AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016419

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016419.t1 MTR_8g042900 96.730 581 18 1 1 580 1 581 0.0 1165
MS.gene016419.t1 MTR_3g010780 71.945 581 155 4 1 580 1 574 0.0 839
MS.gene016419.t1 MTR_8g023150 48.744 597 271 14 1 580 4 582 6.75e-165 482
MS.gene016419.t1 MTR_4g087980 48.444 450 208 6 141 580 81 516 7.51e-146 431
MS.gene016419.t1 MTR_1g008140 41.397 587 303 15 23 580 33 607 1.19e-143 429
MS.gene016419.t1 MTR_7g112590 40.663 573 306 9 23 569 8 572 8.47e-143 426
MS.gene016419.t1 MTR_1g083510 40.765 601 297 14 17 578 1 581 6.16e-142 424
MS.gene016419.t1 MTR_3g091380 41.065 582 309 12 22 580 27 597 1.84e-140 420
MS.gene016419.t1 MTR_7g050950 44.078 515 271 9 73 580 49 553 5.70e-138 412
MS.gene016419.t1 MTR_2g044880 45.455 451 225 5 140 580 86 525 1.46e-137 410
MS.gene016419.t1 MTR_7g108905 42.967 519 266 9 76 576 46 552 7.41e-136 407
MS.gene016419.t1 MTR_7g112580 40.987 527 288 7 64 580 29 542 8.95e-136 406
MS.gene016419.t1 MTR_8g104655 45.315 523 248 11 79 580 36 541 1.66e-135 405
MS.gene016419.t1 MTR_8g023310 43.340 533 264 9 75 580 68 589 1.05e-134 405
MS.gene016419.t1 MTR_1g083470 38.220 573 316 11 26 576 10 566 1.35e-133 402
MS.gene016419.t1 MTR_1g083500 38.220 573 316 11 26 576 10 566 1.35e-133 402
MS.gene016419.t1 MTR_4g087970 44.196 448 224 7 146 580 83 517 2.47e-132 397
MS.gene016419.t1 MTR_8g104645 55.587 349 143 5 240 580 28 372 4.93e-132 390
MS.gene016419.t1 MTR_7g050870 43.520 517 272 11 73 580 49 554 8.73e-132 396
MS.gene016419.t1 MTR_4g124550 38.294 598 329 14 3 573 2 586 1.25e-131 397
MS.gene016419.t1 MTR_4g025690 45.738 481 225 12 107 580 62 513 2.06e-131 394
MS.gene016419.t1 MTR_1g054880 46.368 468 219 11 143 580 93 558 2.25e-130 393
MS.gene016419.t1 MTR_1g083490 38.153 574 320 12 26 576 10 571 3.20e-130 394
MS.gene016419.t1 MTR_4g025730 45.614 513 244 17 73 580 27 509 2.37e-129 389
MS.gene016419.t1 MTR_4g005170 38.070 570 324 12 27 576 11 571 8.29e-129 391
MS.gene016419.t1 MTR_1g088020 45.570 474 224 11 139 580 84 555 4.38e-127 384
MS.gene016419.t1 MTR_8g042910 42.086 537 274 9 79 580 78 612 2.78e-126 384
MS.gene016419.t1 MTR_4g025670 43.416 486 234 11 112 580 28 489 4.87e-125 377
MS.gene016419.t1 MTR_3g010770 40.734 545 276 7 77 580 37 575 7.27e-125 379
MS.gene016419.t1 MTR_2g044810 40.196 510 281 8 73 576 39 530 2.08e-124 377
MS.gene016419.t1 MTR_1g083520 41.746 527 270 10 70 580 23 528 6.86e-124 375
MS.gene016419.t1 MTR_7g050980 44.295 447 232 8 142 580 118 555 1.22e-123 375
MS.gene016419.t1 MTR_1g088225 45.359 474 223 12 139 580 84 553 1.37e-123 375
MS.gene016419.t1 MTR_4g005180 37.234 564 319 12 36 576 2 553 1.93e-123 375
MS.gene016419.t1 MTR_1g086190 38.086 533 302 10 63 576 36 559 2.12e-123 375
MS.gene016419.t1 MTR_4g124520 41.929 508 249 10 73 569 38 510 4.73e-123 373
MS.gene016419.t1 MTR_7g108875 43.496 492 240 11 126 580 74 564 2.66e-122 372
MS.gene016419.t1 MTR_1g086210 38.869 548 291 13 64 576 27 565 7.28e-122 371
MS.gene016419.t1 MTR_7g053360 40.918 523 271 12 72 580 29 527 3.93e-119 363
MS.gene016419.t1 MTR_7g108900 39.518 539 279 10 76 580 35 560 3.51e-118 362
MS.gene016419.t1 MTR_7g108890 43.671 474 232 10 139 580 92 562 5.63e-118 361
MS.gene016419.t1 MTR_3g008700 44.898 441 219 9 149 580 102 527 2.58e-117 358
MS.gene016419.t1 MTR_3g008720 44.898 441 219 9 149 580 102 527 4.98e-117 357
MS.gene016419.t1 MTR_3g008640 44.898 441 219 9 149 580 102 527 5.14e-117 357
MS.gene016419.t1 MTR_3g033690 40.347 518 280 10 72 580 29 526 1.29e-116 356
MS.gene016419.t1 MTR_2g436040 36.057 563 314 11 26 576 14 542 2.17e-116 358
MS.gene016419.t1 MTR_4g120280 36.788 579 317 11 24 576 13 568 2.77e-116 357
MS.gene016419.t1 MTR_4g120290 36.237 574 327 11 24 576 13 568 3.24e-114 352
MS.gene016419.t1 MTR_7g110440 37.912 546 304 12 62 580 29 566 1.68e-110 342
MS.gene016419.t1 MTR_4g035980 42.451 457 233 10 139 580 98 539 2.92e-110 340
MS.gene016419.t1 MTR_7g110490 36.145 581 326 13 27 580 4 566 3.14e-107 334
MS.gene016419.t1 MTR_7g110510 36.145 581 326 13 27 580 4 566 3.14e-107 334
MS.gene016419.t1 MTR_2g436050 36.077 571 321 12 26 576 14 560 5.26e-107 333
MS.gene016419.t1 MTR_0458s0030 57.692 260 106 1 325 580 55 314 7.91e-106 321
MS.gene016419.t1 MTR_1g088040 57.692 260 106 1 325 580 55 314 7.91e-106 321
MS.gene016419.t1 MTR_8g104580 40.344 523 241 13 79 580 28 500 2.04e-105 327
MS.gene016419.t1 MTR_7g110560 35.211 568 325 12 26 576 4 545 3.18e-104 325
MS.gene016419.t1 MTR_2g044660 48.197 305 156 2 270 573 322 625 7.81e-97 308
MS.gene016419.t1 MTR_0618s0020 58.150 227 90 2 359 580 2 228 2.96e-92 283
MS.gene016419.t1 MTR_7g110420 38.866 476 255 12 141 580 103 578 6.94e-92 294
MS.gene016419.t1 MTR_5g083620 42.000 350 191 8 239 580 11 356 3.99e-89 280
MS.gene016419.t1 MTR_2g044810 50.407 246 118 1 335 576 216 461 7.18e-89 283
MS.gene016419.t1 MTR_8g093460 34.483 522 301 15 73 572 41 543 1.89e-88 284
MS.gene016419.t1 MTR_7g110430 36.638 464 238 9 140 580 102 532 2.19e-86 278
MS.gene016419.t1 MTR_8g088610 41.441 333 181 7 252 576 46 372 1.26e-85 271
MS.gene016419.t1 MTR_3g095920 32.049 571 331 19 27 569 12 553 2.04e-80 263
MS.gene016419.t1 MTR_7g107180 40.705 312 168 7 275 580 7 307 6.99e-70 228
MS.gene016419.t1 MTR_0458s0010 34.167 480 233 14 139 580 84 518 2.64e-68 230
MS.gene016419.t1 MTR_2g105560 35.799 338 193 8 254 580 15 339 1.52e-63 212
MS.gene016419.t1 MTR_7g111560 31.014 503 301 13 104 578 70 554 9.62e-63 216
MS.gene016419.t1 MTR_2g039530 39.252 321 152 9 242 545 22 316 8.38e-56 192
MS.gene016419.t1 MTR_6g088810 36.577 298 168 6 283 569 90 377 1.05e-50 179
MS.gene016419.t1 MTR_5g083590 33.333 309 152 5 273 576 5 264 2.22e-50 175
MS.gene016419.t1 MTR_7g102600 31.722 331 203 7 253 569 72 393 2.53e-50 179
MS.gene016419.t1 MTR_6g012800 33.444 302 182 5 275 566 6 298 1.06e-49 174
MS.gene016419.t1 MTR_7g092780 34.098 305 184 6 275 569 90 387 1.52e-49 176
MS.gene016419.t1 MTR_6g024165 33.945 327 180 11 259 569 28 334 3.51e-49 174
MS.gene016419.t1 MTR_8g102380 35.667 300 170 5 283 569 88 377 7.57e-49 174
MS.gene016419.t1 MTR_6g042660 34.672 274 160 7 275 543 37 296 7.88e-48 170
MS.gene016419.t1 MTR_1g033050 32.704 318 196 5 259 569 2 308 2.59e-47 168
MS.gene016419.t1 MTR_1g086540 31.761 318 193 7 266 569 37 344 2.49e-45 164
MS.gene016419.t1 MTR_7g011530 31.544 298 185 5 277 564 8 296 5.63e-44 159
MS.gene016419.t1 MTR_5g095490 33.775 302 176 7 281 569 67 357 1.65e-43 159
MS.gene016419.t1 MTR_6g042690 34.409 279 159 8 275 543 39 303 4.89e-41 152
MS.gene016419.t1 MTR_5g012600 31.090 312 193 6 275 574 63 364 1.08e-39 149
MS.gene016419.t1 MTR_8g102380 37.500 248 133 5 283 517 88 326 4.57e-39 146
MS.gene016419.t1 MTR_5g093970 31.438 299 189 6 275 569 43 329 8.39e-39 145
MS.gene016419.t1 MTR_4g124740 29.878 328 193 13 257 569 34 339 1.98e-37 142
MS.gene016419.t1 MTR_5g088290 30.743 296 189 5 275 569 48 328 8.31e-37 140
MS.gene016419.t1 MTR_5g088280 29.831 295 192 5 275 569 39 318 1.01e-36 139
MS.gene016419.t1 MTR_2g033970 30.000 320 197 8 262 571 46 348 3.12e-36 139
MS.gene016419.t1 MTR_5g088300 30.169 295 191 4 275 569 37 316 2.65e-35 135
MS.gene016419.t1 MTR_8g036225 28.618 304 194 6 275 569 33 322 4.11e-33 129
MS.gene016419.t1 MTR_2g436070 30.000 330 200 10 26 346 14 321 9.41e-33 129
MS.gene016419.t1 MTR_2g073390 29.276 304 193 8 275 569 71 361 3.94e-32 127
MS.gene016419.t1 MTR_4g074290 28.808 302 197 7 275 569 71 361 9.10e-32 127
MS.gene016419.t1 MTR_4g051810 28.808 302 187 6 275 569 37 317 6.74e-31 123
MS.gene016419.t1 MTR_2g436600 27.414 321 195 11 262 571 45 338 6.81e-28 115
MS.gene016419.t1 MTR_0009s0350 27.152 302 202 7 275 569 71 361 1.09e-27 115
MS.gene016419.t1 MTR_0009s0340 27.152 302 202 7 275 569 71 361 1.09e-27 115
MS.gene016419.t1 MTR_6g025590 34.270 178 106 5 259 428 36 210 1.18e-22 97.4
MS.gene016419.t1 MTR_0408s0030 40.860 93 50 2 451 543 36 123 2.96e-17 79.7
MS.gene016419.t1 MTR_7g102580 38.462 130 55 5 318 428 29 152 2.02e-16 77.0
MS.gene016419.t1 MTR_4g130790 28.837 215 131 6 305 512 55 254 1.99e-15 77.0
MS.gene016419.t1 MTR_8g104765 28.774 212 131 5 29 227 3 207 5.42e-15 74.7
MS.gene016419.t1 MTR_4g120830 28.302 212 123 5 29 227 3 198 9.49e-15 73.9
MS.gene016419.t1 MTR_0036s0140 27.953 254 137 9 4 243 7 228 1.16e-14 73.9
MS.gene016419.t1 MTR_7g108790 33.149 181 98 7 60 236 29 190 5.45e-14 71.2
MS.gene016419.t1 MTR_4g120825 27.830 212 124 5 29 227 3 198 8.55e-14 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016419.t1 AT3G10710 56.944 576 227 9 7 580 5 561 0.0 663
MS.gene016419.t1 AT5G04960 56.432 583 225 9 6 580 3 564 0.0 643
MS.gene016419.t1 AT1G53840 46.543 593 281 14 1 573 4 580 3.69e-162 475
MS.gene016419.t1 AT3G05610 39.020 592 316 12 6 580 2 565 4.33e-144 432
MS.gene016419.t1 AT5G27870 39.761 586 309 11 6 576 2 558 2.48e-143 432
MS.gene016419.t1 AT5G53370 41.809 586 306 14 12 580 18 585 6.68e-143 426
MS.gene016419.t1 AT3G14300 47.217 521 236 13 72 570 456 959 8.65e-143 437
MS.gene016419.t1 AT3G14300 34.252 254 147 6 5 246 9 254 3.08e-28 120
MS.gene016419.t1 AT3G14300 36.257 171 87 6 72 227 268 431 1.44e-14 77.8
MS.gene016419.t1 AT5G53370 41.809 586 306 14 12 580 54 621 2.73e-142 426
MS.gene016419.t1 AT3G43270 46.799 453 226 7 141 580 75 525 3.27e-138 412
MS.gene016419.t1 AT5G49180 43.762 521 265 10 69 570 49 560 1.16e-137 412
MS.gene016419.t1 AT3G05620 45.140 463 223 5 135 580 93 541 1.30e-137 411
MS.gene016419.t1 AT1G11580 42.883 548 287 11 43 580 26 557 8.17e-135 404
MS.gene016419.t1 AT1G11580 42.883 548 287 11 43 580 47 578 2.00e-134 404
MS.gene016419.t1 AT3G49220 40.592 574 310 14 22 580 39 596 2.94e-133 402
MS.gene016419.t1 AT4G33220 42.147 503 255 8 104 580 31 523 4.57e-133 399
MS.gene016419.t1 AT1G53830 42.058 554 277 12 61 580 44 587 1.41e-132 399
MS.gene016419.t1 AT3G49220 40.630 571 314 12 22 580 84 641 2.06e-132 401
MS.gene016419.t1 AT2G26450 37.997 629 320 15 3 580 2 611 2.83e-132 400
MS.gene016419.t1 AT3G14310 41.208 563 267 13 66 580 46 592 7.80e-132 398
MS.gene016419.t1 AT4G33230 39.677 620 317 16 3 580 2 606 6.82e-130 393
MS.gene016419.t1 AT4G02330 42.105 551 270 14 72 580 28 571 1.13e-129 392
MS.gene016419.t1 AT1G23200 47.425 466 202 11 138 573 95 547 3.18e-128 387
MS.gene016419.t1 AT4G33220 52.083 336 149 4 252 580 72 402 5.10e-125 374
MS.gene016419.t1 AT1G02810 39.787 563 280 12 69 580 23 577 8.90e-124 377
MS.gene016419.t1 AT2G47550 44.731 465 228 9 143 580 96 558 9.33e-124 376
MS.gene016419.t1 AT3G06830 38.547 537 304 9 63 580 39 568 1.60e-123 375
MS.gene016419.t1 AT2G26440 40.971 515 273 9 73 569 35 536 1.15e-122 373
MS.gene016419.t1 AT2G45220 44.250 513 248 15 75 580 30 511 3.67e-121 367
MS.gene016419.t1 AT5G51490 40.812 517 273 12 79 580 38 536 4.95e-119 363
MS.gene016419.t1 AT4G03930 42.348 477 250 9 112 580 65 524 1.38e-116 356
MS.gene016419.t1 AT2G43050 42.198 455 235 7 135 580 81 516 1.59e-116 356
MS.gene016419.t1 AT5G51500 40.769 520 283 13 72 580 35 540 1.65e-115 354
MS.gene016419.t1 AT1G11590 43.084 441 234 7 144 580 97 524 1.46e-113 348
MS.gene016419.t1 AT3G60730 41.480 446 228 8 156 580 86 519 1.61e-113 348
MS.gene016419.t1 AT3G27980 45.074 406 203 7 181 580 106 497 1.04e-112 345
MS.gene016419.t1 AT3G59010 42.437 476 245 12 120 580 67 528 2.96e-112 345
MS.gene016419.t1 AT3G10720 40.685 467 245 7 146 580 149 615 5.62e-112 347
MS.gene016419.t1 AT4G02320 38.854 471 251 7 132 580 63 518 8.53e-110 338
MS.gene016419.t1 AT5G04970 40.043 467 248 7 146 580 154 620 1.21e-109 342
MS.gene016419.t1 AT3G47400 37.925 530 302 9 67 580 76 594 2.55e-108 337
MS.gene016419.t1 AT4G02300 40.044 452 250 8 138 576 85 528 3.33e-106 330
MS.gene016419.t1 AT4G00190 38.189 508 269 11 78 580 7 474 4.28e-103 320
MS.gene016419.t1 AT5G20860 38.063 444 247 9 149 580 111 538 2.46e-101 317
MS.gene016419.t1 AT3G62170 34.075 584 328 12 30 569 7 577 1.46e-97 309
MS.gene016419.t1 AT3G10720 52.896 259 118 1 326 580 1 259 4.81e-96 294
MS.gene016419.t1 AT4G15980 46.108 334 174 3 245 572 361 694 1.16e-94 305
MS.gene016419.t1 AT4G15980 32.121 165 98 6 73 232 46 201 5.21e-15 79.0
MS.gene016419.t1 AT4G15980 46.108 334 174 3 245 572 371 704 2.13e-94 304
MS.gene016419.t1 AT4G15980 32.121 165 98 6 73 232 56 211 5.41e-15 79.0
MS.gene016419.t1 AT2G47040 33.721 602 316 14 29 569 5 584 2.39e-94 301
MS.gene016419.t1 AT2G47030 33.277 595 321 13 29 569 5 577 7.60e-93 296
MS.gene016419.t1 AT5G09760 36.295 529 293 15 66 568 36 546 1.66e-88 284
MS.gene016419.t1 AT5G09760 35.917 529 295 14 66 568 62 572 6.06e-88 283
MS.gene016419.t1 AT1G11370 49.603 252 123 1 266 513 37 288 1.10e-85 268
MS.gene016419.t1 AT5G20860 35.349 430 222 8 149 566 111 496 1.79e-82 267
MS.gene016419.t1 AT5G64640 33.088 544 323 13 51 568 69 597 2.05e-82 270
MS.gene016419.t1 AT1G05310 33.013 312 192 5 268 569 84 388 3.98e-53 186
MS.gene016419.t1 AT2G36710 34.528 307 185 5 272 569 86 385 1.74e-49 177
MS.gene016419.t1 AT5G19730 34.754 305 178 6 276 569 87 381 3.11e-48 172
MS.gene016419.t1 AT1G44980 44.974 189 103 1 252 439 54 242 4.32e-46 162
MS.gene016419.t1 AT3G29090 31.683 303 188 4 275 567 7 300 3.32e-44 160
MS.gene016419.t1 AT5G55590 34.528 307 179 7 275 569 82 378 4.07e-43 159
MS.gene016419.t1 AT2G21610 29.967 307 198 6 275 579 51 342 1.45e-42 156
MS.gene016419.t1 AT2G36700 31.667 300 188 5 277 569 44 333 2.42e-42 155
MS.gene016419.t1 AT2G21610 29.967 307 198 6 275 579 56 347 2.45e-42 156
MS.gene016419.t1 AT5G47500 28.134 359 232 7 223 569 13 357 1.35e-40 151
MS.gene016419.t1 AT5G18990 30.968 310 192 6 271 569 25 323 1.94e-40 150
MS.gene016419.t1 AT2G19150 31.908 304 186 6 275 569 41 332 2.29e-40 150
MS.gene016419.t1 AT3G24130 30.968 310 190 7 272 569 31 328 2.38e-40 150
MS.gene016419.t1 AT3G17060 28.289 304 198 6 275 570 46 337 3.66e-39 147
MS.gene016419.t1 AT5G55590 36.111 252 141 6 275 514 82 325 4.26e-38 144
MS.gene016419.t1 AT3G49220 31.412 347 212 12 22 358 84 414 2.37e-37 144
MS.gene016419.t1 AT5G26810 28.308 325 206 6 261 569 20 333 3.95e-35 135
MS.gene016419.t1 AT5G07420 26.648 364 237 8 223 569 5 355 1.94e-34 134
MS.gene016419.t1 AT2G19150 32.932 249 148 5 275 514 41 279 7.03e-34 130
MS.gene016419.t1 AT5G07430 25.753 365 239 8 223 569 5 355 1.10e-33 132
MS.gene016419.t1 AT2G47280 28.571 308 192 7 275 569 35 327 1.21e-31 125
MS.gene016419.t1 AT5G61680 27.632 304 197 7 275 569 69 358 7.77e-31 124
MS.gene016419.t1 AT1G69940 26.263 297 196 7 282 569 73 355 7.68e-29 118
MS.gene016419.t1 AT5G07410 26.263 297 196 7 282 569 73 355 2.52e-28 117
MS.gene016419.t1 AT4G25260 31.122 196 115 6 41 227 10 194 1.31e-13 70.5
MS.gene016419.t1 AT1G62760 30.061 163 95 5 75 227 148 301 9.13e-12 67.0
MS.gene016419.t1 AT2G01610 29.775 178 106 6 75 234 45 221 2.72e-11 63.9
MS.gene016419.t1 AT3G62820 29.208 202 119 6 40 235 8 191 5.95e-11 62.4

Find 102 sgRNAs with CRISPR-Local

Find 137 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAACCATGTCTTCCTTTA+AGG 0.044203 8.2:-58157332 None:intergenic
TAAGGACTTGAACTTGAATT+TGG 0.167092 8.2:-58156930 MS.gene016419:CDS
AATTGCAATGTTTCGCCTTT+TGG 0.189029 8.2:-58155466 MS.gene016419:CDS
GACTTTACCATAGGCCTTAA+AGG 0.212569 8.2:+58157318 None:intergenic
TTGAATAGCTCTTTGTCTTA+TGG 0.218218 8.2:-58156845 MS.gene016419:CDS
ATGAATGTTACTATTGTTTC+TGG 0.218323 8.2:-58156225 MS.gene016419:CDS
GATCAATTGTAAGGATCTTT+TGG 0.225160 8.2:-58156885 MS.gene016419:CDS
AGTTCTGTTAAAACATATTT+AGG 0.227942 8.2:-58155436 MS.gene016419:CDS
GAAATTCCTGTGTTCATGTT+AGG 0.237771 8.2:+58155496 None:intergenic
ATCTCTTTCAAGTTCAATTA+AGG 0.244852 8.2:-58157119 MS.gene016419:CDS
GGATTTATTATGAAAATGTT+AGG 0.293225 8.2:-58156290 MS.gene016419:CDS
GAAACTTGGTTGAGTGCTTC+AGG 0.293398 8.2:-58156785 MS.gene016419:intron
CCACTTGACCCTATTCTTCA+TGG 0.298592 8.2:+58155264 None:intergenic
TTAGGGTGGAAAAGACTAAA+TGG 0.331655 8.2:-58156272 MS.gene016419:CDS
CCTTAGTCCTCTTGTTCAAC+CGG 0.337493 8.2:-58157053 MS.gene016419:CDS
AAATGGAATGTCATGATAAT+TGG 0.339952 8.2:-58156255 MS.gene016419:CDS
GTTTAATATTCAGCTGTGTT+TGG 0.340708 8.2:-58155817 MS.gene016419:intron
TGTTGCATTCGCGGTAGAAT+TGG 0.341900 8.2:+58155641 None:intergenic
TACCAGCAAACATGCATTGA+TGG 0.346136 8.2:-58156651 MS.gene016419:CDS
TTCGAACTTCGAACATGGCT+TGG 0.346240 8.2:+58157284 None:intergenic
GATAGATGGATCCCTGCTTC+TGG 0.358027 8.2:-58155175 MS.gene016419:CDS
AGCTCATAAGTTTACAGTTA+AGG 0.369384 8.2:-58155212 MS.gene016419:CDS
GTTACCTTGGGTTGGAGATT+CGG 0.370568 8.2:-58155338 MS.gene016419:CDS
TTTAATATTCAGCTGTGTTT+GGG 0.376483 8.2:-58155816 MS.gene016419:intron
GTTATTGTGTTCTGCTGTCC+TGG 0.383824 8.2:+58155538 None:intergenic
AACCATCAATGCATGTTTGC+TGG 0.390697 8.2:+58156649 None:intergenic
TCTTTATGATGAAGCCAGTT+TGG 0.390868 8.2:+58156465 None:intergenic
GGAAGCTTTGATCAATTGTA+AGG 0.395095 8.2:-58156894 MS.gene016419:CDS
TCGAACTTCGAACATGGCTT+GGG 0.401179 8.2:+58157285 None:intergenic
AAATTCCTGTGTTCATGTTA+GGG 0.418660 8.2:+58155497 None:intergenic
ATGTCTTCCTTTAAGGCCTA+TGG 0.419251 8.2:-58157325 MS.gene016419:CDS
AGTGTTTATGCAATCAAACT+TGG 0.419755 8.2:-58155386 MS.gene016419:CDS
GCTTAACAAGGCTGCATCTT+CGG 0.420371 8.2:-58156532 MS.gene016419:CDS
TTCCGTAGATGTTGCATTCG+CGG 0.433043 8.2:+58155632 None:intergenic
ATCAAAATGAAGAACCAAAC+TGG 0.433147 8.2:-58156479 MS.gene016419:CDS
TATGCTGAATTTCAGAATGT+TGG 0.433530 8.2:-58155298 MS.gene016419:CDS
TTAAATGTTGCACCAGAAGC+AGG 0.437960 8.2:+58155163 None:intergenic
GTGGTGCTTCCATGAAGAAT+AGG 0.438477 8.2:-58155273 MS.gene016419:CDS
ACCCAAGGTAACCATCCATT+TGG 0.439713 8.2:+58155349 None:intergenic
CGACAATTTGAACAACTTCT+CGG 0.444151 8.2:+58157015 None:intergenic
TTGTCCACAATTGTCCTCAT+TGG 0.452200 8.2:-58157229 MS.gene016419:CDS
GTGTTCTGCTGTCCTGGCAT+AGG 0.453171 8.2:+58155544 None:intergenic
ACCGTGATCTATGTGAAGAA+AGG 0.456188 8.2:-58156312 MS.gene016419:CDS
TCCAAATGGATGGTTACCTT+GGG 0.459205 8.2:-58155350 MS.gene016419:CDS
GTCCAAATGGATGGTTACCT+TGG 0.461469 8.2:-58155351 MS.gene016419:CDS
AAGCACTCAACCAAGTTTCA+AGG 0.464276 8.2:+58156789 None:intergenic
AATTTCATTGCAAGAGACAT+AGG 0.466408 8.2:-58155790 MS.gene016419:CDS
TCAGCATAAAATATAGTATC+CGG 0.473076 8.2:+58155313 None:intergenic
ACAGAACTCAAGTTTCCAAA+AGG 0.483952 8.2:+58155451 None:intergenic
TGGTGCTTCCATGAAGAATA+GGG 0.495686 8.2:-58155272 MS.gene016419:CDS
TTGTCGCGAAAGACGGGAGT+GGG 0.497689 8.2:-58156392 MS.gene016419:CDS
GATTTATTATGAAAATGTTA+GGG 0.500256 8.2:-58156289 MS.gene016419:CDS
AAACATATTTAGGTAGACCT+TGG 0.501761 8.2:-58155426 MS.gene016419:CDS
CCGTGATCTATGTGAAGAAA+GGG 0.502068 8.2:-58156311 MS.gene016419:CDS
GACAATTTGAACAACTTCTC+GGG 0.504618 8.2:+58157016 None:intergenic
TCCCTAATAAAAGTGACAAA+AGG 0.508215 8.2:-58156335 MS.gene016419:CDS
GTTGTTGAGTAATTCTTCCA+AGG 0.510500 8.2:+58155409 None:intergenic
CAGAACACAATAACAGCACA+AGG 0.511799 8.2:-58155529 MS.gene016419:CDS
TGTCCTGGCATAGGTTGTCT+TGG 0.512818 8.2:+58155553 None:intergenic
ACATTGTTGTCGCGAAAGAC+GGG 0.518230 8.2:-58156398 MS.gene016419:CDS
AATGGATGGTTACCTTGGGT+TGG 0.521909 8.2:-58155346 MS.gene016419:CDS
GACATTGTTGTCGCGAAAGA+CGG 0.522332 8.2:-58156399 MS.gene016419:CDS
AATAGCTCTTTGTCTTATGG+AGG 0.533210 8.2:-58156842 MS.gene016419:CDS
TGCTGACCCGGTTGAACAAG+AGG 0.534157 8.2:+58157046 None:intergenic
TTTCCTTCGAACTTCGAACA+TGG 0.534768 8.2:+58157279 None:intergenic
GAAGAATAGGGTCAAGTGGA+AGG 0.538939 8.2:-58155260 MS.gene016419:CDS
GTTCAAATTGTCGATTCAAG+TGG 0.542567 8.2:-58157005 MS.gene016419:CDS
TTGTCATTAGTGCTACTGCT+TGG 0.546362 8.2:+58155737 None:intergenic
TTATTATGAAAATGTTAGGG+TGG 0.548237 8.2:-58156286 MS.gene016419:CDS
CTTGTTAAGCCATGTGATGA+TGG 0.554658 8.2:+58156545 None:intergenic
AATGTTGCTGTTGAAAATGT+TGG 0.554684 8.2:+58156177 None:intergenic
ACGAGCATTGTTGTGAGCAA+CGG 0.555809 8.2:+58157180 None:intergenic
TCAAGTCCTTAAAAGTTCCA+TGG 0.556946 8.2:+58156942 None:intergenic
TCGGGTCGTATTTGCTGACC+CGG 0.558528 8.2:+58157034 None:intergenic
GCTGAATTTCAGAATGTTGG+AGG 0.560795 8.2:-58155295 MS.gene016419:CDS
CTTAGTCCTCTTGTTCAACC+GGG 0.562802 8.2:-58157052 MS.gene016419:CDS
CCCTTTCTTCACATAGATCA+CGG 0.563259 8.2:+58156311 None:intergenic
GTCTTTCGCGACAACAATGT+CGG 0.565235 8.2:+58156401 None:intergenic
GTTGTCGCGAAAGACGGGAG+TGG 0.565313 8.2:-58156393 MS.gene016419:CDS
TTGTGATGTTACATTGTACA+AGG 0.567974 8.2:-58157092 MS.gene016419:CDS
TGATTCGTCGACTTTACCAT+AGG 0.568245 8.2:+58157309 None:intergenic
CATCATCACATGGCTTAACA+AGG 0.570892 8.2:-58156544 MS.gene016419:CDS
TTACCAAGACAACCTATGCC+AGG 0.573972 8.2:-58155556 MS.gene016419:CDS
ATAGGCTTTAAGAACACAGC+TGG 0.577241 8.2:-58155772 MS.gene016419:CDS
CCGGTTGAACAAGAGGACTA+AGG 0.579986 8.2:+58157053 None:intergenic
GATACCAATGAGGACAATTG+TGG 0.590032 8.2:+58157225 None:intergenic
TACCGCGAATGCAACATCTA+CGG 0.593477 8.2:-58155634 MS.gene016419:CDS
GTTCAGTATTTATCTGACCA+TGG 0.597410 8.2:-58156959 MS.gene016419:CDS
TAAATGTTGCACCAGAAGCA+GGG 0.599444 8.2:+58155164 None:intergenic
GTGTTTATGCAATCAAACTT+GGG 0.601304 8.2:-58155385 MS.gene016419:CDS
ATAGCTCTTTGTCTTATGGA+GGG 0.602541 8.2:-58156841 MS.gene016419:CDS
CCATGAAGAATAGGGTCAAG+TGG 0.608609 8.2:-58155264 MS.gene016419:CDS
AATGTCATGATAATTGGTGA+TGG 0.609478 8.2:-58156249 MS.gene016419:CDS
AAGAATAGGGTCAAGTGGAA+GGG 0.609533 8.2:-58155259 MS.gene016419:CDS
AAGCCATGTTCGAAGTTCGA+AGG 0.613588 8.2:-58157282 MS.gene016419:CDS
GAATTTCAGAATGTTGGAGG+TGG 0.614077 8.2:-58155292 MS.gene016419:CDS
ACAGTCTTGCCATCATCACA+TGG 0.638538 8.2:-58156554 MS.gene016419:CDS
TTGGGTTGGAGATTCGGCGC+CGG 0.641411 8.2:-58155332 MS.gene016419:CDS
GAATTTGGATAATAGAACAA+AGG 0.642422 8.2:-58156915 MS.gene016419:CDS
ATAGGCCTTAAAGGAAGACA+TGG 0.648840 8.2:+58157327 None:intergenic
AATGACCCTAACATGAACAC+AGG 0.657498 8.2:-58155502 MS.gene016419:CDS
GGCGCCGAATCTCCAACCCA+AGG 0.664024 8.2:+58155334 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAACAATAAATTAATA+TGG + chr8.2:58156632-58156651 None:intergenic 10.0%
!! ATTACTTAATTTCAATTTAA+AGG + chr8.2:58156340-58156359 None:intergenic 10.0%
!! GATTTATTATGAAAATGTTA+GGG - chr8.2:58156186-58156205 MS.gene016419:CDS 15.0%
!!! AATTTATTGTTTCTTTTCTA+TGG - chr8.2:58156636-58156655 MS.gene016419:CDS 15.0%
!!! TTTTATGATTATTTCTTTGT+TGG + chr8.2:58156577-58156596 None:intergenic 15.0%
!! AGTTCTGTTAAAACATATTT+AGG - chr8.2:58157039-58157058 MS.gene016419:CDS 20.0%
!! GGATTTATTATGAAAATGTT+AGG - chr8.2:58156185-58156204 MS.gene016419:CDS 20.0%
! AAATGGAATGTCATGATAAT+TGG - chr8.2:58156220-58156239 MS.gene016419:CDS 25.0%
! ATGAATGTTACTATTGTTTC+TGG - chr8.2:58156250-58156269 MS.gene016419:CDS 25.0%
! GAATTTGGATAATAGAACAA+AGG - chr8.2:58155560-58155579 MS.gene016419:CDS 25.0%
! TCAGCATAAAATATAGTATC+CGG + chr8.2:58157165-58157184 None:intergenic 25.0%
! TTATTATGAAAATGTTAGGG+TGG - chr8.2:58156189-58156208 MS.gene016419:CDS 25.0%
! TTTAATATTCAGCTGTGTTT+GGG - chr8.2:58156659-58156678 MS.gene016419:CDS 25.0%
!! ATCAATTGTAAGGATCTTTT+GGG - chr8.2:58155591-58155610 MS.gene016419:CDS 25.0%
!! ATTTTATTAGTCCAAATGGA+TGG - chr8.2:58157115-58157134 MS.gene016419:CDS 25.0%
!! GGAAGTCTTAATTTTATAGA+TGG - chr8.2:58156271-58156290 MS.gene016419:CDS 25.0%
!!! ATCTCTTTCAAGTTCAATTA+AGG - chr8.2:58155356-58155375 MS.gene016419:CDS 25.0%
!!! TCCTTTTGTCACTTTTATTA+GGG + chr8.2:58156144-58156163 None:intergenic 25.0%
AAACATATTTAGGTAGACCT+TGG - chr8.2:58157049-58157068 MS.gene016419:CDS 30.0%
AAATTCCTGTGTTCATGTTA+GGG + chr8.2:58156981-58157000 None:intergenic 30.0%
AATGTCATGATAATTGGTGA+TGG - chr8.2:58156226-58156245 MS.gene016419:CDS 30.0%
AATTTCATTGCAAGAGACAT+AGG - chr8.2:58156685-58156704 MS.gene016419:intron 30.0%
AGCTCATAAGTTTACAGTTA+AGG - chr8.2:58157263-58157282 MS.gene016419:CDS 30.0%
AGTGTTTATGCAATCAAACT+TGG - chr8.2:58157089-58157108 MS.gene016419:CDS 30.0%
ATCAAAATGAAGAACCAAAC+TGG - chr8.2:58155996-58156015 MS.gene016419:intron 30.0%
GCATTGTTTATTCATCTAAC+AGG - chr8.2:58155797-58155816 MS.gene016419:CDS 30.0%
GTATAAATTAACTTATGCCG+AGG + chr8.2:58155767-58155786 None:intergenic 30.0%
GTGTTTATGCAATCAAACTT+GGG - chr8.2:58157090-58157109 MS.gene016419:CDS 30.0%
GTTTAATATTCAGCTGTGTT+TGG - chr8.2:58156658-58156677 MS.gene016419:CDS 30.0%
TAAGGACTTGAACTTGAATT+TGG - chr8.2:58155545-58155564 MS.gene016419:CDS 30.0%
TATGCTGAATTTCAGAATGT+TGG - chr8.2:58157177-58157196 MS.gene016419:CDS 30.0%
TCCCTAATAAAAGTGACAAA+AGG - chr8.2:58156140-58156159 MS.gene016419:intron 30.0%
TTGAATAGCTCTTTGTCTTA+TGG - chr8.2:58155630-58155649 MS.gene016419:CDS 30.0%
TTGTGATGTTACATTGTACA+AGG - chr8.2:58155383-58155402 MS.gene016419:CDS 30.0%
! AATGTTGCTGTTGAAAATGT+TGG + chr8.2:58156301-58156320 None:intergenic 30.0%
! ACAGTTAAGGCTTTTCTTAA+TGG - chr8.2:58157276-58157295 MS.gene016419:CDS 30.0%
! ACATTTTCAACAGCAACATT+TGG - chr8.2:58156301-58156320 MS.gene016419:CDS 30.0%
! AGCTATAAATTTTGTGCATC+TGG + chr8.2:58156511-58156530 None:intergenic 30.0%
! AGTTTTCTACAAATGTTCGA+TGG - chr8.2:58156774-58156793 MS.gene016419:intron 30.0%
! CTTTTCTTAATGGAGATAGA+TGG - chr8.2:58157286-58157305 MS.gene016419:CDS 30.0%
! GATCAATTGTAAGGATCTTT+TGG - chr8.2:58155590-58155609 MS.gene016419:CDS 30.0%
! GCTATAAATTTTGTGCATCT+GGG + chr8.2:58156510-58156529 None:intergenic 30.0%
! GGAGATTTTATTAGTCCAAA+TGG - chr8.2:58157111-58157130 MS.gene016419:CDS 30.0%
! GTCTTCTTTTCTTGATGTTT+TGG - chr8.2:58155659-58155678 MS.gene016419:CDS 30.0%
!! GTTGCAGTTTTGTAATACAA+CGG + chr8.2:58156896-58156915 None:intergenic 30.0%
!! TTCTTTTCTTGATGTTTTGG+AGG - chr8.2:58155662-58155681 MS.gene016419:CDS 30.0%
!!! GTCCTTTTGTCACTTTTATT+AGG + chr8.2:58156145-58156164 None:intergenic 30.0%
!!! TTCTGTAGAGTTTTTGAGAT+TGG + chr8.2:58155891-58155910 None:intergenic 30.0%
AATAGCTCTTTGTCTTATGG+AGG - chr8.2:58155633-58155652 MS.gene016419:CDS 35.0%
ACAGAACTCAAGTTTCCAAA+AGG + chr8.2:58157027-58157046 None:intergenic 35.0%
ATAGCTCTTTGTCTTATGGA+GGG - chr8.2:58155634-58155653 MS.gene016419:CDS 35.0%
CGACAATTTGAACAACTTCT+CGG + chr8.2:58155463-58155482 None:intergenic 35.0%
GAAATTCCTGTGTTCATGTT+AGG + chr8.2:58156982-58157001 None:intergenic 35.0%
GACAATTTGAACAACTTCTC+GGG + chr8.2:58155462-58155481 None:intergenic 35.0%
GTATGCAATATATTCGTCCT+CGG - chr8.2:58155747-58155766 MS.gene016419:CDS 35.0%
GTTCAGTATTTATCTGACCA+TGG - chr8.2:58155516-58155535 MS.gene016419:CDS 35.0%
GTTGTTGAGTAATTCTTCCA+AGG + chr8.2:58157069-58157088 None:intergenic 35.0%
TCAAGTCCTTAAAAGTTCCA+TGG + chr8.2:58155536-58155555 None:intergenic 35.0%
TCTTTATGATGAAGCCAGTT+TGG + chr8.2:58156013-58156032 None:intergenic 35.0%
TTAGGGTGGAAAAGACTAAA+TGG - chr8.2:58156203-58156222 MS.gene016419:CDS 35.0%
! AATTGCAATGTTTCGCCTTT+TGG - chr8.2:58157009-58157028 MS.gene016419:CDS 35.0%
! ATCTGACCATGGAACTTTTA+AGG - chr8.2:58155527-58155546 MS.gene016419:CDS 35.0%
! GGAAGCTTTGATCAATTGTA+AGG - chr8.2:58155581-58155600 MS.gene016419:CDS 35.0%
!! GGAACAGTCGATTTCATTTT+CGG - chr8.2:58156862-58156881 MS.gene016419:CDS 35.0%
!! GTTCAAATTGTCGATTCAAG+TGG - chr8.2:58155470-58155489 MS.gene016419:CDS 35.0%
!!! GCATTAACTGCAGTTTTGAA+AGG - chr8.2:58155492-58155511 MS.gene016419:CDS 35.0%
AACCATCAATGCATGTTTGC+TGG + chr8.2:58155829-58155848 None:intergenic 40.0%
AAGAATAGGGTCAAGTGGAA+GGG - chr8.2:58157216-58157235 MS.gene016419:CDS 40.0%
AAGCACTCAACCAAGTTTCA+AGG + chr8.2:58155689-58155708 None:intergenic 40.0%
AATGACCCTAACATGAACAC+AGG - chr8.2:58156973-58156992 MS.gene016419:CDS 40.0%
ACCGTGATCTATGTGAAGAA+AGG - chr8.2:58156163-58156182 MS.gene016419:intron 40.0%
AGCTTAAAATCTAGACCGTG+TGG - chr8.2:58156431-58156450 MS.gene016419:CDS 40.0%
CAGAACACAATAACAGCACA+AGG - chr8.2:58156946-58156965 MS.gene016419:CDS 40.0%
CATCATCACATGGCTTAACA+AGG - chr8.2:58155931-58155950 MS.gene016419:intron 40.0%
CCCTTTCTTCACATAGATCA+CGG + chr8.2:58156167-58156186 None:intergenic 40.0%
CCGTGATCTATGTGAAGAAA+GGG - chr8.2:58156164-58156183 MS.gene016419:intron 40.0%
CTGCAAAAACGATACCAATG+AGG + chr8.2:58155263-58155282 None:intergenic 40.0%
CTTGTTAAGCCATGTGATGA+TGG + chr8.2:58155933-58155952 None:intergenic 40.0%
GAATTTCAGAATGTTGGAGG+TGG - chr8.2:58157183-58157202 MS.gene016419:CDS 40.0%
GACTTTACCATAGGCCTTAA+AGG + chr8.2:58155160-58155179 None:intergenic 40.0%
GATACCAATGAGGACAATTG+TGG + chr8.2:58155253-58155272 None:intergenic 40.0%
GCTGAATTTCAGAATGTTGG+AGG - chr8.2:58157180-58157199 MS.gene016419:CDS 40.0%
TAAAATCTAGACCGTGTGGT+CGG - chr8.2:58156435-58156454 MS.gene016419:CDS 40.0%
TAAATGTTGCACCAGAAGCA+GGG + chr8.2:58157314-58157333 None:intergenic 40.0%
TACATGCAGACTGACATATC+AGG + chr8.2:58156462-58156481 None:intergenic 40.0%
TACCAGCAAACATGCATTGA+TGG - chr8.2:58155824-58155843 MS.gene016419:intron 40.0%
TCCAAATGGATGGTTACCTT+GGG - chr8.2:58157125-58157144 MS.gene016419:CDS 40.0%
TGGTGCTTCCATGAAGAATA+GGG - chr8.2:58157203-58157222 MS.gene016419:CDS 40.0%
TTAAATGTTGCACCAGAAGC+AGG + chr8.2:58157315-58157334 None:intergenic 40.0%
TTGTCCACAATTGTCCTCAT+TGG - chr8.2:58155246-58155265 MS.gene016419:CDS 40.0%
TTTCCTTCGAACTTCGAACA+TGG + chr8.2:58155199-58155218 None:intergenic 40.0%
! CACGGTCTAGATTTTAAGCT+CGG + chr8.2:58156431-58156450 None:intergenic 40.0%
! TTGTCATTAGTGCTACTGCT+TGG + chr8.2:58156741-58156760 None:intergenic 40.0%
!! ATAGGCTTTAAGAACACAGC+TGG - chr8.2:58156703-58156722 MS.gene016419:intron 40.0%
!! ATGTCTTCCTTTAAGGCCTA+TGG - chr8.2:58155150-58155169 MS.gene016419:CDS 40.0%
!! CATTGGTATCGTTTTTGCAG+CGG - chr8.2:58155263-58155282 MS.gene016419:CDS 40.0%
!! TGATTCGTCGACTTTACCAT+AGG + chr8.2:58155169-58155188 None:intergenic 40.0%
!! TTTTGGAGGACCTTGAAACT+TGG - chr8.2:58155676-58155695 MS.gene016419:CDS 40.0%
AAGCCATGTTCGAAGTTCGA+AGG - chr8.2:58155193-58155212 MS.gene016419:CDS 45.0%
AATGGATGGTTACCTTGGGT+TGG - chr8.2:58157129-58157148 MS.gene016419:CDS 45.0%
ACAGTCTTGCCATCATCACA+TGG - chr8.2:58155921-58155940 MS.gene016419:intron 45.0%
ACATTGTTGTCGCGAAAGAC+GGG - chr8.2:58156077-58156096 MS.gene016419:intron 45.0%
ACCCAAGGTAACCATCCATT+TGG + chr8.2:58157129-58157148 None:intergenic 45.0%
CCACTTGACCCTATTCTTCA+TGG + chr8.2:58157214-58157233 None:intergenic 45.0%
CCATGAAGAATAGGGTCAAG+TGG - chr8.2:58157211-58157230 MS.gene016419:CDS 45.0%
CCTTAGTCCTCTTGTTCAAC+CGG - chr8.2:58155422-58155441 MS.gene016419:CDS 45.0%
CTTAGTCCTCTTGTTCAACC+GGG - chr8.2:58155423-58155442 MS.gene016419:CDS 45.0%
GAAACTTGGTTGAGTGCTTC+AGG - chr8.2:58155690-58155709 MS.gene016419:CDS 45.0%
GAAGAATAGGGTCAAGTGGA+AGG - chr8.2:58157215-58157234 MS.gene016419:CDS 45.0%
GACATTGTTGTCGCGAAAGA+CGG - chr8.2:58156076-58156095 MS.gene016419:intron 45.0%
GCTTAACAAGGCTGCATCTT+CGG - chr8.2:58155943-58155962 MS.gene016419:intron 45.0%
GTCCAAATGGATGGTTACCT+TGG - chr8.2:58157124-58157143 MS.gene016419:CDS 45.0%
GTCTTTCGCGACAACAATGT+CGG + chr8.2:58156077-58156096 None:intergenic 45.0%
GTGGTGCTTCCATGAAGAAT+AGG - chr8.2:58157202-58157221 MS.gene016419:CDS 45.0%
GTTATTGTGTTCTGCTGTCC+TGG + chr8.2:58156940-58156959 None:intergenic 45.0%
TACCGCGAATGCAACATCTA+CGG - chr8.2:58156841-58156860 MS.gene016419:CDS 45.0%
TCAGTCTGCATGTAGTCACA+AGG - chr8.2:58156468-58156487 MS.gene016419:CDS 45.0%
TCGAACTTCGAACATGGCTT+GGG + chr8.2:58155193-58155212 None:intergenic 45.0%
TGTTGCATTCGCGGTAGAAT+TGG + chr8.2:58156837-58156856 None:intergenic 45.0%
TTACCAAGACAACCTATGCC+AGG - chr8.2:58156919-58156938 MS.gene016419:CDS 45.0%
TTCCGTAGATGTTGCATTCG+CGG + chr8.2:58156846-58156865 None:intergenic 45.0%
TTCGAACTTCGAACATGGCT+TGG + chr8.2:58155194-58155213 None:intergenic 45.0%
! ACGAGCATTGTTGTGAGCAA+CGG + chr8.2:58155298-58155317 None:intergenic 45.0%
!! ATCGTTTTTGCAGCGGTGTT+TGG - chr8.2:58155270-58155289 MS.gene016419:CDS 45.0%
!! GTTACCTTGGGTTGGAGATT+CGG - chr8.2:58157137-58157156 MS.gene016419:CDS 45.0%
!!! GCTACTGCTTGGTGTTTTTG+AGG + chr8.2:58156730-58156749 None:intergenic 45.0%
ACATATCAGGACCGACCACA+CGG + chr8.2:58156449-58156468 None:intergenic 50.0%
CCGGTTGAACAAGAGGACTA+AGG + chr8.2:58155425-58155444 None:intergenic 50.0%
GATAGATGGATCCCTGCTTC+TGG - chr8.2:58157300-58157319 MS.gene016419:CDS 50.0%
TGTCCTGGCATAGGTTGTCT+TGG + chr8.2:58156925-58156944 None:intergenic 50.0%
GTGTTCTGCTGTCCTGGCAT+AGG + chr8.2:58156934-58156953 None:intergenic 55.0%
TGCTGACCCGGTTGAACAAG+AGG + chr8.2:58155432-58155451 None:intergenic 55.0%
TTGTCGCGAAAGACGGGAGT+GGG - chr8.2:58156083-58156102 MS.gene016419:intron 55.0%
! TCGGGTCGTATTTGCTGACC+CGG + chr8.2:58155444-58155463 None:intergenic 55.0%
GTTGTCGCGAAAGACGGGAG+TGG - chr8.2:58156082-58156101 MS.gene016419:intron 60.0%
!! TTGGGTTGGAGATTCGGCGC+CGG - chr8.2:58157143-58157162 MS.gene016419:CDS 60.0%
! GGCGCCGAATCTCCAACCCA+AGG + chr8.2:58157144-58157163 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 58155150 58157347 58155150 ID=MS.gene016419
chr8.2 mRNA 58155150 58157347 58155150 ID=MS.gene016419.t1;Parent=MS.gene016419
chr8.2 exon 58156786 58157347 58156786 ID=MS.gene016419.t1.exon1;Parent=MS.gene016419.t1
chr8.2 CDS 58156786 58157347 58156786 ID=cds.MS.gene016419.t1;Parent=MS.gene016419.t1
chr8.2 exon 58156175 58156678 58156175 ID=MS.gene016419.t1.exon2;Parent=MS.gene016419.t1
chr8.2 CDS 58156175 58156678 58156175 ID=cds.MS.gene016419.t1;Parent=MS.gene016419.t1
chr8.2 exon 58155150 58155826 58155150 ID=MS.gene016419.t1.exon3;Parent=MS.gene016419.t1
chr8.2 CDS 58155150 58155826 58155150 ID=cds.MS.gene016419.t1;Parent=MS.gene016419.t1
Gene Sequence

>MS.gene016419

ATGTCTTCCTTTAAGGCCTATGGTAAAGTCGACGAATCAGCCCAAGCCATGTTCGAAGTTCGAAGGAAATCGCGAAAGCGAATAACTATCATAAGCTTGTCCACAATTGTCCTCATTGGTATCGTTTTTGCAGCGGTGTTTGGAACCGTTGCTCACAACAATGCTCGTAATGATGACAACAACAACAATAATGATAACGATGATCAATCTCTTTCAAGTTCAATTAAGGCTGTTTGTGATGTTACATTGTACAAGGATTCATGTGAAAGCAGCCTTAGTCCTCTTGTTCAACCGGGTCAGCAAATACGACCCGAGAAGTTGTTCAAATTGTCGATTCAAGTGGCATTAACTGCAGTTTTGAAAGGTGTTCAGTATTTATCTGACCATGGAACTTTTAAGGACTTGAACTTGAATTTGGATAATAGAACAAAGGAAGCTTTGATCAATTGTAAGGATCTTTTGGGTCTTGCTGTTGATCATTTGAATAGCTCTTTGTCTTATGGAGGGAAGTCTTCTTTTCTTGATGTTTTGGAGGACCTTGAAACTTGGTTGAGTGCTTCAGGTAAACTTTATAATTAAGCATTTATATACTTTTTTGTATGCAATATATTCGTCCTCGGCATAAGTTAATTTATACTTCATAACAAGCATTGTTTATTCATCTAACAGGTACTTACCAGCAAACATGCATTGATGGTTTAGAACAAGCAGAAGAAGCATTAAAGTCTAGTATTACAACCAATCTCAAAAACTCTACAGAATTTACGAGCAACAGTCTTGCCATCATCACATGGCTTAACAAGGCTGCATCTTCGGTGAACTTTAGACGCTTACTGAGTTTATCGCATCAAAATGAAGAACCAAACTGGCTTCATCATAAAGACAGAAAGTTACTTCAAAAAGACACTGATTTGAAGAAGAAAGCCGACATTGTTGTCGCGAAAGACGGGAGTGGGAAATACAAAACAATTTCAGCTGCATTGAAACATGTCCCTAATAAAAGTGACAAAAGGACCGTGATCTATGTGAAGAAAGGGATTTATTATGAAAATGTTAGGGTGGAAAAGACTAAATGGAATGTCATGATAATTGGTGATGGAATGAATGTTACTATTGTTTCTGGAAGTCTTAATTTTATAGATGGCACACCAACATTTTCAACAGCAACATTTGGTATGTCAAACTTTCCTTTAAATTGAAATTAAGTAATTATATACAACATTTTTTCGATTCAGATTTCAATGCTGATTTTTTATATTTTTTTTGAGAATTAAAACACCGAGCTTAAAATCTAGACCGTGTGGTCGGTCCTGATATGTCAGTCTGCATGTAGTCACAAGGTTGTGAATGCACACAACCCAGATGCACAAAATTTATAGCTATTCTATTTCTTTTTGCGTATCAATTTGAAAACTTCTTATTCTCCAACAAAGAAATAATCATAAAAAATCTTTTAACATGATTTATAAAACTGTCTAACCATATTAATTTATTGTTTCTTTTCTATGGTTTAATATTCAGCTGTGTTTGGGAGAAATTTCATTGCAAGAGACATAGGCTTTAAGAACACAGCTGGTCCTCAAAAACACCAAGCAGTAGCACTAATGACAAGTGCAGATCAAGCAGTTTTCTACAAATGTTCGATGGATGCATATCAAGACACTCTCTACGCTCACTCAAATCGCCAATTCTACCGCGAATGCAACATCTACGGAACAGTCGATTTCATTTTCGGAAACTCAGCCGTTGTATTACAAAACTGCAACATTTTACCAAGACAACCTATGCCAGGACAGCAGAACACAATAACAGCACAAGGCAAAAATGACCCTAACATGAACACAGGAATTTCAATTCAAAATTGCAATGTTTCGCCTTTTGGAAACTTGAGTTCTGTTAAAACATATTTAGGTAGACCTTGGAAGAATTACTCAACAACAGTGTTTATGCAATCAAACTTGGGAGATTTTATTAGTCCAAATGGATGGTTACCTTGGGTTGGAGATTCGGCGCCGGATACTATATTTTATGCTGAATTTCAGAATGTTGGAGGTGGTGCTTCCATGAAGAATAGGGTCAAGTGGAAGGGTTTGAAAACTATTACAAGTAAACAAGCTCATAAGTTTACAGTTAAGGCTTTTCTTAATGGAGATAGATGGATCCCTGCTTCTGGTGCAACATTTAAATCTTCTCTGTAA
Protein sequence

>MS.gene016419.t1

MSSFKAYGKVDESAQAMFEVRRKSRKRITIISLSTIVLIGIVFAAVFGTVAHNNARNDDNNNNNDNDDQSLSSSIKAVCDVTLYKDSCESSLSPLVQPGQQIRPEKLFKLSIQVALTAVLKGVQYLSDHGTFKDLNLNLDNRTKEALINCKDLLGLAVDHLNSSLSYGGKSSFLDVLEDLETWLSASGTYQQTCIDGLEQAEEALKSSITTNLKNSTEFTSNSLAIITWLNKAASSVNFRRLLSLSHQNEEPNWLHHKDRKLLQKDTDLKKKADIVVAKDGSGKYKTISAALKHVPNKSDKRTVIYVKKGIYYENVRVEKTKWNVMIIGDGMNVTIVSGSLNFIDGTPTFSTATFAVFGRNFIARDIGFKNTAGPQKHQAVALMTSADQAVFYKCSMDAYQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVLQNCNILPRQPMPGQQNTITAQGKNDPNMNTGISIQNCNVSPFGNLSSVKTYLGRPWKNYSTTVFMQSNLGDFISPNGWLPWVGDSAPDTIFYAEFQNVGGGASMKNRVKWKGLKTITSKQAHKFTVKAFLNGDRWIPASGATFKSSL