AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017961


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017961.t1 MTR_7g092810 97.012 569 6 1 1 569 1 558 0.0 1130
MS.gene017961.t1 MTR_1g053360 74.650 572 123 6 1 569 1 553 0.0 861
MS.gene017961.t1 MTR_6g045280 81.538 65 12 0 239 303 1 65 1.95e-28 110
MS.gene017961.t1 MTR_7g078290 93.878 49 3 0 152 200 58 106 1.19e-21 90.9
MS.gene017961.t1 MTR_8g032090 63.380 71 8 4 151 212 38 99 1.53e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017961.t1 AT3G57890 74.061 559 123 4 20 569 28 573 0.0 854
MS.gene017961.t1 AT3G57890 69.580 595 123 5 20 569 28 609 0.0 835
MS.gene017961.t1 AT2G42230 70.179 560 147 3 19 569 20 568 0.0 818
MS.gene017961.t1 AT2G42230 71.930 399 103 2 19 408 20 418 0.0 591

Find 158 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCCACAGGAAAGAAATTT+AGG 0.132374 7.1:-14655222 MS.gene017961:intron
GCATTTGTTGAGACCTTAAC+TGG 0.250906 7.1:+14660176 None:intergenic
CTATTTCAATATGGTGATAA+AGG 0.251197 7.1:-14660416 MS.gene017961:CDS
CTGGGAGTAAAAGGTATTAT+AGG 0.263890 7.1:+14655723 None:intergenic
TATGGTTATCACCGACAATA+AGG 0.276184 7.1:+14656407 None:intergenic
CCGTGGCAGAAGCCTCTTAT+AGG 0.284218 7.1:+14662196 None:intergenic
GGATCGGAGAAGATGAGTTT+TGG 0.292650 7.1:+14662431 None:intergenic
TTGAGATACGCCACCATCTA+TGG 0.292789 7.1:-14658209 MS.gene017961:CDS
GTCCGCTCTCTCGCCGCTTC+AGG 0.294438 7.1:-14662108 MS.gene017961:intron
TTCCTCCAACTGGGAGTAAA+AGG 0.294649 7.1:+14655714 None:intergenic
TTAAGCTCACCTGCAACTTA+TGG 0.307873 7.1:+14656389 None:intergenic
CATTCATATGTTCCTCCAAC+TGG 0.307892 7.1:+14655704 None:intergenic
TGGAGTGGACGGTGCTGATT+CGG 0.310793 7.1:+14662526 None:intergenic
CACATTACCAGAGGGCTATA+TGG 0.313819 7.1:-14655351 MS.gene017961:CDS
GACTCTCCTTCAAGCCAGTT+TGG 0.313884 7.1:+14655401 None:intergenic
TATTTCAAAGACTGGTTATA+TGG 0.323652 7.1:-14655123 MS.gene017961:intron
CGGGCTTCTTCAAAAGAAAA+TGG 0.330603 7.1:-14660251 MS.gene017961:CDS
CAAAGGTGCTAAGATGTAAA+TGG 0.331610 7.1:+14658229 None:intergenic
GTTGATGTTGGAGGCGGTGG+TGG 0.338616 7.1:+14662506 None:intergenic
GGAGTGGACGGTGCTGATTC+GGG 0.339750 7.1:+14662527 None:intergenic
TCTCGCTTCGGTTCTTCCTT+CGG 0.350220 7.1:-14662282 MS.gene017961:CDS
CTCCACAGGAAAGAAATTTA+GGG 0.350683 7.1:-14655221 MS.gene017961:intron
GCTTGTGTTTGAATGAGATT+AGG 0.356568 7.1:+14662399 None:intergenic
AAGCATGCATCTGACATTAA+AGG 0.372985 7.1:-14660107 MS.gene017961:CDS
TTTATGTTCAATCCTATAAG+AGG 0.384999 7.1:-14662208 MS.gene017961:CDS
CACCGACAATAAGGGGTTGC+TGG 0.390794 7.1:+14656416 None:intergenic
CTTGTGTTTGAATGAGATTA+GGG 0.394371 7.1:+14662400 None:intergenic
CATTAAAGGTTCCTCTGTTA+AGG 0.396917 7.1:-14660093 MS.gene017961:intron
CGGTGATAACCATAAGTTGC+AGG 0.404355 7.1:-14656398 MS.gene017961:intron
ATGGTTATCACCGACAATAA+GGG 0.404357 7.1:+14656408 None:intergenic
GTGGTTGATGTTGGAGGCGG+TGG 0.405372 7.1:+14662503 None:intergenic
ACAGAACATAGCTTCTGCTT+TGG 0.407772 7.1:-14660288 MS.gene017961:CDS
TGGGAGTAAAAGGTATTATA+GGG 0.411025 7.1:+14655724 None:intergenic
TGCATCCACTGCCCCAGTTA+AGG 0.413791 7.1:-14660189 MS.gene017961:CDS
TCCTGATCAGAGACACTAAC+TGG 0.416501 7.1:+14660227 None:intergenic
CGTTTACGACTTTCTTCTAA+AGG 0.419745 7.1:+14655171 None:intergenic
TCAACCATTCCCAATGCTAT+AGG 0.420508 7.1:+14655643 None:intergenic
CCGCCGCTGTAGCGGATGTC+TGG 0.420542 7.1:-14662160 MS.gene017961:CDS
TTTGGAATATATTGCTGAAC+GGG 0.422807 7.1:-14660270 MS.gene017961:CDS
TTCATGTGTATTTCAAAGAC+TGG 0.426322 7.1:-14655131 MS.gene017961:CDS
ATGAACTTGGGAAGCGGGTA+CGG 0.436290 7.1:+14660322 None:intergenic
ACGGGAACAGCAGGCATGTC+AGG 0.440472 7.1:+14660341 None:intergenic
GAGGAACATATGAATGAAGT+TGG 0.444069 7.1:-14655697 MS.gene017961:CDS
AGATGTAAATGGCAGATTCA+TGG 0.447744 7.1:+14658240 None:intergenic
CAGATTCCAAACTGGCTTGA+AGG 0.448014 7.1:-14655407 MS.gene017961:CDS
ACAAAATTAGTGAACTGGTC+AGG 0.449084 7.1:+14655550 None:intergenic
AGGGTTGTCTTTAGTAGAAC+CGG 0.450172 7.1:+14655376 None:intergenic
GACGGTGCTGATTCGGGTGG+TGG 0.452693 7.1:+14662533 None:intergenic
ATACCACAAAATTAGTGAAC+TGG 0.459765 7.1:+14655545 None:intergenic
TTCTGCCCTCAGTGAATCGT+TGG 0.460738 7.1:-14655672 MS.gene017961:CDS
ACAATAGTCATTGGAGCAGT+TGG 0.463802 7.1:-14658173 MS.gene017961:CDS
CGTCAGCTTTACTATCTACA+AGG 0.464502 7.1:-14654301 MS.gene017961:CDS
TCCAGTTAGTGTCTCTGATC+AGG 0.468213 7.1:-14660228 MS.gene017961:CDS
CACATCAACACTATCAGATT+CGG 0.471812 7.1:+14662250 None:intergenic
TTGTTGTGCAGATTCCAAAC+TGG 0.473183 7.1:-14655415 MS.gene017961:intron
GAAGCGGGTACGGGAACAGC+AGG 0.477784 7.1:+14660332 None:intergenic
AGCTGAGTCTGCTGCTAGGG+TGG 0.481981 7.1:-14655575 MS.gene017961:CDS
GTATTTGTATTGCTAACTGC+CGG 0.482981 7.1:-14656465 MS.gene017961:CDS
TCAGATGCCACAATAGTCAT+TGG 0.483909 7.1:-14658182 MS.gene017961:CDS
CCATCAAAAGCGGAAGTAGA+AGG 0.484578 7.1:+14662137 None:intergenic
GCTTCTGCCACGGACGCATA+AGG 0.486155 7.1:-14662186 MS.gene017961:CDS
AAAGAAATTTAGGGGAGATA+AGG 0.488790 7.1:-14655212 MS.gene017961:CDS
GTCTTATCTGCAAAAGCACT+TGG 0.489451 7.1:-14661265 MS.gene017961:CDS
GGAGGCGGTGGTGGAGTGGA+CGG 0.492523 7.1:+14662515 None:intergenic
TGGGATGAACCTATAGCATT+GGG 0.493761 7.1:-14655652 MS.gene017961:CDS
CAGTCATGAACTTGGGAAGC+GGG 0.497245 7.1:+14660317 None:intergenic
CGTTCTCGATACTCTCGCTT+CGG 0.501127 7.1:-14662294 MS.gene017961:CDS
TTGGGATGAACCTATAGCAT+TGG 0.501174 7.1:-14655653 MS.gene017961:CDS
GTAGAAGCCAGTCATGAACT+TGG 0.501825 7.1:+14660309 None:intergenic
AGGGGTGCAAGTCTCATTGA+AGG 0.505627 7.1:-14660152 MS.gene017961:CDS
TCAAGCTGAGTCTGCTGCTA+GGG 0.510336 7.1:-14655578 MS.gene017961:CDS
TCTAGCAGAGCCTGTGGAGG+GGG 0.512835 7.1:-14661226 MS.gene017961:CDS
CTGGATGAGATAGTGAATCA+TGG 0.514028 7.1:+14655617 None:intergenic
CGAAAGGTTCGCGACGTGGA+TGG 0.514289 7.1:+14662474 None:intergenic
TAGCCCTCTGGTAATGTGAA+AGG 0.514356 7.1:+14655356 None:intergenic
TGGATCACGGTGGTTGATGT+TGG 0.514901 7.1:+14662494 None:intergenic
GATTAGGGTTTGTGCGGGAT+CGG 0.514929 7.1:+14662415 None:intergenic
TAAGCGGTTTACGCCGTCGC+AGG 0.517778 7.1:-14661310 MS.gene017961:CDS
CTCAAGCTGAGTCTGCTGCT+AGG 0.518463 7.1:-14655579 MS.gene017961:CDS
GGTAATAAACCGTGTTCGAA+AGG 0.521454 7.1:+14662458 None:intergenic
CCGCTTCCCAAGTTCATGAC+TGG 0.523437 7.1:-14660316 MS.gene017961:CDS
TTAAGGTCTCAACAAATGCT+AGG 0.523611 7.1:-14660172 MS.gene017961:CDS
TGAACTTGGGAAGCGGGTAC+GGG 0.526890 7.1:+14660323 None:intergenic
GGCATCTGAACATCCATAGA+TGG 0.528316 7.1:+14658196 None:intergenic
TCTGCCCTCAGTGAATCGTT+GGG 0.529878 7.1:-14655671 MS.gene017961:CDS
TAAGGTCTCAACAAATGCTA+GGG 0.531993 7.1:-14660171 MS.gene017961:CDS
AACGAGCTTCGCTTGTTCAA+CGG 0.534307 7.1:+14662313 None:intergenic
AGCCCTCTGGTAATGTGAAA+GGG 0.536140 7.1:+14655357 None:intergenic
CGTCGCGAACCTTTCGAACA+CGG 0.536526 7.1:-14662467 MS.gene017961:CDS
CTTCTAGCAGAGCCTGTGGA+GGG 0.538684 7.1:-14661228 MS.gene017961:CDS
TGGATGAGATAGTGAATCAT+GGG 0.540784 7.1:+14655618 None:intergenic
GAATTCACATTCACCTGAAG+CGG 0.542370 7.1:+14662095 None:intergenic
ATCACGGTGGTTGATGTTGG+AGG 0.543633 7.1:+14662497 None:intergenic
AACCAGCAACCCCTTATTGT+CGG 0.554262 7.1:-14656418 MS.gene017961:CDS
CAAAATTAGTGAACTGGTCA+GGG 0.554549 7.1:+14655551 None:intergenic
TGTTGTAATTGCAGCTTGTG+AGG 0.557301 7.1:-14661341 MS.gene017961:intron
TGTTGGAGGCGGTGGTGGAG+TGG 0.561056 7.1:+14662511 None:intergenic
AAATCGCAACGGAGCCGACT+CGG 0.562921 7.1:+14662354 None:intergenic
CCAGTCATGAACTTGGGAAG+CGG 0.565687 7.1:+14660316 None:intergenic
ATTCATATGTTCCTCCAACT+GGG 0.565926 7.1:+14655705 None:intergenic
TGAGATGCCATATAGCCCTC+TGG 0.566979 7.1:+14655344 None:intergenic
TCTTCTAGCAGAGCCTGTGG+AGG 0.570334 7.1:-14661229 MS.gene017961:CDS
GAATGAGATTAGGGTTTGTG+CGG 0.575352 7.1:+14662409 None:intergenic
AATGAGATTAGGGTTTGTGC+GGG 0.575643 7.1:+14662410 None:intergenic
TATGGTGATAAAGGATCAGA+GGG 0.576370 7.1:-14660407 MS.gene017961:CDS
CATTTGTTGAGACCTTAACT+GGG 0.578793 7.1:+14660177 None:intergenic
TGGTTATCACCGACAATAAG+GGG 0.578982 7.1:+14656409 None:intergenic
CACCTGAAGCGGCGAGAGAG+CGG 0.582553 7.1:+14662106 None:intergenic
TTCGGGTGGTGGTTCCGTCA+TGG 0.582592 7.1:+14662544 None:intergenic
TGAGACCTTAACTGGGGCAG+TGG 0.582688 7.1:+14660184 None:intergenic
ATGGATAGATTCGAGCACCT+TGG 0.584256 7.1:-14660443 MS.gene017961:CDS
CCAGACATCCGCTACAGCGG+CGG 0.585319 7.1:+14662160 None:intergenic
TATTTGTATTGCTAACTGCC+GGG 0.585739 7.1:-14656464 MS.gene017961:CDS
TTCGCGACGTGGATGGATCA+CGG 0.586738 7.1:+14662481 None:intergenic
CTTTGGAATATATTGCTGAA+CGG 0.587953 7.1:-14660271 MS.gene017961:CDS
AACGGAGATCTGAAGCGACT+CGG 0.588984 7.1:+14662331 None:intergenic
ACGGTGGTTGATGTTGGAGG+CGG 0.591031 7.1:+14662500 None:intergenic
GTCTCTTCTAGCAGAGCCTG+TGG 0.591303 7.1:-14661232 MS.gene017961:CDS
CCTATAAGAGGCTTCTGCCA+CGG 0.592535 7.1:-14662196 MS.gene017961:CDS
TTCTAGCAGAGCCTGTGGAG+GGG 0.593663 7.1:-14661227 MS.gene017961:CDS
AGTCATTGGAGCAGTTGGAA+AGG 0.598090 7.1:-14658168 MS.gene017961:intron
TAAGGATTCCGCCGCTGTAG+CGG 0.600747 7.1:-14662168 MS.gene017961:CDS
GCCGACTCGGTTGTTCGAAG+AGG 0.603740 7.1:+14662367 None:intergenic
AGGCCAGACATCCGCTACAG+CGG 0.606545 7.1:+14662157 None:intergenic
GCGGAATCCTTATGCGTCCG+TGG 0.607234 7.1:+14662179 None:intergenic
GATTCACTATCTCATCCAGC+GGG 0.608700 7.1:-14655613 MS.gene017961:CDS
TAGAAGCCAGTCATGAACTT+GGG 0.608803 7.1:+14660310 None:intergenic
ATATGGTGATAAAGGATCAG+AGG 0.608839 7.1:-14660408 MS.gene017961:CDS
TGAACCTATAGCATTGGGAA+TGG 0.609871 7.1:-14655647 MS.gene017961:CDS
TTGTGAGGAGCAACAGTAAG+CGG 0.610899 7.1:-14661326 MS.gene017961:CDS
TCCACAGGAAAGAAATTTAG+GGG 0.612370 7.1:-14655220 MS.gene017961:intron
TAGATGGTGGCGTATCTCAA+AGG 0.614821 7.1:+14658212 None:intergenic
TGAGCATCAGAGACACCCGC+TGG 0.621306 7.1:+14655598 None:intergenic
TCCTCTTCGAACAACCGAGT+CGG 0.621491 7.1:-14662368 MS.gene017961:CDS
TGTTCGAAAGGTTCGCGACG+TGG 0.623614 7.1:+14662470 None:intergenic
AACTGCTCCAATGACTATTG+TGG 0.626928 7.1:+14658175 None:intergenic
TGGCTTGAAGGAGAGTCCAC+CGG 0.633134 7.1:-14655395 MS.gene017961:CDS
AACCCTTTCACATTACCAGA+GGG 0.633964 7.1:-14655359 MS.gene017961:CDS
GTGGACGGTGCTGATTCGGG+TGG 0.638210 7.1:+14662530 None:intergenic
GGGGTGCAAGTCTCATTGAA+GGG 0.639854 7.1:-14660151 MS.gene017961:CDS
ATCTGAACATCCATAGATGG+TGG 0.640921 7.1:+14658199 None:intergenic
AAGGTGCTCGAATCTATCCA+TGG 0.647864 7.1:+14660445 None:intergenic
GTTGTCTTTAGTAGAACCGG+TGG 0.648354 7.1:+14655379 None:intergenic
TCATCCCAACGATTCACTGA+GGG 0.651225 7.1:+14655667 None:intergenic
GATTCGGAATCAGACTCCGA+AGG 0.656584 7.1:+14662266 None:intergenic
AAGCGACTCGGAAATCGCAA+CGG 0.660671 7.1:+14662343 None:intergenic
GCTTCTTCATCAGCCTGCGA+CGG 0.661506 7.1:+14661297 None:intergenic
TGATTCACTATCTCATCCAG+CGG 0.671487 7.1:-14655614 MS.gene017961:CDS
CAACCCTTTCACATTACCAG+AGG 0.672455 7.1:-14655360 MS.gene017961:CDS
CATATTGAAATAGAAAACCA+AGG 0.685998 7.1:+14660426 None:intergenic
GGACAAGTATCCATCAAAAG+CGG 0.692177 7.1:+14662127 None:intergenic
AAGGTCTCAACAAATGCTAG+GGG 0.697951 7.1:-14660170 MS.gene017961:CDS
TAAGGGACATACCTTAACAG+AGG 0.699164 7.1:+14660082 None:intergenic
GGATGAGATAGTGAATCATG+GGG 0.716827 7.1:+14655619 None:intergenic
ATTTGTTGAGACCTTAACTG+GGG 0.720915 7.1:+14660178 None:intergenic
AAGCTGACGAATGTTACCAG+AGG 0.723921 7.1:+14654315 None:intergenic
TTCATCCCAACGATTCACTG+AGG 0.728891 7.1:+14655666 None:intergenic
GCGACGTGGATGGATCACGG+TGG 0.828525 7.1:+14662484 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.1 gene 14654294 14662564 14654294 ID=MS.gene017961
chr7.1 mRNA 14654294 14662564 14654294 ID=MS.gene017961.t1;Parent=MS.gene017961
chr7.1 exon 14662109 14662564 14662109 ID=MS.gene017961.t1.exon1;Parent=MS.gene017961.t1
chr7.1 CDS 14662109 14662564 14662109 ID=cds.MS.gene017961.t1;Parent=MS.gene017961.t1
chr7.1 exon 14661209 14661349 14661209 ID=MS.gene017961.t1.exon2;Parent=MS.gene017961.t1
chr7.1 CDS 14661209 14661349 14661209 ID=cds.MS.gene017961.t1;Parent=MS.gene017961.t1
chr7.1 exon 14660094 14660474 14660094 ID=MS.gene017961.t1.exon3;Parent=MS.gene017961.t1
chr7.1 CDS 14660094 14660474 14660094 ID=cds.MS.gene017961.t1;Parent=MS.gene017961.t1
chr7.1 exon 14658169 14658273 14658169 ID=MS.gene017961.t1.exon4;Parent=MS.gene017961.t1
chr7.1 CDS 14658169 14658273 14658169 ID=cds.MS.gene017961.t1;Parent=MS.gene017961.t1
chr7.1 exon 14656399 14656539 14656399 ID=MS.gene017961.t1.exon5;Parent=MS.gene017961.t1
chr7.1 CDS 14656399 14656539 14656399 ID=cds.MS.gene017961.t1;Parent=MS.gene017961.t1
chr7.1 exon 14655549 14655752 14655549 ID=MS.gene017961.t1.exon6;Parent=MS.gene017961.t1
chr7.1 CDS 14655549 14655752 14655549 ID=cds.MS.gene017961.t1;Parent=MS.gene017961.t1
chr7.1 exon 14655334 14655426 14655334 ID=MS.gene017961.t1.exon7;Parent=MS.gene017961.t1
chr7.1 CDS 14655334 14655426 14655334 ID=cds.MS.gene017961.t1;Parent=MS.gene017961.t1
chr7.1 exon 14655124 14655235 14655124 ID=MS.gene017961.t1.exon8;Parent=MS.gene017961.t1
chr7.1 CDS 14655124 14655235 14655124 ID=cds.MS.gene017961.t1;Parent=MS.gene017961.t1
chr7.1 exon 14654294 14654370 14654294 ID=MS.gene017961.t1.exon9;Parent=MS.gene017961.t1
chr7.1 CDS 14654294 14654370 14654294 ID=cds.MS.gene017961.t1;Parent=MS.gene017961.t1
Gene Sequence

>MS.gene017961

ATGACGGAACCACCACCCGAATCAGCACCGTCCACTCCACCACCGCCTCCAACATCAACCACCGTGATCCATCCACGTCGCGAACCTTTCGAACACGGTTTATTACCGATCCCAAAACTCATCTTCTCCGATCCCGCACAAACCCTAATCTCATTCAAACACAAGCTTCTAGAATCCTCTTCGAACAACCGAGTCGGCTCCGTTGCGATTTCCGAGTCGCTTCAGATCTCCGTTGAACAAGCGAAGCTCGTTCTCGATACTCTCGCTTCGGTTCTTCCTTCGGAGTCTGATTCCGAATCTGATAGTGTTGATGTGAATGATCTCATTTTGTTTCTTTATGTTCAATCCTATAAGAGGCTTCTGCCACGGACGCATAAGGATTCCGCCGCTGTAGCGGATGTCTGGCCTTCTACTTCCGCTTTTGATGGATACTTGTCCGCTCTCTCGCCGCTTCAGGTGAATGTGAATTCTCTTTGATAGGTTTAACGCAATTTCACGTGTTATTATGGAATAATGCATTGCTTAATTCATGTAATTATGGATTAAGTTATTGTGATTAGGATAATTTAATAGGAATCATTGTATTGGATTAGGTTTCTCAAGCTGCACTTGAGTTGCTAATTTGTTTGTAGCGATGCTATTTAAATTTCTGTATTGAGATGTTTATTGTTTAGGACTTTTTTTTCAACTTTTGAGTGGTTTTGTTGATTTGATGCTCCGAGAGTGTTGATTTGTTTCAGGTGAATTCTCCGTTTTCGTTCATCGATCTTTCAATGCACTTTCATTTGTTGTTATGGAACGTTGCATTACTTAATTCAAGTAATCATTGATTAATTTCTTGTGGTTAGGACAATTGAATGGGATTGGATTATGATTATTTAGCCTGCAATTTGAGTTACTAATTTGCTTGTAACGATGCTATTTTGTTTTTATATTGAGATGTTGACGATATTGTTTTGAGTATTTTTGTTGATTAGATGATCTGAGTGTTGATTTTGTTTTGAGTGATTTTCTTGTGGTTAGGATAATCGAATAGGAATCATTGGATTAGGTTTTTTTAGCAGGAATTTGAGTTACTAATTTGATTTGTTCGTAACGATGCTATTTTATTTATGTGTTTGAGATGTTTACGATTTTGTTTCAAGTGATATTTTGTTTTTATTTGATGTTGTGAAATTGCTGATTTTGGTTTTGGATGGTTTGTTGTAATTGCAGCTTGTGAGGAGCAACAGTAAGCGGTTTACGCCGTCGCAGGCTGATGAAGAAGCACATCAGTTGTCTTATCTGCAAAAGCACTTGGCTAACATTGTGTCTCTTCTAGCAGAGCCTGTGGAGGGGGAAAGTGAAGAATCTCTGGTTTGTTTGTTTACTGTTTGGCTTCCACGAGTTTCTGACTTTGGCCGATCACTTTATGTTTTTCGTAATATCAATGCCATCAATTTGTAAATAAAATTCGCTTGTAATTCAGTAACTGCATTATATTCGTAATTTTTGGGGTCAATTCTTGCAATTTATATGCTGTTTTGGTGAGATTCCATGGAAACCAAGAAGAGATGTTGAAATTTGAATGTAATGCAAAGTAGTTTATTTATCATTGTTATGTGCTTTTTTTTCTTTCTTTTTGGGTACAAGTACAACTGTTGCTTTTTAAGCTTTAGCTCTTGTGCAATGACCTCATTAAGATTTTGTAGTTTAATATGAATCAGAATAAGCATTTTAGTTTTTACCCTATTGTGTGCTCATTGCCAGTTATATGTCCAAACATGATGCTTTATGCATACATTGAACTCTGTAGGCATCAGTTGCTATAAATATGGACTTGATTGGTATCAATTTGTATCTCATTCATGTATGATTGCATCTTTGTATTCAGGAATTATGAATTTTCTCCTCTTAGTCAGCGAATCCAATCTTCTAGCCTAAAATCATGTGGTTTTTCAGAGGAAGGAAATTATAAGGAGCCTTTAGATAGATCTTGTGCTGTTTTTTCTTGAATACTGTTTCAGCAATTTATTTTCTATTCAGTCTTCAAATATTTATCTGTTTTTATTTTTGTTCTTAGTCCTACTATTATTTTGCTTATTTGATAGGTTTTAACCATGGATAGATTCGAGCACCTTGGTTTTCTATTTCAATATGGTGATAAAGGATCAGAGGGAAATTCTTTGAGTCAATCTTCTCCTTTTTTCGCAAACTCAGATCCTGACATGCCTGCTGTTCCCGTACCCGCTTCCCAAGTTCATGACTGGCTTCTACAGAACATAGCTTCTGCTTTGGAATATATTGCTGAACGGGCTTCTTCAAAAGAAAATGGTCCAGTTAGTGTCTCTGATCAGGATGTTGCAATGACTGATGCATCCACTGCCCCAGTTAAGGTCTCAACAAATGCTAGGGGTGCAAGTCTCATTGAAGGGATTTCTAAATCGTCATATGCGAAGCATGCATCTGACATTAAAGGTTCCTCTGTTAAGGTATGTCCCTTATATTTGTCTTTTTCTTGTATGTATATGTGTGTATATATATATTTTGAACATCAAAATTTATTAGATGATGAGAGAAGTACAAAGAGTATTTAACCCACAAACCGGGAAAAGTACAATGGGTGCTCACCCCACAAAAAACAAACACCTTACATTGAACATTAAGACATAGAAGAGGGTTAGAATACCATTCAAAATACATACAACTTGTATGTATTTACAAGGCACCCTTTTTTCCCTGGTATATTGTTGCTTTACTTTTAGATTATCTTAATATATCATCGAAGCAGTTGATACAAAGTGGGCTATTTACCCTTGATATTATTTTTCTTTTATGGCCGCTAATAGATGCTGTTGTATTACATGTAGGCATCTGCTTTTAATTGTAAATGAGTAGCTATGAAATACAGTTACTTGCTTTTGGATATTGTTCACATGCATTTTTCTTTTGAGAATTTTGAAATTTGGATCTGGTAGAGTTTGCCTGCTTTATTTCCGAACAAGTTATGTGCATGTTGATTTAGGTTCATAGTGCAAATATCATTCAAAGTACTAAATGCATGACCAGTCAGTAGTGGACATAATTTCTGCGGTATCCTGCACAGATCTAGTTGTCACTATGCATTAAAGGCTTGTAGATTGTGTTCTGGTTGGTCCTTTGGATTTGCAGAAGAAACCTACAGCAGACCCACATTGTGTTTGACCCGGACTTTGACCTTGGGCATGACAGATGTTTTACAGCATCAAGTTGCCTAGGAAAATTTCAACATCCTTTTGAACTTGGTTATTTGAAACAGATTTTAGATTAGACATATCCCTTCTTTAAAGCTTTGAAGATAGATGTTATACAATTAAATCCTTAAACGGTGAATTAGGGAAGAATGCATATATCTTTACTGTTAATCTTGCATAGCGGCGTGGACACCTGACCCCAAAACCGCTAAAGTGGTATAAACGATTGCAGGATGGCTGCTATTGTGAAGATCAGAAATAGTATATAGACTATACATTTTTCTCAATACTATACATATATACTCAATAATAGAAAAATACACAATTAAAAGGGTAACCACTAACCATACCTAATAATTATAACTGGCCTATATAATTTGTTGCTAACATTCAAAATAAGCATCCAATATAACTTAATTACCACTTCAAGTTCTAAAAGTATTCAAAATAACAAGTGATTTTTTTAAATAGAATCTCTATCAGAGAGTCTATTGTGTAGGGTGGTGGTTGGTCTTCACACATCATAGATTTGCAATGTCAAAAAACAGGGTTGAGAACCTAGAAACAAAGGCGAGAAAGGGTATAGAGCCTGAAAGTGACAGTCGCCGTCACAAACACAGTCAATGTCGCCAGCAAATGCTTCTGCCTGCCATTGCCGGAAACAAAGAGTCACGGTGCTAGCTTTGTACTTCACAGTTGTAGAAATGAAGAACAAAAACAAAGCGGCTCTTGTGTCTCTTTGTTTTTTTTTTCCCCATGACTGAGTGGGAAGAGATGTAGGGAAACTTAATCTTAAACTGGGAAAAGACAAAACATCCCTTTAAATTTTCAAAAGTGGATACATCGGAGGGTAAAAAAGAGCACCACAAACCCAAAATAGACAAATATAATCCATCAATATTTATGTTCCTTGAAAAGAGATGTCAAGTTTGATAATATTTGAACTTTTGTTCAAGTACCTCAGCACAGAACCAATATTCTTGTTCGTCTCTCAATTTGCTCGTTATGCATCTTATCTTGTGTTTTCTTGATATTATTCTCGATATAGATTTGCTAATAAAAATATTTGGTCATTGCAGGTTCTAAATTGCCATGAATCTGCCATTTACATCTTAGCACCTTTGAGATACGCCACCATCTATGGATGTTCAGATGCCACAATAGTCATTGGAGCAGTTGGAAAGGTAACAGCTAGTAACTTTTTGTCTTATATTTAAATGCAATTTAAATGCAACATAATGAGTCTATACATAATTACATACTACACAAACAACAATATGGAATTTGTCTTCCTTCCAGAATGAGTAAAATAATATGCAATTATCATATTTAATGGTAAGTTGATATACAAGGAAGATGATGCTGTTAGAGTACAGGAACAGTTCGGAATTAGAGGGGATAATTTGTATACAGAATAAGTAGTAGTAGACAGAGGCATTATGTACAGTTGGTATTGTGAGTGAAGGGAAAACTCTTGGGGGAATTCCATTCCCATTTCTTGTTCAATTTTGGTAATACACTGTTGTTATTTTGATTCTTCCTATTTTAATTCAATTTCTTGGTTCTTAACAATGGGTCTGGTTTGATATGATAATGTTCAGTGGGCTTTAAGCGAAAGAGATTTCTTATTCCTACATCTTTCTATTAGATACTGTCTTACCACTACTAAGCAGCGGTGAAAACTTCACACCTATATCATGGTAACCCAAAAAAAAAATGATACTGTCTTACCAATGGCAATTGTAGTATAATTACTGTAATCGTAGCTTCCATTGTATGATGGCTTGATTTGACAGATTGTTTTTCTCTTTCCATTTATTCATGCACTGCTGATAGGTTAGTAAGAAGATACCCGTGAGTGCAAGGAAATAAACATCAAGACTTTTAACAATATAAATATATTTCTATTTTAAATCCTCTTCACATATATGTGCATCTTATTATTTTTCTTGAAGATAGAATCTTAGTCTAGTCATGTATTGTGAATCCCATAGGAAGTGACAGAACCTCTGATGAATCAAATGGAAATGTTTATGCATGCAAGGTTGCCATTAGAATTATGTGTGTTTGGCTTTTTAATAGGTTAGGTACCTTTTTTATGCGCGCACACTCAAACATATTACTTATATACCTCTTCTCTCAAAGTGTACATATCTCTTTATCTATAAAAACTCTTAAATTATGATAAAGAGGTAAGTTAGTTCATGTTTAAATTAAGGGTCTCGCTAATGAGTGCCCCTGGGGCACTCTTTAAACATTCCAAAATAAGCAATTATTCTTTAAAAAAGTCACATTTTGATTTCCAATTCATTGAATACACGTCTTTTCATAAATAGTTACCACTTTGGGTTCTTAAAGAGTGCCCCTCCCCGGGGGCACTCGCTAGCATTTCCCTTAAATTAATAATGGAAATGGAAGTTATAGTTGGTTATCAATATGAAAGACTGTATGTTTAAATTAATAATGGAAATAGAAATTATGTTATCATAGAGGAATTAAGGACCCTCATAGTTCTTGAAGTGGTATTTTATTCCATGCCGTATTTCCCTTTTCGTGAATCTGTACAACGTCACTGACTGTACCAATGTCTGGTTGATATCAGTTCTAGAGTTCGTATGCATACAGTTTATAAATGATATGATATTAACGTTCTAATTTAGAAGATATGATATTAATTACTCATTGTGTTAAAGACCATGGTATACGTTATGCATATGGTGTTCGCTATGTTGAGTAAGATTTGGTAACTAGGATGCATTTTAGCTGGTGCTAATTTGGAAGGAGAGAAGTTGACTCCTCTTTTTCTTTGACAGGCTGTGAAAGTAGAACACTGTGAACGAGTTCATGTGATTGTAGCAGCTAAACGTATTTGTATTGCTAACTGCCGGGAATGTGTTTTCTTTTTGGGGGTGAACCAGCAACCCCTTATTGTCGGTGATAACCATAAGTTGCAGGTGAGCTTAATTTACCGTTTTTTGATATATGAAGTTGCTAGCCAGTTGTTATGAGATTCTAACCATGGAGTCTCTGATTATGTTTAGGGCTCATATGATGACACAAATGAAAATACGATATGATTATTTTGCGATGTATCTATGTGGCCTATCTGATATAACTCAGCACTGCAGAAGTGTTTAATACTGCTACTTTCTTGGTTATAGAGATTATAAATTTATACCGTTTTGACTGTTTTCGGAAATTTAACCTTTTCTGGGTTGCTGCTTACATAATGTCTAGAGTATTTGTCAGATGTCATGATTTCAATGCCATGATATCTTGATCATTTGGATGTCAGCTGCTGTTATTACTAATTTATTAGTTACTGCAAATATTGGGCAAGTATTTATAAAATCACTAGTACAATCAGATCACGTGATAGTAGCAACACATGAAATAAAATATTCAAATTGTAAGTTGGTCTGTTGGTGTGCTCTGATCTTGTTTGTTGATCGTACTTGTAGGCATATGACATGTTGCCTGAGCTTCTAGTATTTCGTTTATAGTACTGACTTGTTATAATGTATGTATATTTTTCTGTAAAGTCTCACTCTTCTCAAATGGATTCACTGTTTGTAAAATTTTCCCTCTTAATATTTACAGGTGGCTCCCTATAATACCTTTTACTCCCAGTTGGAGGAACATATGAATGAAGTTGGAGTTCTGCCCTCAGTGAATCGTTGGGATGAACCTATAGCATTGGGAATGGTTGATCCCCATGATTCACTATCTCATCCAGCGGGTGTCTCTGATGCTCAAGCTGAGTCTGCTGCTAGGGTGGACCCTGACCAGTTCACTAATTTTGTGGTATGAATGTCATTCTTTTATACTGACTTATGGGGAAAGTTAAGACTTCTTTTTAGATAAAGTCATATTTCTTTCTAAAGTGTCTAGTTACATGCTCATTTTCTGTCCATATTGTTGTGCAGATTCCAAACTGGCTTGAAGGAGAGTCCACCGGTTCTACTAAAGACAACCCTTTCACATTACCAGAGGGCTATATGGCATCTCAGCAAAGAAATGTATGCTACAGTTTCAATTGATAAGTGCATTGGAATTTGGATTTCTAAACTTTTTGGAATTATACTTTGTTTTGAATGAAATTCTATCTTCTCCACAGGAAAGAAATTTAGGGGAGATAAGGCAACTGTTACGTGAAGCACCTTTAGAAGAAAGTCGTAAACGAGAATTGTCATCTGCGCTTCATGTGTATTTCAAAGACTGGTTATATGGTAGCATTTTTTTCTTTCTTTCTTTCTTAATTGCCTTTGATTCTAACATGTTCGACTTTCACATCTACAAAGAATTCTCTAGCTTTGCATGTTAGATTTTGCATGTCCTTGAAAGTTGAATCCTGGACTTATTCTGTACCAACCTCTCTGTTTCTCTTGCAAATGTTGTGGAAATTTCTTTGGTACCTGTTATGCGGAACCTCCTACAATGGCACCTCCCACAATATTGATCATCGTGGTACCTGTTTCTCTAGCAAATGTTTTGTGGAACCTCCTACATATCAACCATTGAATTCTATGTCGAGTTTCATTCAACAATCACAACTGTCAATAATATATTATTACAATTGAACAGGGGTACCATGGAGTAATCCTTTTTTATTGATATTGCATGACCTTTTGGATGAAAGTTTTTAACATCTCGCATAACTCACGACTAATGATCTCTTTAAAGTCTTAATCAAGCGACCCTTTTTATTTTATCTTTTTTGATATCATATGTTTACTTAGCCATATTTTTGAACAAGAGTCAATGGTCATCGTTTCATTATTATCCAGTAACCCATAGCTTTTGATGGATTTAAGTTTTCTGTTCGTAAAGGAACCCCTCCCTGCATTCGGTTCTGCAGATTGATCGAGAGTTGCGTTGCTATGTTCCCTTAATCAATCATATGTTCTCCATGTTTATATCATTGGATGACATAAATTTCAGATACTTTACGGTTACACAATCTTTTTTTTTCTTGCTAACAGATGATGCTAAAAATTTGTTTTCTATTGTGACAGCCTCTGGTAACATTCGTCAGCTTTACTATCTACAAGGAGATTAA

Protein sequence

>MS.gene017961.t1

MTEPPPESAPSTPPPPPTSTTVIHPRREPFEHGLLPIPKLIFSDPAQTLISFKHKLLESSSNNRVGSVAISESLQISVEQAKLVLDTLASVLPSESDSESDSVDVNDLILFLYVQSYKRLLPRTHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSKRFTPSQADEEAHQLSYLQKHLANIVSLLAEPVEGESEESLVLTMDRFEHLGFLFQYGDKGSEGNSLSQSSPFFANSDPDMPAVPVPASQVHDWLLQNIASALEYIAERASSKENGPVSVSDQDVAMTDASTAPVKVSTNARGASLIEGISKSSYAKHASDIKGSSVKVLNCHESAIYILAPLRYATIYGCSDATIVIGAVGKAVKVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLIVGDNHKLQVAPYNTFYSQLEEHMNEVGVLPSVNRWDEPIALGMVDPHDSLSHPAGVSDAQAESAARVDPDQFTNFVIPNWLEGESTGSTKDNPFTLPEGYMASQQRNERNLGEIRQLLREAPLEESRKRELSSALHVYFKDWLYDDAKNLFSIVTASGNIRQLYYLQGD