Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01782.t1 | AES63733.2 | 82.3 | 702 | 95 | 6 | 196 | 876 | 76 | 769 | 0.00E+00 | 1109.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01782.t1 | B6JX19 | 33.6 | 509 | 297 | 10 | 381 | 874 | 157 | 639 | 7.3e-76 | 287.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01782.t1 | G7ILH3 | 82.3 | 702 | 95 | 6 | 196 | 876 | 76 | 769 | 0.0e+00 | 1109.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene01782 | MS.gene033253 | PPI |
MS.gene008731 | MS.gene01782 | PPI |
MS.gene39589 | MS.gene01782 | PPI |
MS.gene01782 | MS.gene48368 | PPI |
MS.gene47512 | MS.gene01782 | PPI |
MS.gene56868 | MS.gene01782 | PPI |
MS.gene060830 | MS.gene01782 | PPI |
MS.gene26564 | MS.gene01782 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01782.t1 | MTR_2g012650 | 84.906 | 689 | 75 | 6 | 209 | 876 | 1 | 681 | 0.0 | 1162 |
MS.gene01782.t1 | MTR_2g012650 | 83.565 | 718 | 84 | 8 | 180 | 876 | 65 | 769 | 0.0 | 1154 |
MS.gene01782.t1 | MTR_2g012650 | 85.090 | 664 | 70 | 6 | 209 | 851 | 1 | 656 | 0.0 | 1119 |
MS.gene01782.t1 | MTR_2g012650 | 84.844 | 640 | 68 | 6 | 209 | 827 | 1 | 632 | 0.0 | 1074 |
MS.gene01782.t1 | MTR_2g036890 | 78.355 | 693 | 120 | 7 | 205 | 875 | 61 | 745 | 0.0 | 1037 |
MS.gene01782.t1 | MTR_2g036890 | 78.229 | 689 | 120 | 6 | 209 | 875 | 1 | 681 | 0.0 | 1032 |
MS.gene01782.t1 | MTR_2g012650 | 82.897 | 649 | 78 | 8 | 180 | 807 | 65 | 701 | 0.0 | 1025 |
MS.gene01782.t1 | MTR_2g036890 | 78.956 | 613 | 105 | 4 | 209 | 804 | 1 | 606 | 0.0 | 926 |
MS.gene01782.t1 | MTR_4g415340 | 82.178 | 303 | 24 | 2 | 209 | 511 | 1 | 273 | 6.08e-157 | 461 |
MS.gene01782.t1 | MTR_8g466490 | 50.331 | 302 | 105 | 9 | 582 | 852 | 49 | 336 | 2.56e-73 | 244 |
MS.gene01782.t1 | MTR_8g466500 | 42.553 | 282 | 138 | 6 | 319 | 577 | 59 | 339 | 7.77e-55 | 194 |
MS.gene01782.t1 | MTR_6g471090 | 49.390 | 164 | 66 | 5 | 23 | 170 | 16 | 178 | 6.82e-40 | 147 |
MS.gene01782.t1 | MTR_6g071410 | 42.925 | 212 | 100 | 5 | 5 | 197 | 3 | 212 | 2.20e-39 | 145 |
MS.gene01782.t1 | MTR_6g070890 | 42.925 | 212 | 100 | 5 | 5 | 197 | 3 | 212 | 2.20e-39 | 145 |
MS.gene01782.t1 | MTR_6g070900 | 40.394 | 203 | 100 | 5 | 10 | 197 | 12 | 208 | 4.94e-35 | 133 |
MS.gene01782.t1 | MTR_6g071400 | 40.394 | 203 | 100 | 5 | 10 | 197 | 12 | 208 | 4.94e-35 | 133 |
MS.gene01782.t1 | MTR_6g471080 | 43.814 | 194 | 91 | 6 | 21 | 197 | 11 | 203 | 4.38e-31 | 121 |
MS.gene01782.t1 | MTR_2g048270 | 44.966 | 149 | 63 | 5 | 53 | 188 | 2 | 144 | 2.20e-26 | 107 |
MS.gene01782.t1 | MTR_6g007630 | 61.798 | 89 | 29 | 2 | 1 | 89 | 1 | 84 | 9.17e-25 | 99.0 |
MS.gene01782.t1 | MTR_6g071710 | 44.928 | 138 | 61 | 4 | 75 | 197 | 19 | 156 | 2.90e-23 | 97.8 |
MS.gene01782.t1 | MTR_4g119428 | 35.000 | 180 | 98 | 6 | 22 | 189 | 65 | 237 | 1.35e-17 | 83.6 |
MS.gene01782.t1 | MTR_1g057270 | 36.970 | 165 | 84 | 6 | 39 | 189 | 81 | 239 | 1.99e-17 | 83.2 |
MS.gene01782.t1 | MTR_7g106010 | 28.061 | 196 | 117 | 7 | 16 | 192 | 37 | 227 | 1.94e-12 | 68.2 |
MS.gene01782.t1 | MTR_7g105970 | 29.744 | 195 | 107 | 8 | 19 | 193 | 43 | 227 | 2.70e-12 | 67.8 |
MS.gene01782.t1 | MTR_7g106000 | 27.692 | 195 | 111 | 6 | 19 | 193 | 43 | 227 | 3.23e-12 | 67.4 |
MS.gene01782.t1 | MTR_7g105870 | 32.571 | 175 | 94 | 6 | 28 | 189 | 62 | 225 | 5.50e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01782.t1 | AT1G17690 | 47.500 | 640 | 284 | 12 | 280 | 875 | 123 | 754 | 0.0 | 568 |
MS.gene01782.t1 | AT5G06320 | 35.052 | 194 | 99 | 8 | 13 | 192 | 51 | 231 | 5.80e-19 | 87.4 |
MS.gene01782.t1 | AT3G11650 | 31.319 | 182 | 102 | 5 | 20 | 189 | 66 | 236 | 5.01e-16 | 79.0 |
MS.gene01782.t1 | AT2G35980 | 31.176 | 170 | 99 | 5 | 13 | 169 | 42 | 206 | 5.09e-14 | 72.8 |
MS.gene01782.t1 | AT2G35460 | 30.769 | 182 | 101 | 7 | 20 | 188 | 65 | 234 | 7.25e-14 | 72.8 |
Find 157 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTATACCTTCAAGATATTT+TGG | 0.184698 | 2.3:-71427720 | None:intergenic |
AATTCTGATGACAATGATTC+TGG | 0.228686 | 2.3:+71427062 | MS.gene01782:CDS |
ATGCCTCCTTCTGTCTGTTT+GGG | 0.246347 | 2.3:+71440699 | MS.gene01782:CDS |
CTTCCCGCAACATTGCTTAT+AGG | 0.257142 | 2.3:-71427029 | None:intergenic |
TTAATATTTCATTTGATTTA+CGG | 0.257324 | 2.3:-71432914 | None:intergenic |
TCATCACTTGGCTATTGATT+TGG | 0.258663 | 2.3:+71420510 | MS.gene01782:CDS |
TTACAGGCAGACAATAATTC+TGG | 0.275454 | 2.3:+71437330 | MS.gene01782:CDS |
CATTAAATCTTTGAACTTGC+TGG | 0.277674 | 2.3:+71426379 | MS.gene01782:CDS |
GCGAAGTAACATTGAGCATT+AGG | 0.283761 | 2.3:+71432880 | MS.gene01782:CDS |
AGCTGGGATGTACCAGTTAT+TGG | 0.284670 | 2.3:+71427667 | MS.gene01782:CDS |
AAGAGACCATTCTATCTAAA+AGG | 0.285140 | 2.3:+71431506 | MS.gene01782:CDS |
AGCTGAATTTCAAATTCTTT+TGG | 0.286195 | 2.3:-71427648 | None:intergenic |
AATGCCTCCTTCTGTCTGTT+TGG | 0.302935 | 2.3:+71440698 | MS.gene01782:CDS |
TTTACAATCAAATATAAGTT+TGG | 0.303722 | 2.3:+71420535 | MS.gene01782:CDS |
AGGGTTTCTTGATGCAATCT+TGG | 0.307508 | 2.3:-71419000 | None:intergenic |
TGACGCTTCTTCATAATGTT+AGG | 0.307741 | 2.3:-71425190 | None:intergenic |
CGAAGTAACATTGAGCATTA+GGG | 0.308788 | 2.3:+71432881 | MS.gene01782:CDS |
ATTCAGATCAAGAAGATATT+AGG | 0.309515 | 2.3:+71427129 | MS.gene01782:CDS |
TTGGAACTACTTGGGCAAAT+AGG | 0.311503 | 2.3:+71442261 | MS.gene01782:CDS |
TATAATGAAGAGACACGTTT+AGG | 0.319446 | 2.3:+71420481 | MS.gene01782:CDS |
CTCTTCAAGCCTAGCCAGTT+TGG | 0.320115 | 2.3:-71431694 | None:intergenic |
ATCTTGCAACCATAGGATAT+TGG | 0.320316 | 2.3:+71432798 | MS.gene01782:intron |
TGATCAGAGTCATTTATTCT+TGG | 0.328753 | 2.3:-71440512 | None:intergenic |
TTATACTCACCAAGTTGTTT+AGG | 0.332203 | 2.3:-71420463 | None:intergenic |
CTTTCTTTGATCACTTCTAA+TGG | 0.332375 | 2.3:+71420613 | MS.gene01782:CDS |
AATGCGCATAACATCTGTTC+TGG | 0.338130 | 2.3:-71436075 | None:intergenic |
CCATGATGCGTGTGTCTTCA+AGG | 0.341053 | 2.3:-71431529 | None:intergenic |
TGCACAATGACTTTATTGTT+AGG | 0.347773 | 2.3:-71419020 | None:intergenic |
GATCAGAGTCATTTATTCTT+GGG | 0.351458 | 2.3:-71440511 | None:intergenic |
GGGTAAAACTCCTTCCTCTC+TGG | 0.355312 | 2.3:-71441158 | None:intergenic |
TATTGTCTGCCTGTAAAATC+TGG | 0.355553 | 2.3:-71437323 | None:intergenic |
ATTTAGGTATATGGCCATAA+AGG | 0.360229 | 2.3:+71440816 | MS.gene01782:intron |
CATTTAGTGACATGAAAATA+AGG | 0.367158 | 2.3:-71420655 | None:intergenic |
ACAGACAGAAGGAGGCATTC+TGG | 0.370583 | 2.3:-71440694 | None:intergenic |
AATGATTCTGGATTAATAGA+AGG | 0.374743 | 2.3:+71427074 | MS.gene01782:CDS |
CTTCAATCATGTTGGACTGT+TGG | 0.392650 | 2.3:+71432826 | MS.gene01782:CDS |
TGAAGAGACTGAATGCAATA+AGG | 0.394864 | 2.3:+71435696 | MS.gene01782:CDS |
GCACAATGACTTTATTGTTA+GGG | 0.398843 | 2.3:-71419019 | None:intergenic |
CTGAGGATTCAGTGGATTTG+AGG | 0.400017 | 2.3:+71427171 | MS.gene01782:CDS |
CAGACAGAAGGAGGCATTCT+GGG | 0.404135 | 2.3:-71440693 | None:intergenic |
TTTCTTCATGCCAGATTCGC+GGG | 0.418041 | 2.3:+71441108 | MS.gene01782:intron |
CAATTTGAGACACCAATAAC+TGG | 0.419193 | 2.3:-71427679 | None:intergenic |
ATCTTTGCCTCCAGATGTCT+TGG | 0.419636 | 2.3:-71431166 | None:intergenic |
GAGTGGGACAATCACCTCTA+TGG | 0.421554 | 2.3:-71435743 | None:intergenic |
TTTATTAATCTAAAGTTTGA+AGG | 0.423631 | 2.3:+71420418 | MS.gene01782:CDS |
CAAGAAGATATTAGGACAAA+TGG | 0.424307 | 2.3:+71427137 | MS.gene01782:CDS |
TTTCACGCCTCGACAAGTCT+CGG | 0.425229 | 2.3:+71441747 | MS.gene01782:CDS |
AAAAGAATTTGAAATTCAGC+TGG | 0.427109 | 2.3:+71427650 | MS.gene01782:CDS |
TTCACGCCTCGACAAGTCTC+GGG | 0.431958 | 2.3:+71441748 | MS.gene01782:CDS |
TCTGTTCTGGGCTGCGTAGA+TGG | 0.432566 | 2.3:-71436062 | None:intergenic |
TATTGATCATGCAGATGTAA+TGG | 0.438667 | 2.3:+71435890 | MS.gene01782:CDS |
TACATGGAAGCTGAGATTAG+AGG | 0.439585 | 2.3:-71418913 | None:intergenic |
AAGAATAAATGACTCTGATC+AGG | 0.441660 | 2.3:+71440514 | MS.gene01782:CDS |
ATAATGAAGAGACACGTTTA+GGG | 0.444515 | 2.3:+71420482 | MS.gene01782:CDS |
TCCTTAGCTGTCATCACCTA+TGG | 0.444874 | 2.3:+71418888 | MS.gene01782:CDS |
CAGATTGCAAATCTGCTTGA+CGG | 0.447315 | 2.3:+71441695 | MS.gene01782:intron |
CATCAGTGTTCTAATTATGA+AGG | 0.447798 | 2.3:+71438576 | MS.gene01782:CDS |
GGCTTCTAACTTGTAAGATA+AGG | 0.451073 | 2.3:-71418979 | None:intergenic |
AATTGCACATGGAGAGGAAC+TGG | 0.452040 | 2.3:+71427697 | MS.gene01782:CDS |
GACGCTTCTTCATAATGTTA+GGG | 0.453224 | 2.3:-71425189 | None:intergenic |
ACTTACACCTTCGGCTTACA+AGG | 0.455491 | 2.3:+71432005 | MS.gene01782:CDS |
GCTTATACAACTTACACCTT+CGG | 0.456485 | 2.3:+71431996 | MS.gene01782:CDS |
ATGGATGTCTCCAAGACATC+TGG | 0.457629 | 2.3:+71431156 | MS.gene01782:CDS |
CTTCTGAGTCTAACTTGAAA+AGG | 0.460418 | 2.3:+71425227 | MS.gene01782:CDS |
ACTGAGAGATTCCGAGATCA+AGG | 0.465252 | 2.3:+71431726 | MS.gene01782:CDS |
TAAAGTCATTGTGCATTATC+CGG | 0.468283 | 2.3:+71419028 | MS.gene01782:CDS |
TACAGGCAGACAATAATTCT+GGG | 0.469425 | 2.3:+71437331 | MS.gene01782:CDS |
TGTGTAAATATAAATTCAAC+AGG | 0.469722 | 2.3:+71439069 | MS.gene01782:CDS |
TGGTTCCAGGCAGCAGCTAT+CGG | 0.469806 | 2.3:+71431465 | MS.gene01782:intron |
CATGTCACTAAATGTGATGC+TGG | 0.472359 | 2.3:+71420664 | MS.gene01782:CDS |
AAACTTTAGATTAATAAAAG+TGG | 0.473624 | 2.3:-71420413 | None:intergenic |
AACTGGCCAAAATATCTTGA+AGG | 0.475405 | 2.3:+71427714 | MS.gene01782:CDS |
GGTAAAACTCCTTCCTCTCT+GGG | 0.480136 | 2.3:-71441157 | None:intergenic |
TGAGGGAAGCTTCATTTACA+TGG | 0.480889 | 2.3:-71418929 | None:intergenic |
ATAAGGTATTGTTTCCTATG+AGG | 0.481592 | 2.3:-71418962 | None:intergenic |
CTCACAAAGTTCAACCTCAT+AGG | 0.489566 | 2.3:+71418948 | MS.gene01782:CDS |
GGTTCCAGGCAGCAGCTATC+GGG | 0.489703 | 2.3:+71431466 | MS.gene01782:intron |
TTGTGTACCGTGTTGTAAAG+AGG | 0.491265 | 2.3:+71431974 | MS.gene01782:CDS |
ATGCGCATAACATCTGTTCT+GGG | 0.493418 | 2.3:-71436074 | None:intergenic |
TTTAATATCAACTCCTGTCC+CGG | 0.494122 | 2.3:+71431105 | MS.gene01782:CDS |
CGGTACACAATATTTGCAAA+TGG | 0.494963 | 2.3:-71431961 | None:intergenic |
CTTGCATTTGCAGTGATGAC+CGG | 0.497811 | 2.3:-71419047 | None:intergenic |
TCTCCTATAAGCAATGTTGC+GGG | 0.498785 | 2.3:+71427026 | MS.gene01782:CDS |
ATTTCTTCATGCCAGATTCG+CGG | 0.499293 | 2.3:+71441107 | MS.gene01782:intron |
AGATTGCAAATCTGCTTGAC+GGG | 0.503240 | 2.3:+71441696 | MS.gene01782:intron |
TGCAGATGTAATGGCAATGC+AGG | 0.503707 | 2.3:+71435899 | MS.gene01782:CDS |
CTTCTCCTTCAGACCGGGAC+AGG | 0.505180 | 2.3:-71431118 | None:intergenic |
GAATCCTGTAGGTTTATGTA+CGG | 0.509765 | 2.3:+71439870 | MS.gene01782:intron |
TTCAAGTTAGACTCAGAAGT+AGG | 0.510623 | 2.3:-71425223 | None:intergenic |
GGACTGCAATGCACGATTGG+TGG | 0.511428 | 2.3:-71420583 | None:intergenic |
CCTTGAAGACACACGCATCA+TGG | 0.521234 | 2.3:+71431529 | MS.gene01782:CDS |
CAATAATGAAGTCTGAGGTA+TGG | 0.527090 | 2.3:-71433287 | None:intergenic |
CAACTCCTGTCCCGGTCTGA+AGG | 0.527867 | 2.3:+71431113 | MS.gene01782:CDS |
AAAGGACTGCAATGCACGAT+TGG | 0.530382 | 2.3:-71420586 | None:intergenic |
AAAATGTATTCGAGATCGCT+TGG | 0.531244 | 2.3:-71432855 | None:intergenic |
GTAAGAACTAGCAAATATCA+TGG | 0.534665 | 2.3:-71440636 | None:intergenic |
CTATGAGGTTGAACTTTGTG+AGG | 0.536317 | 2.3:-71418947 | None:intergenic |
GACGAGTAAAACCTTGATCT+CGG | 0.537229 | 2.3:-71431737 | None:intergenic |
AGGAGAAGTTATATGAGCAT+TGG | 0.542600 | 2.3:+71431133 | MS.gene01782:CDS |
ACATGGAAGCTGAGATTAGA+GGG | 0.542847 | 2.3:-71418912 | None:intergenic |
TAATCAAACCTTCTCCATCA+TGG | 0.544738 | 2.3:-71426409 | None:intergenic |
TTCTCCTATAAGCAATGTTG+CGG | 0.545117 | 2.3:+71427025 | MS.gene01782:CDS |
CTCCTACATTTGAGCAAGTG+AGG | 0.547473 | 2.3:+71418817 | MS.gene01782:CDS |
TGCCTCCTTCTGTCTGTTTG+GGG | 0.551808 | 2.3:+71440700 | MS.gene01782:CDS |
GCACGTCGTTTGTTCACTGA+AGG | 0.551936 | 2.3:+71440850 | MS.gene01782:CDS |
AACTACTTGGGCAAATAGGT+TGG | 0.554265 | 2.3:+71442265 | MS.gene01782:CDS |
AGAATGATTCCAAACTGGCT+AGG | 0.565399 | 2.3:+71431685 | MS.gene01782:CDS |
TTATTAATCTAAAGTTTGAA+GGG | 0.566537 | 2.3:+71420419 | MS.gene01782:CDS |
GAAGTTATATGAGCATTGGA+TGG | 0.568331 | 2.3:+71431137 | MS.gene01782:CDS |
TTTAGGGATCTATCATCACT+TGG | 0.568424 | 2.3:+71420498 | MS.gene01782:CDS |
GTGATCAAAGAAAGACTCAA+AGG | 0.569613 | 2.3:-71420604 | None:intergenic |
AAAGAAAGAAGGTAGAAGGG+TGG | 0.569826 | 2.3:+71426334 | MS.gene01782:CDS |
AAAGAATTTGAAATTCAGCT+GGG | 0.571537 | 2.3:+71427651 | MS.gene01782:CDS |
ATCAGTGTTCTAATTATGAA+GGG | 0.578171 | 2.3:+71438577 | MS.gene01782:CDS |
CTCACTTGCTCAAATGTAGG+AGG | 0.578314 | 2.3:-71418816 | None:intergenic |
GAAGATATTAGGACAAATGG+TGG | 0.588345 | 2.3:+71427140 | MS.gene01782:CDS |
AAACTCAAACCTAAACAACT+TGG | 0.589771 | 2.3:+71420454 | MS.gene01782:CDS |
TAAATCTTTGAACTTGCTGG+AGG | 0.590349 | 2.3:+71426382 | MS.gene01782:CDS |
GTATTCATACCCAGAGAGGA+AGG | 0.592124 | 2.3:+71441148 | MS.gene01782:CDS |
ATATAACTTCTCCTTCAGAC+CGG | 0.592689 | 2.3:-71431124 | None:intergenic |
GCTGAGATTAGAGGGTCCAT+AGG | 0.594411 | 2.3:-71418904 | None:intergenic |
GTCTCAAATTGCACATGGAG+AGG | 0.597195 | 2.3:+71427691 | MS.gene01782:CDS |
GTGTTCTAATTATGAAGGGA+AGG | 0.598899 | 2.3:+71438581 | MS.gene01782:CDS |
ACCCTCACTTGCTCAAATGT+AGG | 0.600026 | 2.3:-71418819 | None:intergenic |
GAGGATGACCATGATGGAGA+AGG | 0.600520 | 2.3:+71426401 | MS.gene01782:CDS |
CGGTCATCACTGCAAATGCA+AGG | 0.600832 | 2.3:+71419048 | MS.gene01782:CDS |
CAAACTGGCTAGGCTTGAAG+AGG | 0.602437 | 2.3:+71431695 | MS.gene01782:CDS |
TATGAGGTTGAACTTTGTGA+GGG | 0.605648 | 2.3:-71418946 | None:intergenic |
AGCCACATCTGAGGATTCAG+TGG | 0.611898 | 2.3:+71427163 | MS.gene01782:CDS |
CTCCCCAAACAGACAGAAGG+AGG | 0.611933 | 2.3:-71440702 | None:intergenic |
ATCCACTGAATCCTCAGATG+TGG | 0.611963 | 2.3:-71427165 | None:intergenic |
TATAACTTCTCCTTCAGACC+GGG | 0.615217 | 2.3:-71431123 | None:intergenic |
CACGTCGTTTGTTCACTGAA+GGG | 0.617714 | 2.3:+71440851 | MS.gene01782:CDS |
TTCTTCATGCCAGATTCGCG+GGG | 0.617754 | 2.3:+71441109 | MS.gene01782:intron |
TGGGCTGCGTAGATGGTAAG+CGG | 0.620409 | 2.3:-71436055 | None:intergenic |
TCCTACATTTGAGCAAGTGA+GGG | 0.625618 | 2.3:+71418818 | MS.gene01782:CDS |
TAAACTACCTTGTAAGCCGA+AGG | 0.625672 | 2.3:-71432012 | None:intergenic |
AGAAGGTTCTGAGACTGAAG+AGG | 0.630248 | 2.3:+71427091 | MS.gene01782:CDS |
TCCATAGGTGATGACAGCTA+AGG | 0.631354 | 2.3:-71418889 | None:intergenic |
TTGGTGTCTCAAATTGCACA+TGG | 0.634340 | 2.3:+71427686 | MS.gene01782:CDS |
CGAAGCAATAATGAAGTCTG+AGG | 0.635678 | 2.3:-71433292 | None:intergenic |
GATGTCTCCAAGACATCTGG+AGG | 0.637454 | 2.3:+71431159 | MS.gene01782:CDS |
AAATGGTGGAGCCACATCTG+AGG | 0.640560 | 2.3:+71427154 | MS.gene01782:CDS |
TTACTCCCCAAACAGACAGA+AGG | 0.644056 | 2.3:-71440705 | None:intergenic |
GAAGTAACATTGAGCATTAG+GGG | 0.647461 | 2.3:+71432882 | MS.gene01782:CDS |
TGTAAAGTCAATAGTAGATG+CGG | 0.648605 | 2.3:+71439898 | MS.gene01782:CDS |
GCATTACCCGAGACTTGTCG+AGG | 0.650775 | 2.3:-71441754 | None:intergenic |
CACACACTTTCATAAATCTG+TGG | 0.654553 | 2.3:-71440915 | None:intergenic |
ATGTTATGCGCATTAGACCA+TGG | 0.670625 | 2.3:+71436084 | MS.gene01782:CDS |
TCATGTATTCATACCCAGAG+AGG | 0.672335 | 2.3:+71441144 | MS.gene01782:CDS |
TTGCTGGAGGATGACCATGA+TGG | 0.673286 | 2.3:+71426395 | MS.gene01782:CDS |
AGGATTGCAGTTGAAGACCA+TGG | 0.679075 | 2.3:-71418796 | None:intergenic |
CTTACATTAAGCAAACAAAG+TGG | 0.681485 | 2.3:-71433315 | None:intergenic |
AAACTGGCTAGGCTTGAAGA+GGG | 0.689579 | 2.3:+71431696 | MS.gene01782:CDS |
TTAGTGACATGAAAATAAGG+TGG | 0.689803 | 2.3:-71420652 | None:intergenic |
AAGTGAGGGTCACAATCCAG+TGG | 0.698931 | 2.3:+71418832 | MS.gene01782:CDS |
GTATAAGCCTCTTTACAACA+CGG | 0.716756 | 2.3:-71431981 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 71418798 | 71442325 | 71418798 | ID=MS.gene01782 |
chr2.3 | mRNA | 71418798 | 71442325 | 71418798 | ID=MS.gene01782.t1;Parent=MS.gene01782 |
chr2.3 | exon | 71418798 | 71419069 | 71418798 | ID=MS.gene01782.t1.exon1;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71418798 | 71419069 | 71418798 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71420387 | 71420709 | 71420387 | ID=MS.gene01782.t1.exon2;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71420387 | 71420709 | 71420387 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71425170 | 71425248 | 71425170 | ID=MS.gene01782.t1.exon3;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71425170 | 71425248 | 71425170 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71426304 | 71426422 | 71426304 | ID=MS.gene01782.t1.exon4;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71426304 | 71426422 | 71426304 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71427012 | 71427192 | 71427012 | ID=MS.gene01782.t1.exon5;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71427012 | 71427192 | 71427012 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71427597 | 71427735 | 71427597 | ID=MS.gene01782.t1.exon6;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71427597 | 71427735 | 71427597 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71431102 | 71431225 | 71431102 | ID=MS.gene01782.t1.exon7;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71431102 | 71431225 | 71431102 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71431474 | 71431571 | 71431474 | ID=MS.gene01782.t1.exon8;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71431474 | 71431571 | 71431474 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71431648 | 71431764 | 71431648 | ID=MS.gene01782.t1.exon9;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71431648 | 71431764 | 71431648 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71431946 | 71432026 | 71431946 | ID=MS.gene01782.t1.exon10;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71431946 | 71432026 | 71431946 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71432813 | 71432937 | 71432813 | ID=MS.gene01782.t1.exon11;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71432813 | 71432937 | 71432813 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71433260 | 71433332 | 71433260 | ID=MS.gene01782.t1.exon12;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71433260 | 71433332 | 71433260 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71435691 | 71435750 | 71435691 | ID=MS.gene01782.t1.exon13;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71435691 | 71435750 | 71435691 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71435882 | 71435920 | 71435882 | ID=MS.gene01782.t1.exon14;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71435882 | 71435920 | 71435882 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71436017 | 71436105 | 71436017 | ID=MS.gene01782.t1.exon15;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71436017 | 71436105 | 71436017 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71437306 | 71437370 | 71437306 | ID=MS.gene01782.t1.exon16;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71437306 | 71437370 | 71437306 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71438556 | 71438602 | 71438556 | ID=MS.gene01782.t1.exon17;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71438556 | 71438602 | 71438556 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71439059 | 71439139 | 71439059 | ID=MS.gene01782.t1.exon18;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71439059 | 71439139 | 71439059 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71439881 | 71439952 | 71439881 | ID=MS.gene01782.t1.exon19;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71439881 | 71439952 | 71439881 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71440506 | 71440535 | 71440506 | ID=MS.gene01782.t1.exon20;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71440506 | 71440535 | 71440506 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71440629 | 71440723 | 71440629 | ID=MS.gene01782.t1.exon21;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71440629 | 71440723 | 71440629 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71440822 | 71440930 | 71440822 | ID=MS.gene01782.t1.exon22;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71440822 | 71440930 | 71440822 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71441122 | 71441184 | 71441122 | ID=MS.gene01782.t1.exon23;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71441122 | 71441184 | 71441122 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71441698 | 71441769 | 71441698 | ID=MS.gene01782.t1.exon24;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71441698 | 71441769 | 71441698 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
chr2.3 | exon | 71442248 | 71442325 | 71442248 | ID=MS.gene01782.t1.exon25;Parent=MS.gene01782.t1 |
chr2.3 | CDS | 71442248 | 71442325 | 71442248 | ID=cds.MS.gene01782.t1;Parent=MS.gene01782.t1 |
Gene Sequence |
Protein sequence |