AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016512


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016512.t1 MTR_8g041390 97.250 400 6 1 1 400 1 395 0.0 801
MS.gene016512.t1 MTR_3g012420 69.430 386 106 4 1 377 1 383 0.0 542
MS.gene016512.t1 MTR_1g030580 46.174 379 195 3 6 380 9 382 1.48e-115 342
MS.gene016512.t1 MTR_3g072500 44.730 389 199 6 3 381 10 392 8.23e-114 338
MS.gene016512.t1 MTR_1g068630 48.955 335 163 3 3 336 5 332 1.26e-110 329
MS.gene016512.t1 MTR_7g100050 46.316 380 191 5 1 378 1 369 1.71e-110 329
MS.gene016512.t1 MTR_3g072530 41.854 356 197 4 3 353 1 351 1.47e-104 313
MS.gene016512.t1 MTR_3g072560 47.059 340 170 4 9 348 14 343 1.34e-103 312
MS.gene016512.t1 MTR_1g030600 44.152 342 187 3 9 349 14 352 6.36e-99 300
MS.gene016512.t1 MTR_3g072520 46.064 343 180 5 10 350 6 345 1.73e-93 286
MS.gene016512.t1 MTR_0096s0100 42.515 334 183 4 13 344 18 344 3.37e-91 279
MS.gene016512.t1 MTR_1g074120 39.645 338 195 4 9 344 12 342 7.37e-82 255
MS.gene016512.t1 MTR_1g074070 39.583 336 192 4 9 343 12 337 5.08e-81 253
MS.gene016512.t1 MTR_1g051120 39.286 336 195 4 9 343 12 339 6.10e-81 253
MS.gene016512.t1 MTR_1g074160 38.329 347 203 5 3 345 1 340 1.30e-79 249
MS.gene016512.t1 MTR_3g112480 38.872 337 196 2 10 337 17 352 2.20e-79 250
MS.gene016512.t1 MTR_2g007990 40.116 344 195 5 7 346 9 345 5.55e-79 249
MS.gene016512.t1 MTR_2g007960 35.492 386 227 9 7 375 6 386 8.43e-78 246
MS.gene016512.t1 MTR_3g072500 42.857 294 152 6 98 381 2 289 1.80e-77 241
MS.gene016512.t1 MTR_1g074020 37.430 358 210 5 3 357 1 347 2.77e-77 243
MS.gene016512.t1 MTR_7g111830 39.091 330 197 2 18 344 12 340 1.98e-76 242
MS.gene016512.t1 MTR_6g036450 36.202 337 208 4 10 344 13 344 2.21e-76 241
MS.gene016512.t1 MTR_6g081840 39.557 316 190 1 22 337 19 333 1.57e-75 239
MS.gene016512.t1 MTR_1g073990 38.719 359 197 8 9 360 12 354 1.81e-75 238
MS.gene016512.t1 MTR_1g023180 37.391 345 195 3 10 337 18 358 3.09e-75 239
MS.gene016512.t1 MTR_2g027030 38.415 328 197 4 10 336 9 332 4.29e-75 238
MS.gene016512.t1 MTR_3g095460 36.070 341 206 4 10 345 2 335 2.37e-74 235
MS.gene016512.t1 MTR_2g007970 38.000 350 214 3 18 367 17 363 3.88e-74 236
MS.gene016512.t1 MTR_3g072500 44.275 262 143 2 3 264 10 268 5.28e-74 232
MS.gene016512.t1 MTR_4g094340 37.861 346 203 8 10 351 6 343 3.50e-73 233
MS.gene016512.t1 MTR_4g094340 38.068 352 205 9 5 351 18 361 6.34e-73 233
MS.gene016512.t1 MTR_8g006010 37.465 355 199 7 18 369 15 349 5.26e-72 230
MS.gene016512.t1 MTR_2g007260 37.403 385 219 8 18 395 19 388 2.97e-71 229
MS.gene016512.t1 MTR_2g016710 35.329 334 209 2 7 340 2 328 6.19e-71 227
MS.gene016512.t1 MTR_4g094352 36.483 381 230 8 7 381 6 380 1.01e-70 227
MS.gene016512.t1 MTR_3g095420 34.946 372 217 8 15 380 9 361 1.06e-70 226
MS.gene016512.t1 MTR_4g094362 36.522 345 212 4 8 351 9 347 9.48e-70 224
MS.gene016512.t1 MTR_2g102340 33.512 373 223 7 10 369 9 369 2.73e-67 218
MS.gene016512.t1 MTR_4g094342 35.258 329 207 4 6 331 6 331 1.19e-66 216
MS.gene016512.t1 MTR_8g006090 38.235 340 201 5 11 346 6 340 1.67e-66 215
MS.gene016512.t1 MTR_2g065550 35.882 340 199 6 11 341 5 334 4.31e-66 215
MS.gene016512.t1 MTR_1g070175 31.361 338 223 2 9 346 12 340 5.12e-66 214
MS.gene016512.t1 MTR_1g114210 34.211 342 219 4 3 344 1 336 1.13e-65 213
MS.gene016512.t1 MTR_5g021160 34.795 342 216 4 10 350 4 339 5.72e-65 211
MS.gene016512.t1 MTR_4g094360 35.882 340 210 5 8 345 9 342 1.06e-64 212
MS.gene016512.t1 MTR_1g038560 34.627 335 207 5 13 344 3 328 3.32e-64 209
MS.gene016512.t1 MTR_3g095450 35.905 337 207 6 15 347 7 338 3.92e-64 209
MS.gene016512.t1 MTR_1g030400 32.081 346 225 3 22 358 16 360 8.03e-64 209
MS.gene016512.t1 MTR_8g006120 36.070 341 203 6 11 343 5 338 5.51e-63 207
MS.gene016512.t1 MTR_3g072500 46.445 211 111 1 3 213 10 218 1.69e-62 201
MS.gene016512.t1 MTR_3g112480 38.790 281 162 2 66 337 18 297 4.89e-62 203
MS.gene016512.t1 MTR_3g072530 36.120 299 149 6 3 263 1 295 5.20e-62 202
MS.gene016512.t1 MTR_4g106720 32.738 336 216 5 15 346 13 342 1.82e-61 202
MS.gene016512.t1 MTR_8g092650 33.631 336 214 4 15 345 7 338 1.45e-60 200
MS.gene016512.t1 MTR_2g016710 33.766 308 197 2 7 314 2 302 2.17e-59 196
MS.gene016512.t1 MTR_3g095440 37.092 337 203 5 15 347 7 338 3.02e-58 194
MS.gene016512.t1 MTR_5g034910 34.161 322 203 5 18 337 12 326 5.31e-58 193
MS.gene016512.t1 MTR_1g014510 31.143 350 233 5 3 348 1 346 1.92e-57 194
MS.gene016512.t1 MTR_4g129650 33.636 330 202 5 18 341 13 331 1.00e-56 190
MS.gene016512.t1 MTR_4g094340 39.394 264 149 7 92 351 21 277 3.95e-56 186
MS.gene016512.t1 MTR_8g006050 34.125 337 186 8 42 375 23 326 3.01e-55 186
MS.gene016512.t1 MTR_8g006090 37.338 308 184 5 11 314 6 308 1.87e-54 182
MS.gene016512.t1 MTR_3g090550 33.846 325 204 5 20 344 16 329 1.99e-54 184
MS.gene016512.t1 MTR_5g034990 31.176 340 224 4 7 345 8 338 3.31e-54 183
MS.gene016512.t1 MTR_0103s0090 33.628 339 211 9 9 343 7 335 4.39e-54 183
MS.gene016512.t1 MTR_1g074160 37.358 265 156 4 3 264 1 258 5.17e-54 180
MS.gene016512.t1 MTR_5g034980 31.212 330 206 6 16 337 10 326 3.63e-53 181
MS.gene016512.t1 MTR_4g094360 33.871 310 199 4 7 314 8 313 4.98e-53 179
MS.gene016512.t1 MTR_5g069040 28.219 365 241 4 3 347 1 364 8.65e-51 175
MS.gene016512.t1 MTR_3g019050 28.446 341 233 3 3 336 1 337 5.51e-50 173
MS.gene016512.t1 MTR_5g034930 32.424 330 212 6 18 344 11 332 6.07e-50 172
MS.gene016512.t1 MTR_8g006090 38.403 263 157 3 84 346 3 260 1.69e-49 169
MS.gene016512.t1 MTR_5g025340 32.456 342 212 5 10 337 7 343 2.80e-49 171
MS.gene016512.t1 MTR_5g068790 26.425 386 273 4 3 379 1 384 1.25e-47 167
MS.gene016512.t1 MTR_6g007760 31.746 315 208 5 3 316 1 309 3.44e-47 164
MS.gene016512.t1 MTR_5g025290 30.994 342 217 6 10 337 8 344 6.00e-47 165
MS.gene016512.t1 MTR_5g025290 30.994 342 217 6 10 337 36 372 6.09e-47 166
MS.gene016512.t1 MTR_6g007743 30.769 325 205 6 33 347 32 346 1.17e-46 164
MS.gene016512.t1 MTR_5g025370 30.792 341 221 3 10 337 7 345 9.23e-46 162
MS.gene016512.t1 MTR_5g025400 31.858 339 216 3 12 337 10 346 9.52e-46 162
MS.gene016512.t1 MTR_5g089390 29.907 321 213 4 17 336 18 327 1.30e-45 160
MS.gene016512.t1 MTR_5g021160 33.588 262 167 4 90 350 1 256 4.13e-45 157
MS.gene016512.t1 MTR_0103s0090 35.857 251 149 6 96 343 3 244 8.13e-45 156
MS.gene016512.t1 MTR_5g034970 31.915 329 190 7 17 337 11 313 8.76e-45 158
MS.gene016512.t1 MTR_4g094340 35.907 259 155 7 10 264 6 257 1.77e-44 155
MS.gene016512.t1 MTR_4g094360 34.884 258 160 5 90 345 44 295 2.16e-44 157
MS.gene016512.t1 MTR_5g025330 31.858 339 212 5 13 337 9 342 2.53e-44 162
MS.gene016512.t1 MTR_4g094340 36.226 265 157 8 5 264 18 275 2.62e-44 155
MS.gene016512.t1 MTR_6g007750 31.875 320 205 6 33 348 32 342 5.24e-44 157
MS.gene016512.t1 MTR_5g021160 34.572 269 168 4 10 274 4 268 3.26e-43 152
MS.gene016512.t1 MTR_1g051120 34.951 206 130 1 9 214 12 213 5.12e-43 150
MS.gene016512.t1 MTR_8g092650 33.891 239 149 4 112 345 26 260 7.22e-43 151
MS.gene016512.t1 MTR_1g051120 35.961 203 126 1 9 211 12 210 1.90e-42 150
MS.gene016512.t1 MTR_6g007740 30.060 336 215 7 22 347 21 346 2.35e-42 155
MS.gene016512.t1 MTR_6g007747 31.034 319 204 5 33 348 32 337 2.93e-42 152
MS.gene016512.t1 MTR_1g052205 36.245 229 121 6 124 344 11 222 5.57e-42 148
MS.gene016512.t1 MTR_3g112480 34.956 226 137 2 121 337 1 225 8.50e-41 145
MS.gene016512.t1 MTR_8g006090 38.346 266 152 6 11 272 6 263 7.86e-40 144
MS.gene016512.t1 MTR_3g095440 34.646 254 159 4 15 264 7 257 2.26e-39 142
MS.gene016512.t1 MTR_8g072350 28.024 339 225 5 13 337 9 342 2.76e-39 144
MS.gene016512.t1 MTR_2g102340 31.298 262 161 5 10 264 35 284 1.29e-38 141
MS.gene016512.t1 MTR_4g129650 33.191 235 143 4 110 341 1 224 1.64e-38 139
MS.gene016512.t1 MTR_6g007753 30.690 290 188 5 63 348 343 623 1.86e-37 144
MS.gene016512.t1 MTR_6g007753 30.493 223 147 3 126 348 85 299 2.59e-26 111
MS.gene016512.t1 MTR_6g007757 30.091 329 215 6 18 342 17 334 5.65e-37 138
MS.gene016512.t1 MTR_4g100840 28.333 360 225 11 1 343 2 345 1.93e-34 131
MS.gene016512.t1 MTR_8g076800 59.259 108 42 2 180 287 139 244 8.41e-34 127
MS.gene016512.t1 MTR_4g094342 35.754 179 108 2 6 178 6 183 2.68e-32 122
MS.gene016512.t1 MTR_5g034980 28.986 276 169 8 16 283 10 266 1.40e-31 122
MS.gene016512.t1 MTR_4g094340 36.019 211 124 7 5 210 18 222 1.85e-30 117
MS.gene016512.t1 MTR_5g012650 29.167 336 217 9 10 336 5 328 5.15e-30 119
MS.gene016512.t1 MTR_6g007470 56.322 87 37 1 201 287 99 184 3.89e-26 105
MS.gene016512.t1 MTR_1g068720 40.268 149 78 5 208 346 93 240 1.01e-25 104
MS.gene016512.t1 MTR_1g068720 44.872 78 43 0 9 86 10 87 6.46e-15 74.3
MS.gene016512.t1 MTR_1g014790 35.252 139 86 2 86 224 36 170 3.41e-24 99.4
MS.gene016512.t1 MTR_8g006090 38.624 189 108 4 84 272 3 183 1.05e-23 98.6
MS.gene016512.t1 MTR_6g007757 26.721 247 166 6 18 260 17 252 1.08e-22 97.1
MS.gene016512.t1 MTR_4g094348 33.858 127 77 2 93 213 2 127 2.72e-17 79.3
MS.gene016512.t1 MTR_3g093450 27.586 203 93 7 146 339 25 182 5.71e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016512.t1 AT5G07050 62.990 408 136 5 1 400 1 401 2.31e-180 508
MS.gene016512.t1 AT2G40900 52.747 364 154 5 10 367 7 358 1.34e-138 401
MS.gene016512.t1 AT3G56620 55.077 325 137 3 10 334 7 322 3.85e-128 374
MS.gene016512.t1 AT1G21890 47.594 374 182 5 10 372 7 377 1.84e-116 345
MS.gene016512.t1 AT2G39510 47.429 350 176 5 8 354 2 346 6.81e-113 335
MS.gene016512.t1 AT2G37460 46.505 372 181 6 3 370 4 361 1.12e-111 332
MS.gene016512.t1 AT1G44800 46.269 335 175 2 5 339 2 331 1.51e-110 329
MS.gene016512.t1 AT4G08300 43.236 377 204 5 5 377 2 372 3.22e-107 320
MS.gene016512.t1 AT4G08290 45.015 331 179 2 6 336 5 332 1.22e-104 314
MS.gene016512.t1 AT1G21890 50.000 310 149 2 10 314 7 315 1.43e-103 310
MS.gene016512.t1 AT5G13670 41.514 383 205 6 9 388 3 369 8.53e-100 301
MS.gene016512.t1 AT2G37450 44.375 320 149 4 18 336 13 304 1.17e-83 259
MS.gene016512.t1 AT1G75500 38.095 378 211 6 10 368 16 389 6.88e-81 253
MS.gene016512.t1 AT1G75500 38.095 378 211 6 10 368 16 389 6.88e-81 253
MS.gene016512.t1 AT1G09380 38.298 329 192 4 10 333 4 326 1.25e-80 252
MS.gene016512.t1 AT3G18200 40.059 337 191 5 3 337 24 351 6.33e-76 241
MS.gene016512.t1 AT4G08290 41.473 258 148 2 6 263 5 259 3.59e-72 228
MS.gene016512.t1 AT4G30420 37.576 330 198 4 10 336 5 329 2.74e-71 229
MS.gene016512.t1 AT4G30420 37.771 323 193 4 17 336 2 319 1.75e-70 226
MS.gene016512.t1 AT3G30340 36.061 330 205 3 21 349 18 342 1.81e-70 226
MS.gene016512.t1 AT5G64700 34.985 343 215 3 10 347 4 343 4.55e-69 222
MS.gene016512.t1 AT3G53210 36.391 327 204 2 10 336 6 328 4.61e-68 220
MS.gene016512.t1 AT1G25270 35.583 326 207 3 12 337 1 323 7.98e-64 208
MS.gene016512.t1 AT1G68170 35.366 328 210 2 9 336 8 333 1.34e-61 203
MS.gene016512.t1 AT1G68170 35.692 325 207 2 12 336 1 323 1.74e-61 202
MS.gene016512.t1 AT1G43650 35.258 329 204 4 13 340 6 326 3.22e-61 201
MS.gene016512.t1 AT4G28040 33.134 335 202 7 13 343 7 323 2.57e-60 199
MS.gene016512.t1 AT4G28040 33.134 335 202 7 13 343 7 323 2.57e-60 199
MS.gene016512.t1 AT4G28040 33.134 335 202 7 13 343 7 323 2.57e-60 199
MS.gene016512.t1 AT4G28040 33.134 335 202 7 13 343 7 323 2.57e-60 199
MS.gene016512.t1 AT4G28040 33.134 335 202 7 13 343 7 323 2.57e-60 199
MS.gene016512.t1 AT2G37450 43.933 239 126 3 99 336 1 232 3.72e-60 196
MS.gene016512.t1 AT4G01440 34.277 318 199 4 29 342 25 336 4.04e-59 196
MS.gene016512.t1 AT4G01430 30.791 354 231 7 26 377 21 362 5.53e-54 183
MS.gene016512.t1 AT5G40210 35.542 332 186 7 16 345 15 320 5.59e-54 182
MS.gene016512.t1 AT1G01070 32.407 324 206 5 18 336 20 335 5.20e-52 178
MS.gene016512.t1 AT4G01440 33.449 287 184 3 29 314 25 305 1.03e-51 176
MS.gene016512.t1 AT1G11450 32.298 322 207 4 18 336 20 333 4.01e-51 175
MS.gene016512.t1 AT5G40240 31.045 335 225 5 10 342 16 346 3.01e-50 173
MS.gene016512.t1 AT5G40240 31.045 335 225 5 10 342 16 346 3.01e-50 173
MS.gene016512.t1 AT5G40240 31.045 335 225 5 10 342 30 360 5.07e-50 173
MS.gene016512.t1 AT3G28050 30.124 322 215 4 16 336 14 326 1.45e-49 171
MS.gene016512.t1 AT2G37450 43.396 212 112 3 126 336 61 265 1.61e-49 169
MS.gene016512.t1 AT2G37450 63.265 49 18 0 18 66 13 61 1.07e-12 68.6
MS.gene016512.t1 AT1G11460 31.579 323 209 5 18 336 20 334 5.73e-49 169
MS.gene016512.t1 AT5G40230 31.737 334 224 4 10 342 17 347 9.72e-49 169
MS.gene016512.t1 AT3G28100 31.915 329 213 6 16 340 16 337 1.60e-48 168
MS.gene016512.t1 AT3G53210 36.437 247 153 2 90 336 29 271 7.57e-48 166
MS.gene016512.t1 AT3G53210 35.391 243 153 2 10 252 6 244 1.01e-46 161
MS.gene016512.t1 AT1G11450 33.219 292 184 4 48 336 6 289 1.67e-46 162
MS.gene016512.t1 AT3G30340 34.351 262 163 4 18 278 15 268 5.64e-46 159
MS.gene016512.t1 AT1G70260 27.011 348 245 4 3 344 1 345 7.78e-46 162
MS.gene016512.t1 AT1G11450 32.872 289 183 4 51 336 2 282 5.68e-45 157
MS.gene016512.t1 AT3G18200 38.696 230 130 5 110 337 1 221 1.33e-44 155
MS.gene016512.t1 AT4G01430 31.488 289 193 3 28 314 23 308 1.79e-44 157
MS.gene016512.t1 AT4G15540 30.058 346 221 5 4 344 3 332 3.24e-44 157
MS.gene016512.t1 AT4G15540 30.058 346 221 5 4 344 3 332 3.24e-44 157
MS.gene016512.t1 AT5G45370 30.383 339 223 4 10 337 16 352 5.70e-44 157
MS.gene016512.t1 AT5G45370 30.383 339 223 4 10 337 16 352 5.70e-44 157
MS.gene016512.t1 AT1G01070 31.399 293 195 4 45 336 1 288 5.94e-44 155
MS.gene016512.t1 AT5G64700 32.692 260 167 3 10 264 4 260 1.26e-43 153
MS.gene016512.t1 AT5G45370 30.488 328 213 3 10 337 16 328 2.64e-43 155
MS.gene016512.t1 AT3G28130 31.173 324 214 7 16 336 15 332 5.18e-43 154
MS.gene016512.t1 AT3G28070 30.183 328 220 5 16 340 19 340 2.76e-42 152
MS.gene016512.t1 AT3G28070 32.653 245 162 2 96 340 7 248 2.92e-42 149
MS.gene016512.t1 AT3G45870 29.762 336 227 3 3 331 1 334 1.41e-41 151
MS.gene016512.t1 AT4G01440 33.755 237 150 3 29 264 25 255 2.21e-41 147
MS.gene016512.t1 AT1G11450 30.667 300 197 4 18 314 20 311 2.39e-41 149
MS.gene016512.t1 AT3G28080 30.675 326 215 6 16 337 16 334 5.61e-41 149
MS.gene016512.t1 AT5G47470 30.571 350 208 10 5 339 21 350 6.58e-41 149
MS.gene016512.t1 AT5G47470 30.259 347 213 9 5 339 49 378 9.29e-41 149
MS.gene016512.t1 AT5G47470 30.259 347 213 9 5 339 49 378 1.10e-40 149
MS.gene016512.t1 AT4G01450 32.198 323 207 5 26 346 21 333 2.65e-39 144
MS.gene016512.t1 AT3G28130 33.745 243 154 5 96 336 9 246 3.00e-39 141
MS.gene016512.t1 AT3G28130 33.745 243 154 5 96 336 9 246 3.00e-39 141
MS.gene016512.t1 AT3G28080 32.780 241 157 3 98 337 9 245 3.26e-39 141
MS.gene016512.t1 AT3G28080 32.780 241 157 3 98 337 9 245 3.26e-39 141
MS.gene016512.t1 AT3G28080 32.780 241 157 3 98 337 9 245 3.26e-39 141
MS.gene016512.t1 AT3G28080 32.780 241 157 3 98 337 9 245 3.26e-39 141
MS.gene016512.t1 AT4G24980 29.032 310 149 6 28 337 1 239 3.49e-39 141
MS.gene016512.t1 AT3G28080 32.780 241 157 3 98 337 90 326 3.68e-38 141
MS.gene016512.t1 AT4G19185 29.641 334 222 5 15 337 22 353 1.61e-36 137
MS.gene016512.t1 AT4G01440 32.328 232 147 4 115 342 3 228 9.00e-36 132
MS.gene016512.t1 AT4G01440 32.328 232 147 4 115 342 3 228 9.00e-36 132
MS.gene016512.t1 AT4G01450 31.271 291 188 5 26 314 21 301 1.21e-35 134
MS.gene016512.t1 AT3G45870 28.840 319 218 3 3 314 1 317 3.24e-35 132
MS.gene016512.t1 AT1G43650 30.952 252 166 3 13 264 6 249 1.67e-34 129
MS.gene016512.t1 AT1G11450 31.452 248 159 4 92 336 2 241 2.68e-34 128
MS.gene016512.t1 AT4G16620 29.070 344 202 7 22 344 20 342 6.92e-33 127
MS.gene016512.t1 AT4G01450 33.480 227 139 5 26 250 21 237 1.49e-32 124
MS.gene016512.t1 AT3G28070 28.808 302 206 5 16 314 19 314 4.44e-32 124
MS.gene016512.t1 AT4G01450 34.300 207 125 4 26 230 21 218 6.22e-31 119
MS.gene016512.t1 AT3G28070 31.308 214 144 2 127 340 1 211 4.57e-30 116
MS.gene016512.t1 AT1G60050 25.073 343 247 6 9 343 8 348 9.14e-30 119
MS.gene016512.t1 AT3G28100 31.452 248 160 5 16 259 16 257 9.43e-30 116
MS.gene016512.t1 AT3G45870 29.572 257 173 2 3 252 1 256 2.02e-29 115
MS.gene016512.t1 AT3G28130 33.019 212 135 5 127 336 1 207 3.76e-28 110
MS.gene016512.t1 AT3G28080 28.049 328 167 9 16 337 16 280 4.77e-28 112
MS.gene016512.t1 AT3G28080 31.604 212 140 3 127 337 1 208 5.88e-28 110
MS.gene016512.t1 AT4G01430 28.692 237 156 6 142 377 1 225 2.18e-27 108
MS.gene016512.t1 AT5G45370 29.482 251 164 4 98 337 2 250 9.29e-27 108
MS.gene016512.t1 AT5G45370 29.482 251 164 4 98 337 2 250 9.29e-27 108
MS.gene016512.t1 AT4G19185 27.907 258 173 5 91 337 20 275 1.19e-26 108
MS.gene016512.t1 AT3G28080 29.218 243 109 6 98 337 9 191 3.40e-26 105
MS.gene016512.t1 AT3G28100 32.673 202 126 5 16 213 16 211 2.15e-23 98.6
MS.gene016512.t1 AT3G28130 28.629 248 169 6 16 260 15 257 2.39e-23 98.6
MS.gene016512.t1 AT4G16620 29.699 266 146 6 99 344 1 245 3.13e-23 98.2
MS.gene016512.t1 AT4G16620 29.699 266 146 6 99 344 1 245 3.13e-23 98.2
MS.gene016512.t1 AT3G45870 28.511 235 158 4 105 331 27 259 7.28e-23 98.2
MS.gene016512.t1 AT4G16620 28.632 234 133 4 22 241 20 233 7.11e-21 92.0
MS.gene016512.t1 AT3G28130 30.097 206 137 5 16 219 15 215 3.11e-19 86.3
MS.gene016512.t1 AT5G45370 28.054 221 146 4 128 337 74 292 2.70e-18 85.5
MS.gene016512.t1 AT3G45870 27.064 218 149 4 105 314 27 242 9.27e-17 79.7
MS.gene016512.t1 AT3G45870 27.064 218 149 4 105 314 27 242 9.27e-17 79.7
MS.gene016512.t1 AT3G45870 27.273 165 118 2 167 331 21 183 2.11e-12 67.0
MS.gene016512.t1 AT3G45870 27.564 156 104 3 105 252 27 181 6.27e-11 62.0

Find 80 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTTGAGCACCCTTTAT+TGG 0.161865 8.2:+59564811 None:intergenic
AAAATTCGGAATGTTATCTT+AGG 0.260272 8.2:+59567166 None:intergenic
TGATATTCCTTTGCCAATAA+AGG 0.262662 8.2:-59564824 MS.gene016512:CDS
GGAGCTATCTTGATTGTTAT+AGG 0.277036 8.2:-59564901 MS.gene016512:CDS
TAGGTTTATATTCTGTTCTA+TGG 0.281033 8.2:-59564882 MS.gene016512:CDS
GCTATGATATGCTTACAATT+TGG 0.300057 8.2:-59567406 MS.gene016512:CDS
ACTTCACTTGTGGTCTTCAT+TGG 0.318744 8.2:-59565742 MS.gene016512:CDS
TGAAAATTTGCAAGAAAATT+CGG 0.322415 8.2:+59567152 None:intergenic
TTATCATTGCCACCTTTGCT+TGG 0.363715 8.2:-59565975 MS.gene016512:CDS
GATCAAAATTTCTATTATGC+TGG 0.374704 8.2:-59566827 MS.gene016512:CDS
CAGGATCTTCTGAAAGAGAT+TGG 0.374788 8.2:-59566017 MS.gene016512:CDS
GATATTCCTTTGCCAATAAA+GGG 0.379436 8.2:-59564823 MS.gene016512:CDS
TATCATTGCCACCTTTGCTT+GGG 0.380505 8.2:-59565974 MS.gene016512:CDS
TGCTTACAATTTGGCTATGC+TGG 0.382541 8.2:-59567397 MS.gene016512:CDS
ATGCTAATGACATTATATAA+AGG 0.391959 8.2:-59566108 MS.gene016512:CDS
AATCTGTTCTGCAAGGATAA+AGG 0.397927 8.2:+59565112 None:intergenic
ATGTACAAGGGCTAGTGATT+AGG 0.401274 8.2:-59565202 MS.gene016512:CDS
GCTCAAATGAGTGGAAATTC+AGG 0.402269 8.2:-59564799 MS.gene016512:CDS
CTTCTCTATGGAGGATTGGT+TGG 0.405246 8.2:-59565675 MS.gene016512:CDS
AGGTTTATATTCTGTTCTAT+GGG 0.410985 8.2:-59564881 MS.gene016512:CDS
GATGATCATTGTTGCAATCA+TGG 0.415373 8.2:-59565138 MS.gene016512:CDS
ATCAAAATTTCTATTATGCT+GGG 0.431799 8.2:-59566826 MS.gene016512:CDS
CTCTCAAACATAAATGCAAA+TGG 0.436031 8.2:+59567280 None:intergenic
GTCCTATTGTGGAGATGGTA+TGG 0.436646 8.2:-59566086 MS.gene016512:CDS
GAGGTGCCAAGCAAAGATAT+TGG 0.444722 8.2:-59566157 MS.gene016512:CDS
AGGTGCCAAGCAAAGATATT+GGG 0.448969 8.2:-59566156 MS.gene016512:CDS
TTCTCTATGGAGGATTGGTT+GGG 0.451905 8.2:-59565674 MS.gene016512:CDS
GATCCTTCTCTATGGAGGAT+TGG 0.458481 8.2:-59565679 MS.gene016512:CDS
GCCCATACCATCTCCACAAT+AGG 0.458933 8.2:+59566084 None:intergenic
CTGAGCATGATCCTTCTCTA+TGG 0.462525 8.2:-59565687 MS.gene016512:CDS
TTCGGAATGTTATCTTAGGT+TGG 0.479766 8.2:+59567170 None:intergenic
GGACATAGTGGCTCATTCCT+TGG 0.492407 8.2:+59567344 None:intergenic
CTTGCAGAACAGATTTACTC+TGG 0.496224 8.2:-59565104 MS.gene016512:CDS
GATCATCATAAGTGGGCTAA+AGG 0.497400 8.2:+59565154 None:intergenic
GGGAATTGTGACCTCAAGCT+TGG 0.497579 8.2:-59565231 MS.gene016512:CDS
CATTTGCATTTATGTTTGAG+AGG 0.499498 8.2:-59567279 MS.gene016512:intron
CTAAAGGCAGTTGCAAAGAC+AGG 0.501855 8.2:+59565170 None:intergenic
CTCATTGCACAAGAGAAGGT+TGG 0.503653 8.2:+59566788 None:intergenic
TGGTATGAACATTATCACTA+AGG 0.506134 8.2:-59567377 MS.gene016512:CDS
GCCATCACAAAAGTCATGGC+TGG 0.507574 8.2:+59566755 None:intergenic
ATGCTTATTGCAAATGAAGA+AGG 0.513113 8.2:+59564715 None:intergenic
CTATGTGGGTGCAGTGTGAT+GGG 0.513384 8.2:-59564922 MS.gene016512:intron
GCAACAATGATCATCATAAG+TGG 0.519358 8.2:+59565146 None:intergenic
TTAGTAGTAAGCTCTCTAGT+AGG 0.522491 8.2:+59564691 None:intergenic
TGAGCACCCTTTATTGGCAA+AGG 0.522528 8.2:+59564817 None:intergenic
AGCTTGGCATACTATGTACA+AGG 0.527654 8.2:-59565215 MS.gene016512:CDS
TAAAGGTCCTATTGTGGAGA+TGG 0.529191 8.2:-59566091 MS.gene016512:CDS
TTGTTCCCAATATCTTTGCT+TGG 0.531263 8.2:+59566151 None:intergenic
ACTATGTGGGTGCAGTGTGA+TGG 0.535209 8.2:-59564923 MS.gene016512:intron
GGGCTAGTGATTAGGAAGAA+AGG 0.551748 8.2:-59565194 MS.gene016512:CDS
CAGAACAGATTTACTCTGGA+GGG 0.561325 8.2:-59565100 MS.gene016512:intron
ATCTCTTTCAGAAGATCCTG+TGG 0.563505 8.2:+59566020 None:intergenic
GATAAACGACGAGGACATAG+TGG 0.564461 8.2:+59567332 None:intergenic
ATGGAAGATCCTTACAGCAT+AGG 0.565176 8.2:+59565630 None:intergenic
ATGATCATTGTTGCAATCAT+GGG 0.565857 8.2:-59565137 MS.gene016512:CDS
AGACTAACCCAAGAAGAGCT+AGG 0.568023 8.2:+59567128 None:intergenic
TCCTATTGTGGAGATGGTAT+GGG 0.568336 8.2:-59566085 MS.gene016512:CDS
GTAATGTTTCATGTTCTCAA+AGG 0.571931 8.2:+59567432 None:intergenic
GTTGCTCATTGCACAAGAGA+AGG 0.578267 8.2:+59566784 None:intergenic
GAGTGAAGCCCAAGCAAAGG+TGG 0.584171 8.2:+59565966 None:intergenic
AACTGCCATCACAAAAGTCA+TGG 0.584413 8.2:+59566751 None:intergenic
ATTATATAAAGGTCCTATTG+TGG 0.588030 8.2:-59566097 MS.gene016512:CDS
ACTAAGTCTTACTTCACTTG+TGG 0.588891 8.2:-59565752 MS.gene016512:CDS
CAACAATGATCATCATAAGT+GGG 0.593912 8.2:+59565147 None:intergenic
ACACATGAAACAACAACCAC+AGG 0.596729 8.2:-59566036 MS.gene016512:CDS
CAACCAATCCTCCATAGAGA+AGG 0.600707 8.2:+59565676 None:intergenic
CAGAGTAAATCTGTTCTGCA+AGG 0.604588 8.2:+59565105 None:intergenic
TGTTCTATGGGGAAAGCACA+AGG 0.606487 8.2:-59564869 MS.gene016512:CDS
TACATAGTATGCCAAGCTTG+AGG 0.608423 8.2:+59565220 None:intergenic
AAAGAGTGAAGCCCAAGCAA+AGG 0.613193 8.2:+59565963 None:intergenic
GGTTTATATTCTGTTCTATG+GGG 0.615502 8.2:-59564880 MS.gene016512:CDS
TAGAAGCAGTTGCAAAAGCG+TGG 0.617111 8.2:+59567308 None:intergenic
ATAAAGGGTGCTCAAATGAG+TGG 0.625024 8.2:-59564808 MS.gene016512:CDS
AGATAAACATAAAGCAAGTG+AGG 0.626481 8.2:-59566176 MS.gene016512:CDS
AGCATGATCCTTCTCTATGG+AGG 0.629127 8.2:-59565684 MS.gene016512:CDS
GCAGAACAGATTTACTCTGG+AGG 0.643564 8.2:-59565101 MS.gene016512:CDS
ACTAAGGTTTCTCTCAACCA+AGG 0.665839 8.2:-59567361 MS.gene016512:CDS
GACACAGATCAAGTAAAACA+TGG 0.688084 8.2:-59564763 MS.gene016512:CDS
GCTTGGCATACTATGTACAA+GGG 0.751986 8.2:-59565214 MS.gene016512:CDS
AAGCGTGGCGATAAACGACG+AGG 0.774739 8.2:+59567323 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGAGATTATTAATTAAT+TGG + chr8.2:59565552-59565571 None:intergenic 10.0%
!!! CATCATTAATTAATTATTTT+TGG - chr8.2:59565817-59565836 MS.gene016512:intron 10.0%
!!! TTTTGTTTTTAAATATGAAA+AGG - chr8.2:59565920-59565939 MS.gene016512:intron 10.0%
!!! TTTTTTATTATCTTTGAAAA+GGG - chr8.2:59565113-59565132 MS.gene016512:CDS 10.0%
!! AATAGTGAAGTAAAATAAAA+AGG - chr8.2:59565716-59565735 MS.gene016512:CDS 15.0%
!! ATAGTGAAGTAAAATAAAAA+GGG - chr8.2:59565717-59565736 MS.gene016512:CDS 15.0%
!! TTCAAAAAATTGTCAAAAAA+TGG + chr8.2:59566727-59566746 None:intergenic 15.0%
!!! AGATAAAAACATTTTTTTAG+AGG + chr8.2:59566534-59566553 None:intergenic 15.0%
!!! CAAAATTCAGATTATTTTAA+GGG - chr8.2:59565414-59565433 MS.gene016512:intron 15.0%
!!! GTTTTTTATTATCTTTGAAA+AGG - chr8.2:59565112-59565131 MS.gene016512:CDS 15.0%
!!! TTTTGTGCAAATTATTAATT+GGG - chr8.2:59566315-59566334 MS.gene016512:intron 15.0%
!!! TTTTTGTGCAAATTATTAAT+TGG - chr8.2:59566314-59566333 MS.gene016512:intron 15.0%
!! AATTAATATGCTAACTCTTA+TGG - chr8.2:59564913-59564932 MS.gene016512:intron 20.0%
!! AGACAATATTATGTAGAAAA+TGG - chr8.2:59565451-59565470 MS.gene016512:intron 20.0%
!! ATCAAAATTTCTATTATGCT+GGG - chr8.2:59565300-59565319 MS.gene016512:intron 20.0%
!! ATGCTAATGACATTATATAA+AGG - chr8.2:59566018-59566037 MS.gene016512:CDS 20.0%
!! TGAAAATTTGCAAGAAAATT+CGG + chr8.2:59564977-59564996 None:intergenic 20.0%
!! TGACAAAATTTAATACAAGT+TGG + chr8.2:59567134-59567153 None:intergenic 20.0%
!! TTACTATTGTAATTCTTAGA+AGG - chr8.2:59566837-59566856 MS.gene016512:CDS 20.0%
!! TTGATTGATCAATAAATTAC+AGG - chr8.2:59565267-59565286 MS.gene016512:intron 20.0%
!!! AAACATGTAGTTTTTAGATT+TGG + chr8.2:59565096-59565115 None:intergenic 20.0%
!!! AAATTTTGTCATCATTCAAA+TGG - chr8.2:59567143-59567162 MS.gene016512:CDS 20.0%
!!! CCAAAATTCAGATTATTTTA+AGG - chr8.2:59565413-59565432 MS.gene016512:intron 20.0%
!!! CCTTAAAATAATCTGAATTT+TGG + chr8.2:59565416-59565435 None:intergenic 20.0%
!!! CTAACTAAAGAATTTGATTT+TGG - chr8.2:59567180-59567199 MS.gene016512:intron 20.0%
!!! GTTTTTAAATATGAAAAGGA+TGG - chr8.2:59565924-59565943 MS.gene016512:intron 20.0%
! AAAATTCGGAATGTTATCTT+AGG + chr8.2:59564963-59564982 None:intergenic 25.0%
! AGGTTTATATTCTGTTCTAT+GGG - chr8.2:59567245-59567264 MS.gene016512:intron 25.0%
! ATTATATAAAGGTCCTATTG+TGG - chr8.2:59566029-59566048 MS.gene016512:CDS 25.0%
! ATTATGTAGAAAATGGAAGA+AGG - chr8.2:59565458-59565477 MS.gene016512:intron 25.0%
! GATCAAAATTTCTATTATGC+TGG - chr8.2:59565299-59565318 MS.gene016512:intron 25.0%
! GTGACTGAAAAGTTAATATA+TGG - chr8.2:59565165-59565184 MS.gene016512:CDS 25.0%
! TAGGTTTATATTCTGTTCTA+TGG - chr8.2:59567244-59567263 MS.gene016512:intron 25.0%
! TGACTACTAAAAAGAACTTA+TGG + chr8.2:59565858-59565877 None:intergenic 25.0%
! TGCAAATTATTAATTGGGTT+AGG - chr8.2:59566320-59566339 MS.gene016512:intron 25.0%
! TTAGAGGTAAGTTAAAATCA+TGG + chr8.2:59566518-59566537 None:intergenic 25.0%
!! ATTATTCATGCGATATTTTG+TGG + chr8.2:59565192-59565211 None:intergenic 25.0%
!!! AAAGGAATTTGATTTTTCCA+TGG + chr8.2:59564679-59564698 None:intergenic 25.0%
!!! AATTTGATTTTGGACTATGT+GGG - chr8.2:59567190-59567209 MS.gene016512:intron 25.0%
!!! ATTTTGAGGATGTCTATTTT+TGG + chr8.2:59566067-59566086 None:intergenic 25.0%
!!! TAGAAATTTTGATCAATCAC+TGG + chr8.2:59565293-59565312 None:intergenic 25.0%
!!! TTGTGCAGTTTTATAATTTG+TGG - chr8.2:59565143-59565162 MS.gene016512:CDS 25.0%
AGATAAACATAAAGCAAGTG+AGG - chr8.2:59565950-59565969 MS.gene016512:intron 30.0%
ATGATCATTGTTGCAATCAT+GGG - chr8.2:59566989-59567008 MS.gene016512:intron 30.0%
ATGCTTATTGCAAATGAAGA+AGG + chr8.2:59567414-59567433 None:intergenic 30.0%
ATGTCAATACCTATATTCGA+GGG - chr8.2:59566796-59566815 MS.gene016512:CDS 30.0%
CAACAATGATCATCATAAGT+GGG + chr8.2:59566982-59567001 None:intergenic 30.0%
CATTTGCATTTATGTTTGAG+AGG - chr8.2:59564847-59564866 MS.gene016512:CDS 30.0%
CGGATTAAGAATGAATTTCA+CGG + chr8.2:59565745-59565764 None:intergenic 30.0%
CTCTCAAACATAAATGCAAA+TGG + chr8.2:59564849-59564868 None:intergenic 30.0%
GATATTCCTTTGCCAATAAA+GGG - chr8.2:59567303-59567322 MS.gene016512:CDS 30.0%
GCTATGATATGCTTACAATT+TGG - chr8.2:59564720-59564739 MS.gene016512:CDS 30.0%
GGTTTATATTCTGTTCTATG+GGG - chr8.2:59567246-59567265 MS.gene016512:intron 30.0%
GTAATGTTTCATGTTCTCAA+AGG + chr8.2:59564697-59564716 None:intergenic 30.0%
TCTTATGGTTTCACATTTGT+AGG - chr8.2:59564928-59564947 MS.gene016512:intron 30.0%
TGATATTCCTTTGCCAATAA+AGG - chr8.2:59567302-59567321 MS.gene016512:CDS 30.0%
TGGTATGAACATTATCACTA+AGG - chr8.2:59564749-59564768 MS.gene016512:CDS 30.0%
! CTGAAAGAGATTGGATTTTA+GGG - chr8.2:59566118-59566137 MS.gene016512:CDS 30.0%
! GTTTCATGTGTTTCATTTTG+AGG + chr8.2:59566081-59566100 None:intergenic 30.0%
! TCTGAAAGAGATTGGATTTT+AGG - chr8.2:59566117-59566136 MS.gene016512:CDS 30.0%
!! ATTTTAAGGGTGTGAATGTT+TGG - chr8.2:59565427-59565446 MS.gene016512:intron 30.0%
!! GAATTTGATTTTGGACTATG+TGG - chr8.2:59567189-59567208 MS.gene016512:intron 30.0%
!! GCATTCTTACTCTGTTATTT+TGG - chr8.2:59566768-59566787 MS.gene016512:CDS 30.0%
!! TTCTAGCGATGAAGTTTTAA+AGG + chr8.2:59565633-59565652 None:intergenic 30.0%
AATCTGTTCTGCAAGGATAA+AGG + chr8.2:59567017-59567036 None:intergenic 35.0%
ACTAAGTCTTACTTCACTTG+TGG - chr8.2:59566374-59566393 MS.gene016512:intron 35.0%
CATGTCAATACCTATATTCG+AGG - chr8.2:59566795-59566814 MS.gene016512:CDS 35.0%
GACACAGATCAAGTAAAACA+TGG - chr8.2:59567363-59567382 MS.gene016512:CDS 35.0%
GATGATCATTGTTGCAATCA+TGG - chr8.2:59566988-59567007 MS.gene016512:intron 35.0%
GCAACAATGATCATCATAAG+TGG + chr8.2:59566983-59567002 None:intergenic 35.0%
GGAGCTATCTTGATTGTTAT+AGG - chr8.2:59567225-59567244 MS.gene016512:intron 35.0%
TGGTTTCACATTTGTAGGAA+AGG - chr8.2:59564933-59564952 MS.gene016512:intron 35.0%
TTAGTAGTAAGCTCTCTAGT+AGG + chr8.2:59567438-59567457 None:intergenic 35.0%
TTCGGAATGTTATCTTAGGT+TGG + chr8.2:59564959-59564978 None:intergenic 35.0%
TTGTTCCCAATATCTTTGCT+TGG + chr8.2:59565978-59565997 None:intergenic 35.0%
! CTTCTTGCTAGCTTAATTCA+CGG - chr8.2:59565021-59565040 MS.gene016512:intron 35.0%
!! ATTGGGAACAATTTTGACAG+TGG - chr8.2:59565987-59566006 MS.gene016512:CDS 35.0%
!! ATTTTCATCCTAGCTCTTCT+TGG - chr8.2:59564990-59565009 MS.gene016512:intron 35.0%
!! CTTTTAAGTCCCTCGAATAT+AGG + chr8.2:59566808-59566827 None:intergenic 35.0%
!! TTTTCATCCTAGCTCTTCTT+GGG - chr8.2:59564991-59565010 MS.gene016512:intron 35.0%
!!! AGCTATTGCTGTTACTTTTG+TGG - chr8.2:59566416-59566435 MS.gene016512:intron 35.0%
AACTGCCATCACAAAAGTCA+TGG + chr8.2:59565378-59565397 None:intergenic 40.0%
ACACATGAAACAACAACCAC+AGG - chr8.2:59566090-59566109 MS.gene016512:CDS 40.0%
ACTAAGGTTTCTCTCAACCA+AGG - chr8.2:59564765-59564784 MS.gene016512:CDS 40.0%
ACTTCACTTGTGGTCTTCAT+TGG - chr8.2:59566384-59566403 MS.gene016512:intron 40.0%
AGCTTGGCATACTATGTACA+AGG - chr8.2:59566911-59566930 MS.gene016512:intron 40.0%
AGGTGCCAAGCAAAGATATT+GGG - chr8.2:59565970-59565989 MS.gene016512:CDS 40.0%
ATCTCTTTCAGAAGATCCTG+TGG + chr8.2:59566109-59566128 None:intergenic 40.0%
ATGGAAGATCCTTACAGCAT+AGG + chr8.2:59566499-59566518 None:intergenic 40.0%
CAGAACAGATTTACTCTGGA+GGG - chr8.2:59567026-59567045 MS.gene016512:intron 40.0%
CAGAGTAAATCTGTTCTGCA+AGG + chr8.2:59567024-59567043 None:intergenic 40.0%
CTCATTTGAGCACCCTTTAT+TGG + chr8.2:59567318-59567337 None:intergenic 40.0%
CTCGTCGCTAAATTTAGTGA+CGG + chr8.2:59565765-59565784 None:intergenic 40.0%
CTTGCAGAACAGATTTACTC+TGG - chr8.2:59567022-59567041 MS.gene016512:intron 40.0%
GCTCAAATGAGTGGAAATTC+AGG - chr8.2:59567327-59567346 MS.gene016512:CDS 40.0%
GCTTGGCATACTATGTACAA+GGG - chr8.2:59566912-59566931 MS.gene016512:intron 40.0%
TAAAGGTCCTATTGTGGAGA+TGG - chr8.2:59566035-59566054 MS.gene016512:CDS 40.0%
TACATAGTATGCCAAGCTTG+AGG + chr8.2:59566909-59566928 None:intergenic 40.0%
TATCATTGCCACCTTTGCTT+GGG - chr8.2:59566152-59566171 MS.gene016512:CDS 40.0%
TCCTATTGTGGAGATGGTAT+GGG - chr8.2:59566041-59566060 MS.gene016512:CDS 40.0%
TGCTTACAATTTGGCTATGC+TGG - chr8.2:59564729-59564748 MS.gene016512:CDS 40.0%
TTATCATTGCCACCTTTGCT+TGG - chr8.2:59566151-59566170 MS.gene016512:CDS 40.0%
! ATGTACAAGGGCTAGTGATT+AGG - chr8.2:59566924-59566943 MS.gene016512:intron 40.0%
! CAGGATCTTCTGAAAGAGAT+TGG - chr8.2:59566109-59566128 MS.gene016512:CDS 40.0%
! TTGCTAGCTTAATTCACGGT+TGG - chr8.2:59565025-59565044 MS.gene016512:intron 40.0%
!! ATAAAGGGTGCTCAAATGAG+TGG - chr8.2:59567318-59567337 MS.gene016512:CDS 40.0%
!! GATCATCATAAGTGGGCTAA+AGG + chr8.2:59566975-59566994 None:intergenic 40.0%
!! TTCTCTATGGAGGATTGGTT+GGG - chr8.2:59566452-59566471 MS.gene016512:intron 40.0%
!! TTGTGATGGCAGTTTTATGC+AGG - chr8.2:59565384-59565403 MS.gene016512:intron 40.0%
AAAGAGTGAAGCCCAAGCAA+AGG + chr8.2:59566166-59566185 None:intergenic 45.0%
AGACTAACCCAAGAAGAGCT+AGG + chr8.2:59565001-59565020 None:intergenic 45.0%
AGCATGATCCTTCTCTATGG+AGG - chr8.2:59566442-59566461 MS.gene016512:intron 45.0%
CAACCAATCCTCCATAGAGA+AGG + chr8.2:59566453-59566472 None:intergenic 45.0%
CTAAAGGCAGTTGCAAAGAC+AGG + chr8.2:59566959-59566978 None:intergenic 45.0%
CTCATTGCACAAGAGAAGGT+TGG + chr8.2:59565341-59565360 None:intergenic 45.0%
CTGAGCATGATCCTTCTCTA+TGG - chr8.2:59566439-59566458 MS.gene016512:intron 45.0%
GATAAACGACGAGGACATAG+TGG + chr8.2:59564797-59564816 None:intergenic 45.0%
GATCCTTCTCTATGGAGGAT+TGG - chr8.2:59566447-59566466 MS.gene016512:intron 45.0%
GCAGAACAGATTTACTCTGG+AGG - chr8.2:59567025-59567044 MS.gene016512:intron 45.0%
GTCCTATTGTGGAGATGGTA+TGG - chr8.2:59566040-59566059 MS.gene016512:CDS 45.0%
GTTGCTCATTGCACAAGAGA+AGG + chr8.2:59565345-59565364 None:intergenic 45.0%
TAGAAGCAGTTGCAAAAGCG+TGG + chr8.2:59564821-59564840 None:intergenic 45.0%
TGAGCACCCTTTATTGGCAA+AGG + chr8.2:59567312-59567331 None:intergenic 45.0%
TTGCTTCTGCCTATGCTGTA+AGG - chr8.2:59566487-59566506 MS.gene016512:intron 45.0%
! CTTCTCTATGGAGGATTGGT+TGG - chr8.2:59566451-59566470 MS.gene016512:intron 45.0%
! GAGGTGCCAAGCAAAGATAT+TGG - chr8.2:59565969-59565988 MS.gene016512:CDS 45.0%
! GGGCTAGTGATTAGGAAGAA+AGG - chr8.2:59566932-59566951 MS.gene016512:intron 45.0%
! TCCAGCCATGACTTTTGTGA+TGG - chr8.2:59565370-59565389 MS.gene016512:intron 45.0%
! TGTTCTATGGGGAAAGCACA+AGG - chr8.2:59567257-59567276 MS.gene016512:intron 45.0%
!! GGAACAATTTTGACAGTGGC+TGG - chr8.2:59565991-59566010 MS.gene016512:CDS 45.0%
!!! AATTTATTTTATTTTTGTTA+GGG - chr8.2:59566875-59566894 MS.gene016512:intron 5.0%
!!! TAATTTATTTTATTTTTGTT+AGG - chr8.2:59566874-59566893 MS.gene016512:intron 5.0%
ACTATGTGGGTGCAGTGTGA+TGG - chr8.2:59567203-59567222 MS.gene016512:intron 50.0%
CTATGTGGGTGCAGTGTGAT+GGG - chr8.2:59567204-59567223 MS.gene016512:intron 50.0%
GCCATCACAAAAGTCATGGC+TGG + chr8.2:59565374-59565393 None:intergenic 50.0%
GCCCATACCATCTCCACAAT+AGG + chr8.2:59566045-59566064 None:intergenic 50.0%
GGACATAGTGGCTCATTCCT+TGG + chr8.2:59564785-59564804 None:intergenic 50.0%
GGGAATTGTGACCTCAAGCT+TGG - chr8.2:59566895-59566914 MS.gene016512:intron 50.0%
AAGCGTGGCGATAAACGACG+AGG + chr8.2:59564806-59564825 None:intergenic 55.0%
GAGTGAAGCCCAAGCAAAGG+TGG + chr8.2:59566163-59566182 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 59564672 59567476 59564672 ID=MS.gene016512
chr8.2 mRNA 59564672 59567476 59564672 ID=MS.gene016512.t1;Parent=MS.gene016512
chr8.2 exon 59567280 59567476 59567280 ID=MS.gene016512.t1.exon1;Parent=MS.gene016512.t1
chr8.2 CDS 59567280 59567476 59567280 ID=cds.MS.gene016512.t1;Parent=MS.gene016512.t1
chr8.2 exon 59567136 59567198 59567136 ID=MS.gene016512.t1.exon2;Parent=MS.gene016512.t1
chr8.2 CDS 59567136 59567198 59567136 ID=cds.MS.gene016512.t1;Parent=MS.gene016512.t1
chr8.2 exon 59566743 59566859 59566743 ID=MS.gene016512.t1.exon3;Parent=MS.gene016512.t1
chr8.2 CDS 59566743 59566859 59566743 ID=cds.MS.gene016512.t1;Parent=MS.gene016512.t1
chr8.2 exon 59565954 59566206 59565954 ID=MS.gene016512.t1.exon4;Parent=MS.gene016512.t1
chr8.2 CDS 59565954 59566206 59565954 ID=cds.MS.gene016512.t1;Parent=MS.gene016512.t1
chr8.2 exon 59565645 59565806 59565645 ID=MS.gene016512.t1.exon5;Parent=MS.gene016512.t1
chr8.2 CDS 59565645 59565806 59565645 ID=cds.MS.gene016512.t1;Parent=MS.gene016512.t1
chr8.2 exon 59565101 59565252 59565101 ID=MS.gene016512.t1.exon6;Parent=MS.gene016512.t1
chr8.2 CDS 59565101 59565252 59565101 ID=cds.MS.gene016512.t1;Parent=MS.gene016512.t1
chr8.2 exon 59564672 59564930 59564672 ID=MS.gene016512.t1.exon7;Parent=MS.gene016512.t1
chr8.2 CDS 59564672 59564930 59564672 ID=cds.MS.gene016512.t1;Parent=MS.gene016512.t1
Gene Sequence

>MS.gene016512

ATGGCCATGGAAAAATCAAATTCCTTTGAGAACATGAAACATTACACTGCTATGATATGCTTACAATTTGGCTATGCTGGTATGAACATTATCACTAAGGTTTCTCTCAACCAAGGAATGAGCCACTATGTCCTCGTCGTTTATCGCCACGCTTTTGCAACTGCTTCTATAGCTCCATTTGCATTTATGTTTGAGAGGTTTGTATAAACATGTTTTAACACAAAGTCACATTTTTATTGCAAATTAATATGCTAACTCTTATGGTTTCACATTTGTAGGAAAGGCCAACCTAAGATAACATTCCGAATTTTCTTGCAAATTTTCATCCTAGCTCTTCTTGGGTTAGTCTCTTCTTGCTAGCTTAATTCACGGTTGGATAAACTTTACATTTTATATATTCTATACACAATTTTCAGTTCTTCCAAATCTAAAAACTACATGTTTTTTATTATCTTTGAAAAGGGACTATGATTGTGCAGTTTTATAATTTGTGGTGACTGAAAAGTTAATATATGGACCACAAAATATCGCATGAATAATGAAAGTGTAAAGTTAAATTAAACTTGCATGCATATACTAAATGTGATTATTGTATTTGATTGATCAATAAATTACAGGCCAGTGATTGATCAAAATTTCTATTATGCTGGGTTGAAGCTCACATCTCCAACCTTCTCTTGTGCAATGAGCAACGTGCTTCCAGCCATGACTTTTGTGATGGCAGTTTTATGCAGGTAATAACCAAAATTCAGATTATTTTAAGGGTGTGAATGTTTGGAAGACAATATTATGTAGAAAATGGAAGAAGGAATGCATATTTTATTTTTTATTTCAAATCAAGATTATGTAATTCAATCAAGAAATTTTCAGCATGAAACCAATTAATTAATAATCTCTTATTTTATATACTACGTAAATCATCATAATTTAAAAATAGAAAACTTAACATCTCGTATTTCCTTTAAAACTTCATCGCTAGAAAAAATAAATAGCGACATAAACTAGAGAAAGAAAATATGAATTTGCTAGTAAAAAAAAAATCAAAATAGTGAAGTAAAATAAAAAGGGAGCCGTGAAATTCATTCTTAATCCGTCACTAAATTTAGCGACGAGACAATTTGACAAGAATTTTATTTTTTTCTCAACATCATTAATTAATTATTTTTGGTGTAGTAAATTGTTACCATAAGTTCTTTTTAGTAGTCAATTTACACTAAAGTTTATTTCTTCTACTATAGTATTGCTCATTTTTGTTTTTAAATATGAAAAGGATGGAGAAGATAAACATAAAGCAAGTGAGGTGCCAAGCAAAGATATTGGGAACAATTTTGACAGTGGCTGGTGCAATGCTAATGACATTATATAAAGGTCCTATTGTGGAGATGGTATGGGCCAAAAATAGACATCCTCAAAATGAAACACATGAAACAACAACCACAGGATCTTCTGAAAGAGATTGGATTTTAGGGTGCACTTTTCTTATCATTGCCACCTTTGCTTGGGCTTCACTCTTTGTTTTGCAAGTAAGACATTATGTTTAAAAAGATATAAAGTATATAGTAAAAAAAAAATATGCACTAACTTTAATTATCATACTTTTTTTGATTGAAAAAGTGTATGTTTCATTAATTATAACATATTTTTTTTGTGCAAATTATTAATTGGGTTAGGCAAAAGTTATAGAGACGTACAAGCATCATCAACTAAGTCTTACTTCACTTGTGGTCTTCATTGGTACTCTTCAAGCTATTGCTGTTACTTTTGTGGCTGAGCATGATCCTTCTCTATGGAGGATTGGTTGGGACATGAGTTTACTTGCTTCTGCCTATGCTGTAAGGATCTTCCATGATTTTAACTTACCTCTAAAAAAATGTTTTTATCTTTAATAATACAATATTTTAATTTTAATTCACAATGTCAAAAGTTTTATGTATGCATGAAGTTAAAAGTAATTATAATAAAAGTCAAATTATTTTTACAATTCGACAGTTAAAACTTATTGACTATGCAAGACAATTTTGTACGTATGATTTAAGAGAAATAATACTTGTACCATTTTTTGACAATTTTTTGAACAACTCTCGCATGTGTTTATTGCATTCTTACTCTGTTATTTTGGTTTACATGTCAATACCTATATTCGAGGGACTTAAAAGATATTTAAATTACTATTGTAATTCTTAGAAGGAAAAAAAAATCTAATAATTTATTTTATTTTTGTTAGGGAATTGTGACCTCAAGCTTGGCATACTATGTACAAGGGCTAGTGATTAGGAAGAAAGGACCTGTCTTTGCAACTGCCTTTAGCCCACTTATGATGATCATTGTTGCAATCATGGGATCCTTTATCCTTGCAGAACAGATTTACTCTGGAGGGTAAATTTTCATTATATTATATAAAATTTATTACGAATTTTTTAAATCAAAAATAAAATTAAAATGTTTTCTTCAATATTATTCCAACTTGTATTAAATTTTGTCATCATTCAAATGGATAAAGCTATGTGACTAACTAAAGAATTTGATTTTGGACTATGTGGGTGCAGTGTGATGGGAGCTATCTTGATTGTTATAGGTTTATATTCTGTTCTATGGGGAAAGCACAAGGAAGAAATAGAGAGAAAAGTAGATGATATTCCTTTGCCAATAAAGGGTGCTCAAATGAGTGGAAATTCAGGTCTAGTGATTGATGACACAGATCAAGTAAAACATGGTCAAGTTGAAGATACTAACAACATGCCTTCTTCATTTGCAATAAGCATTCCTACTAGAGAGCTTACTACTAATAATGTTAACCAGCAATAA

Protein sequence

>MS.gene016512.t1

MAMEKSNSFENMKHYTAMICLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATASIAPFAFMFERKGQPKITFRIFLQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNVLPAMTFVMAVLCRMEKINIKQVRCQAKILGTILTVAGAMLMTLYKGPIVEMVWAKNRHPQNETHETTTTGSSERDWILGCTFLIIATFAWASLFVLQAKVIETYKHHQLSLTSLVVFIGTLQAIAVTFVAEHDPSLWRIGWDMSLLASAYAGIVTSSLAYYVQGLVIRKKGPVFATAFSPLMMIIVAIMGSFILAEQIYSGGVMGAILIVIGLYSVLWGKHKEEIERKVDDIPLPIKGAQMSGNSGLVIDDTDQVKHGQVEDTNNMPSSFAISIPTRELTTNNVNQQ