Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016512.t1 | XP_003628011.1 | 97.2 | 400 | 6 | 1 | 1 | 400 | 1 | 395 | 6.80E-214 | 753.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016512.t1 | Q9FL41 | 64.7 | 399 | 126 | 5 | 1 | 391 | 1 | 392 | 9.9e-137 | 488.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016512.t1 | G7LID0 | 97.2 | 400 | 6 | 1 | 1 | 400 | 1 | 395 | 4.9e-214 | 753.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene83392 | MS.gene016512 | PPI |
MS.gene056576 | MS.gene016512 | PPI |
MS.gene056577 | MS.gene016512 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016512.t1 | MTR_8g041390 | 97.250 | 400 | 6 | 1 | 1 | 400 | 1 | 395 | 0.0 | 801 |
MS.gene016512.t1 | MTR_3g012420 | 69.430 | 386 | 106 | 4 | 1 | 377 | 1 | 383 | 0.0 | 542 |
MS.gene016512.t1 | MTR_1g030580 | 46.174 | 379 | 195 | 3 | 6 | 380 | 9 | 382 | 1.48e-115 | 342 |
MS.gene016512.t1 | MTR_3g072500 | 44.730 | 389 | 199 | 6 | 3 | 381 | 10 | 392 | 8.23e-114 | 338 |
MS.gene016512.t1 | MTR_1g068630 | 48.955 | 335 | 163 | 3 | 3 | 336 | 5 | 332 | 1.26e-110 | 329 |
MS.gene016512.t1 | MTR_7g100050 | 46.316 | 380 | 191 | 5 | 1 | 378 | 1 | 369 | 1.71e-110 | 329 |
MS.gene016512.t1 | MTR_3g072530 | 41.854 | 356 | 197 | 4 | 3 | 353 | 1 | 351 | 1.47e-104 | 313 |
MS.gene016512.t1 | MTR_3g072560 | 47.059 | 340 | 170 | 4 | 9 | 348 | 14 | 343 | 1.34e-103 | 312 |
MS.gene016512.t1 | MTR_1g030600 | 44.152 | 342 | 187 | 3 | 9 | 349 | 14 | 352 | 6.36e-99 | 300 |
MS.gene016512.t1 | MTR_3g072520 | 46.064 | 343 | 180 | 5 | 10 | 350 | 6 | 345 | 1.73e-93 | 286 |
MS.gene016512.t1 | MTR_0096s0100 | 42.515 | 334 | 183 | 4 | 13 | 344 | 18 | 344 | 3.37e-91 | 279 |
MS.gene016512.t1 | MTR_1g074120 | 39.645 | 338 | 195 | 4 | 9 | 344 | 12 | 342 | 7.37e-82 | 255 |
MS.gene016512.t1 | MTR_1g074070 | 39.583 | 336 | 192 | 4 | 9 | 343 | 12 | 337 | 5.08e-81 | 253 |
MS.gene016512.t1 | MTR_1g051120 | 39.286 | 336 | 195 | 4 | 9 | 343 | 12 | 339 | 6.10e-81 | 253 |
MS.gene016512.t1 | MTR_1g074160 | 38.329 | 347 | 203 | 5 | 3 | 345 | 1 | 340 | 1.30e-79 | 249 |
MS.gene016512.t1 | MTR_3g112480 | 38.872 | 337 | 196 | 2 | 10 | 337 | 17 | 352 | 2.20e-79 | 250 |
MS.gene016512.t1 | MTR_2g007990 | 40.116 | 344 | 195 | 5 | 7 | 346 | 9 | 345 | 5.55e-79 | 249 |
MS.gene016512.t1 | MTR_2g007960 | 35.492 | 386 | 227 | 9 | 7 | 375 | 6 | 386 | 8.43e-78 | 246 |
MS.gene016512.t1 | MTR_3g072500 | 42.857 | 294 | 152 | 6 | 98 | 381 | 2 | 289 | 1.80e-77 | 241 |
MS.gene016512.t1 | MTR_1g074020 | 37.430 | 358 | 210 | 5 | 3 | 357 | 1 | 347 | 2.77e-77 | 243 |
MS.gene016512.t1 | MTR_7g111830 | 39.091 | 330 | 197 | 2 | 18 | 344 | 12 | 340 | 1.98e-76 | 242 |
MS.gene016512.t1 | MTR_6g036450 | 36.202 | 337 | 208 | 4 | 10 | 344 | 13 | 344 | 2.21e-76 | 241 |
MS.gene016512.t1 | MTR_6g081840 | 39.557 | 316 | 190 | 1 | 22 | 337 | 19 | 333 | 1.57e-75 | 239 |
MS.gene016512.t1 | MTR_1g073990 | 38.719 | 359 | 197 | 8 | 9 | 360 | 12 | 354 | 1.81e-75 | 238 |
MS.gene016512.t1 | MTR_1g023180 | 37.391 | 345 | 195 | 3 | 10 | 337 | 18 | 358 | 3.09e-75 | 239 |
MS.gene016512.t1 | MTR_2g027030 | 38.415 | 328 | 197 | 4 | 10 | 336 | 9 | 332 | 4.29e-75 | 238 |
MS.gene016512.t1 | MTR_3g095460 | 36.070 | 341 | 206 | 4 | 10 | 345 | 2 | 335 | 2.37e-74 | 235 |
MS.gene016512.t1 | MTR_2g007970 | 38.000 | 350 | 214 | 3 | 18 | 367 | 17 | 363 | 3.88e-74 | 236 |
MS.gene016512.t1 | MTR_3g072500 | 44.275 | 262 | 143 | 2 | 3 | 264 | 10 | 268 | 5.28e-74 | 232 |
MS.gene016512.t1 | MTR_4g094340 | 37.861 | 346 | 203 | 8 | 10 | 351 | 6 | 343 | 3.50e-73 | 233 |
MS.gene016512.t1 | MTR_4g094340 | 38.068 | 352 | 205 | 9 | 5 | 351 | 18 | 361 | 6.34e-73 | 233 |
MS.gene016512.t1 | MTR_8g006010 | 37.465 | 355 | 199 | 7 | 18 | 369 | 15 | 349 | 5.26e-72 | 230 |
MS.gene016512.t1 | MTR_2g007260 | 37.403 | 385 | 219 | 8 | 18 | 395 | 19 | 388 | 2.97e-71 | 229 |
MS.gene016512.t1 | MTR_2g016710 | 35.329 | 334 | 209 | 2 | 7 | 340 | 2 | 328 | 6.19e-71 | 227 |
MS.gene016512.t1 | MTR_4g094352 | 36.483 | 381 | 230 | 8 | 7 | 381 | 6 | 380 | 1.01e-70 | 227 |
MS.gene016512.t1 | MTR_3g095420 | 34.946 | 372 | 217 | 8 | 15 | 380 | 9 | 361 | 1.06e-70 | 226 |
MS.gene016512.t1 | MTR_4g094362 | 36.522 | 345 | 212 | 4 | 8 | 351 | 9 | 347 | 9.48e-70 | 224 |
MS.gene016512.t1 | MTR_2g102340 | 33.512 | 373 | 223 | 7 | 10 | 369 | 9 | 369 | 2.73e-67 | 218 |
MS.gene016512.t1 | MTR_4g094342 | 35.258 | 329 | 207 | 4 | 6 | 331 | 6 | 331 | 1.19e-66 | 216 |
MS.gene016512.t1 | MTR_8g006090 | 38.235 | 340 | 201 | 5 | 11 | 346 | 6 | 340 | 1.67e-66 | 215 |
MS.gene016512.t1 | MTR_2g065550 | 35.882 | 340 | 199 | 6 | 11 | 341 | 5 | 334 | 4.31e-66 | 215 |
MS.gene016512.t1 | MTR_1g070175 | 31.361 | 338 | 223 | 2 | 9 | 346 | 12 | 340 | 5.12e-66 | 214 |
MS.gene016512.t1 | MTR_1g114210 | 34.211 | 342 | 219 | 4 | 3 | 344 | 1 | 336 | 1.13e-65 | 213 |
MS.gene016512.t1 | MTR_5g021160 | 34.795 | 342 | 216 | 4 | 10 | 350 | 4 | 339 | 5.72e-65 | 211 |
MS.gene016512.t1 | MTR_4g094360 | 35.882 | 340 | 210 | 5 | 8 | 345 | 9 | 342 | 1.06e-64 | 212 |
MS.gene016512.t1 | MTR_1g038560 | 34.627 | 335 | 207 | 5 | 13 | 344 | 3 | 328 | 3.32e-64 | 209 |
MS.gene016512.t1 | MTR_3g095450 | 35.905 | 337 | 207 | 6 | 15 | 347 | 7 | 338 | 3.92e-64 | 209 |
MS.gene016512.t1 | MTR_1g030400 | 32.081 | 346 | 225 | 3 | 22 | 358 | 16 | 360 | 8.03e-64 | 209 |
MS.gene016512.t1 | MTR_8g006120 | 36.070 | 341 | 203 | 6 | 11 | 343 | 5 | 338 | 5.51e-63 | 207 |
MS.gene016512.t1 | MTR_3g072500 | 46.445 | 211 | 111 | 1 | 3 | 213 | 10 | 218 | 1.69e-62 | 201 |
MS.gene016512.t1 | MTR_3g112480 | 38.790 | 281 | 162 | 2 | 66 | 337 | 18 | 297 | 4.89e-62 | 203 |
MS.gene016512.t1 | MTR_3g072530 | 36.120 | 299 | 149 | 6 | 3 | 263 | 1 | 295 | 5.20e-62 | 202 |
MS.gene016512.t1 | MTR_4g106720 | 32.738 | 336 | 216 | 5 | 15 | 346 | 13 | 342 | 1.82e-61 | 202 |
MS.gene016512.t1 | MTR_8g092650 | 33.631 | 336 | 214 | 4 | 15 | 345 | 7 | 338 | 1.45e-60 | 200 |
MS.gene016512.t1 | MTR_2g016710 | 33.766 | 308 | 197 | 2 | 7 | 314 | 2 | 302 | 2.17e-59 | 196 |
MS.gene016512.t1 | MTR_3g095440 | 37.092 | 337 | 203 | 5 | 15 | 347 | 7 | 338 | 3.02e-58 | 194 |
MS.gene016512.t1 | MTR_5g034910 | 34.161 | 322 | 203 | 5 | 18 | 337 | 12 | 326 | 5.31e-58 | 193 |
MS.gene016512.t1 | MTR_1g014510 | 31.143 | 350 | 233 | 5 | 3 | 348 | 1 | 346 | 1.92e-57 | 194 |
MS.gene016512.t1 | MTR_4g129650 | 33.636 | 330 | 202 | 5 | 18 | 341 | 13 | 331 | 1.00e-56 | 190 |
MS.gene016512.t1 | MTR_4g094340 | 39.394 | 264 | 149 | 7 | 92 | 351 | 21 | 277 | 3.95e-56 | 186 |
MS.gene016512.t1 | MTR_8g006050 | 34.125 | 337 | 186 | 8 | 42 | 375 | 23 | 326 | 3.01e-55 | 186 |
MS.gene016512.t1 | MTR_8g006090 | 37.338 | 308 | 184 | 5 | 11 | 314 | 6 | 308 | 1.87e-54 | 182 |
MS.gene016512.t1 | MTR_3g090550 | 33.846 | 325 | 204 | 5 | 20 | 344 | 16 | 329 | 1.99e-54 | 184 |
MS.gene016512.t1 | MTR_5g034990 | 31.176 | 340 | 224 | 4 | 7 | 345 | 8 | 338 | 3.31e-54 | 183 |
MS.gene016512.t1 | MTR_0103s0090 | 33.628 | 339 | 211 | 9 | 9 | 343 | 7 | 335 | 4.39e-54 | 183 |
MS.gene016512.t1 | MTR_1g074160 | 37.358 | 265 | 156 | 4 | 3 | 264 | 1 | 258 | 5.17e-54 | 180 |
MS.gene016512.t1 | MTR_5g034980 | 31.212 | 330 | 206 | 6 | 16 | 337 | 10 | 326 | 3.63e-53 | 181 |
MS.gene016512.t1 | MTR_4g094360 | 33.871 | 310 | 199 | 4 | 7 | 314 | 8 | 313 | 4.98e-53 | 179 |
MS.gene016512.t1 | MTR_5g069040 | 28.219 | 365 | 241 | 4 | 3 | 347 | 1 | 364 | 8.65e-51 | 175 |
MS.gene016512.t1 | MTR_3g019050 | 28.446 | 341 | 233 | 3 | 3 | 336 | 1 | 337 | 5.51e-50 | 173 |
MS.gene016512.t1 | MTR_5g034930 | 32.424 | 330 | 212 | 6 | 18 | 344 | 11 | 332 | 6.07e-50 | 172 |
MS.gene016512.t1 | MTR_8g006090 | 38.403 | 263 | 157 | 3 | 84 | 346 | 3 | 260 | 1.69e-49 | 169 |
MS.gene016512.t1 | MTR_5g025340 | 32.456 | 342 | 212 | 5 | 10 | 337 | 7 | 343 | 2.80e-49 | 171 |
MS.gene016512.t1 | MTR_5g068790 | 26.425 | 386 | 273 | 4 | 3 | 379 | 1 | 384 | 1.25e-47 | 167 |
MS.gene016512.t1 | MTR_6g007760 | 31.746 | 315 | 208 | 5 | 3 | 316 | 1 | 309 | 3.44e-47 | 164 |
MS.gene016512.t1 | MTR_5g025290 | 30.994 | 342 | 217 | 6 | 10 | 337 | 8 | 344 | 6.00e-47 | 165 |
MS.gene016512.t1 | MTR_5g025290 | 30.994 | 342 | 217 | 6 | 10 | 337 | 36 | 372 | 6.09e-47 | 166 |
MS.gene016512.t1 | MTR_6g007743 | 30.769 | 325 | 205 | 6 | 33 | 347 | 32 | 346 | 1.17e-46 | 164 |
MS.gene016512.t1 | MTR_5g025370 | 30.792 | 341 | 221 | 3 | 10 | 337 | 7 | 345 | 9.23e-46 | 162 |
MS.gene016512.t1 | MTR_5g025400 | 31.858 | 339 | 216 | 3 | 12 | 337 | 10 | 346 | 9.52e-46 | 162 |
MS.gene016512.t1 | MTR_5g089390 | 29.907 | 321 | 213 | 4 | 17 | 336 | 18 | 327 | 1.30e-45 | 160 |
MS.gene016512.t1 | MTR_5g021160 | 33.588 | 262 | 167 | 4 | 90 | 350 | 1 | 256 | 4.13e-45 | 157 |
MS.gene016512.t1 | MTR_0103s0090 | 35.857 | 251 | 149 | 6 | 96 | 343 | 3 | 244 | 8.13e-45 | 156 |
MS.gene016512.t1 | MTR_5g034970 | 31.915 | 329 | 190 | 7 | 17 | 337 | 11 | 313 | 8.76e-45 | 158 |
MS.gene016512.t1 | MTR_4g094340 | 35.907 | 259 | 155 | 7 | 10 | 264 | 6 | 257 | 1.77e-44 | 155 |
MS.gene016512.t1 | MTR_4g094360 | 34.884 | 258 | 160 | 5 | 90 | 345 | 44 | 295 | 2.16e-44 | 157 |
MS.gene016512.t1 | MTR_5g025330 | 31.858 | 339 | 212 | 5 | 13 | 337 | 9 | 342 | 2.53e-44 | 162 |
MS.gene016512.t1 | MTR_4g094340 | 36.226 | 265 | 157 | 8 | 5 | 264 | 18 | 275 | 2.62e-44 | 155 |
MS.gene016512.t1 | MTR_6g007750 | 31.875 | 320 | 205 | 6 | 33 | 348 | 32 | 342 | 5.24e-44 | 157 |
MS.gene016512.t1 | MTR_5g021160 | 34.572 | 269 | 168 | 4 | 10 | 274 | 4 | 268 | 3.26e-43 | 152 |
MS.gene016512.t1 | MTR_1g051120 | 34.951 | 206 | 130 | 1 | 9 | 214 | 12 | 213 | 5.12e-43 | 150 |
MS.gene016512.t1 | MTR_8g092650 | 33.891 | 239 | 149 | 4 | 112 | 345 | 26 | 260 | 7.22e-43 | 151 |
MS.gene016512.t1 | MTR_1g051120 | 35.961 | 203 | 126 | 1 | 9 | 211 | 12 | 210 | 1.90e-42 | 150 |
MS.gene016512.t1 | MTR_6g007740 | 30.060 | 336 | 215 | 7 | 22 | 347 | 21 | 346 | 2.35e-42 | 155 |
MS.gene016512.t1 | MTR_6g007747 | 31.034 | 319 | 204 | 5 | 33 | 348 | 32 | 337 | 2.93e-42 | 152 |
MS.gene016512.t1 | MTR_1g052205 | 36.245 | 229 | 121 | 6 | 124 | 344 | 11 | 222 | 5.57e-42 | 148 |
MS.gene016512.t1 | MTR_3g112480 | 34.956 | 226 | 137 | 2 | 121 | 337 | 1 | 225 | 8.50e-41 | 145 |
MS.gene016512.t1 | MTR_8g006090 | 38.346 | 266 | 152 | 6 | 11 | 272 | 6 | 263 | 7.86e-40 | 144 |
MS.gene016512.t1 | MTR_3g095440 | 34.646 | 254 | 159 | 4 | 15 | 264 | 7 | 257 | 2.26e-39 | 142 |
MS.gene016512.t1 | MTR_8g072350 | 28.024 | 339 | 225 | 5 | 13 | 337 | 9 | 342 | 2.76e-39 | 144 |
MS.gene016512.t1 | MTR_2g102340 | 31.298 | 262 | 161 | 5 | 10 | 264 | 35 | 284 | 1.29e-38 | 141 |
MS.gene016512.t1 | MTR_4g129650 | 33.191 | 235 | 143 | 4 | 110 | 341 | 1 | 224 | 1.64e-38 | 139 |
MS.gene016512.t1 | MTR_6g007753 | 30.690 | 290 | 188 | 5 | 63 | 348 | 343 | 623 | 1.86e-37 | 144 |
MS.gene016512.t1 | MTR_6g007753 | 30.493 | 223 | 147 | 3 | 126 | 348 | 85 | 299 | 2.59e-26 | 111 |
MS.gene016512.t1 | MTR_6g007757 | 30.091 | 329 | 215 | 6 | 18 | 342 | 17 | 334 | 5.65e-37 | 138 |
MS.gene016512.t1 | MTR_4g100840 | 28.333 | 360 | 225 | 11 | 1 | 343 | 2 | 345 | 1.93e-34 | 131 |
MS.gene016512.t1 | MTR_8g076800 | 59.259 | 108 | 42 | 2 | 180 | 287 | 139 | 244 | 8.41e-34 | 127 |
MS.gene016512.t1 | MTR_4g094342 | 35.754 | 179 | 108 | 2 | 6 | 178 | 6 | 183 | 2.68e-32 | 122 |
MS.gene016512.t1 | MTR_5g034980 | 28.986 | 276 | 169 | 8 | 16 | 283 | 10 | 266 | 1.40e-31 | 122 |
MS.gene016512.t1 | MTR_4g094340 | 36.019 | 211 | 124 | 7 | 5 | 210 | 18 | 222 | 1.85e-30 | 117 |
MS.gene016512.t1 | MTR_5g012650 | 29.167 | 336 | 217 | 9 | 10 | 336 | 5 | 328 | 5.15e-30 | 119 |
MS.gene016512.t1 | MTR_6g007470 | 56.322 | 87 | 37 | 1 | 201 | 287 | 99 | 184 | 3.89e-26 | 105 |
MS.gene016512.t1 | MTR_1g068720 | 40.268 | 149 | 78 | 5 | 208 | 346 | 93 | 240 | 1.01e-25 | 104 |
MS.gene016512.t1 | MTR_1g068720 | 44.872 | 78 | 43 | 0 | 9 | 86 | 10 | 87 | 6.46e-15 | 74.3 |
MS.gene016512.t1 | MTR_1g014790 | 35.252 | 139 | 86 | 2 | 86 | 224 | 36 | 170 | 3.41e-24 | 99.4 |
MS.gene016512.t1 | MTR_8g006090 | 38.624 | 189 | 108 | 4 | 84 | 272 | 3 | 183 | 1.05e-23 | 98.6 |
MS.gene016512.t1 | MTR_6g007757 | 26.721 | 247 | 166 | 6 | 18 | 260 | 17 | 252 | 1.08e-22 | 97.1 |
MS.gene016512.t1 | MTR_4g094348 | 33.858 | 127 | 77 | 2 | 93 | 213 | 2 | 127 | 2.72e-17 | 79.3 |
MS.gene016512.t1 | MTR_3g093450 | 27.586 | 203 | 93 | 7 | 146 | 339 | 25 | 182 | 5.71e-12 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016512.t1 | AT5G07050 | 62.990 | 408 | 136 | 5 | 1 | 400 | 1 | 401 | 2.31e-180 | 508 |
MS.gene016512.t1 | AT2G40900 | 52.747 | 364 | 154 | 5 | 10 | 367 | 7 | 358 | 1.34e-138 | 401 |
MS.gene016512.t1 | AT3G56620 | 55.077 | 325 | 137 | 3 | 10 | 334 | 7 | 322 | 3.85e-128 | 374 |
MS.gene016512.t1 | AT1G21890 | 47.594 | 374 | 182 | 5 | 10 | 372 | 7 | 377 | 1.84e-116 | 345 |
MS.gene016512.t1 | AT2G39510 | 47.429 | 350 | 176 | 5 | 8 | 354 | 2 | 346 | 6.81e-113 | 335 |
MS.gene016512.t1 | AT2G37460 | 46.505 | 372 | 181 | 6 | 3 | 370 | 4 | 361 | 1.12e-111 | 332 |
MS.gene016512.t1 | AT1G44800 | 46.269 | 335 | 175 | 2 | 5 | 339 | 2 | 331 | 1.51e-110 | 329 |
MS.gene016512.t1 | AT4G08300 | 43.236 | 377 | 204 | 5 | 5 | 377 | 2 | 372 | 3.22e-107 | 320 |
MS.gene016512.t1 | AT4G08290 | 45.015 | 331 | 179 | 2 | 6 | 336 | 5 | 332 | 1.22e-104 | 314 |
MS.gene016512.t1 | AT1G21890 | 50.000 | 310 | 149 | 2 | 10 | 314 | 7 | 315 | 1.43e-103 | 310 |
MS.gene016512.t1 | AT5G13670 | 41.514 | 383 | 205 | 6 | 9 | 388 | 3 | 369 | 8.53e-100 | 301 |
MS.gene016512.t1 | AT2G37450 | 44.375 | 320 | 149 | 4 | 18 | 336 | 13 | 304 | 1.17e-83 | 259 |
MS.gene016512.t1 | AT1G75500 | 38.095 | 378 | 211 | 6 | 10 | 368 | 16 | 389 | 6.88e-81 | 253 |
MS.gene016512.t1 | AT1G75500 | 38.095 | 378 | 211 | 6 | 10 | 368 | 16 | 389 | 6.88e-81 | 253 |
MS.gene016512.t1 | AT1G09380 | 38.298 | 329 | 192 | 4 | 10 | 333 | 4 | 326 | 1.25e-80 | 252 |
MS.gene016512.t1 | AT3G18200 | 40.059 | 337 | 191 | 5 | 3 | 337 | 24 | 351 | 6.33e-76 | 241 |
MS.gene016512.t1 | AT4G08290 | 41.473 | 258 | 148 | 2 | 6 | 263 | 5 | 259 | 3.59e-72 | 228 |
MS.gene016512.t1 | AT4G30420 | 37.576 | 330 | 198 | 4 | 10 | 336 | 5 | 329 | 2.74e-71 | 229 |
MS.gene016512.t1 | AT4G30420 | 37.771 | 323 | 193 | 4 | 17 | 336 | 2 | 319 | 1.75e-70 | 226 |
MS.gene016512.t1 | AT3G30340 | 36.061 | 330 | 205 | 3 | 21 | 349 | 18 | 342 | 1.81e-70 | 226 |
MS.gene016512.t1 | AT5G64700 | 34.985 | 343 | 215 | 3 | 10 | 347 | 4 | 343 | 4.55e-69 | 222 |
MS.gene016512.t1 | AT3G53210 | 36.391 | 327 | 204 | 2 | 10 | 336 | 6 | 328 | 4.61e-68 | 220 |
MS.gene016512.t1 | AT1G25270 | 35.583 | 326 | 207 | 3 | 12 | 337 | 1 | 323 | 7.98e-64 | 208 |
MS.gene016512.t1 | AT1G68170 | 35.366 | 328 | 210 | 2 | 9 | 336 | 8 | 333 | 1.34e-61 | 203 |
MS.gene016512.t1 | AT1G68170 | 35.692 | 325 | 207 | 2 | 12 | 336 | 1 | 323 | 1.74e-61 | 202 |
MS.gene016512.t1 | AT1G43650 | 35.258 | 329 | 204 | 4 | 13 | 340 | 6 | 326 | 3.22e-61 | 201 |
MS.gene016512.t1 | AT4G28040 | 33.134 | 335 | 202 | 7 | 13 | 343 | 7 | 323 | 2.57e-60 | 199 |
MS.gene016512.t1 | AT4G28040 | 33.134 | 335 | 202 | 7 | 13 | 343 | 7 | 323 | 2.57e-60 | 199 |
MS.gene016512.t1 | AT4G28040 | 33.134 | 335 | 202 | 7 | 13 | 343 | 7 | 323 | 2.57e-60 | 199 |
MS.gene016512.t1 | AT4G28040 | 33.134 | 335 | 202 | 7 | 13 | 343 | 7 | 323 | 2.57e-60 | 199 |
MS.gene016512.t1 | AT4G28040 | 33.134 | 335 | 202 | 7 | 13 | 343 | 7 | 323 | 2.57e-60 | 199 |
MS.gene016512.t1 | AT2G37450 | 43.933 | 239 | 126 | 3 | 99 | 336 | 1 | 232 | 3.72e-60 | 196 |
MS.gene016512.t1 | AT4G01440 | 34.277 | 318 | 199 | 4 | 29 | 342 | 25 | 336 | 4.04e-59 | 196 |
MS.gene016512.t1 | AT4G01430 | 30.791 | 354 | 231 | 7 | 26 | 377 | 21 | 362 | 5.53e-54 | 183 |
MS.gene016512.t1 | AT5G40210 | 35.542 | 332 | 186 | 7 | 16 | 345 | 15 | 320 | 5.59e-54 | 182 |
MS.gene016512.t1 | AT1G01070 | 32.407 | 324 | 206 | 5 | 18 | 336 | 20 | 335 | 5.20e-52 | 178 |
MS.gene016512.t1 | AT4G01440 | 33.449 | 287 | 184 | 3 | 29 | 314 | 25 | 305 | 1.03e-51 | 176 |
MS.gene016512.t1 | AT1G11450 | 32.298 | 322 | 207 | 4 | 18 | 336 | 20 | 333 | 4.01e-51 | 175 |
MS.gene016512.t1 | AT5G40240 | 31.045 | 335 | 225 | 5 | 10 | 342 | 16 | 346 | 3.01e-50 | 173 |
MS.gene016512.t1 | AT5G40240 | 31.045 | 335 | 225 | 5 | 10 | 342 | 16 | 346 | 3.01e-50 | 173 |
MS.gene016512.t1 | AT5G40240 | 31.045 | 335 | 225 | 5 | 10 | 342 | 30 | 360 | 5.07e-50 | 173 |
MS.gene016512.t1 | AT3G28050 | 30.124 | 322 | 215 | 4 | 16 | 336 | 14 | 326 | 1.45e-49 | 171 |
MS.gene016512.t1 | AT2G37450 | 43.396 | 212 | 112 | 3 | 126 | 336 | 61 | 265 | 1.61e-49 | 169 |
MS.gene016512.t1 | AT2G37450 | 63.265 | 49 | 18 | 0 | 18 | 66 | 13 | 61 | 1.07e-12 | 68.6 |
MS.gene016512.t1 | AT1G11460 | 31.579 | 323 | 209 | 5 | 18 | 336 | 20 | 334 | 5.73e-49 | 169 |
MS.gene016512.t1 | AT5G40230 | 31.737 | 334 | 224 | 4 | 10 | 342 | 17 | 347 | 9.72e-49 | 169 |
MS.gene016512.t1 | AT3G28100 | 31.915 | 329 | 213 | 6 | 16 | 340 | 16 | 337 | 1.60e-48 | 168 |
MS.gene016512.t1 | AT3G53210 | 36.437 | 247 | 153 | 2 | 90 | 336 | 29 | 271 | 7.57e-48 | 166 |
MS.gene016512.t1 | AT3G53210 | 35.391 | 243 | 153 | 2 | 10 | 252 | 6 | 244 | 1.01e-46 | 161 |
MS.gene016512.t1 | AT1G11450 | 33.219 | 292 | 184 | 4 | 48 | 336 | 6 | 289 | 1.67e-46 | 162 |
MS.gene016512.t1 | AT3G30340 | 34.351 | 262 | 163 | 4 | 18 | 278 | 15 | 268 | 5.64e-46 | 159 |
MS.gene016512.t1 | AT1G70260 | 27.011 | 348 | 245 | 4 | 3 | 344 | 1 | 345 | 7.78e-46 | 162 |
MS.gene016512.t1 | AT1G11450 | 32.872 | 289 | 183 | 4 | 51 | 336 | 2 | 282 | 5.68e-45 | 157 |
MS.gene016512.t1 | AT3G18200 | 38.696 | 230 | 130 | 5 | 110 | 337 | 1 | 221 | 1.33e-44 | 155 |
MS.gene016512.t1 | AT4G01430 | 31.488 | 289 | 193 | 3 | 28 | 314 | 23 | 308 | 1.79e-44 | 157 |
MS.gene016512.t1 | AT4G15540 | 30.058 | 346 | 221 | 5 | 4 | 344 | 3 | 332 | 3.24e-44 | 157 |
MS.gene016512.t1 | AT4G15540 | 30.058 | 346 | 221 | 5 | 4 | 344 | 3 | 332 | 3.24e-44 | 157 |
MS.gene016512.t1 | AT5G45370 | 30.383 | 339 | 223 | 4 | 10 | 337 | 16 | 352 | 5.70e-44 | 157 |
MS.gene016512.t1 | AT5G45370 | 30.383 | 339 | 223 | 4 | 10 | 337 | 16 | 352 | 5.70e-44 | 157 |
MS.gene016512.t1 | AT1G01070 | 31.399 | 293 | 195 | 4 | 45 | 336 | 1 | 288 | 5.94e-44 | 155 |
MS.gene016512.t1 | AT5G64700 | 32.692 | 260 | 167 | 3 | 10 | 264 | 4 | 260 | 1.26e-43 | 153 |
MS.gene016512.t1 | AT5G45370 | 30.488 | 328 | 213 | 3 | 10 | 337 | 16 | 328 | 2.64e-43 | 155 |
MS.gene016512.t1 | AT3G28130 | 31.173 | 324 | 214 | 7 | 16 | 336 | 15 | 332 | 5.18e-43 | 154 |
MS.gene016512.t1 | AT3G28070 | 30.183 | 328 | 220 | 5 | 16 | 340 | 19 | 340 | 2.76e-42 | 152 |
MS.gene016512.t1 | AT3G28070 | 32.653 | 245 | 162 | 2 | 96 | 340 | 7 | 248 | 2.92e-42 | 149 |
MS.gene016512.t1 | AT3G45870 | 29.762 | 336 | 227 | 3 | 3 | 331 | 1 | 334 | 1.41e-41 | 151 |
MS.gene016512.t1 | AT4G01440 | 33.755 | 237 | 150 | 3 | 29 | 264 | 25 | 255 | 2.21e-41 | 147 |
MS.gene016512.t1 | AT1G11450 | 30.667 | 300 | 197 | 4 | 18 | 314 | 20 | 311 | 2.39e-41 | 149 |
MS.gene016512.t1 | AT3G28080 | 30.675 | 326 | 215 | 6 | 16 | 337 | 16 | 334 | 5.61e-41 | 149 |
MS.gene016512.t1 | AT5G47470 | 30.571 | 350 | 208 | 10 | 5 | 339 | 21 | 350 | 6.58e-41 | 149 |
MS.gene016512.t1 | AT5G47470 | 30.259 | 347 | 213 | 9 | 5 | 339 | 49 | 378 | 9.29e-41 | 149 |
MS.gene016512.t1 | AT5G47470 | 30.259 | 347 | 213 | 9 | 5 | 339 | 49 | 378 | 1.10e-40 | 149 |
MS.gene016512.t1 | AT4G01450 | 32.198 | 323 | 207 | 5 | 26 | 346 | 21 | 333 | 2.65e-39 | 144 |
MS.gene016512.t1 | AT3G28130 | 33.745 | 243 | 154 | 5 | 96 | 336 | 9 | 246 | 3.00e-39 | 141 |
MS.gene016512.t1 | AT3G28130 | 33.745 | 243 | 154 | 5 | 96 | 336 | 9 | 246 | 3.00e-39 | 141 |
MS.gene016512.t1 | AT3G28080 | 32.780 | 241 | 157 | 3 | 98 | 337 | 9 | 245 | 3.26e-39 | 141 |
MS.gene016512.t1 | AT3G28080 | 32.780 | 241 | 157 | 3 | 98 | 337 | 9 | 245 | 3.26e-39 | 141 |
MS.gene016512.t1 | AT3G28080 | 32.780 | 241 | 157 | 3 | 98 | 337 | 9 | 245 | 3.26e-39 | 141 |
MS.gene016512.t1 | AT3G28080 | 32.780 | 241 | 157 | 3 | 98 | 337 | 9 | 245 | 3.26e-39 | 141 |
MS.gene016512.t1 | AT4G24980 | 29.032 | 310 | 149 | 6 | 28 | 337 | 1 | 239 | 3.49e-39 | 141 |
MS.gene016512.t1 | AT3G28080 | 32.780 | 241 | 157 | 3 | 98 | 337 | 90 | 326 | 3.68e-38 | 141 |
MS.gene016512.t1 | AT4G19185 | 29.641 | 334 | 222 | 5 | 15 | 337 | 22 | 353 | 1.61e-36 | 137 |
MS.gene016512.t1 | AT4G01440 | 32.328 | 232 | 147 | 4 | 115 | 342 | 3 | 228 | 9.00e-36 | 132 |
MS.gene016512.t1 | AT4G01440 | 32.328 | 232 | 147 | 4 | 115 | 342 | 3 | 228 | 9.00e-36 | 132 |
MS.gene016512.t1 | AT4G01450 | 31.271 | 291 | 188 | 5 | 26 | 314 | 21 | 301 | 1.21e-35 | 134 |
MS.gene016512.t1 | AT3G45870 | 28.840 | 319 | 218 | 3 | 3 | 314 | 1 | 317 | 3.24e-35 | 132 |
MS.gene016512.t1 | AT1G43650 | 30.952 | 252 | 166 | 3 | 13 | 264 | 6 | 249 | 1.67e-34 | 129 |
MS.gene016512.t1 | AT1G11450 | 31.452 | 248 | 159 | 4 | 92 | 336 | 2 | 241 | 2.68e-34 | 128 |
MS.gene016512.t1 | AT4G16620 | 29.070 | 344 | 202 | 7 | 22 | 344 | 20 | 342 | 6.92e-33 | 127 |
MS.gene016512.t1 | AT4G01450 | 33.480 | 227 | 139 | 5 | 26 | 250 | 21 | 237 | 1.49e-32 | 124 |
MS.gene016512.t1 | AT3G28070 | 28.808 | 302 | 206 | 5 | 16 | 314 | 19 | 314 | 4.44e-32 | 124 |
MS.gene016512.t1 | AT4G01450 | 34.300 | 207 | 125 | 4 | 26 | 230 | 21 | 218 | 6.22e-31 | 119 |
MS.gene016512.t1 | AT3G28070 | 31.308 | 214 | 144 | 2 | 127 | 340 | 1 | 211 | 4.57e-30 | 116 |
MS.gene016512.t1 | AT1G60050 | 25.073 | 343 | 247 | 6 | 9 | 343 | 8 | 348 | 9.14e-30 | 119 |
MS.gene016512.t1 | AT3G28100 | 31.452 | 248 | 160 | 5 | 16 | 259 | 16 | 257 | 9.43e-30 | 116 |
MS.gene016512.t1 | AT3G45870 | 29.572 | 257 | 173 | 2 | 3 | 252 | 1 | 256 | 2.02e-29 | 115 |
MS.gene016512.t1 | AT3G28130 | 33.019 | 212 | 135 | 5 | 127 | 336 | 1 | 207 | 3.76e-28 | 110 |
MS.gene016512.t1 | AT3G28080 | 28.049 | 328 | 167 | 9 | 16 | 337 | 16 | 280 | 4.77e-28 | 112 |
MS.gene016512.t1 | AT3G28080 | 31.604 | 212 | 140 | 3 | 127 | 337 | 1 | 208 | 5.88e-28 | 110 |
MS.gene016512.t1 | AT4G01430 | 28.692 | 237 | 156 | 6 | 142 | 377 | 1 | 225 | 2.18e-27 | 108 |
MS.gene016512.t1 | AT5G45370 | 29.482 | 251 | 164 | 4 | 98 | 337 | 2 | 250 | 9.29e-27 | 108 |
MS.gene016512.t1 | AT5G45370 | 29.482 | 251 | 164 | 4 | 98 | 337 | 2 | 250 | 9.29e-27 | 108 |
MS.gene016512.t1 | AT4G19185 | 27.907 | 258 | 173 | 5 | 91 | 337 | 20 | 275 | 1.19e-26 | 108 |
MS.gene016512.t1 | AT3G28080 | 29.218 | 243 | 109 | 6 | 98 | 337 | 9 | 191 | 3.40e-26 | 105 |
MS.gene016512.t1 | AT3G28100 | 32.673 | 202 | 126 | 5 | 16 | 213 | 16 | 211 | 2.15e-23 | 98.6 |
MS.gene016512.t1 | AT3G28130 | 28.629 | 248 | 169 | 6 | 16 | 260 | 15 | 257 | 2.39e-23 | 98.6 |
MS.gene016512.t1 | AT4G16620 | 29.699 | 266 | 146 | 6 | 99 | 344 | 1 | 245 | 3.13e-23 | 98.2 |
MS.gene016512.t1 | AT4G16620 | 29.699 | 266 | 146 | 6 | 99 | 344 | 1 | 245 | 3.13e-23 | 98.2 |
MS.gene016512.t1 | AT3G45870 | 28.511 | 235 | 158 | 4 | 105 | 331 | 27 | 259 | 7.28e-23 | 98.2 |
MS.gene016512.t1 | AT4G16620 | 28.632 | 234 | 133 | 4 | 22 | 241 | 20 | 233 | 7.11e-21 | 92.0 |
MS.gene016512.t1 | AT3G28130 | 30.097 | 206 | 137 | 5 | 16 | 219 | 15 | 215 | 3.11e-19 | 86.3 |
MS.gene016512.t1 | AT5G45370 | 28.054 | 221 | 146 | 4 | 128 | 337 | 74 | 292 | 2.70e-18 | 85.5 |
MS.gene016512.t1 | AT3G45870 | 27.064 | 218 | 149 | 4 | 105 | 314 | 27 | 242 | 9.27e-17 | 79.7 |
MS.gene016512.t1 | AT3G45870 | 27.064 | 218 | 149 | 4 | 105 | 314 | 27 | 242 | 9.27e-17 | 79.7 |
MS.gene016512.t1 | AT3G45870 | 27.273 | 165 | 118 | 2 | 167 | 331 | 21 | 183 | 2.11e-12 | 67.0 |
MS.gene016512.t1 | AT3G45870 | 27.564 | 156 | 104 | 3 | 105 | 252 | 27 | 181 | 6.27e-11 | 62.0 |
Find 80 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATTTGAGCACCCTTTAT+TGG | 0.161865 | 8.2:+59564811 | None:intergenic |
AAAATTCGGAATGTTATCTT+AGG | 0.260272 | 8.2:+59567166 | None:intergenic |
TGATATTCCTTTGCCAATAA+AGG | 0.262662 | 8.2:-59564824 | MS.gene016512:CDS |
GGAGCTATCTTGATTGTTAT+AGG | 0.277036 | 8.2:-59564901 | MS.gene016512:CDS |
TAGGTTTATATTCTGTTCTA+TGG | 0.281033 | 8.2:-59564882 | MS.gene016512:CDS |
GCTATGATATGCTTACAATT+TGG | 0.300057 | 8.2:-59567406 | MS.gene016512:CDS |
ACTTCACTTGTGGTCTTCAT+TGG | 0.318744 | 8.2:-59565742 | MS.gene016512:CDS |
TGAAAATTTGCAAGAAAATT+CGG | 0.322415 | 8.2:+59567152 | None:intergenic |
TTATCATTGCCACCTTTGCT+TGG | 0.363715 | 8.2:-59565975 | MS.gene016512:CDS |
GATCAAAATTTCTATTATGC+TGG | 0.374704 | 8.2:-59566827 | MS.gene016512:CDS |
CAGGATCTTCTGAAAGAGAT+TGG | 0.374788 | 8.2:-59566017 | MS.gene016512:CDS |
GATATTCCTTTGCCAATAAA+GGG | 0.379436 | 8.2:-59564823 | MS.gene016512:CDS |
TATCATTGCCACCTTTGCTT+GGG | 0.380505 | 8.2:-59565974 | MS.gene016512:CDS |
TGCTTACAATTTGGCTATGC+TGG | 0.382541 | 8.2:-59567397 | MS.gene016512:CDS |
ATGCTAATGACATTATATAA+AGG | 0.391959 | 8.2:-59566108 | MS.gene016512:CDS |
AATCTGTTCTGCAAGGATAA+AGG | 0.397927 | 8.2:+59565112 | None:intergenic |
ATGTACAAGGGCTAGTGATT+AGG | 0.401274 | 8.2:-59565202 | MS.gene016512:CDS |
GCTCAAATGAGTGGAAATTC+AGG | 0.402269 | 8.2:-59564799 | MS.gene016512:CDS |
CTTCTCTATGGAGGATTGGT+TGG | 0.405246 | 8.2:-59565675 | MS.gene016512:CDS |
AGGTTTATATTCTGTTCTAT+GGG | 0.410985 | 8.2:-59564881 | MS.gene016512:CDS |
GATGATCATTGTTGCAATCA+TGG | 0.415373 | 8.2:-59565138 | MS.gene016512:CDS |
ATCAAAATTTCTATTATGCT+GGG | 0.431799 | 8.2:-59566826 | MS.gene016512:CDS |
CTCTCAAACATAAATGCAAA+TGG | 0.436031 | 8.2:+59567280 | None:intergenic |
GTCCTATTGTGGAGATGGTA+TGG | 0.436646 | 8.2:-59566086 | MS.gene016512:CDS |
GAGGTGCCAAGCAAAGATAT+TGG | 0.444722 | 8.2:-59566157 | MS.gene016512:CDS |
AGGTGCCAAGCAAAGATATT+GGG | 0.448969 | 8.2:-59566156 | MS.gene016512:CDS |
TTCTCTATGGAGGATTGGTT+GGG | 0.451905 | 8.2:-59565674 | MS.gene016512:CDS |
GATCCTTCTCTATGGAGGAT+TGG | 0.458481 | 8.2:-59565679 | MS.gene016512:CDS |
GCCCATACCATCTCCACAAT+AGG | 0.458933 | 8.2:+59566084 | None:intergenic |
CTGAGCATGATCCTTCTCTA+TGG | 0.462525 | 8.2:-59565687 | MS.gene016512:CDS |
TTCGGAATGTTATCTTAGGT+TGG | 0.479766 | 8.2:+59567170 | None:intergenic |
GGACATAGTGGCTCATTCCT+TGG | 0.492407 | 8.2:+59567344 | None:intergenic |
CTTGCAGAACAGATTTACTC+TGG | 0.496224 | 8.2:-59565104 | MS.gene016512:CDS |
GATCATCATAAGTGGGCTAA+AGG | 0.497400 | 8.2:+59565154 | None:intergenic |
GGGAATTGTGACCTCAAGCT+TGG | 0.497579 | 8.2:-59565231 | MS.gene016512:CDS |
CATTTGCATTTATGTTTGAG+AGG | 0.499498 | 8.2:-59567279 | MS.gene016512:intron |
CTAAAGGCAGTTGCAAAGAC+AGG | 0.501855 | 8.2:+59565170 | None:intergenic |
CTCATTGCACAAGAGAAGGT+TGG | 0.503653 | 8.2:+59566788 | None:intergenic |
TGGTATGAACATTATCACTA+AGG | 0.506134 | 8.2:-59567377 | MS.gene016512:CDS |
GCCATCACAAAAGTCATGGC+TGG | 0.507574 | 8.2:+59566755 | None:intergenic |
ATGCTTATTGCAAATGAAGA+AGG | 0.513113 | 8.2:+59564715 | None:intergenic |
CTATGTGGGTGCAGTGTGAT+GGG | 0.513384 | 8.2:-59564922 | MS.gene016512:intron |
GCAACAATGATCATCATAAG+TGG | 0.519358 | 8.2:+59565146 | None:intergenic |
TTAGTAGTAAGCTCTCTAGT+AGG | 0.522491 | 8.2:+59564691 | None:intergenic |
TGAGCACCCTTTATTGGCAA+AGG | 0.522528 | 8.2:+59564817 | None:intergenic |
AGCTTGGCATACTATGTACA+AGG | 0.527654 | 8.2:-59565215 | MS.gene016512:CDS |
TAAAGGTCCTATTGTGGAGA+TGG | 0.529191 | 8.2:-59566091 | MS.gene016512:CDS |
TTGTTCCCAATATCTTTGCT+TGG | 0.531263 | 8.2:+59566151 | None:intergenic |
ACTATGTGGGTGCAGTGTGA+TGG | 0.535209 | 8.2:-59564923 | MS.gene016512:intron |
GGGCTAGTGATTAGGAAGAA+AGG | 0.551748 | 8.2:-59565194 | MS.gene016512:CDS |
CAGAACAGATTTACTCTGGA+GGG | 0.561325 | 8.2:-59565100 | MS.gene016512:intron |
ATCTCTTTCAGAAGATCCTG+TGG | 0.563505 | 8.2:+59566020 | None:intergenic |
GATAAACGACGAGGACATAG+TGG | 0.564461 | 8.2:+59567332 | None:intergenic |
ATGGAAGATCCTTACAGCAT+AGG | 0.565176 | 8.2:+59565630 | None:intergenic |
ATGATCATTGTTGCAATCAT+GGG | 0.565857 | 8.2:-59565137 | MS.gene016512:CDS |
AGACTAACCCAAGAAGAGCT+AGG | 0.568023 | 8.2:+59567128 | None:intergenic |
TCCTATTGTGGAGATGGTAT+GGG | 0.568336 | 8.2:-59566085 | MS.gene016512:CDS |
GTAATGTTTCATGTTCTCAA+AGG | 0.571931 | 8.2:+59567432 | None:intergenic |
GTTGCTCATTGCACAAGAGA+AGG | 0.578267 | 8.2:+59566784 | None:intergenic |
GAGTGAAGCCCAAGCAAAGG+TGG | 0.584171 | 8.2:+59565966 | None:intergenic |
AACTGCCATCACAAAAGTCA+TGG | 0.584413 | 8.2:+59566751 | None:intergenic |
ATTATATAAAGGTCCTATTG+TGG | 0.588030 | 8.2:-59566097 | MS.gene016512:CDS |
ACTAAGTCTTACTTCACTTG+TGG | 0.588891 | 8.2:-59565752 | MS.gene016512:CDS |
CAACAATGATCATCATAAGT+GGG | 0.593912 | 8.2:+59565147 | None:intergenic |
ACACATGAAACAACAACCAC+AGG | 0.596729 | 8.2:-59566036 | MS.gene016512:CDS |
CAACCAATCCTCCATAGAGA+AGG | 0.600707 | 8.2:+59565676 | None:intergenic |
CAGAGTAAATCTGTTCTGCA+AGG | 0.604588 | 8.2:+59565105 | None:intergenic |
TGTTCTATGGGGAAAGCACA+AGG | 0.606487 | 8.2:-59564869 | MS.gene016512:CDS |
TACATAGTATGCCAAGCTTG+AGG | 0.608423 | 8.2:+59565220 | None:intergenic |
AAAGAGTGAAGCCCAAGCAA+AGG | 0.613193 | 8.2:+59565963 | None:intergenic |
GGTTTATATTCTGTTCTATG+GGG | 0.615502 | 8.2:-59564880 | MS.gene016512:CDS |
TAGAAGCAGTTGCAAAAGCG+TGG | 0.617111 | 8.2:+59567308 | None:intergenic |
ATAAAGGGTGCTCAAATGAG+TGG | 0.625024 | 8.2:-59564808 | MS.gene016512:CDS |
AGATAAACATAAAGCAAGTG+AGG | 0.626481 | 8.2:-59566176 | MS.gene016512:CDS |
AGCATGATCCTTCTCTATGG+AGG | 0.629127 | 8.2:-59565684 | MS.gene016512:CDS |
GCAGAACAGATTTACTCTGG+AGG | 0.643564 | 8.2:-59565101 | MS.gene016512:CDS |
ACTAAGGTTTCTCTCAACCA+AGG | 0.665839 | 8.2:-59567361 | MS.gene016512:CDS |
GACACAGATCAAGTAAAACA+TGG | 0.688084 | 8.2:-59564763 | MS.gene016512:CDS |
GCTTGGCATACTATGTACAA+GGG | 0.751986 | 8.2:-59565214 | MS.gene016512:CDS |
AAGCGTGGCGATAAACGACG+AGG | 0.774739 | 8.2:+59567323 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAGAGATTATTAATTAAT+TGG | + | chr8.2:59565552-59565571 | None:intergenic | 10.0% |
!!! | CATCATTAATTAATTATTTT+TGG | - | chr8.2:59565817-59565836 | MS.gene016512:intron | 10.0% |
!!! | TTTTGTTTTTAAATATGAAA+AGG | - | chr8.2:59565920-59565939 | MS.gene016512:intron | 10.0% |
!!! | TTTTTTATTATCTTTGAAAA+GGG | - | chr8.2:59565113-59565132 | MS.gene016512:CDS | 10.0% |
!! | AATAGTGAAGTAAAATAAAA+AGG | - | chr8.2:59565716-59565735 | MS.gene016512:CDS | 15.0% |
!! | ATAGTGAAGTAAAATAAAAA+GGG | - | chr8.2:59565717-59565736 | MS.gene016512:CDS | 15.0% |
!! | TTCAAAAAATTGTCAAAAAA+TGG | + | chr8.2:59566727-59566746 | None:intergenic | 15.0% |
!!! | AGATAAAAACATTTTTTTAG+AGG | + | chr8.2:59566534-59566553 | None:intergenic | 15.0% |
!!! | CAAAATTCAGATTATTTTAA+GGG | - | chr8.2:59565414-59565433 | MS.gene016512:intron | 15.0% |
!!! | GTTTTTTATTATCTTTGAAA+AGG | - | chr8.2:59565112-59565131 | MS.gene016512:CDS | 15.0% |
!!! | TTTTGTGCAAATTATTAATT+GGG | - | chr8.2:59566315-59566334 | MS.gene016512:intron | 15.0% |
!!! | TTTTTGTGCAAATTATTAAT+TGG | - | chr8.2:59566314-59566333 | MS.gene016512:intron | 15.0% |
!! | AATTAATATGCTAACTCTTA+TGG | - | chr8.2:59564913-59564932 | MS.gene016512:intron | 20.0% |
!! | AGACAATATTATGTAGAAAA+TGG | - | chr8.2:59565451-59565470 | MS.gene016512:intron | 20.0% |
!! | ATCAAAATTTCTATTATGCT+GGG | - | chr8.2:59565300-59565319 | MS.gene016512:intron | 20.0% |
!! | ATGCTAATGACATTATATAA+AGG | - | chr8.2:59566018-59566037 | MS.gene016512:CDS | 20.0% |
!! | TGAAAATTTGCAAGAAAATT+CGG | + | chr8.2:59564977-59564996 | None:intergenic | 20.0% |
!! | TGACAAAATTTAATACAAGT+TGG | + | chr8.2:59567134-59567153 | None:intergenic | 20.0% |
!! | TTACTATTGTAATTCTTAGA+AGG | - | chr8.2:59566837-59566856 | MS.gene016512:CDS | 20.0% |
!! | TTGATTGATCAATAAATTAC+AGG | - | chr8.2:59565267-59565286 | MS.gene016512:intron | 20.0% |
!!! | AAACATGTAGTTTTTAGATT+TGG | + | chr8.2:59565096-59565115 | None:intergenic | 20.0% |
!!! | AAATTTTGTCATCATTCAAA+TGG | - | chr8.2:59567143-59567162 | MS.gene016512:CDS | 20.0% |
!!! | CCAAAATTCAGATTATTTTA+AGG | - | chr8.2:59565413-59565432 | MS.gene016512:intron | 20.0% |
!!! | CCTTAAAATAATCTGAATTT+TGG | + | chr8.2:59565416-59565435 | None:intergenic | 20.0% |
!!! | CTAACTAAAGAATTTGATTT+TGG | - | chr8.2:59567180-59567199 | MS.gene016512:intron | 20.0% |
!!! | GTTTTTAAATATGAAAAGGA+TGG | - | chr8.2:59565924-59565943 | MS.gene016512:intron | 20.0% |
! | AAAATTCGGAATGTTATCTT+AGG | + | chr8.2:59564963-59564982 | None:intergenic | 25.0% |
! | AGGTTTATATTCTGTTCTAT+GGG | - | chr8.2:59567245-59567264 | MS.gene016512:intron | 25.0% |
! | ATTATATAAAGGTCCTATTG+TGG | - | chr8.2:59566029-59566048 | MS.gene016512:CDS | 25.0% |
! | ATTATGTAGAAAATGGAAGA+AGG | - | chr8.2:59565458-59565477 | MS.gene016512:intron | 25.0% |
! | GATCAAAATTTCTATTATGC+TGG | - | chr8.2:59565299-59565318 | MS.gene016512:intron | 25.0% |
! | GTGACTGAAAAGTTAATATA+TGG | - | chr8.2:59565165-59565184 | MS.gene016512:CDS | 25.0% |
! | TAGGTTTATATTCTGTTCTA+TGG | - | chr8.2:59567244-59567263 | MS.gene016512:intron | 25.0% |
! | TGACTACTAAAAAGAACTTA+TGG | + | chr8.2:59565858-59565877 | None:intergenic | 25.0% |
! | TGCAAATTATTAATTGGGTT+AGG | - | chr8.2:59566320-59566339 | MS.gene016512:intron | 25.0% |
! | TTAGAGGTAAGTTAAAATCA+TGG | + | chr8.2:59566518-59566537 | None:intergenic | 25.0% |
!! | ATTATTCATGCGATATTTTG+TGG | + | chr8.2:59565192-59565211 | None:intergenic | 25.0% |
!!! | AAAGGAATTTGATTTTTCCA+TGG | + | chr8.2:59564679-59564698 | None:intergenic | 25.0% |
!!! | AATTTGATTTTGGACTATGT+GGG | - | chr8.2:59567190-59567209 | MS.gene016512:intron | 25.0% |
!!! | ATTTTGAGGATGTCTATTTT+TGG | + | chr8.2:59566067-59566086 | None:intergenic | 25.0% |
!!! | TAGAAATTTTGATCAATCAC+TGG | + | chr8.2:59565293-59565312 | None:intergenic | 25.0% |
!!! | TTGTGCAGTTTTATAATTTG+TGG | - | chr8.2:59565143-59565162 | MS.gene016512:CDS | 25.0% |
AGATAAACATAAAGCAAGTG+AGG | - | chr8.2:59565950-59565969 | MS.gene016512:intron | 30.0% | |
ATGATCATTGTTGCAATCAT+GGG | - | chr8.2:59566989-59567008 | MS.gene016512:intron | 30.0% | |
ATGCTTATTGCAAATGAAGA+AGG | + | chr8.2:59567414-59567433 | None:intergenic | 30.0% | |
ATGTCAATACCTATATTCGA+GGG | - | chr8.2:59566796-59566815 | MS.gene016512:CDS | 30.0% | |
CAACAATGATCATCATAAGT+GGG | + | chr8.2:59566982-59567001 | None:intergenic | 30.0% | |
CATTTGCATTTATGTTTGAG+AGG | - | chr8.2:59564847-59564866 | MS.gene016512:CDS | 30.0% | |
CGGATTAAGAATGAATTTCA+CGG | + | chr8.2:59565745-59565764 | None:intergenic | 30.0% | |
CTCTCAAACATAAATGCAAA+TGG | + | chr8.2:59564849-59564868 | None:intergenic | 30.0% | |
GATATTCCTTTGCCAATAAA+GGG | - | chr8.2:59567303-59567322 | MS.gene016512:CDS | 30.0% | |
GCTATGATATGCTTACAATT+TGG | - | chr8.2:59564720-59564739 | MS.gene016512:CDS | 30.0% | |
GGTTTATATTCTGTTCTATG+GGG | - | chr8.2:59567246-59567265 | MS.gene016512:intron | 30.0% | |
GTAATGTTTCATGTTCTCAA+AGG | + | chr8.2:59564697-59564716 | None:intergenic | 30.0% | |
TCTTATGGTTTCACATTTGT+AGG | - | chr8.2:59564928-59564947 | MS.gene016512:intron | 30.0% | |
TGATATTCCTTTGCCAATAA+AGG | - | chr8.2:59567302-59567321 | MS.gene016512:CDS | 30.0% | |
TGGTATGAACATTATCACTA+AGG | - | chr8.2:59564749-59564768 | MS.gene016512:CDS | 30.0% | |
! | CTGAAAGAGATTGGATTTTA+GGG | - | chr8.2:59566118-59566137 | MS.gene016512:CDS | 30.0% |
! | GTTTCATGTGTTTCATTTTG+AGG | + | chr8.2:59566081-59566100 | None:intergenic | 30.0% |
! | TCTGAAAGAGATTGGATTTT+AGG | - | chr8.2:59566117-59566136 | MS.gene016512:CDS | 30.0% |
!! | ATTTTAAGGGTGTGAATGTT+TGG | - | chr8.2:59565427-59565446 | MS.gene016512:intron | 30.0% |
!! | GAATTTGATTTTGGACTATG+TGG | - | chr8.2:59567189-59567208 | MS.gene016512:intron | 30.0% |
!! | GCATTCTTACTCTGTTATTT+TGG | - | chr8.2:59566768-59566787 | MS.gene016512:CDS | 30.0% |
!! | TTCTAGCGATGAAGTTTTAA+AGG | + | chr8.2:59565633-59565652 | None:intergenic | 30.0% |
AATCTGTTCTGCAAGGATAA+AGG | + | chr8.2:59567017-59567036 | None:intergenic | 35.0% | |
ACTAAGTCTTACTTCACTTG+TGG | - | chr8.2:59566374-59566393 | MS.gene016512:intron | 35.0% | |
CATGTCAATACCTATATTCG+AGG | - | chr8.2:59566795-59566814 | MS.gene016512:CDS | 35.0% | |
GACACAGATCAAGTAAAACA+TGG | - | chr8.2:59567363-59567382 | MS.gene016512:CDS | 35.0% | |
GATGATCATTGTTGCAATCA+TGG | - | chr8.2:59566988-59567007 | MS.gene016512:intron | 35.0% | |
GCAACAATGATCATCATAAG+TGG | + | chr8.2:59566983-59567002 | None:intergenic | 35.0% | |
GGAGCTATCTTGATTGTTAT+AGG | - | chr8.2:59567225-59567244 | MS.gene016512:intron | 35.0% | |
TGGTTTCACATTTGTAGGAA+AGG | - | chr8.2:59564933-59564952 | MS.gene016512:intron | 35.0% | |
TTAGTAGTAAGCTCTCTAGT+AGG | + | chr8.2:59567438-59567457 | None:intergenic | 35.0% | |
TTCGGAATGTTATCTTAGGT+TGG | + | chr8.2:59564959-59564978 | None:intergenic | 35.0% | |
TTGTTCCCAATATCTTTGCT+TGG | + | chr8.2:59565978-59565997 | None:intergenic | 35.0% | |
! | CTTCTTGCTAGCTTAATTCA+CGG | - | chr8.2:59565021-59565040 | MS.gene016512:intron | 35.0% |
!! | ATTGGGAACAATTTTGACAG+TGG | - | chr8.2:59565987-59566006 | MS.gene016512:CDS | 35.0% |
!! | ATTTTCATCCTAGCTCTTCT+TGG | - | chr8.2:59564990-59565009 | MS.gene016512:intron | 35.0% |
!! | CTTTTAAGTCCCTCGAATAT+AGG | + | chr8.2:59566808-59566827 | None:intergenic | 35.0% |
!! | TTTTCATCCTAGCTCTTCTT+GGG | - | chr8.2:59564991-59565010 | MS.gene016512:intron | 35.0% |
!!! | AGCTATTGCTGTTACTTTTG+TGG | - | chr8.2:59566416-59566435 | MS.gene016512:intron | 35.0% |
AACTGCCATCACAAAAGTCA+TGG | + | chr8.2:59565378-59565397 | None:intergenic | 40.0% | |
ACACATGAAACAACAACCAC+AGG | - | chr8.2:59566090-59566109 | MS.gene016512:CDS | 40.0% | |
ACTAAGGTTTCTCTCAACCA+AGG | - | chr8.2:59564765-59564784 | MS.gene016512:CDS | 40.0% | |
ACTTCACTTGTGGTCTTCAT+TGG | - | chr8.2:59566384-59566403 | MS.gene016512:intron | 40.0% | |
AGCTTGGCATACTATGTACA+AGG | - | chr8.2:59566911-59566930 | MS.gene016512:intron | 40.0% | |
AGGTGCCAAGCAAAGATATT+GGG | - | chr8.2:59565970-59565989 | MS.gene016512:CDS | 40.0% | |
ATCTCTTTCAGAAGATCCTG+TGG | + | chr8.2:59566109-59566128 | None:intergenic | 40.0% | |
ATGGAAGATCCTTACAGCAT+AGG | + | chr8.2:59566499-59566518 | None:intergenic | 40.0% | |
CAGAACAGATTTACTCTGGA+GGG | - | chr8.2:59567026-59567045 | MS.gene016512:intron | 40.0% | |
CAGAGTAAATCTGTTCTGCA+AGG | + | chr8.2:59567024-59567043 | None:intergenic | 40.0% | |
CTCATTTGAGCACCCTTTAT+TGG | + | chr8.2:59567318-59567337 | None:intergenic | 40.0% | |
CTCGTCGCTAAATTTAGTGA+CGG | + | chr8.2:59565765-59565784 | None:intergenic | 40.0% | |
CTTGCAGAACAGATTTACTC+TGG | - | chr8.2:59567022-59567041 | MS.gene016512:intron | 40.0% | |
GCTCAAATGAGTGGAAATTC+AGG | - | chr8.2:59567327-59567346 | MS.gene016512:CDS | 40.0% | |
GCTTGGCATACTATGTACAA+GGG | - | chr8.2:59566912-59566931 | MS.gene016512:intron | 40.0% | |
TAAAGGTCCTATTGTGGAGA+TGG | - | chr8.2:59566035-59566054 | MS.gene016512:CDS | 40.0% | |
TACATAGTATGCCAAGCTTG+AGG | + | chr8.2:59566909-59566928 | None:intergenic | 40.0% | |
TATCATTGCCACCTTTGCTT+GGG | - | chr8.2:59566152-59566171 | MS.gene016512:CDS | 40.0% | |
TCCTATTGTGGAGATGGTAT+GGG | - | chr8.2:59566041-59566060 | MS.gene016512:CDS | 40.0% | |
TGCTTACAATTTGGCTATGC+TGG | - | chr8.2:59564729-59564748 | MS.gene016512:CDS | 40.0% | |
TTATCATTGCCACCTTTGCT+TGG | - | chr8.2:59566151-59566170 | MS.gene016512:CDS | 40.0% | |
! | ATGTACAAGGGCTAGTGATT+AGG | - | chr8.2:59566924-59566943 | MS.gene016512:intron | 40.0% |
! | CAGGATCTTCTGAAAGAGAT+TGG | - | chr8.2:59566109-59566128 | MS.gene016512:CDS | 40.0% |
! | TTGCTAGCTTAATTCACGGT+TGG | - | chr8.2:59565025-59565044 | MS.gene016512:intron | 40.0% |
!! | ATAAAGGGTGCTCAAATGAG+TGG | - | chr8.2:59567318-59567337 | MS.gene016512:CDS | 40.0% |
!! | GATCATCATAAGTGGGCTAA+AGG | + | chr8.2:59566975-59566994 | None:intergenic | 40.0% |
!! | TTCTCTATGGAGGATTGGTT+GGG | - | chr8.2:59566452-59566471 | MS.gene016512:intron | 40.0% |
!! | TTGTGATGGCAGTTTTATGC+AGG | - | chr8.2:59565384-59565403 | MS.gene016512:intron | 40.0% |
AAAGAGTGAAGCCCAAGCAA+AGG | + | chr8.2:59566166-59566185 | None:intergenic | 45.0% | |
AGACTAACCCAAGAAGAGCT+AGG | + | chr8.2:59565001-59565020 | None:intergenic | 45.0% | |
AGCATGATCCTTCTCTATGG+AGG | - | chr8.2:59566442-59566461 | MS.gene016512:intron | 45.0% | |
CAACCAATCCTCCATAGAGA+AGG | + | chr8.2:59566453-59566472 | None:intergenic | 45.0% | |
CTAAAGGCAGTTGCAAAGAC+AGG | + | chr8.2:59566959-59566978 | None:intergenic | 45.0% | |
CTCATTGCACAAGAGAAGGT+TGG | + | chr8.2:59565341-59565360 | None:intergenic | 45.0% | |
CTGAGCATGATCCTTCTCTA+TGG | - | chr8.2:59566439-59566458 | MS.gene016512:intron | 45.0% | |
GATAAACGACGAGGACATAG+TGG | + | chr8.2:59564797-59564816 | None:intergenic | 45.0% | |
GATCCTTCTCTATGGAGGAT+TGG | - | chr8.2:59566447-59566466 | MS.gene016512:intron | 45.0% | |
GCAGAACAGATTTACTCTGG+AGG | - | chr8.2:59567025-59567044 | MS.gene016512:intron | 45.0% | |
GTCCTATTGTGGAGATGGTA+TGG | - | chr8.2:59566040-59566059 | MS.gene016512:CDS | 45.0% | |
GTTGCTCATTGCACAAGAGA+AGG | + | chr8.2:59565345-59565364 | None:intergenic | 45.0% | |
TAGAAGCAGTTGCAAAAGCG+TGG | + | chr8.2:59564821-59564840 | None:intergenic | 45.0% | |
TGAGCACCCTTTATTGGCAA+AGG | + | chr8.2:59567312-59567331 | None:intergenic | 45.0% | |
TTGCTTCTGCCTATGCTGTA+AGG | - | chr8.2:59566487-59566506 | MS.gene016512:intron | 45.0% | |
! | CTTCTCTATGGAGGATTGGT+TGG | - | chr8.2:59566451-59566470 | MS.gene016512:intron | 45.0% |
! | GAGGTGCCAAGCAAAGATAT+TGG | - | chr8.2:59565969-59565988 | MS.gene016512:CDS | 45.0% |
! | GGGCTAGTGATTAGGAAGAA+AGG | - | chr8.2:59566932-59566951 | MS.gene016512:intron | 45.0% |
! | TCCAGCCATGACTTTTGTGA+TGG | - | chr8.2:59565370-59565389 | MS.gene016512:intron | 45.0% |
! | TGTTCTATGGGGAAAGCACA+AGG | - | chr8.2:59567257-59567276 | MS.gene016512:intron | 45.0% |
!! | GGAACAATTTTGACAGTGGC+TGG | - | chr8.2:59565991-59566010 | MS.gene016512:CDS | 45.0% |
!!! | AATTTATTTTATTTTTGTTA+GGG | - | chr8.2:59566875-59566894 | MS.gene016512:intron | 5.0% |
!!! | TAATTTATTTTATTTTTGTT+AGG | - | chr8.2:59566874-59566893 | MS.gene016512:intron | 5.0% |
ACTATGTGGGTGCAGTGTGA+TGG | - | chr8.2:59567203-59567222 | MS.gene016512:intron | 50.0% | |
CTATGTGGGTGCAGTGTGAT+GGG | - | chr8.2:59567204-59567223 | MS.gene016512:intron | 50.0% | |
GCCATCACAAAAGTCATGGC+TGG | + | chr8.2:59565374-59565393 | None:intergenic | 50.0% | |
GCCCATACCATCTCCACAAT+AGG | + | chr8.2:59566045-59566064 | None:intergenic | 50.0% | |
GGACATAGTGGCTCATTCCT+TGG | + | chr8.2:59564785-59564804 | None:intergenic | 50.0% | |
GGGAATTGTGACCTCAAGCT+TGG | - | chr8.2:59566895-59566914 | MS.gene016512:intron | 50.0% | |
AAGCGTGGCGATAAACGACG+AGG | + | chr8.2:59564806-59564825 | None:intergenic | 55.0% | |
GAGTGAAGCCCAAGCAAAGG+TGG | + | chr8.2:59566163-59566182 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 59564672 | 59567476 | 59564672 | ID=MS.gene016512 |
chr8.2 | mRNA | 59564672 | 59567476 | 59564672 | ID=MS.gene016512.t1;Parent=MS.gene016512 |
chr8.2 | exon | 59567280 | 59567476 | 59567280 | ID=MS.gene016512.t1.exon1;Parent=MS.gene016512.t1 |
chr8.2 | CDS | 59567280 | 59567476 | 59567280 | ID=cds.MS.gene016512.t1;Parent=MS.gene016512.t1 |
chr8.2 | exon | 59567136 | 59567198 | 59567136 | ID=MS.gene016512.t1.exon2;Parent=MS.gene016512.t1 |
chr8.2 | CDS | 59567136 | 59567198 | 59567136 | ID=cds.MS.gene016512.t1;Parent=MS.gene016512.t1 |
chr8.2 | exon | 59566743 | 59566859 | 59566743 | ID=MS.gene016512.t1.exon3;Parent=MS.gene016512.t1 |
chr8.2 | CDS | 59566743 | 59566859 | 59566743 | ID=cds.MS.gene016512.t1;Parent=MS.gene016512.t1 |
chr8.2 | exon | 59565954 | 59566206 | 59565954 | ID=MS.gene016512.t1.exon4;Parent=MS.gene016512.t1 |
chr8.2 | CDS | 59565954 | 59566206 | 59565954 | ID=cds.MS.gene016512.t1;Parent=MS.gene016512.t1 |
chr8.2 | exon | 59565645 | 59565806 | 59565645 | ID=MS.gene016512.t1.exon5;Parent=MS.gene016512.t1 |
chr8.2 | CDS | 59565645 | 59565806 | 59565645 | ID=cds.MS.gene016512.t1;Parent=MS.gene016512.t1 |
chr8.2 | exon | 59565101 | 59565252 | 59565101 | ID=MS.gene016512.t1.exon6;Parent=MS.gene016512.t1 |
chr8.2 | CDS | 59565101 | 59565252 | 59565101 | ID=cds.MS.gene016512.t1;Parent=MS.gene016512.t1 |
chr8.2 | exon | 59564672 | 59564930 | 59564672 | ID=MS.gene016512.t1.exon7;Parent=MS.gene016512.t1 |
chr8.2 | CDS | 59564672 | 59564930 | 59564672 | ID=cds.MS.gene016512.t1;Parent=MS.gene016512.t1 |
Gene Sequence |
Protein sequence |