAGGATT+GGG | 0.403988 | 3.3:-87357569 | None:intergenic |
| GCAAGGTTGGTGCAAGAAAC+CGG | 0.410624 | 3.3:+87361266 | MS.gene014877:CDS |
| TGGTGTCGAGGTTGCGAAGA+AGG | 0.418558 | 3.3:-87357480 | None:intergenic |
| AGACGAGCTGGAAAACTTCC+TGG | 0.420513 | 3.3:+87360687 | MS.gene014877:CDS |
| AGTGATGTTAATCTGTTTGA+TGG | 0.421723 | 3.3:+87360269 | MS.gene014877:CDS |
| AGGGCGTTGTTGAGCCAGTT+AGG | 0.423606 | 3.3:-87357460 | None:intergenic |
| TGAGCCAGTTAGGTGCAGTT+TGG | 0.424789 | 3.3:-87357450 | None:intergenic |
| GGAAGCAGTAATGGCTTGTT+GGG | 0.426655 | 3.3:+87358751 | MS.gene014877:CDS |
| GTTCCCAATCCTCCGGTCAA+TGG | 0.427348 | 3.3:+87357566 | MS.gene014877:CDS |
| AATGGTGGAGTGGGTTGTCT+TGG | 0.431285 | 3.3:-87357378 | None:intergenic |
| TGGAAGCAGTAATGGCTTGT+TGG | 0.435199 | 3.3:+87358750 | MS.gene014877:CDS |
| ATCCTGGGCAACTGGTCAAC+CGG | 0.438877 | 3.3:-87357793 | None:intergenic |
| TCAATCAAAGGAAGAGGAAC+TGG | 0.439251 | 3.3:+87361321 | MS.gene014877:CDS |
| GAAGTTGGTACTGTTGTTGT+TGG | 0.439599 | 3.3:-87357524 | None:intergenic |
| GCCCAGGATCGACGCTCAGC+TGG | 0.442737 | 3.3:+87357807 | MS.gene014877:CDS |
| GAAACACAAAGGTGAAATAA+TGG | 0.443665 | 3.3:+87357711 | MS.gene014877:CDS |
| TAATCTGTTTGATGGAGGTT+TGG | 0.446200 | 3.3:+87360277 | MS.gene014877:CDS |
| AGAGCCATTGACCGGAGGAT+TGG | 0.446472 | 3.3:-87357570 | None:intergenic |
| GCCAGCTGAGCGTCGATCCT+GGG | 0.452139 | 3.3:-87357808 | None:intergenic |
| GGTACTGTTGTTGTTGGTTG+TGG | 0.453246 | 3.3:-87357518 | None:intergenic |
| ATTAAAGCATGAGTTGAAAC+AGG | 0.455099 | 3.3:+87360385 | MS.gene014877:CDS |
| ATAGAAGCTGTTCATACAAC+GGG | 0.456842 | 3.3:-87357738 | None:intergenic |
| CTTCGCTGTGGTTTCGGTGG+AGG | 0.457682 | 3.3:-87357603 | None:intergenic |
| TTGTCCTAACGCAGAGTACT+TGG | 0.459203 | 3.3:-87357851 | None:intergenic |
| AACCGGCGGTGTCGAGGTTG+AGG | 0.460908 | 3.3:-87357546 | None:intergenic |
| CAGCGGAGGGAGTGATGAAC+TGG | 0.464161 | 3.3:+87357680 | MS.gene014877:CDS |
| CGCCGGTTGACCAGTTGCCC+AGG | 0.465203 | 3.3:+87357791 | MS.gene014877:CDS |
| CAACCTCAGTACTTAAAGAT+TGG | 0.466078 | 3.3:+87360715 | MS.gene014877:CDS |
| TTCAACGCATTAGAAGTTGA+AGG | 0.469895 | 3.3:-87361353 | None:intergenic |
| GTTGTTGTTGGTTGTGGCGG+TGG | 0.469972 | 3.3:-87357512 | None:intergenic |
| CCATGCAATGGAAGCAGTAA+TGG | 0.471444 | 3.3:+87358742 | MS.gene014877:CDS |
| GTTGCTCCTGTACCTTCCCC+TGG | 0.471752 | 3.3:-87360215 | None:intergenic |
| CTGTTTGATGGAGGTTTGGA+TGG | 0.472583 | 3.3:+87360281 | MS.gene014877:CDS |
| CTGTGGTTTCGGTGGAGGAC+AGG | 0.484561 | 3.3:-87357598 | None:intergenic |
| CATGGACTCGGACATGTTGT+TGG | 0.486135 | 3.3:-87358724 | None:intergenic |
| AGAGTTCTTACAGTAGGATA+AGG | 0.489180 | 3.3:-87360759 | None:intergenic |
| CGTCACCGGCGCTGGTATGA+AGG | 0.491895 | 3.3:+87357636 | MS.gene014877:CDS |
| GTTGCCAAGTACTCTGCGTT+AGG | 0.491986 | 3.3:+87357847 | MS.gene014877:CDS |
| GTTTCACCAGGGGAAGGTAC+AGG | 0.498577 | 3.3:+87360209 | MS.gene014877:CDS |
| AGTACTGAGGTTGTGTCACC+AGG | 0.501554 | 3.3:-87360705 | None:intergenic |
| CCATTACTGCTTCCATTGCA+TGG | 0.504180 | 3.3:-87358742 | None:intergenic |
| AGGACGGGAGAGCCATTGAC+CGG | 0.509843 | 3.3:-87357578 | None:intergenic |
| GTTCTGTGAAATGGTGGAGT+GGG | 0.511127 | 3.3:-87357387 | None:intergenic |
| AAGCGGTGAGGCAACAGCGG+AGG | 0.511964 | 3.3:+87357666 | MS.gene014877:CDS |
| GCAAATTTAAGATTATGAAA+AGG | 0.513629 | 3.3:-87361415 | None:intergenic |
| GTTTCGGTGGAGGACAGGAC+GGG | 0.513862 | 3.3:-87357593 | None:intergenic |
| CTGCTTCCATTGCATGGACT+CGG | 0.514678 | 3.3:-87358736 | None:intergenic |
| TTGACCGGAGGATTGGGAAC+CGG | 0.515320 | 3.3:-87357563 | None:intergenic |
| TGTTGCCTCACCGCTTTCCT+CGG | 0.515416 | 3.3:-87357659 | None:intergenic |
| ACTTATTTCTAATTCAAGAT+CGG | 0.521991 | 3.3:-87361450 | None:intergenic |
| TCATTCTCTGTTAGAACAAG+AGG | 0.524064 | 3.3:-87360332 | None:intergenic |
| GGTGTCGAGGTTGCGAAGAA+GGG | 0.525959 | 3.3:-87357479 | None:intergenic |
| GAAAATTGTGGACATAAGAG+AGG | 0.527462 | 3.3:+87360650 | MS.gene014877:CDS |
| GGTGTCGAGGTTGAGGAAGT+TGG | 0.532035 | 3.3:-87357539 | None:intergenic |
| ATTGGGAACCGGCGGTGTCG+AGG | 0.533014 | 3.3:-87357552 | None:intergenic |
| CGTTGAAGAGCAAGCGCAAG+AGG | 0.539470 | 3.3:+87361369 | MS.gene014877:CDS |
| CTCGGCCTTCATACCAGCGC+CGG | 0.539817 | 3.3:-87357641 | None:intergenic |
| GGTTTCGGTGGAGGACAGGA+CGG | 0.540180 | 3.3:-87357594 | None:intergenic |
| GGAAGAGGATAAGGCAAGGT+TGG | 0.540633 | 3.3:+87361253 | MS.gene014877:intron |
| GTTGTTGTTCTGTGAAATGG+TGG | 0.541053 | 3.3:-87357393 | None:intergenic |
| GAGTGGTGAGGATCGGAGGT+TGG | 0.542790 | 3.3:-87357424 | None:intergenic |
| CCTCAGTACTTAAAGATTGG+TGG | 0.548243 | 3.3:+87360718 | MS.gene014877:CDS |
| GAAAGAGTGGTGAGGATCGG+AGG | 0.551627 | 3.3:-87357428 | None:intergenic |
| ATCGACGACGTCACCGGCGC+TGG | 0.555704 | 3.3:+87357628 | MS.gene014877:CDS |
| GAATTAGAAATAAGTAATGC+AGG | 0.558191 | 3.3:+87361458 | MS.gene014877:CDS |
| AGCGGTGAGGCAACAGCGGA+GGG | 0.559972 | 3.3:+87357667 | MS.gene014877:CDS |
| CGGCGCTGGTATGAAGGCCG+AGG | 0.563738 | 3.3:+87357642 | MS.gene014877:CDS |
| AGAGAATGAGAGGTCCCTCA+TGG | 0.567340 | 3.3:+87360346 | MS.gene014877:CDS |
| ATAACTGGTTTATCAATCAA+AGG | 0.567448 | 3.3:+87361309 | MS.gene014877:CDS |
| TGTTCTGTGAAATGGTGGAG+TGG | 0.567991 | 3.3:-87357388 | None:intergenic |
| CAAGGTTGGTGCAAGAAACC+GGG | 0.570646 | 3.3:+87361267 | MS.gene014877:CDS |
| ACCGCCGGTTCCCAATCCTC+CGG | 0.570735 | 3.3:+87357559 | MS.gene014877:CDS |
| GAAGTCATCGACGACGTCAC+CGG | 0.571705 | 3.3:+87357622 | MS.gene014877:CDS |
| TTCCTCAACCTCGACACCGC+CGG | 0.572536 | 3.3:+87357544 | MS.gene014877:CDS |
| TGACTTCGCTGTGGTTTCGG+TGG | 0.576108 | 3.3:-87357606 | None:intergenic |
| GGTTTATCAATCAAAGGAAG+AGG | 0.579093 | 3.3:+87361315 | MS.gene014877:CDS |
| TTGGAAAGAGTGGTGAGGAT+CGG | 0.583594 | 3.3:-87357431 | None:intergenic |
| GATGGTTCAGATAATAGCAT+GGG | 0.585141 | 3.3:+87360299 | MS.gene014877:CDS |
| CCACCAATCTTTAAGTACTG+AGG | 0.588799 | 3.3:-87360718 | None:intergenic |
| AAAGGTAAAATACCATGAAG+TGG | 0.598924 | 3.3:-87357912 | None:intergenic |
| TAGGTGCAGTTTGGAAAGAG+TGG | 0.600373 | 3.3:-87357441 | None:intergenic |
| TGGCGTTGACGTTGGTGTCG+AGG | 0.601937 | 3.3:-87357492 | None:intergenic |
| GGATGGTTCAGATAATAGCA+TGG | 0.605053 | 3.3:+87360298 | MS.gene014877:CDS |
| GGGTTATAAAGAGAAAATTG+TGG | 0.610746 | 3.3:+87360638 | MS.gene014877:intron |
| TTGTTCTAACAGAGAATGAG+AGG | 0.611125 | 3.3:+87360336 | MS.gene014877:CDS |
| TGTGGCGGTGGCGTTGACGT+TGG | 0.611369 | 3.3:-87357500 | None:intergenic |
| GGTTCAGATAATAGCATGGG+AGG | 0.618498 | 3.3:+87360302 | MS.gene014877:CDS |
| GATGTTAATCTGTTTGATGG+AGG | 0.621633 | 3.3:+87360272 | MS.gene014877:CDS |
| TGTGTAACAGGAGTTTCACC+AGG | 0.621894 | 3.3:+87360197 | MS.gene014877:intron |
| GATCTGTTTCAATTGCAACC+CGG | 0.623157 | 3.3:-87361285 | None:intergenic |
| ACCGGAGGATTGGGAACCGG+CGG | 0.625286 | 3.3:-87357560 | None:intergenic |
| GGAAAGCGGTGAGGCAACAG+CGG | 0.626255 | 3.3:+87357663 | MS.gene014877:CDS |
| GGGCAACTGGTCAACCGGCG+TGG | 0.628223 | 3.3:-87357788 | None:intergenic |
| ATGTCTTACACGTTCCATGA+GGG | 0.635061 | 3.3:-87360360 | None:intergenic |
| ACAGGAGTTTCACCAGGGGA+AGG | 0.636992 | 3.3:+87360203 | MS.gene014877:intron |
| ACATGTCCGAGTCCATGCAA+TGG | 0.642083 | 3.3:+87358730 | MS.gene014877:CDS |
| ACTGTTGTTGTTGGTTGTGG+CGG | 0.642777 | 3.3:-87357515 | None:intergenic |
| CATGTCTTACACGTTCCATG+AGG | 0.645094 | 3.3:-87360361 | None:intergenic |
| GATAGAAGCTGTTCATACAA+CGG | 0.647941 | 3.3:-87357739 | None:intergenic |
| TACTCTGCGTTAGGACAACA+GGG | 0.650241 | 3.3:+87357856 | MS.gene014877:CDS |
| GGTATGAAGGCCGAGGAAAG+CGG | 0.652275 | 3.3:+87357649 | MS.gene014877:CDS |
| ACGGGAGAGCCATTGACCGG+AGG | 0.652694 | 3.3:-87357575 | None:intergenic |
| GTGTTTGAGAATCGCCACGC+CGG | 0.654940 | 3.3:+87357774 | MS.gene014877:CDS |
| TTCAGGAAGAGGATAAGGCA+AGG | 0.655439 | 3.3:+87361249 | MS.gene014877:intron |
| AATGCAGGTGATAAAAGTGA+CGG | 0.675503 | 3.3:+87361473 | MS.gene014877:CDS |
| GGTGGCAATCACATTCAAAG+TGG | 0.680210 | 3.3:+87360736 | MS.gene014877:CDS |
| TGGCAGAAAGCGAAACACAA+AGG | 0.682726 | 3.3:+87357700 | MS.gene014877:CDS |
| GCAGTTTGGAAAGAGTGGTG+AGG | 0.695329 | 3.3:-87357436 | None:intergenic |
| CGTCGTCGATGACTTCGCTG+TGG | 0.697602 | 3.3:-87357615 | None:intergenic |
| GTGTAACAGGAGTTTCACCA+GGG | 0.706920 | 3.3:+87360198 | MS.gene014877:intron |
| GAAGGCCGAGGAAAGCGGTG+AGG | 0.708487 | 3.3:+87357654 | MS.gene014877:CDS |
| TGTAACAGGAGTTTCACCAG+GGG | 0.775474 | 3.3:+87360199 | MS.gene014877:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATAATAATGATTAGT+GGG | - | chr3.3:87361202-87361221 | None:intergenic | 10.0% |
| !!! | AATTTTTTGCAATAATATTT+TGG | + | chr3.3:87358480-87358499 | MS.gene014877:intron | 10.0% |
| !!! | ATTACAATATTTTTTTTGTA+TGG | + | chr3.3:87358424-87358443 | MS.gene014877:intron | 10.0% |
| !! | AATGATAATTAAGATCTTAA+TGG | + | chr3.3:87359133-87359152 | MS.gene014877:intron | 15.0% |
| !! | AATTTATTAGTAAGATAGAA+TGG | + | chr3.3:87359927-87359946 | MS.gene014877:intron | 15.0% |
| !! | CTAAAAATAATAATGATTAG+TGG | - | chr3.3:87361203-87361222 | None:intergenic | 15.0% |
| !! | CTAATAAATTATTCATTATG+TGG | - | chr3.3:87359917-87359936 | None:intergenic | 15.0% |
| !! | TTTGTAAATATTATTGAGAA+AGG | - | chr3.3:87357933-87357952 | None:intergenic | 15.0% |
| !!! | AAGTTTTTATAGGAAAAAAT+AGG | + | chr3.3:87358940-87358959 | MS.gene014877:intron | 15.0% |
| !!! | ATTTATACTTTTCTCAATAT+AGG | + | chr3.3:87359034-87359053 | MS.gene014877:intron | 15.0% |
| !!! | ATTTTTTTATTTTTTTGTCG+TGG | + | chr3.3:87358559-87358578 | MS.gene014877:intron | 15.0% |
| !! | AAAATAATTAAGGTAGCTAA+TGG | + | chr3.3:87358252-87358271 | MS.gene014877:intron | 20.0% |
| !! | AAATAACATGCTAAAAAGTA+AGG | - | chr3.3:87360040-87360059 | None:intergenic | 20.0% |
| !! | AATTAGTACTCATATCTAAT+GGG | - | chr3.3:87360156-87360175 | None:intergenic | 20.0% |
| !! | GATTACATTAAATGTTGAAT+AGG | + | chr3.3:87360421-87360440 | MS.gene014877:intron | 20.0% |
| !! | GGTGTATATATGAATTATTT+GGG | + | chr3.3:87359356-87359375 | MS.gene014877:intron | 20.0% |
| !! | TAAATTATTCATGACGTATT+TGG | - | chr3.3:87359441-87359460 | None:intergenic | 20.0% |
| !! | TAATTAGTACTCATATCTAA+TGG | - | chr3.3:87360157-87360176 | None:intergenic | 20.0% |
| !! | TATGTTAAAATAAGCTCAAA+AGG | - | chr3.3:87358319-87358338 | None:intergenic | 20.0% |
| !! | TTCTCAATATAGGAATTATA+CGG | + | chr3.3:87359044-87359063 | MS.gene014877:intron | 20.0% |
| !!! | ACAATATTTTTTTTGTATGG+TGG | + | chr3.3:87358427-87358446 | MS.gene014877:intron | 20.0% |
| !!! | ACTTATTTCTAATTCAAGAT+CGG | - | chr3.3:87361453-87361472 | None:intergenic | 20.0% |
| !!! | AGAATTTATTTTCTGTTGTA+TGG | + | chr3.3:87358625-87358644 | MS.gene014877:intron | 20.0% |
| !!! | ATATATGAATTATTTGGGTT+AGG | + | chr3.3:87359361-87359380 | MS.gene014877:intron | 20.0% |
| !!! | CATATTGATTAATATCCAAT+TGG | - | chr3.3:87359710-87359729 | None:intergenic | 20.0% |
| !!! | GCAAAACTTAAATTTTAACT+CGG | + | chr3.3:87358082-87358101 | MS.gene014877:intron | 20.0% |
| !!! | GCAAATTTAAGATTATGAAA+AGG | - | chr3.3:87361418-87361437 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAAACTACATTTT+AGG | + | chr3.3:87359232-87359251 | MS.gene014877:intron | 20.0% |
| !!! | TATATGAATTATTTGGGTTA+GGG | + | chr3.3:87359362-87359381 | MS.gene014877:intron | 20.0% |
| !!! | TTTTTGCAATAATATTTTGG+CGG | + | chr3.3:87358483-87358502 | MS.gene014877:intron | 20.0% |
| ! | AAAGTCCAAACAATTCATAT+GGG | - | chr3.3:87359834-87359853 | None:intergenic | 25.0% |
| ! | AACATCATAGTTATACTGTA+TGG | + | chr3.3:87359980-87359999 | MS.gene014877:intron | 25.0% |
| ! | AACATTTAATGTAATCCATG+AGG | - | chr3.3:87360417-87360436 | None:intergenic | 25.0% |
| ! | AAGCTATCTTAGATATCTTA+CGG | + | chr3.3:87361047-87361066 | MS.gene014877:intron | 25.0% |
| ! | AATTCTGTCAAAAAAAAGCA+AGG | - | chr3.3:87360015-87360034 | None:intergenic | 25.0% |
| ! | AATTGAAACAGATCAATAAC+TGG | + | chr3.3:87361294-87361313 | MS.gene014877:CDS | 25.0% |
| ! | ACAATTCTGTCAAAAAAACA+AGG | - | chr3.3:87359588-87359607 | None:intergenic | 25.0% |
| ! | AGGAATAAGCAACAAAAATT+TGG | - | chr3.3:87358900-87358919 | None:intergenic | 25.0% |
| ! | ATATGAATTGTTTGGACTTT+GGG | + | chr3.3:87359834-87359853 | MS.gene014877:intron | 25.0% |
| ! | CATTAAATGTTGAATAGGAA+AGG | + | chr3.3:87360426-87360445 | MS.gene014877:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr3.3:87359257-87359276 | MS.gene014877:intron | 25.0% |
| ! | CATTCGTGTAATTTATCTTT+AGG | - | chr3.3:87358920-87358939 | None:intergenic | 25.0% |
| ! | GAATTAGAAATAAGTAATGC+AGG | + | chr3.3:87361458-87361477 | MS.gene014877:CDS | 25.0% |
| ! | GGGTGTATATATGAATTATT+TGG | + | chr3.3:87359355-87359374 | MS.gene014877:intron | 25.0% |
| ! | GTATCTATATTCAAAGTACA+TGG | - | chr3.3:87360073-87360092 | None:intergenic | 25.0% |
| ! | TAAATATTTGAGAACCTGAT+TGG | - | chr3.3:87361102-87361121 | None:intergenic | 25.0% |
| ! | TCTCAATATAGGAATTATAC+GGG | + | chr3.3:87359045-87359064 | MS.gene014877:intron | 25.0% |
| ! | TTTCAGATTCAAAACATACT+TGG | + | chr3.3:87360817-87360836 | MS.gene014877:intron | 25.0% |
| !! | AACATTTTATAGATCCAATC+AGG | + | chr3.3:87361085-87361104 | MS.gene014877:intron | 25.0% |
| !! | ACTGAAAATAAGTCTAAAGT+AGG | + | chr3.3:87358209-87358228 | MS.gene014877:intron | 25.0% |
| !! | ATAACTGGTTTATCAATCAA+AGG | + | chr3.3:87361309-87361328 | MS.gene014877:CDS | 25.0% |
| !! | TACACGAATGAAGTTTTTAT+AGG | + | chr3.3:87358930-87358949 | MS.gene014877:intron | 25.0% |
| !! | TATTTTCTGTTGTATGGTTA+CGG | + | chr3.3:87358631-87358650 | MS.gene014877:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | + | chr3.3:87359331-87359350 | MS.gene014877:intron | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | - | chr3.3:87359222-87359241 | None:intergenic | 25.0% |
| !!! | AACATGTGAACTATTTTGAA+TGG | - | chr3.3:87361149-87361168 | None:intergenic | 25.0% |
| !!! | ACAAGTTAGCTAATCTTTTT+TGG | - | chr3.3:87359650-87359669 | None:intergenic | 25.0% |
| !!! | CAATTTCACTTTTGCAAAAA+AGG | - | chr3.3:87358127-87358146 | None:intergenic | 25.0% |
| !!! | GTATGTTTTGAATCTGAAAA+AGG | - | chr3.3:87360816-87360835 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTGGATAATAGTT+TGG | - | chr3.3:87359635-87359654 | None:intergenic | 25.0% |
| AAAAAAAAGCAAGGACAACT+GGG | - | chr3.3:87360006-87360025 | None:intergenic | 30.0% | |
| AAAACATAATTACCCTCCAT+TGG | - | chr3.3:87358539-87358558 | None:intergenic | 30.0% | |
| AAAGGTAAAATACCATGAAG+TGG | - | chr3.3:87357915-87357934 | None:intergenic | 30.0% | |
| AAATTTGTGTCTACAGTAAC+TGG | - | chr3.3:87358594-87358613 | None:intergenic | 30.0% | |
| AAGTGAAATTGAAACATGCA+CGG | + | chr3.3:87358136-87358155 | MS.gene014877:intron | 30.0% | |
| AGTAATAATCAAGCCCTTAA+TGG | + | chr3.3:87359756-87359775 | MS.gene014877:intron | 30.0% | |
| AGTCATTCATGCATAGTAAT+AGG | - | chr3.3:87358192-87358211 | None:intergenic | 30.0% | |
| AGTGATGTTAATCTGTTTGA+TGG | + | chr3.3:87360269-87360288 | MS.gene014877:CDS | 30.0% | |
| ATTCAAAGTACATGGTAGTT+TGG | - | chr3.3:87360065-87360084 | None:intergenic | 30.0% | |
| ATTCATGACGTATTTGGTAT+AGG | - | chr3.3:87359435-87359454 | None:intergenic | 30.0% | |
| CAAAGTCCAAACAATTCATA+TGG | - | chr3.3:87359835-87359854 | None:intergenic | 30.0% | |
| CAATATAGAGTTCTTACAGT+AGG | - | chr3.3:87360768-87360787 | None:intergenic | 30.0% | |
| CATATGAATTGTTTGGACTT+TGG | + | chr3.3:87359833-87359852 | MS.gene014877:intron | 30.0% | |
| CATTCATTTAATGATGCACA+TGG | - | chr3.3:87359296-87359315 | None:intergenic | 30.0% | |
| CTCAATATAGGAATTATACG+GGG | + | chr3.3:87359046-87359065 | MS.gene014877:intron | 30.0% | |
| CTTTGACTATCAACCATTAA+GGG | - | chr3.3:87359149-87359168 | None:intergenic | 30.0% | |
| GAAACACAAAGGTGAAATAA+TGG | + | chr3.3:87357711-87357730 | MS.gene014877:CDS | 30.0% | |
| GCTGTTATAGTTATACTGTA+TGG | + | chr3.3:87359553-87359572 | MS.gene014877:intron | 30.0% | |
| GGGTTATAAAGAGAAAATTG+TGG | + | chr3.3:87360638-87360657 | MS.gene014877:intron | 30.0% | |
| GTCATTCATGCATAGTAATA+GGG | - | chr3.3:87358191-87358210 | None:intergenic | 30.0% | |
| TAATTCATATATACACCCTC+CGG | - | chr3.3:87359353-87359372 | None:intergenic | 30.0% | |
| TCAAAAAAACAAGGACAACT+GGG | - | chr3.3:87359579-87359598 | None:intergenic | 30.0% | |
| TGTGTTGAAACTTGAAATGA+TGG | - | chr3.3:87360493-87360512 | None:intergenic | 30.0% | |
| ! | ATTAAAGCATGAGTTGAAAC+AGG | + | chr3.3:87360385-87360404 | MS.gene014877:CDS | 30.0% |
| ! | GTTACTGTAGACACAAATTT+TGG | + | chr3.3:87358594-87358613 | MS.gene014877:intron | 30.0% |
| ! | TGTCAATTAATGGATGGAAA+TGG | + | chr3.3:87357998-87358017 | MS.gene014877:intron | 30.0% |
| ! | TTAATGGATGGAAATGGATT+TGG | + | chr3.3:87358004-87358023 | MS.gene014877:intron | 30.0% |
| !! | TTAATGGTTGATAGTCAAAG+AGG | + | chr3.3:87359149-87359168 | MS.gene014877:intron | 30.0% |
| !!! | AGTTAGCTAATCTTTTTTGG+TGG | - | chr3.3:87359647-87359666 | None:intergenic | 30.0% |
| !!! | CATACATCACTTTTTCCAAT+TGG | + | chr3.3:87359692-87359711 | MS.gene014877:intron | 30.0% |
| !!! | CCTTTTGAGCTTATTTTAAC+CGG | + | chr3.3:87358316-87358335 | MS.gene014877:intron | 30.0% |
| AAGCTTTGCGTGTCAATTAA+TGG | + | chr3.3:87357988-87358007 | MS.gene014877:intron | 35.0% | |
| AATGCAGGTGATAAAAGTGA+CGG | + | chr3.3:87361473-87361492 | MS.gene014877:CDS | 35.0% | |
| AGAGTTCTTACAGTAGGATA+AGG | - | chr3.3:87360762-87360781 | None:intergenic | 35.0% | |
| ATAATAACATGCTACGAGCA+AGG | - | chr3.3:87359611-87359630 | None:intergenic | 35.0% | |
| ATAGAAGCTGTTCATACAAC+GGG | - | chr3.3:87357741-87357760 | None:intergenic | 35.0% | |
| CAAAAAAAAGCAAGGACAAC+TGG | - | chr3.3:87360007-87360026 | None:intergenic | 35.0% | |
| CAAACAATTCATATGGGACA+AGG | - | chr3.3:87359828-87359847 | None:intergenic | 35.0% | |
| CAACCTCAGTACTTAAAGAT+TGG | + | chr3.3:87360715-87360734 | MS.gene014877:CDS | 35.0% | |
| CATGTTAAGATAGGCTCAAA+AGG | - | chr3.3:87358289-87358308 | None:intergenic | 35.0% | |
| CCATTCTCTAATACACGTTT+CGG | - | chr3.3:87360600-87360619 | None:intergenic | 35.0% | |
| CCGGTTAAAATAAGCTCAAA+AGG | - | chr3.3:87358349-87358368 | None:intergenic | 35.0% | |
| CCTTTGACTATCAACCATTA+AGG | - | chr3.3:87359773-87359792 | None:intergenic | 35.0% | |
| CGAAACGTGTATTAGAGAAT+GGG | + | chr3.3:87360598-87360617 | MS.gene014877:intron | 35.0% | |
| CTTGTCCCATATGAATTGTT+TGG | + | chr3.3:87359826-87359845 | MS.gene014877:intron | 35.0% | |
| GAAAATTGTGGACATAAGAG+AGG | + | chr3.3:87360650-87360669 | MS.gene014877:CDS | 35.0% | |
| GATACATAAATCCTTGCCAA+TGG | + | chr3.3:87358520-87358539 | MS.gene014877:intron | 35.0% | |
| GATAGAAGCTGTTCATACAA+CGG | - | chr3.3:87357742-87357761 | None:intergenic | 35.0% | |
| GATGGTTCAGATAATAGCAT+GGG | + | chr3.3:87360299-87360318 | MS.gene014877:CDS | 35.0% | |
| GATGTTAATCTGTTTGATGG+AGG | + | chr3.3:87360272-87360291 | MS.gene014877:CDS | 35.0% | |
| GGTCAAGTTCATGTTAAGAT+AGG | - | chr3.3:87358298-87358317 | None:intergenic | 35.0% | |
| GGTTTATCAATCAAAGGAAG+AGG | + | chr3.3:87361315-87361334 | MS.gene014877:CDS | 35.0% | |
| GTCAAAAAAACAAGGACAAC+TGG | - | chr3.3:87359580-87359599 | None:intergenic | 35.0% | |
| TAATCTGTTTGATGGAGGTT+TGG | + | chr3.3:87360277-87360296 | MS.gene014877:CDS | 35.0% | |
| TCATGCATAGTAATAGGGAA+AGG | - | chr3.3:87358186-87358205 | None:intergenic | 35.0% | |
| TCATTCTCTGTTAGAACAAG+AGG | - | chr3.3:87360335-87360354 | None:intergenic | 35.0% | |
| TGTACCTGTTAGACTTTGTA+AGG | - | chr3.3:87358789-87358808 | None:intergenic | 35.0% | |
| TTAACCGGCATGTTTATGTA+GGG | + | chr3.3:87358361-87358380 | MS.gene014877:intron | 35.0% | |
| TTGTTCTAACAGAGAATGAG+AGG | + | chr3.3:87360336-87360355 | MS.gene014877:CDS | 35.0% | |
| TTTAACCGGCATGTTTATGT+AGG | + | chr3.3:87358360-87358379 | MS.gene014877:intron | 35.0% | |
| TTTATCTCCACATGTGTAAC+AGG | + | chr3.3:87360185-87360204 | MS.gene014877:intron | 35.0% | |
| TTTGCGTGTCAATTAATGGA+TGG | + | chr3.3:87357992-87358011 | MS.gene014877:intron | 35.0% | |
| ! | AATTGTTTGGACTTTGGGTT+AGG | + | chr3.3:87359839-87359858 | MS.gene014877:intron | 35.0% |
| ! | ATTGTTTGGACTTTGGGTTA+GGG | + | chr3.3:87359840-87359859 | MS.gene014877:intron | 35.0% |
| ! | GTATGTTTTCGGTTCAGTAT+AGG | + | chr3.3:87358985-87359004 | MS.gene014877:intron | 35.0% |
| ! | GTTGTTGTTGTTCTGTGAAA+TGG | - | chr3.3:87357399-87357418 | None:intergenic | 35.0% |
| ! | TGGAAAATTTTCTCTCTCTC+TGG | + | chr3.3:87358024-87358043 | MS.gene014877:intron | 35.0% |
| !! | CCTTAATGGTTGATAGTCAA+AGG | + | chr3.3:87359770-87359789 | MS.gene014877:intron | 35.0% |
| !! | TAATGGTTGATAGTCAAAGG+AGG | + | chr3.3:87359773-87359792 | MS.gene014877:intron | 35.0% |
| !!! | GGGTTGCTCTTATTTTTGTA+GGG | + | chr3.3:87360618-87360637 | MS.gene014877:intron | 35.0% |
| !!! | TGGGTTGCTCTTATTTTTGT+AGG | + | chr3.3:87360617-87360636 | MS.gene014877:intron | 35.0% |
| AACTCCCTACATAAACATGC+CGG | - | chr3.3:87358368-87358387 | None:intergenic | 40.0% | |
| ACATAAATCCTTGCCAATGG+AGG | + | chr3.3:87358523-87358542 | MS.gene014877:intron | 40.0% | |
| ACTGAACCGAAAACATACTG+CGG | - | chr3.3:87358983-87359002 | None:intergenic | 40.0% | |
| ATAATTACCCTCCATTGGCA+AGG | - | chr3.3:87358534-87358553 | None:intergenic | 40.0% | |
| ATGTCTTACACGTTCCATGA+GGG | - | chr3.3:87360363-87360382 | None:intergenic | 40.0% | |
| CAATTCATATGGGACAAGGA+AGG | - | chr3.3:87359824-87359843 | None:intergenic | 40.0% | |
| CAGTCCTTACAAAGTCTAAC+AGG | + | chr3.3:87358782-87358801 | MS.gene014877:CDS | 40.0% | |
| CATAAATCCTTGCCAATGGA+GGG | + | chr3.3:87358524-87358543 | MS.gene014877:intron | 40.0% | |
| CCGAAACGTGTATTAGAGAA+TGG | + | chr3.3:87360597-87360616 | MS.gene014877:intron | 40.0% | |
| CCTCAGTACTTAAAGATTGG+TGG | + | chr3.3:87360718-87360737 | MS.gene014877:CDS | 40.0% | |
| GATAATAGCATGGGAGGATT+TGG | + | chr3.3:87360308-87360327 | MS.gene014877:CDS | 40.0% | |
| GATATGTGTTTGTGCCTTTC+AGG | + | chr3.3:87361232-87361251 | MS.gene014877:intron | 40.0% | |
| GATCTGTTTCAATTGCAACC+CGG | - | chr3.3:87361288-87361307 | None:intergenic | 40.0% | |
| GCTTGATCATAGACAAGCAA+GGG | - | chr3.3:87360916-87360935 | None:intergenic | 40.0% | |
| GGATGGTTCAGATAATAGCA+TGG | + | chr3.3:87360298-87360317 | MS.gene014877:CDS | 40.0% | |
| TAAACAACTCGACCACTTCA+TGG | + | chr3.3:87357900-87357919 | MS.gene014877:CDS | 40.0% | |
| TATCCCAATATGAGACCCTA+TGG | - | chr3.3:87359011-87359030 | None:intergenic | 40.0% | |
| TCAAAGAGGAACATGACTAC+AGG | + | chr3.3:87359163-87359182 | MS.gene014877:intron | 40.0% | |
| TCAATCAAAGGAAGAGGAAC+TGG | + | chr3.3:87361321-87361340 | MS.gene014877:CDS | 40.0% | |
| TGAAACTCCTGTTACACATG+TGG | - | chr3.3:87360195-87360214 | None:intergenic | 40.0% | |
| TGATAGTCAAAGGAGGAACA+TGG | + | chr3.3:87359780-87359799 | MS.gene014877:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr3.3:87359335-87359354 | MS.gene014877:intron | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | - | chr3.3:87359218-87359237 | None:intergenic | 40.0% | |
| TGCTTGATCATAGACAAGCA+AGG | - | chr3.3:87360917-87360936 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr3.3:87359334-87359353 | MS.gene014877:intron | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | - | chr3.3:87359219-87359238 | None:intergenic | 40.0% | |
| TTTATGTATCGAAGCTCGCA+TGG | - | chr3.3:87358510-87358529 | None:intergenic | 40.0% | |
| ! | AGCATGAGTTGAAACAGGTA+CGG | + | chr3.3:87360390-87360409 | MS.gene014877:intron | 40.0% |
| ! | CCACCAATCTTTAAGTACTG+AGG | - | chr3.3:87360721-87360740 | None:intergenic | 40.0% |
| ! | GTTGTTGTTCTGTGAAATGG+TGG | - | chr3.3:87357396-87357415 | None:intergenic | 40.0% |
| !! | GAAGTTGGTACTGTTGTTGT+TGG | - | chr3.3:87357527-87357546 | None:intergenic | 40.0% |
| AGGCCATAGGGTCTCATATT+GGG | + | chr3.3:87359005-87359024 | MS.gene014877:intron | 45.0% | |
| CATGTCTTACACGTTCCATG+AGG | - | chr3.3:87360364-87360383 | None:intergenic | 45.0% | |
| CCATGCAATGGAAGCAGTAA+TGG | + | chr3.3:87358742-87358761 | MS.gene014877:CDS | 45.0% | |
| CCATTACTGCTTCCATTGCA+TGG | - | chr3.3:87358745-87358764 | None:intergenic | 45.0% | |
| CTGTTTGATGGAGGTTTGGA+TGG | + | chr3.3:87360281-87360300 | MS.gene014877:CDS | 45.0% | |
| CTTTCCAAACTGCACCTAAC+TGG | + | chr3.3:87357446-87357465 | MS.gene014877:CDS | 45.0% | |
| GGTGGCAATCACATTCAAAG+TGG | + | chr3.3:87360736-87360755 | MS.gene014877:CDS | 45.0% | |
| GGTTCAGATAATAGCATGGG+AGG | + | chr3.3:87360302-87360321 | MS.gene014877:CDS | 45.0% | |
| GTGTAACAGGAGTTTCACCA+GGG | + | chr3.3:87360198-87360217 | MS.gene014877:intron | 45.0% | |
| TACTCTGCGTTAGGACAACA+GGG | + | chr3.3:87357856-87357875 | MS.gene014877:CDS | 45.0% | |
| TAGGCCATAGGGTCTCATAT+TGG | + | chr3.3:87359004-87359023 | MS.gene014877:intron | 45.0% | |
| TAGGTGCAGTTTGGAAAGAG+TGG | - | chr3.3:87357444-87357463 | None:intergenic | 45.0% | |
| TCGGTTCAGTATAGGCCATA+GGG | + | chr3.3:87358993-87359012 | MS.gene014877:intron | 45.0% | |
| TGCCTTATCCTCTTCCTGAA+AGG | - | chr3.3:87361249-87361268 | None:intergenic | 45.0% | |
| TGCCTTTCAGGAAGAGGATA+AGG | + | chr3.3:87361244-87361263 | MS.gene014877:intron | 45.0% | |
| TGGCAGAAAGCGAAACACAA+AGG | + | chr3.3:87357700-87357719 | MS.gene014877:CDS | 45.0% | |
| TGTAACAGGAGTTTCACCAG+GGG | + | chr3.3:87360199-87360218 | MS.gene014877:intron | 45.0% | |
| TGTGTAACAGGAGTTTCACC+AGG | + | chr3.3:87360197-87360216 | MS.gene014877:intron | 45.0% | |
| TGTTTGTGCCTTTCAGGAAG+AGG | + | chr3.3:87361238-87361257 | MS.gene014877:intron | 45.0% | |
| TTCAGGAAGAGGATAAGGCA+AGG | + | chr3.3:87361249-87361268 | MS.gene014877:intron | 45.0% | |
| TTCGGTTCAGTATAGGCCAT+AGG | + | chr3.3:87358992-87359011 | MS.gene014877:intron | 45.0% | |
| TTGGAAAGAGTGGTGAGGAT+CGG | - | chr3.3:87357434-87357453 | None:intergenic | 45.0% | |
| TTTCTCTCTCTCTGGACTCT+GGG | + | chr3.3:87358032-87358051 | MS.gene014877:intron | 45.0% | |
| ! | ACTGTTGTTGTTGGTTGTGG+CGG | - | chr3.3:87357518-87357537 | None:intergenic | 45.0% |
| ! | ATTTTACGCAAGAGACGAGC+TGG | + | chr3.3:87360675-87360694 | MS.gene014877:CDS | 45.0% |
| ! | GGTACTGTTGTTGTTGGTTG+TGG | - | chr3.3:87357521-87357540 | None:intergenic | 45.0% |
| ! | GTTCTGTGAAATGGTGGAGT+GGG | - | chr3.3:87357390-87357409 | None:intergenic | 45.0% |
| ! | TGGAAGCAGTAATGGCTTGT+TGG | + | chr3.3:87358750-87358769 | MS.gene014877:CDS | 45.0% |
| ! | TGTTCTGTGAAATGGTGGAG+TGG | - | chr3.3:87357391-87357410 | None:intergenic | 45.0% |
| ! | TTGTCCTAACGCAGAGTACT+TGG | - | chr3.3:87357854-87357873 | None:intergenic | 45.0% |
| ! | TTTTCTCTCTCTCTGGACTC+TGG | + | chr3.3:87358031-87358050 | MS.gene014877:intron | 45.0% |
| !! | GGAAGCAGTAATGGCTTGTT+GGG | + | chr3.3:87358751-87358770 | MS.gene014877:CDS | 45.0% |
| !! | AATAATTTATAATGATATAA+TGG | + | chr3.3:87359452-87359471 | MS.gene014877:intron | 5.0% |
| !! | CTTATTAATTAAAATAATTA+AGG | + | chr3.3:87358242-87358261 | MS.gene014877:intron | 5.0% |
| ACATGTCCGAGTCCATGCAA+TGG | + | chr3.3:87358730-87358749 | MS.gene014877:CDS | 50.0% | |
| AGACGAGCTGGAAAACTTCC+TGG | + | chr3.3:87360687-87360706 | MS.gene014877:CDS | 50.0% | |
| AGAGAATGAGAGGTCCCTCA+TGG | + | chr3.3:87360346-87360365 | MS.gene014877:CDS | 50.0% | |
| CAAAGGAGGAACATGGCTAC+AGG | + | chr3.3:87359787-87359806 | MS.gene014877:intron | 50.0% | |
| CATGGACTCGGACATGTTGT+TGG | - | chr3.3:87358727-87358746 | None:intergenic | 50.0% | |
| CGATGACTTCGCTGTGGTTT+CGG | - | chr3.3:87357612-87357631 | None:intergenic | 50.0% | |
| CTGCTTCCATTGCATGGACT+CGG | - | chr3.3:87358739-87358758 | None:intergenic | 50.0% | |
| GCAGTTTGGAAAGAGTGGTG+AGG | - | chr3.3:87357439-87357458 | None:intergenic | 50.0% | |
| GGAAGAGGATAAGGCAAGGT+TGG | + | chr3.3:87361253-87361272 | MS.gene014877:intron | 50.0% | |
| GTACTCTGCGTTAGGACAAC+AGG | + | chr3.3:87357855-87357874 | MS.gene014877:CDS | 50.0% | |
| GTTGCCAAGTACTCTGCGTT+AGG | + | chr3.3:87357847-87357866 | MS.gene014877:CDS | 50.0% | |
| TGAAACAGGTACGGTCCTCA+TGG | + | chr3.3:87360399-87360418 | MS.gene014877:intron | 50.0% | |
| TGAGCCAGTTAGGTGCAGTT+TGG | - | chr3.3:87357453-87357472 | None:intergenic | 50.0% | |
| ! | AGTACTGAGGTTGTGTCACC+AGG | - | chr3.3:87360708-87360727 | None:intergenic | 50.0% |
| ! | CTGCTGCCGCAGTATGTTTT+CGG | + | chr3.3:87358974-87358993 | MS.gene014877:intron | 50.0% |
| !! | AATGGTGGAGTGGGTTGTCT+TGG | - | chr3.3:87357381-87357400 | None:intergenic | 50.0% |
| !! | CAAGGTTGGTGCAAGAAACC+GGG | + | chr3.3:87361267-87361286 | MS.gene014877:CDS | 50.0% |
| !! | GCAAGGTTGGTGCAAGAAAC+CGG | + | chr3.3:87361266-87361285 | MS.gene014877:CDS | 50.0% |
| ACAGGAGTTTCACCAGGGGA+AGG | + | chr3.3:87360203-87360222 | MS.gene014877:intron | 55.0% | |
| AGAGCCATTGACCGGAGGAT+TGG | - | chr3.3:87357573-87357592 | None:intergenic | 55.0% | |
| ATCCTGGGCAACTGGTCAAC+CGG | - | chr3.3:87357796-87357815 | None:intergenic | 55.0% | |
| ATGCGACTGCGACATCAACG+AGG | - | chr3.3:87358669-87358688 | None:intergenic | 55.0% | |
| CGTTGAAGAGCAAGCGCAAG+AGG | + | chr3.3:87361369-87361388 | MS.gene014877:CDS | 55.0% | |
| GAAAGAGTGGTGAGGATCGG+AGG | - | chr3.3:87357431-87357450 | None:intergenic | 55.0% | |
| GAAGTCATCGACGACGTCAC+CGG | + | chr3.3:87357622-87357641 | MS.gene014877:CDS | 55.0% | |
| GAGCCATTGACCGGAGGATT+GGG | - | chr3.3:87357572-87357591 | None:intergenic | 55.0% | |
| GGTATGAAGGCCGAGGAAAG+CGG | + | chr3.3:87357649-87357668 | MS.gene014877:CDS | 55.0% | |
| GTGTTTGAGAATCGCCACGC+CGG | + | chr3.3:87357774-87357793 | MS.gene014877:CDS | 55.0% | |
| GTTCCCAATCCTCCGGTCAA+TGG | + | chr3.3:87357566-87357585 | MS.gene014877:CDS | 55.0% | |
| TCCTTGTCCTGTACACCCTC+CGG | + | chr3.3:87359200-87359219 | MS.gene014877:intron | 55.0% | |
| TGACTTCGCTGTGGTTTCGG+TGG | - | chr3.3:87357609-87357628 | None:intergenic | 55.0% | |
| TGTTGCCTCACCGCTTTCCT+CGG | - | chr3.3:87357662-87357681 | None:intergenic | 55.0% | |
| TTGACCGGAGGATTGGGAAC+CGG | - | chr3.3:87357566-87357585 | None:intergenic | 55.0% | |
| ! | GGTGTCGAGGTTGAGGAAGT+TGG | - | chr3.3:87357542-87357561 | None:intergenic | 55.0% |
| ! | GGTGTCGAGGTTGCGAAGAA+GGG | - | chr3.3:87357482-87357501 | None:intergenic | 55.0% |
| ! | GTTGTTGTTGGTTGTGGCGG+TGG | - | chr3.3:87357515-87357534 | None:intergenic | 55.0% |
| ! | GTTTCACCAGGGGAAGGTAC+AGG | + | chr3.3:87360209-87360228 | MS.gene014877:CDS | 55.0% |
| ! | TGGTGTCGAGGTTGCGAAGA+AGG | - | chr3.3:87357483-87357502 | None:intergenic | 55.0% |
| ! | TTAGTGACCGGAGGGTGTAC+AGG | - | chr3.3:87359210-87359229 | None:intergenic | 55.0% |
| !! | AGGGCGTTGTTGAGCCAGTT+AGG | - | chr3.3:87357463-87357482 | None:intergenic | 55.0% |
| AGGACGGGAGAGCCATTGAC+CGG | - | chr3.3:87357581-87357600 | None:intergenic | 60.0% | |
| CAGCGGAGGGAGTGATGAAC+TGG | + | chr3.3:87357680-87357699 | MS.gene014877:CDS | 60.0% | |
| CGTCGTCGATGACTTCGCTG+TGG | - | chr3.3:87357618-87357637 | None:intergenic | 60.0% | |
| CTCTCTCTCTGGACTCTGGG+TGG | + | chr3.3:87358035-87358054 | MS.gene014877:intron | 60.0% | |
| CTGTGGTTTCGGTGGAGGAC+AGG | - | chr3.3:87357601-87357620 | None:intergenic | 60.0% | |
| CTTCGCTGTGGTTTCGGTGG+AGG | - | chr3.3:87357606-87357625 | None:intergenic | 60.0% | |
| GAGTGGTGAGGATCGGAGGT+TGG | - | chr3.3:87357427-87357446 | None:intergenic | 60.0% | |
| GGAAAGCGGTGAGGCAACAG+CGG | + | chr3.3:87357663-87357682 | MS.gene014877:CDS | 60.0% | |
| GGTTTCGGTGGAGGACAGGA+CGG | - | chr3.3:87357597-87357616 | None:intergenic | 60.0% | |
| GTTGCTCCTGTACCTTCCCC+TGG | - | chr3.3:87360218-87360237 | None:intergenic | 60.0% | |
| GTTTCGGTGGAGGACAGGAC+GGG | - | chr3.3:87357596-87357615 | None:intergenic | 60.0% | |
| TTCCTCAACCTCGACACCGC+CGG | + | chr3.3:87357544-87357563 | MS.gene014877:CDS | 60.0% | |
| ! | ACCGGAGGGTGTACAGGACA+AGG | - | chr3.3:87359204-87359223 | None:intergenic | 60.0% |
| !! | TGGCGTTGACGTTGGTGTCG+AGG | - | chr3.3:87357495-87357514 | None:intergenic | 60.0% |
| AAGCGGTGAGGCAACAGCGG+AGG | + | chr3.3:87357666-87357685 | MS.gene014877:CDS | 65.0% | |
| ACCGGAGGATTGGGAACCGG+CGG | - | chr3.3:87357563-87357582 | None:intergenic | 65.0% | |
| ACGGGAGAGCCATTGACCGG+AGG | - | chr3.3:87357578-87357597 | None:intergenic | 65.0% | |
| AGCGGTGAGGCAACAGCGGA+GGG | + | chr3.3:87357667-87357686 | MS.gene014877:CDS | 65.0% | |
| CTCGGCCTTCATACCAGCGC+CGG | - | chr3.3:87357644-87357663 | None:intergenic | 65.0% | |
| GAAGGCCGAGGAAAGCGGTG+AGG | + | chr3.3:87357654-87357673 | MS.gene014877:CDS | 65.0% | |
| ! | AACCGGCGGTGTCGAGGTTG+AGG | - | chr3.3:87357549-87357568 | None:intergenic | 65.0% |
| ! | ATTGGGAACCGGCGGTGTCG+AGG | - | chr3.3:87357555-87357574 | None:intergenic | 65.0% |
| !! | ACCGCCGGTTCCCAATCCTC+CGG | + | chr3.3:87357559-87357578 | MS.gene014877:CDS | 65.0% |
| !! | CGTCACCGGCGCTGGTATGA+AGG | + | chr3.3:87357636-87357655 | MS.gene014877:CDS | 65.0% |
| !! | GAGCGTCGATCCTGGGCAAC+TGG | - | chr3.3:87357804-87357823 | None:intergenic | 65.0% |
| !! | GCCAGCTGAGCGTCGATCCT+GGG | - | chr3.3:87357811-87357830 | None:intergenic | 65.0% |
| !! | TGCCAGCTGAGCGTCGATCC+TGG | - | chr3.3:87357812-87357831 | None:intergenic | 65.0% |
| !! | TGTGGCGGTGGCGTTGACGT+TGG | - | chr3.3:87357503-87357522 | None:intergenic | 65.0% |
| ATCGACGACGTCACCGGCGC+TGG | + | chr3.3:87357628-87357647 | MS.gene014877:CDS | 70.0% | |
| GCCCAGGATCGACGCTCAGC+TGG | + | chr3.3:87357807-87357826 | MS.gene014877:CDS | 70.0% | |
| GGGCAACTGGTCAACCGGCG+TGG | - | chr3.3:87357791-87357810 | None:intergenic | 70.0% | |
| ! | CGCCGGTTGACCAGTTGCCC+AGG | + | chr3.3:87357791-87357810 | MS.gene014877:CDS | 70.0% |
| !! | CGGCGCTGGTATGAAGGCCG+AGG | + | chr3.3:87357642-87357661 | MS.gene014877:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 87357364 | 87361508 | 87357364 | ID=MS.gene014877 |
| chr3.3 | mRNA | 87357364 | 87361508 | 87357364 | ID=MS.gene014877.t1;Parent=MS.gene014877 |
| chr3.3 | exon | 87357364 | 87357921 | 87357364 | ID=MS.gene014877.t1.exon1;Parent=MS.gene014877.t1 |
| chr3.3 | CDS | 87357364 | 87357921 | 87357364 | ID=cds.MS.gene014877.t1;Parent=MS.gene014877.t1 |
| chr3.3 | exon | 87358683 | 87358803 | 87358683 | ID=MS.gene014877.t1.exon2;Parent=MS.gene014877.t1 |
| chr3.3 | CDS | 87358683 | 87358803 | 87358683 | ID=cds.MS.gene014877.t1;Parent=MS.gene014877.t1 |
| chr3.3 | exon | 87360207 | 87360406 | 87360207 | ID=MS.gene014877.t1.exon3;Parent=MS.gene014877.t1 |
| chr3.3 | CDS | 87360207 | 87360406 | 87360207 | ID=cds.MS.gene014877.t1;Parent=MS.gene014877.t1 |
| chr3.3 | exon | 87360639 | 87360770 | 87360639 | ID=MS.gene014877.t1.exon4;Parent=MS.gene014877.t1 |
| chr3.3 | CDS | 87360639 | 87360770 | 87360639 | ID=cds.MS.gene014877.t1;Parent=MS.gene014877.t1 |
| chr3.3 | exon | 87361254 | 87361508 | 87361254 | ID=MS.gene014877.t1.exon5;Parent=MS.gene014877.t1 |
| chr3.3 | CDS | 87361254 | 87361508 | 87361254 | ID=cds.MS.gene014877.t1;Parent=MS.gene014877.t1 |
| Gene Sequence |
| Protein sequence |
