Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017994.t1 | XP_003625268.2 | 99.5 | 388 | 2 | 0 | 1 | 388 | 3 | 390 | 1.90E-216 | 761.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017994.t1 | Q6ICY4 | 68.7 | 383 | 103 | 5 | 12 | 387 | 20 | 392 | 4.6e-139 | 495.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017994.t1 | G7KVE4 | 99.5 | 388 | 2 | 0 | 1 | 388 | 3 | 390 | 1.3e-216 | 761.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76034 | MS.gene017994 | PPI |
| MS.gene074258 | MS.gene017994 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017994.t1 | MTR_7g093290 | 99.485 | 388 | 2 | 0 | 1 | 388 | 3 | 390 | 0.0 | 791 |
| MS.gene017994.t1 | MTR_6g463330 | 33.813 | 139 | 91 | 1 | 89 | 227 | 408 | 545 | 1.96e-13 | 72.4 |
| MS.gene017994.t1 | MTR_6g463330 | 28.671 | 143 | 100 | 2 | 245 | 386 | 761 | 902 | 5.59e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017994.t1 | AT3G12100 | 68.668 | 383 | 103 | 5 | 12 | 387 | 20 | 392 | 0.0 | 525 |
| MS.gene017994.t1 | AT3G12100 | 66.148 | 257 | 70 | 5 | 12 | 261 | 20 | 266 | 9.27e-108 | 318 |
| MS.gene017994.t1 | AT2G04620 | 31.579 | 152 | 103 | 1 | 76 | 227 | 220 | 370 | 5.03e-17 | 83.2 |
| MS.gene017994.t1 | AT2G04620 | 31.579 | 152 | 103 | 1 | 76 | 227 | 388 | 538 | 6.26e-17 | 83.2 |
Find 85 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACTATGCTCGGATAAATT+TGG | 0.187667 | 7.4:-15558445 | MS.gene017994:CDS |
| CAGACCTAATACTTCGAAAA+AGG | 0.205988 | 7.4:+15561844 | None:intergenic |
| CCTGATGGAGATTATACTTA+TGG | 0.243883 | 7.4:-15560803 | MS.gene017994:CDS |
| TCTTCTCTCAACGGCGATTT+CGG | 0.244308 | 7.4:-15562101 | MS.gene017994:CDS |
| CTGGACCCAACCACCATTAT+TGG | 0.269709 | 7.4:-15561932 | MS.gene017994:CDS |
| CTTCAACCGATTCGGGTTTA+CGG | 0.271088 | 7.4:-15562001 | MS.gene017994:CDS |
| CATCGTCTATACCATGATTT+TGG | 0.273664 | 7.4:-15556379 | MS.gene017994:CDS |
| CATCGTGACAAGACCAATAA+TGG | 0.293626 | 7.4:+15561919 | None:intergenic |
| GATGCTGTTCACTTGACATT+TGG | 0.301424 | 7.4:-15560878 | MS.gene017994:CDS |
| TCATTGGTGTGTGGTTCTTC+AGG | 0.307178 | 7.4:-15558467 | MS.gene017994:CDS |
| TTGCCTCTCTTTAGGGCAAC+TGG | 0.323186 | 7.4:-15557843 | MS.gene017994:CDS |
| TCCACTCCTTCAACCGATTC+GGG | 0.327491 | 7.4:-15562008 | MS.gene017994:CDS |
| GGATGCTGGGAGGTGCCATT+TGG | 0.337721 | 7.4:+15557808 | None:intergenic |
| TTCCACTCCTTCAACCGATT+CGG | 0.339291 | 7.4:-15562009 | MS.gene017994:CDS |
| AATGCAGAAGTCTTGTGTTT+AGG | 0.352776 | 7.4:-15557897 | MS.gene017994:CDS |
| AGAAGAACCGAGAGTTTCTA+TGG | 0.361825 | 7.4:+15562118 | None:intergenic |
| TCTCAGTGCAGGTTTGATAT+TGG | 0.364805 | 7.4:-15558093 | MS.gene017994:intron |
| AGCATAGATATCCCTTCTTC+TGG | 0.390773 | 7.4:-15561951 | MS.gene017994:CDS |
| AATTTATTTGTGAATCTCAT+TGG | 0.391195 | 7.4:-15558483 | MS.gene017994:CDS |
| AACTATGCTCGGATAAATTT+GGG | 0.391539 | 7.4:-15558444 | MS.gene017994:intron |
| TCTACTGTTGAATTGCTCAT+TGG | 0.410378 | 7.4:-15561768 | MS.gene017994:CDS |
| CTGATGGAGATTATACTTAT+GGG | 0.433727 | 7.4:-15560802 | MS.gene017994:intron |
| TTCTGCTCATGAAGATGTAC+TGG | 0.434405 | 7.4:-15557246 | MS.gene017994:CDS |
| CGTAAACCCGAATCGGTTGA+AGG | 0.442925 | 7.4:+15562002 | None:intergenic |
| GTTCGAGGTTGTTGGAAAGA+AGG | 0.445812 | 7.4:+15562038 | None:intergenic |
| AAATCGGTGTTCGAGGTTGT+TGG | 0.448128 | 7.4:+15562030 | None:intergenic |
| CATTTGCTAAAAGCAGTAGT+TGG | 0.450229 | 7.4:+15557786 | None:intergenic |
| CAGGTTTGATATTGGCATCC+TGG | 0.454908 | 7.4:-15558085 | MS.gene017994:CDS |
| TCGGTTGAAGGAGTGGAAAT+CGG | 0.455514 | 7.4:+15562014 | None:intergenic |
| GAAGTATTAGGTCTGGTCAT+AGG | 0.462474 | 7.4:-15561836 | MS.gene017994:CDS |
| TTGCTCATTGGTCTCTTCAC+CGG | 0.479843 | 7.4:-15561756 | MS.gene017994:CDS |
| AAAAGCAGTAGTTGGGATGC+TGG | 0.480143 | 7.4:+15557794 | None:intergenic |
| ATTTGCTAAAAGCAGTAGTT+GGG | 0.484509 | 7.4:+15557787 | None:intergenic |
| CAAGACCAATAATGGTGGTT+GGG | 0.490442 | 7.4:+15561927 | None:intergenic |
| TGGTGGTTGGGTCCAGAAGA+AGG | 0.495909 | 7.4:+15561939 | None:intergenic |
| TTATGCTGTCAGGTTAAGAA+AGG | 0.500622 | 7.4:-15556433 | MS.gene017994:intron |
| TGGTGGTATCTTGCTCCAAA+TGG | 0.502367 | 7.4:-15557823 | MS.gene017994:CDS |
| CATCCTGGTTATTGTCCATA+GGG | 0.504757 | 7.4:-15558070 | MS.gene017994:intron |
| TTGGTGCCTGGTCATGTGGT+TGG | 0.504987 | 7.4:-15557197 | MS.gene017994:CDS |
| AGAAGAAGGGATATCTATGC+TGG | 0.507570 | 7.4:+15561953 | None:intergenic |
| GGGTTTCCGTAAACCCGAAT+CGG | 0.508942 | 7.4:+15561995 | None:intergenic |
| CGATGCACAAATTCTAGTAT+TGG | 0.510977 | 7.4:+15556397 | None:intergenic |
| CATGAAGGGCTTCAACTGCT+AGG | 0.515711 | 7.4:+15559074 | None:intergenic |
| CGTCTTGTATAAACGCATGA+AGG | 0.519121 | 7.4:+15559059 | None:intergenic |
| GCATCCTGGTTATTGTCCAT+AGG | 0.520596 | 7.4:-15558071 | MS.gene017994:CDS |
| GGAATCAGTTCGTGAAAGGA+AGG | 0.527058 | 7.4:+15561974 | None:intergenic |
| GAGAGTTTCTATGGCTTCCA+TGG | 0.530369 | 7.4:+15562127 | None:intergenic |
| ACCCGAATCGGTTGAAGGAG+TGG | 0.532916 | 7.4:+15562007 | None:intergenic |
| AAAGCAGTAGTTGGGATGCT+GGG | 0.534223 | 7.4:+15557795 | None:intergenic |
| AGCGAAGCGACGATCGTTGG+CGG | 0.534688 | 7.4:+15562073 | None:intergenic |
| CCATAAGTATAATCTCCATC+AGG | 0.546355 | 7.4:+15560803 | None:intergenic |
| TATGCTGTCAGGTTAAGAAA+GGG | 0.547617 | 7.4:-15556432 | MS.gene017994:intron |
| GGTCTTGCACGCCAAAATCA+TGG | 0.548113 | 7.4:+15556368 | None:intergenic |
| TTAAGAAAGGGGTCGATGAT+CGG | 0.548376 | 7.4:-15556420 | MS.gene017994:CDS |
| GGAGTGGAAATCGGTGTTCG+AGG | 0.549698 | 7.4:+15562023 | None:intergenic |
| TTCTTACAGATTCCATTCGC+AGG | 0.551004 | 7.4:-15558243 | MS.gene017994:intron |
| GTTCACTTGACATTTGGATG+CGG | 0.552917 | 7.4:-15560872 | MS.gene017994:CDS |
| TGCTGGAATCAGTTCGTGAA+AGG | 0.558368 | 7.4:+15561970 | None:intergenic |
| ACAAGACCAATAATGGTGGT+TGG | 0.559008 | 7.4:+15561926 | None:intergenic |
| GGTCTCTTCACCGGTCGTGT+TGG | 0.560378 | 7.4:-15561747 | MS.gene017994:intron |
| ATGAAGGGCTTCAACTGCTA+GGG | 0.561027 | 7.4:+15559075 | None:intergenic |
| TTTGATCTTACCAACACGAC+CGG | 0.561384 | 7.4:+15561737 | None:intergenic |
| AGATGTACTGGATGTCTCCC+AGG | 0.572061 | 7.4:-15557234 | MS.gene017994:CDS |
| GGAATTGGTGCCTGGTCATG+TGG | 0.575515 | 7.4:-15557201 | MS.gene017994:CDS |
| TGGAATCTGTAAGAACATGC+AGG | 0.582813 | 7.4:+15558251 | None:intergenic |
| GGTGGTTGGGTCCAGAAGAA+GGG | 0.587595 | 7.4:+15561940 | None:intergenic |
| GGTTCTTCAGGAACTATGCT+CGG | 0.588987 | 7.4:-15558455 | MS.gene017994:CDS |
| TTTAGGACTTGTTTCTGTTG+CGG | 0.589382 | 7.4:-15557880 | MS.gene017994:CDS |
| GTCTTGTATAAACGCATGAA+GGG | 0.590052 | 7.4:+15559060 | None:intergenic |
| TTGTGAATCTCATTGGTGTG+TGG | 0.590838 | 7.4:-15558476 | MS.gene017994:CDS |
| AAAAGCGAAGCGACGATCGT+TGG | 0.591248 | 7.4:+15562070 | None:intergenic |
| CCTCTCTTTAGGGCAACTGG+TGG | 0.594507 | 7.4:-15557840 | MS.gene017994:CDS |
| AGTGAACCAACCACATGACC+AGG | 0.597471 | 7.4:+15557191 | None:intergenic |
| CCACCAGTTGCCCTAAAGAG+AGG | 0.605492 | 7.4:+15557840 | None:intergenic |
| CAAGCATATCTACCTGCGAA+TGG | 0.606662 | 7.4:+15558231 | None:intergenic |
| GGTTGGTTCACTGTCAATGC+AGG | 0.613231 | 7.4:-15557180 | MS.gene017994:intron |
| GAATCAGTTCGTGAAAGGAA+GGG | 0.621204 | 7.4:+15561975 | None:intergenic |
| ATGGAAGCCATAGAAACTCT+CGG | 0.629202 | 7.4:-15562125 | MS.gene017994:CDS |
| ATGCTGTCAGGTTAAGAAAG+GGG | 0.646498 | 7.4:-15556431 | MS.gene017994:intron |
| TTACCCTATGGACAATAACC+AGG | 0.658338 | 7.4:+15558067 | None:intergenic |
| CGTGACAAGACCAATAATGG+TGG | 0.685380 | 7.4:+15561922 | None:intergenic |
| ACTCTCGGTTCTTCTCTCAA+CGG | 0.690084 | 7.4:-15562110 | MS.gene017994:CDS |
| CATGATCAATCTGCACCGTG+AGG | 0.694004 | 7.4:+15556347 | None:intergenic |
| GCAGTAGTTGGGATGCTGGG+AGG | 0.699016 | 7.4:+15557798 | None:intergenic |
| GAACATGCAGGAAAACAGAG+TGG | 0.717819 | 7.4:+15558263 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTGAAAATCATATTC+AGG | + | chr7.4:15561938-15561957 | None:intergenic | 15.0% |
| !! | ATTACAATAAATGAAGAAAT+CGG | + | chr7.4:15560513-15560532 | None:intergenic | 15.0% |
| !! | GTGATTATATTATATATATC+AGG | + | chr7.4:15561059-15561078 | None:intergenic | 15.0% |
| !!! | TTCTAAATATCTAAAACAAT+AGG | + | chr7.4:15559527-15559546 | None:intergenic | 15.0% |
| !!! | TTTTGTTTCCTTTTTTAATA+GGG | - | chr7.4:15560542-15560561 | MS.gene017994:intron | 15.0% |
| !!! | TTTTTGTTTCCTTTTTTAAT+AGG | - | chr7.4:15560541-15560560 | MS.gene017994:intron | 15.0% |
| !! | AAAATTCTAGCCATTTATAA+CGG | + | chr7.4:15559728-15559747 | None:intergenic | 20.0% |
| !! | AATCATTTCAATCATGTTTA+TGG | - | chr7.4:15558131-15558150 | MS.gene017994:intron | 20.0% |
| !! | AATTTATTTGTGAATCTCAT+TGG | - | chr7.4:15559984-15560003 | MS.gene017994:intron | 20.0% |
| !! | ATAAAATAGATGATAACTAC+CGG | + | chr7.4:15557849-15557868 | None:intergenic | 20.0% |
| !! | CATTATCTAGAAATTTGAAA+AGG | + | chr7.4:15560912-15560931 | None:intergenic | 20.0% |
| !! | GATATTTAGTATGATTTCTT+TGG | + | chr7.4:15559691-15559710 | None:intergenic | 20.0% |
| !! | TAACTGTTTAATTATGTTAG+CGG | - | chr7.4:15558842-15558861 | MS.gene017994:intron | 20.0% |
| !! | TTACAATAAATGAAGAAATC+GGG | + | chr7.4:15560512-15560531 | None:intergenic | 20.0% |
| !! | TTTATATTTCAACTTGGATT+TGG | + | chr7.4:15561796-15561815 | None:intergenic | 20.0% |
| !!! | AAATTTTGTTTCTTTCATCA+GGG | - | chr7.4:15559830-15559849 | MS.gene017994:intron | 20.0% |
| !!! | AAGTTTTTTCAAATACTTAC+AGG | - | chr7.4:15557480-15557499 | MS.gene017994:intron | 20.0% |
| !!! | ACTTATTTTCATAGCTTATT+TGG | + | chr7.4:15557410-15557429 | None:intergenic | 20.0% |
| !!! | AGTGTTTTTATATTTCAACT+TGG | + | chr7.4:15561802-15561821 | None:intergenic | 20.0% |
| !!! | ATAATTTGTTTATCCAAACA+GGG | - | chr7.4:15557255-15557274 | MS.gene017994:intron | 20.0% |
| !!! | ATTAGCTCTTACAAAAATTA+CGG | + | chr7.4:15561477-15561496 | None:intergenic | 20.0% |
| !!! | ATTTAGCTGTATTTTATCTA+TGG | - | chr7.4:15557180-15557199 | MS.gene017994:intron | 20.0% |
| !!! | ATTTTCAATTTTTGCAGTAT+TGG | - | chr7.4:15561945-15561964 | MS.gene017994:CDS | 20.0% |
| !!! | ATTTTGATGTGTAAAGTATT+AGG | - | chr7.4:15557772-15557791 | MS.gene017994:intron | 20.0% |
| !!! | TAAATTTTGTTTCTTTCATC+AGG | - | chr7.4:15559829-15559848 | MS.gene017994:intron | 20.0% |
| !!! | TATAATTTGTTTATCCAAAC+AGG | - | chr7.4:15557254-15557273 | MS.gene017994:intron | 20.0% |
| !!! | TATTTAACAAAATTAGCTTC+TGG | - | chr7.4:15559640-15559659 | MS.gene017994:intron | 20.0% |
| !!! | TGTTTTTCATTCTATCAATT+TGG | - | chr7.4:15559879-15559898 | MS.gene017994:intron | 20.0% |
| ! | AAATAAAGTTTATGTGCAAG+TGG | + | chr7.4:15561029-15561048 | None:intergenic | 25.0% |
| ! | AAATTCTAGCCATTTATAAC+GGG | + | chr7.4:15559727-15559746 | None:intergenic | 25.0% |
| ! | AAGCAAATAGCAACATTAAA+GGG | + | chr7.4:15559159-15559178 | None:intergenic | 25.0% |
| ! | ACATATTGAATTTCCTTCTT+TGG | - | chr7.4:15559328-15559347 | MS.gene017994:intron | 25.0% |
| ! | ATAAGTTCTGTTAGATTGTT+TGG | - | chr7.4:15557118-15557137 | MS.gene017994:intron | 25.0% |
| ! | ATACAACACATGCTTAATTA+AGG | - | chr7.4:15557057-15557076 | MS.gene017994:intron | 25.0% |
| ! | ATCAAGCTTATATACTTCAA+TGG | - | chr7.4:15560349-15560368 | MS.gene017994:intron | 25.0% |
| ! | ATTATATTGAAATTGCTCTC+TGG | - | chr7.4:15560948-15560967 | MS.gene017994:intron | 25.0% |
| ! | ATTCTCAACCCTATTAAAAA+AGG | + | chr7.4:15560553-15560572 | None:intergenic | 25.0% |
| ! | CACATAATTGTACATACAAA+TGG | + | chr7.4:15557731-15557750 | None:intergenic | 25.0% |
| ! | CTCAAACTTGACTAATTATT+AGG | - | chr7.4:15561364-15561383 | MS.gene017994:intron | 25.0% |
| ! | GTATGTTATTGTCATACATT+TGG | + | chr7.4:15560279-15560298 | None:intergenic | 25.0% |
| ! | TAAGCAAATAGCAACATTAA+AGG | + | chr7.4:15559160-15559179 | None:intergenic | 25.0% |
| ! | TAAGTACTTGCGTTAATATT+TGG | - | chr7.4:15558477-15558496 | MS.gene017994:CDS | 25.0% |
| ! | TAAGTTCTGTTAGATTGTTT+GGG | - | chr7.4:15557119-15557138 | MS.gene017994:intron | 25.0% |
| ! | TACAACACATGCTTAATTAA+GGG | - | chr7.4:15557058-15557077 | MS.gene017994:intron | 25.0% |
| ! | TACTGCTATTATTTACTCTT+TGG | - | chr7.4:15558106-15558125 | MS.gene017994:intron | 25.0% |
| ! | TATGTTTGGATAAACAACTT+AGG | + | chr7.4:15557281-15557300 | None:intergenic | 25.0% |
| ! | TGAAGCTATTATTTACTGTT+TGG | - | chr7.4:15558047-15558066 | MS.gene017994:intron | 25.0% |
| ! | TTCTAGATAATGCAAATGTT+GGG | - | chr7.4:15560920-15560939 | MS.gene017994:intron | 25.0% |
| ! | TTTCTAGATAATGCAAATGT+TGG | - | chr7.4:15560919-15560938 | MS.gene017994:intron | 25.0% |
| !! | AACCAATTCAAGTTAATACA+AGG | + | chr7.4:15558244-15558263 | None:intergenic | 25.0% |
| !! | ACTAACTTGTAATGTACAAT+GGG | - | chr7.4:15560820-15560839 | MS.gene017994:CDS | 25.0% |
| !! | ATTTATAACTATGCCTTTTC+AGG | - | chr7.4:15557556-15557575 | MS.gene017994:intron | 25.0% |
| !! | GAAAAATAATGAGCTCTAAT+TGG | - | chr7.4:15558629-15558648 | MS.gene017994:intron | 25.0% |
| !! | TACCTTGTATTAACTTGAAT+TGG | - | chr7.4:15558239-15558258 | MS.gene017994:intron | 25.0% |
| !! | TAGGAAATGCATTTTGTTAA+AGG | - | chr7.4:15559257-15559276 | MS.gene017994:intron | 25.0% |
| !! | TATTGGCTATTGAGTTTAAA+GGG | + | chr7.4:15558691-15558710 | None:intergenic | 25.0% |
| !! | TTATTGGCTATTGAGTTTAA+AGG | + | chr7.4:15558692-15558711 | None:intergenic | 25.0% |
| !! | TTTAAGATTCCCGTTATAAA+TGG | - | chr7.4:15559715-15559734 | MS.gene017994:intron | 25.0% |
| !! | TTTCTGTTTCTTTCTCAAAT+TGG | - | chr7.4:15560877-15560896 | MS.gene017994:CDS | 25.0% |
| !! | TTTTCTAATACTAGTTGTAG+CGG | + | chr7.4:15561342-15561361 | None:intergenic | 25.0% |
| !!! | AAAAAATATGGCTTTGTCTA+TGG | - | chr7.4:15561412-15561431 | MS.gene017994:intron | 25.0% |
| !!! | AATTTTGTTTCTTTCATCAG+GGG | - | chr7.4:15559831-15559850 | MS.gene017994:intron | 25.0% |
| !!! | ACGTTTTCTTTGTTTGTTAT+GGG | - | chr7.4:15557625-15557644 | MS.gene017994:intron | 25.0% |
| !!! | AGACAAAGCCATATTTTTTA+GGG | + | chr7.4:15561411-15561430 | None:intergenic | 25.0% |
| !!! | ATGAAAAAGTATTTACCCTA+TGG | + | chr7.4:15560415-15560434 | None:intergenic | 25.0% |
| !!! | ATGTTTATGGTTTTACTTTC+AGG | - | chr7.4:15558144-15558163 | MS.gene017994:intron | 25.0% |
| !!! | TAACTTGTTCAAGAAATTCA+AGG | + | chr7.4:15561741-15561760 | None:intergenic | 25.0% |
| !!! | TAGACAAAGCCATATTTTTT+AGG | + | chr7.4:15561412-15561431 | None:intergenic | 25.0% |
| AAATGCATTTCCTATGTGAA+AGG | + | chr7.4:15559251-15559270 | None:intergenic | 30.0% | |
| AACTATGCTCGGATAAATTT+GGG | - | chr7.4:15560023-15560042 | MS.gene017994:intron | 30.0% | |
| AAGAAATGCATCGAAATTGA+AGG | + | chr7.4:15560309-15560328 | None:intergenic | 30.0% | |
| AAGATAGAAAAACTCAGAGA+AGG | + | chr7.4:15561504-15561523 | None:intergenic | 30.0% | |
| AAGATATATTCCAGAAGAGA+TGG | + | chr7.4:15560152-15560171 | None:intergenic | 30.0% | |
| AAGATGTCAAATTGAATCTC+TGG | - | chr7.4:15557522-15557541 | MS.gene017994:intron | 30.0% | |
| AATCATTTGAGTCCAGTTTA+TGG | - | chr7.4:15558072-15558091 | MS.gene017994:CDS | 30.0% | |
| AGAAATGCATCGAAATTGAA+GGG | + | chr7.4:15560308-15560327 | None:intergenic | 30.0% | |
| AGACCTAATACTTCGAAAAA+GGG | + | chr7.4:15556625-15556644 | None:intergenic | 30.0% | |
| AGATAGAAAAACTCAGAGAA+GGG | + | chr7.4:15561503-15561522 | None:intergenic | 30.0% | |
| AGCAAATAGCAACATTAAAG+GGG | + | chr7.4:15559158-15559177 | None:intergenic | 30.0% | |
| AGTTGTCTCTCTAATCAAAA+TGG | + | chr7.4:15558801-15558820 | None:intergenic | 30.0% | |
| ATAAATGAAGAAATCGGGTT+AGG | + | chr7.4:15560507-15560526 | None:intergenic | 30.0% | |
| ATAAATGGTCAAGGCTTAAA+AGG | + | chr7.4:15560129-15560148 | None:intergenic | 30.0% | |
| ATAAGCTAAGCATGACTTAT+TGG | + | chr7.4:15558708-15558727 | None:intergenic | 30.0% | |
| ATAAGTTCTTAGGCTATGTT+TGG | + | chr7.4:15557295-15557314 | None:intergenic | 30.0% | |
| ATAATCACTAATCCAATCTC+AGG | - | chr7.4:15561071-15561090 | MS.gene017994:intron | 30.0% | |
| ATTGCAATAGCAAAACAGAA+TGG | + | chr7.4:15559297-15559316 | None:intergenic | 30.0% | |
| CCTAAATGCTATTACAAAAG+TGG | + | chr7.4:15558588-15558607 | None:intergenic | 30.0% | |
| CTGATGGAGATTATACTTAT+GGG | - | chr7.4:15557665-15557684 | MS.gene017994:intron | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+TGG | - | chr7.4:15558909-15558928 | MS.gene017994:intron | 30.0% | |
| GTTGTCTCTCTAATCAAAAT+GGG | + | chr7.4:15558800-15558819 | None:intergenic | 30.0% | |
| TAAAAGCTATCCTTTCACAT+AGG | - | chr7.4:15559238-15559257 | MS.gene017994:intron | 30.0% | |
| TAATCACTAATCCAATCTCA+GGG | - | chr7.4:15561072-15561091 | MS.gene017994:intron | 30.0% | |
| TACATTTGGACAATGATAGA+CGG | + | chr7.4:15560265-15560284 | None:intergenic | 30.0% | |
| TCTAATCAAAATGGGAATGA+GGG | + | chr7.4:15558792-15558811 | None:intergenic | 30.0% | |
| TCTTTCAATTGAAGAATCGA+AGG | + | chr7.4:15561565-15561584 | None:intergenic | 30.0% | |
| TTAATCTGTCATGAATATCG+AGG | + | chr7.4:15559119-15559138 | None:intergenic | 30.0% | |
| TTTAGAAAATTGTGCCAAGA+TGG | - | chr7.4:15559540-15559559 | MS.gene017994:intron | 30.0% | |
| ! | ACAATTTGAAATCCAGACAA+TGG | + | chr7.4:15557959-15557978 | None:intergenic | 30.0% |
| ! | ATTTGCTAAAAGCAGTAGTT+GGG | + | chr7.4:15560683-15560702 | None:intergenic | 30.0% |
| ! | CAATTTGAAATCCAGACAAT+GGG | + | chr7.4:15557958-15557977 | None:intergenic | 30.0% |
| ! | GACTAACTTGTAATGTACAA+TGG | - | chr7.4:15560819-15560838 | MS.gene017994:CDS | 30.0% |
| ! | GCATTTTCTATGTTTCAAAC+TGG | - | chr7.4:15560083-15560102 | MS.gene017994:intron | 30.0% |
| ! | TGAATCTTTTGTGAGGTTTA+GGG | - | chr7.4:15558417-15558436 | MS.gene017994:intron | 30.0% |
| ! | TGCTATTTGCTTAAGATATC+AGG | - | chr7.4:15559167-15559186 | MS.gene017994:intron | 30.0% |
| !! | AAAGGAAGTATCAAAATTCG+AGG | + | chr7.4:15560111-15560130 | None:intergenic | 30.0% |
| !! | AATTGTTTGCTACTTTGCTT+AGG | - | chr7.4:15556802-15556821 | MS.gene017994:intron | 30.0% |
| !! | CACGTTTTCTTTGTTTGTTA+TGG | - | chr7.4:15557624-15557643 | MS.gene017994:intron | 30.0% |
| !! | CCACTTTTGTAATAGCATTT+AGG | - | chr7.4:15558585-15558604 | MS.gene017994:intron | 30.0% |
| !! | TGTACAGCTTTGAAAATTCT+AGG | + | chr7.4:15561622-15561641 | None:intergenic | 30.0% |
| !! | TTTTGATTGGATACTTCTTC+CGG | - | chr7.4:15557817-15557836 | MS.gene017994:CDS | 30.0% |
| !!! | TAGGTCAATTCTTTTTTTGC+TGG | + | chr7.4:15559508-15559527 | None:intergenic | 30.0% |
| !!! | TTTTTGCAGTATTGGTAGTA+TGG | - | chr7.4:15561953-15561972 | MS.gene017994:CDS | 30.0% |
| !!! | TTTTTTTTCTTCCCATTGTC+TGG | - | chr7.4:15557944-15557963 | MS.gene017994:intron | 30.0% |
| AAAGCTTGTCAGTGTTTATG+AGG | + | chr7.4:15557361-15557380 | None:intergenic | 35.0% | |
| AAGAGATGGATAAATGGTCA+AGG | + | chr7.4:15560138-15560157 | None:intergenic | 35.0% | |
| AAGCTACATAATCACTTACC+AGG | - | chr7.4:15561001-15561020 | MS.gene017994:intron | 35.0% | |
| AATACTAGTTGTAGCGGTAA+AGG | + | chr7.4:15561336-15561355 | None:intergenic | 35.0% | |
| AATCACTAATCCAATCTCAG+GGG | - | chr7.4:15561073-15561092 | MS.gene017994:intron | 35.0% | |
| ACACATAGATATGTGTGCTA+GGG | + | chr7.4:15557891-15557910 | None:intergenic | 35.0% | |
| ACATCAGTAAAGCCATAAAC+TGG | + | chr7.4:15558087-15558106 | None:intergenic | 35.0% | |
| AGCTACATAATCACTTACCA+GGG | - | chr7.4:15561002-15561021 | MS.gene017994:intron | 35.0% | |
| ATACTAGTTGTAGCGGTAAA+GGG | + | chr7.4:15561335-15561354 | None:intergenic | 35.0% | |
| ATAGAAAAACTCAGAGAAGG+GGG | + | chr7.4:15561501-15561520 | None:intergenic | 35.0% | |
| ATCACAGGGATTAAAGAACA+TGG | + | chr7.4:15558342-15558361 | None:intergenic | 35.0% | |
| ATTGTCAAGAAGGAAACCAA+AGG | + | chr7.4:15561708-15561727 | None:intergenic | 35.0% | |
| CAGACCTAATACTTCGAAAA+AGG | + | chr7.4:15556626-15556645 | None:intergenic | 35.0% | |
| CCATAAGTATAATCTCCATC+AGG | + | chr7.4:15557667-15557686 | None:intergenic | 35.0% | |
| CCTGATGGAGATTATACTTA+TGG | - | chr7.4:15557664-15557683 | MS.gene017994:intron | 35.0% | |
| CGATGCACAAATTCTAGTAT+TGG | + | chr7.4:15562073-15562092 | None:intergenic | 35.0% | |
| CGCATTAACAGGTTTCAAAT+TGG | + | chr7.4:15561155-15561174 | None:intergenic | 35.0% | |
| CTAAACCTCACAAAAGATTC+AGG | + | chr7.4:15558418-15558437 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | + | chr7.4:15559095-15559114 | None:intergenic | 35.0% | |
| CTACGGTACTTCATCTTTAT+AGG | + | chr7.4:15561862-15561881 | None:intergenic | 35.0% | |
| CTCTAATCAAAATGGGAATG+AGG | + | chr7.4:15558793-15558812 | None:intergenic | 35.0% | |
| CTTGTGCAAGATAAGTTCTT+AGG | + | chr7.4:15557305-15557324 | None:intergenic | 35.0% | |
| GAAATGCATCGAAATTGAAG+GGG | + | chr7.4:15560307-15560326 | None:intergenic | 35.0% | |
| GAACTATGCTCGGATAAATT+TGG | - | chr7.4:15560022-15560041 | MS.gene017994:intron | 35.0% | |
| GAGAAGAGTTTATAAAGTGG+AGG | - | chr7.4:15558912-15558931 | MS.gene017994:intron | 35.0% | |
| GAGTTAATGACATGATGAAG+TGG | - | chr7.4:15558607-15558626 | MS.gene017994:intron | 35.0% | |
| GATAGAAAAACTCAGAGAAG+GGG | + | chr7.4:15561502-15561521 | None:intergenic | 35.0% | |
| GTCCACAACCCTAAAAAATA+TGG | - | chr7.4:15561400-15561419 | MS.gene017994:intron | 35.0% | |
| GTCTTGTATAAACGCATGAA+GGG | + | chr7.4:15559410-15559429 | None:intergenic | 35.0% | |
| TATGCTGTCAGGTTAAGAAA+GGG | - | chr7.4:15562035-15562054 | MS.gene017994:CDS | 35.0% | |
| TCCAAACAAATTGCAGAGAA+GGG | + | chr7.4:15560777-15560796 | None:intergenic | 35.0% | |
| TCTACACAAGAAACCAAAGA+AGG | + | chr7.4:15559344-15559363 | None:intergenic | 35.0% | |
| TCTACTGTTGAATTGCTCAT+TGG | - | chr7.4:15556699-15556718 | MS.gene017994:intron | 35.0% | |
| TGAACAAGTTACTCAGTCTT+GGG | - | chr7.4:15561750-15561769 | MS.gene017994:CDS | 35.0% | |
| TGCTTAATTAAGGGTCTGTT+TGG | - | chr7.4:15557067-15557086 | MS.gene017994:intron | 35.0% | |
| TTATGCTGTCAGGTTAAGAA+AGG | - | chr7.4:15562034-15562053 | MS.gene017994:CDS | 35.0% | |
| TTCCAGAAGAGATGGATAAA+TGG | + | chr7.4:15560144-15560163 | None:intergenic | 35.0% | |
| TTGAACAAGTTACTCAGTCT+TGG | - | chr7.4:15561749-15561768 | MS.gene017994:CDS | 35.0% | |
| ! | AATCTTTTGTGAGGTTTAGG+GGG | - | chr7.4:15558419-15558438 | MS.gene017994:intron | 35.0% |
| ! | AATGCAGAAGTCTTGTGTTT+AGG | - | chr7.4:15560570-15560589 | MS.gene017994:intron | 35.0% |
| ! | ACAAAATTAGCTTCTGGAGA+AGG | - | chr7.4:15559646-15559665 | MS.gene017994:intron | 35.0% |
| ! | AGTGTAAACCAGTTTTACAC+TGG | + | chr7.4:15558658-15558677 | None:intergenic | 35.0% |
| ! | ATATCAGGTACTGTTGGTAA+AGG | - | chr7.4:15559182-15559201 | MS.gene017994:intron | 35.0% |
| ! | ATGTGTAAAGTATTAGGCTG+TGG | - | chr7.4:15557778-15557797 | MS.gene017994:CDS | 35.0% |
| ! | ATTGGTCTATGTCTCAAATC+AGG | - | chr7.4:15558389-15558408 | MS.gene017994:intron | 35.0% |
| ! | CATCGTCTATACCATGATTT+TGG | - | chr7.4:15562088-15562107 | MS.gene017994:CDS | 35.0% |
| ! | CATTTGCTAAAAGCAGTAGT+TGG | + | chr7.4:15560684-15560703 | None:intergenic | 35.0% |
| ! | CTGAATCTTTTGTGAGGTTT+AGG | - | chr7.4:15558416-15558435 | MS.gene017994:intron | 35.0% |
| ! | CTTAAGATATCAGGTACTGT+TGG | - | chr7.4:15559176-15559195 | MS.gene017994:intron | 35.0% |
| ! | GAATCTTTTGTGAGGTTTAG+GGG | - | chr7.4:15558418-15558437 | MS.gene017994:intron | 35.0% |
| ! | TATAACGGGAATCTTAAAGC+AGG | + | chr7.4:15559713-15559732 | None:intergenic | 35.0% |
| ! | TGTAAATTGATGACAGCATC+AGG | + | chr7.4:15558268-15558287 | None:intergenic | 35.0% |
| ! | TGTGTAAAGTATTAGGCTGT+GGG | - | chr7.4:15557779-15557798 | MS.gene017994:CDS | 35.0% |
| ! | TTTTAGCAAATGCTTGAGAC+AGG | - | chr7.4:15560692-15560711 | MS.gene017994:intron | 35.0% |
| !! | AATCTTTTTGATGACCCAGA+AGG | + | chr7.4:15556579-15556598 | None:intergenic | 35.0% |
| !! | GAGAATCCATTATTTTGCCA+GGG | - | chr7.4:15558558-15558577 | MS.gene017994:intron | 35.0% |
| !! | TGAGAATCCATTATTTTGCC+AGG | - | chr7.4:15558557-15558576 | MS.gene017994:intron | 35.0% |
| !! | TTTAGGACTTGTTTCTGTTG+CGG | - | chr7.4:15560587-15560606 | MS.gene017994:intron | 35.0% |
| !!! | AGCCATATTTTTTAGGGTTG+TGG | + | chr7.4:15561405-15561424 | None:intergenic | 35.0% |
| !!! | CTTTTTCGAAGTATTAGGTC+TGG | - | chr7.4:15556624-15556643 | MS.gene017994:intron | 35.0% |
| !!! | TCTTGTTTTGCCTCTCTTTA+GGG | - | chr7.4:15560617-15560636 | MS.gene017994:intron | 35.0% |
| !!! | TGTCCCTTTTTCGAAGTATT+AGG | - | chr7.4:15556619-15556638 | MS.gene017994:intron | 35.0% |
| !!! | TTCTTGTTTTGCCTCTCTTT+AGG | - | chr7.4:15560616-15560635 | MS.gene017994:intron | 35.0% |
| AAAGGAAAACCTCCTATGCA+CGG | + | chr7.4:15561690-15561709 | None:intergenic | 40.0% | |
| AAGCTCTCTATGATAGCTTG+TGG | - | chr7.4:15556875-15556894 | MS.gene017994:intron | 40.0% | |
| AATCAAAATCCGTGCATAGG+AGG | - | chr7.4:15561678-15561697 | MS.gene017994:intron | 40.0% | |
| ACAAGACCAATAATGGTGGT+TGG | + | chr7.4:15556544-15556563 | None:intergenic | 40.0% | |
| AGAAGAACCGAGAGTTTCTA+TGG | + | chr7.4:15556352-15556371 | None:intergenic | 40.0% | |
| AGAAGAAGGGATATCTATGC+TGG | + | chr7.4:15556517-15556536 | None:intergenic | 40.0% | |
| AGAATCCTATCTATCCGATG+TGG | + | chr7.4:15558891-15558910 | None:intergenic | 40.0% | |
| AGCATAGATATCCCTTCTTC+TGG | - | chr7.4:15556516-15556535 | MS.gene017994:intron | 40.0% | |
| ATACCATGTCGTGAATATCG+AGG | + | chr7.4:15558978-15558997 | None:intergenic | 40.0% | |
| ATACTTCTTCCGGAAATAGC+CGG | - | chr7.4:15557827-15557846 | MS.gene017994:CDS | 40.0% | |
| ATCGAAGGAATAGTACACTG+AGG | + | chr7.4:15561550-15561569 | None:intergenic | 40.0% | |
| ATGCTGTCAGGTTAAGAAAG+GGG | - | chr7.4:15562036-15562055 | MS.gene017994:CDS | 40.0% | |
| ATGGAAGCCATAGAAACTCT+CGG | - | chr7.4:15556342-15556361 | MS.gene017994:CDS | 40.0% | |
| ATTGGATGCCAGTGTAAAAC+TGG | - | chr7.4:15558647-15558666 | MS.gene017994:intron | 40.0% | |
| CAAGACCAATAATGGTGGTT+GGG | + | chr7.4:15556543-15556562 | None:intergenic | 40.0% | |
| CAGCTTATGCAGAACTTATG+TGG | - | chr7.4:15558760-15558779 | MS.gene017994:intron | 40.0% | |
| CATCCTGGTTATTGTCCATA+GGG | - | chr7.4:15560397-15560416 | MS.gene017994:intron | 40.0% | |
| CATCGTGACAAGACCAATAA+TGG | + | chr7.4:15556551-15556570 | None:intergenic | 40.0% | |
| CATTGTCAAGAAGTCTTCGA+CGG | + | chr7.4:15561656-15561675 | None:intergenic | 40.0% | |
| CGGTACTTCATCTTTATAGG+TGG | + | chr7.4:15561859-15561878 | None:intergenic | 40.0% | |
| CGTCTTGTATAAACGCATGA+AGG | + | chr7.4:15559411-15559430 | None:intergenic | 40.0% | |
| CTATGGTGCATGACCATAAT+AGG | - | chr7.4:15561429-15561448 | MS.gene017994:intron | 40.0% | |
| CTCCAAACAAATTGCAGAGA+AGG | + | chr7.4:15560778-15560797 | None:intergenic | 40.0% | |
| GAATCAGTTCGTGAAAGGAA+GGG | + | chr7.4:15556495-15556514 | None:intergenic | 40.0% | |
| GAATCCTATCTATCCGATGT+GGG | + | chr7.4:15558890-15558909 | None:intergenic | 40.0% | |
| GACACATAGATATGTGTGCT+AGG | + | chr7.4:15557892-15557911 | None:intergenic | 40.0% | |
| GACCATTTATCCATCTCTTC+TGG | - | chr7.4:15560139-15560158 | MS.gene017994:intron | 40.0% | |
| GATGCTGTTCACTTGACATT+TGG | - | chr7.4:15557589-15557608 | MS.gene017994:intron | 40.0% | |
| GCCTAACATCCTTACAAAAC+CGG | + | chr7.4:15558956-15558975 | None:intergenic | 40.0% | |
| GCGTCTAGAAAAAAACCTGA+TGG | - | chr7.4:15557649-15557668 | MS.gene017994:intron | 40.0% | |
| GTCACGATGAAAAACCTTCT+GGG | - | chr7.4:15556562-15556581 | MS.gene017994:intron | 40.0% | |
| GTTCACTTGACATTTGGATG+CGG | - | chr7.4:15557595-15557614 | MS.gene017994:intron | 40.0% | |
| TAAACAACTTAGGCCCTGTT+TGG | + | chr7.4:15557271-15557290 | None:intergenic | 40.0% | |
| TACCAGAACTAGAGAGACAT+AGG | + | chr7.4:15561527-15561546 | None:intergenic | 40.0% | |
| TAGGTGGTGTATCGTACATA+AGG | + | chr7.4:15561843-15561862 | None:intergenic | 40.0% | |
| TCTCAGTGCAGGTTTGATAT+TGG | - | chr7.4:15560374-15560393 | MS.gene017994:intron | 40.0% | |
| TCTTGGGTATGTTTCTCCTT+CGG | - | chr7.4:15561766-15561785 | MS.gene017994:CDS | 40.0% | |
| TGAGATGAACATGCATCACA+GGG | + | chr7.4:15558356-15558375 | None:intergenic | 40.0% | |
| TGGAATCTGTAAGAACATGC+AGG | + | chr7.4:15560219-15560238 | None:intergenic | 40.0% | |
| TGTCACGATGAAAAACCTTC+TGG | - | chr7.4:15556561-15556580 | MS.gene017994:intron | 40.0% | |
| TGTGATGCATGTTCATCTCA+AGG | - | chr7.4:15558356-15558375 | MS.gene017994:intron | 40.0% | |
| TGTTTCTTTCATCAGGGGAA+GGG | - | chr7.4:15559836-15559855 | MS.gene017994:intron | 40.0% | |
| TTAAGAAAGGGGTCGATGAT+CGG | - | chr7.4:15562047-15562066 | MS.gene017994:CDS | 40.0% | |
| TTACCCTATGGACAATAACC+AGG | + | chr7.4:15560403-15560422 | None:intergenic | 40.0% | |
| TTCCTTCTTGACAATGTCGA+CGG | - | chr7.4:15561713-15561732 | MS.gene017994:intron | 40.0% | |
| TTCTGCTCATGAAGATGTAC+TGG | - | chr7.4:15561221-15561240 | MS.gene017994:intron | 40.0% | |
| TTCTTACAGATTCCATTCGC+AGG | - | chr7.4:15560224-15560243 | MS.gene017994:intron | 40.0% | |
| TTGAGATGAACATGCATCAC+AGG | + | chr7.4:15558357-15558376 | None:intergenic | 40.0% | |
| TTGTAGTGTCTTATGCTGTC+AGG | - | chr7.4:15562024-15562043 | MS.gene017994:CDS | 40.0% | |
| TTGTGAATCTCATTGGTGTG+TGG | - | chr7.4:15559991-15560010 | MS.gene017994:intron | 40.0% | |
| TTTGATCTTACCAACACGAC+CGG | + | chr7.4:15556733-15556752 | None:intergenic | 40.0% | |
| ! | GAAGTATTAGGTCTGGTCAT+AGG | - | chr7.4:15556631-15556650 | MS.gene017994:intron | 40.0% |
| ! | GGTTTCCTGAATCTTTTGTG+AGG | - | chr7.4:15558410-15558429 | MS.gene017994:intron | 40.0% |
| ! | GTGTAAAGTATTAGGCTGTG+GGG | - | chr7.4:15557780-15557799 | MS.gene017994:CDS | 40.0% |
| ! | TCCCTTCTCTGCAATTTGTT+TGG | - | chr7.4:15560773-15560792 | MS.gene017994:intron | 40.0% |
| ! | TCTTTTTCTCTTGTCTCGAG+TGG | - | chr7.4:15561982-15562001 | MS.gene017994:CDS | 40.0% |
| ! | TGATAACTACCGGCTATTTC+CGG | + | chr7.4:15557839-15557858 | None:intergenic | 40.0% |
| ! | TTCCTATGTCTCTCTAGTTC+TGG | - | chr7.4:15561522-15561541 | MS.gene017994:intron | 40.0% |
| ! | TTGGTGAGCCATAGTTTTTG+TGG | + | chr7.4:15559672-15559691 | None:intergenic | 40.0% |
| ! | TTGTTTCTTTCATCAGGGGA+AGG | - | chr7.4:15559835-15559854 | MS.gene017994:intron | 40.0% |
| !! | ATGAAGTACCGTAGAAGTTG+CGG | - | chr7.4:15561868-15561887 | MS.gene017994:CDS | 40.0% |
| !! | ATTACAAAAGTGGACTACCC+TGG | + | chr7.4:15558578-15558597 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | - | chr7.4:15559093-15559112 | MS.gene017994:CDS | 40.0% |
| !! | GATTACAAGCCGGTTTTGTA+AGG | - | chr7.4:15559083-15559102 | MS.gene017994:CDS | 40.0% |
| !! | TGAAGCATTGACGCATTAAC+AGG | + | chr7.4:15561166-15561185 | None:intergenic | 40.0% |
| !!! | ACAGAGGGGATAGTTTTGAT+TGG | - | chr7.4:15557804-15557823 | MS.gene017994:CDS | 40.0% |
| !!! | TAACTATGCCTTTTCAGGTC+TGG | - | chr7.4:15557561-15557580 | MS.gene017994:intron | 40.0% |
| AAAAGCAGTAGTTGGGATGC+TGG | + | chr7.4:15560676-15560695 | None:intergenic | 45.0% | |
| AAAGCAGTAGTTGGGATGCT+GGG | + | chr7.4:15560675-15560694 | None:intergenic | 45.0% | |
| ACATGGTATCAGAGCCTATC+GGG | - | chr7.4:15558989-15559008 | MS.gene017994:intron | 45.0% | |
| ACTAATCCAATCTCAGGGGT+TGG | - | chr7.4:15561077-15561096 | MS.gene017994:intron | 45.0% | |
| ACTCTCGGTTCTTCTCTCAA+CGG | - | chr7.4:15556357-15556376 | MS.gene017994:CDS | 45.0% | |
| ATCAGACACCAGACCTGAAA+AGG | + | chr7.4:15557572-15557591 | None:intergenic | 45.0% | |
| ATGAAGGGCTTCAACTGCTA+GGG | + | chr7.4:15559395-15559414 | None:intergenic | 45.0% | |
| CAAGCATATCTACCTGCGAA+TGG | + | chr7.4:15560239-15560258 | None:intergenic | 45.0% | |
| CAAGGTAACAGCAGCAGAAA+AGG | + | chr7.4:15558226-15558245 | None:intergenic | 45.0% | |
| CAATTCCCAAAAACGAGCCT+GGG | + | chr7.4:15561253-15561272 | None:intergenic | 45.0% | |
| CAGCAGCAGAAAAGGAAATG+TGG | + | chr7.4:15558218-15558237 | None:intergenic | 45.0% | |
| CAGGTTTGATATTGGCATCC+TGG | - | chr7.4:15560382-15560401 | MS.gene017994:intron | 45.0% | |
| CGTCGAAGACTTCTTGACAA+TGG | - | chr7.4:15561654-15561673 | MS.gene017994:intron | 45.0% | |
| CGTGACAAGACCAATAATGG+TGG | + | chr7.4:15556548-15556567 | None:intergenic | 45.0% | |
| CTTCAATGGTTTCTCAGTGC+AGG | - | chr7.4:15560363-15560382 | MS.gene017994:intron | 45.0% | |
| CTTGGGTATGTTTCTCCTTC+GGG | - | chr7.4:15561767-15561786 | MS.gene017994:CDS | 45.0% | |
| GAACATGCAGGAAAACAGAG+TGG | + | chr7.4:15560207-15560226 | None:intergenic | 45.0% | |
| GACATGGTATCAGAGCCTAT+CGG | - | chr7.4:15558988-15559007 | MS.gene017994:intron | 45.0% | |
| GATGCATGTTCATCTCAAGG+TGG | - | chr7.4:15558359-15558378 | MS.gene017994:intron | 45.0% | |
| GCATCCTGGTTATTGTCCAT+AGG | - | chr7.4:15560396-15560415 | MS.gene017994:intron | 45.0% | |
| GCTGCTTCTATACACTATCG+TGG | + | chr7.4:15558744-15558763 | None:intergenic | 45.0% | |
| GGAATCAGTTCGTGAAAGGA+AGG | + | chr7.4:15556496-15556515 | None:intergenic | 45.0% | |
| GGACTACCCTGGCAAAATAA+TGG | + | chr7.4:15558567-15558586 | None:intergenic | 45.0% | |
| GGAGAAGGCCACAAAAACTA+TGG | - | chr7.4:15559661-15559680 | MS.gene017994:intron | 45.0% | |
| GGCAATCAAAATCCGTGCAT+AGG | - | chr7.4:15561675-15561694 | MS.gene017994:intron | 45.0% | |
| GGTTCTTCAGGAACTATGCT+CGG | - | chr7.4:15560012-15560031 | MS.gene017994:intron | 45.0% | |
| GTGCTGTGCATCACCTATTA+TGG | + | chr7.4:15561445-15561464 | None:intergenic | 45.0% | |
| GTTCGAGGTTGTTGGAAAGA+AGG | + | chr7.4:15556432-15556451 | None:intergenic | 45.0% | |
| TAGTCCCACATCGGATAGAT+AGG | - | chr7.4:15558883-15558902 | MS.gene017994:intron | 45.0% | |
| TAGTTGTAGCGGTAAAGGGA+AGG | + | chr7.4:15561331-15561350 | None:intergenic | 45.0% | |
| TATGAACGTGTTCTGTGTGC+AGG | - | chr7.4:15559934-15559953 | MS.gene017994:intron | 45.0% | |
| TCATTGGTGTGTGGTTCTTC+AGG | - | chr7.4:15560000-15560019 | MS.gene017994:intron | 45.0% | |
| TCCTTCTTGACAATGTCGAC+GGG | - | chr7.4:15561714-15561733 | MS.gene017994:intron | 45.0% | |
| TCGGTTGAAGGAGTGGAAAT+CGG | + | chr7.4:15556456-15556475 | None:intergenic | 45.0% | |
| TCTCAAGGTGGAGAGATGAT+TGG | - | chr7.4:15558371-15558390 | MS.gene017994:intron | 45.0% | |
| TCTTCTCTCAACGGCGATTT+CGG | - | chr7.4:15556366-15556385 | MS.gene017994:CDS | 45.0% | |
| TGCTGGAATCAGTTCGTGAA+AGG | + | chr7.4:15556500-15556519 | None:intergenic | 45.0% | |
| TGGTGGTATCTTGCTCCAAA+TGG | - | chr7.4:15560644-15560663 | MS.gene017994:intron | 45.0% | |
| TTAGCAAGTAGCAGCCATCT+TGG | + | chr7.4:15559557-15559576 | None:intergenic | 45.0% | |
| TTATGTTAGCGGCCAACACT+CGG | - | chr7.4:15558853-15558872 | MS.gene017994:intron | 45.0% | |
| TTCCACTCCTTCAACCGATT+CGG | - | chr7.4:15556458-15556477 | MS.gene017994:intron | 45.0% | |
| ! | AAATCGGTGTTCGAGGTTGT+TGG | + | chr7.4:15556440-15556459 | None:intergenic | 45.0% |
| ! | AATGTGCTTTTACCACCTCG+CGG | - | chr7.4:15560737-15560756 | MS.gene017994:intron | 45.0% |
| ! | ACTTGGATTTGGTTTCCCGA+AGG | + | chr7.4:15561785-15561804 | None:intergenic | 45.0% |
| ! | GTGCATAGGAGGTTTTCCTT+TGG | - | chr7.4:15561689-15561708 | MS.gene017994:intron | 45.0% |
| ! | TTGCTCATTGGTCTCTTCAC+CGG | - | chr7.4:15556711-15556730 | MS.gene017994:intron | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+CGG | + | chr7.4:15558947-15558966 | None:intergenic | 45.0% |
| !! | CTTCAACCGATTCGGGTTTA+CGG | - | chr7.4:15556466-15556485 | MS.gene017994:intron | 45.0% |
| !! | GCCGGTTTTGTAAGGATGTT+AGG | - | chr7.4:15558952-15558971 | MS.gene017994:intron | 45.0% |
| !!! | TAAAATTAATTTAAGTTTAA+AGG | - | chr7.4:15558509-15558528 | MS.gene017994:CDS | 5.0% |
| AAAAGCGAAGCGACGATCGT+TGG | + | chr7.4:15556400-15556419 | None:intergenic | 50.0% | |
| ACACTGGTGGGATTACAAGC+CGG | - | chr7.4:15559073-15559092 | MS.gene017994:CDS | 50.0% | |
| AGATGTACTGGATGTCTCCC+AGG | - | chr7.4:15561233-15561252 | MS.gene017994:intron | 50.0% | |
| AGGCCTCGATATTCACGACA+TGG | - | chr7.4:15558972-15558991 | MS.gene017994:intron | 50.0% | |
| AGTGAACCAACCACATGACC+AGG | + | chr7.4:15561279-15561298 | None:intergenic | 50.0% | |
| ATCTCAGGGGTTGGAGTGAA+AGG | - | chr7.4:15561086-15561105 | MS.gene017994:intron | 50.0% | |
| ATTAGGCTGTGGGGTACAGA+GGG | - | chr7.4:15557789-15557808 | MS.gene017994:CDS | 50.0% | |
| CATGAAGGGCTTCAACTGCT+AGG | + | chr7.4:15559396-15559415 | None:intergenic | 50.0% | |
| CATGATCAATCTGCACCGTG+AGG | + | chr7.4:15562123-15562142 | None:intergenic | 50.0% | |
| CCAATTCCCAAAAACGAGCC+TGG | + | chr7.4:15561254-15561273 | None:intergenic | 50.0% | |
| CGTAAACCCGAATCGGTTGA+AGG | + | chr7.4:15556468-15556487 | None:intergenic | 50.0% | |
| CTGGACCCAACCACCATTAT+TGG | - | chr7.4:15556535-15556554 | MS.gene017994:intron | 50.0% | |
| GACTAAATCCCACCGAGTGT+TGG | + | chr7.4:15558868-15558887 | None:intergenic | 50.0% | |
| GGGTTTCCGTAAACCCGAAT+CGG | + | chr7.4:15556475-15556494 | None:intergenic | 50.0% | |
| GGTCTTGCACGCCAAAATCA+TGG | + | chr7.4:15562102-15562121 | None:intergenic | 50.0% | |
| GGTGGGATTTAGTCCCACAT+CGG | - | chr7.4:15558874-15558893 | MS.gene017994:intron | 50.0% | |
| GTTTATGTGCAAGTGGTCCC+TGG | + | chr7.4:15561022-15561041 | None:intergenic | 50.0% | |
| TATTAGGCTGTGGGGTACAG+AGG | - | chr7.4:15557788-15557807 | MS.gene017994:CDS | 50.0% | |
| TCCCGTCGACATTGTCAAGA+AGG | + | chr7.4:15561718-15561737 | None:intergenic | 50.0% | |
| TGAAACGTGAGGACACTGGT+GGG | - | chr7.4:15559061-15559080 | MS.gene017994:CDS | 50.0% | |
| TTCACTCCAACCCCTGAGAT+TGG | + | chr7.4:15561086-15561105 | None:intergenic | 50.0% | |
| ! | ATGTCTCCCAGGCTCGTTTT+TGG | - | chr7.4:15561244-15561263 | MS.gene017994:intron | 50.0% |
| ! | GGTTGGTTCACTGTCAATGC+AGG | - | chr7.4:15561287-15561306 | MS.gene017994:intron | 50.0% |
| ! | TCCACTCCTTCAACCGATTC+GGG | - | chr7.4:15556459-15556478 | MS.gene017994:intron | 50.0% |
| ! | TTTTGGCGTGCAAGACCTCA+CGG | - | chr7.4:15562105-15562124 | MS.gene017994:CDS | 50.0% |
| !! | CCAGGCTCGTTTTTGGGAAT+TGG | - | chr7.4:15561251-15561270 | MS.gene017994:intron | 50.0% |
| !! | CCGTACAAGCCGGTTTTGTA+AGG | - | chr7.4:15558944-15558963 | MS.gene017994:intron | 50.0% |
| !! | CGTTTTTGGGAATTGGTGCC+TGG | - | chr7.4:15561258-15561277 | MS.gene017994:intron | 50.0% |
| !! | TGTCTCCCAGGCTCGTTTTT+GGG | - | chr7.4:15561245-15561264 | MS.gene017994:intron | 50.0% |
| ACCCGAATCGGTTGAAGGAG+TGG | + | chr7.4:15556463-15556482 | None:intergenic | 55.0% | |
| AGCCTATCGGGTCCATCGTT+GGG | - | chr7.4:15559001-15559020 | MS.gene017994:intron | 55.0% | |
| AGTGTCCTCACGTTTCAGCC+CGG | + | chr7.4:15559058-15559077 | None:intergenic | 55.0% | |
| CCAATGCGCCGCAACTTCTA+CGG | + | chr7.4:15561879-15561898 | None:intergenic | 55.0% | |
| CTGAAACGTGAGGACACTGG+TGG | - | chr7.4:15559060-15559079 | MS.gene017994:CDS | 55.0% | |
| GCTTGCATCGTCCATGCTTC+AGG | - | chr7.4:15559023-15559042 | MS.gene017994:intron | 55.0% | |
| GGTGGTTGGGTCCAGAAGAA+GGG | + | chr7.4:15556530-15556549 | None:intergenic | 55.0% | |
| GTCCATGCTTCAGGCCCATT+GGG | - | chr7.4:15559032-15559051 | MS.gene017994:intron | 55.0% | |
| TGGTGGTTGGGTCCAGAAGA+AGG | + | chr7.4:15556531-15556550 | None:intergenic | 55.0% | |
| TTAGGCTGTGGGGTACAGAG+GGG | - | chr7.4:15557790-15557809 | MS.gene017994:CDS | 55.0% | |
| ! | CTTTTACCACCTCGCGGCTT+GGG | - | chr7.4:15560743-15560762 | MS.gene017994:intron | 55.0% |
| ! | GGAATTGGTGCCTGGTCATG+TGG | - | chr7.4:15561266-15561285 | MS.gene017994:intron | 55.0% |
| ! | GGAGTGGAAATCGGTGTTCG+AGG | + | chr7.4:15556447-15556466 | None:intergenic | 55.0% |
| ! | TTGGTGCCTGGTCATGTGGT+TGG | - | chr7.4:15561270-15561289 | MS.gene017994:intron | 55.0% |
| ! | TTTTACCACCTCGCGGCTTG+GGG | - | chr7.4:15560744-15560763 | MS.gene017994:intron | 55.0% |
| !! | CAAAACCGGCTTGTACGGTG+AGG | + | chr7.4:15558942-15558961 | None:intergenic | 55.0% |
| ACGTTTCAGCCCGGCCCAAT+GGG | + | chr7.4:15559049-15559068 | None:intergenic | 60.0% | |
| AGCCCAACGATGGACCCGAT+AGG | + | chr7.4:15559006-15559025 | None:intergenic | 60.0% | |
| AGCGAAGCGACGATCGTTGG+CGG | + | chr7.4:15556397-15556416 | None:intergenic | 60.0% | |
| ATGCTTCAGGCCCATTGGGC+CGG | - | chr7.4:15559036-15559055 | MS.gene017994:intron | 60.0% | |
| CCGTAGAAGTTGCGGCGCAT+TGG | - | chr7.4:15561876-15561895 | MS.gene017994:CDS | 60.0% | |
| CGTCCATGCTTCAGGCCCAT+TGG | - | chr7.4:15559031-15559050 | MS.gene017994:intron | 60.0% | |
| GAGCCTATCGGGTCCATCGT+TGG | - | chr7.4:15559000-15559019 | MS.gene017994:intron | 60.0% | |
| GATTACTACCCCAAGCCGCG+AGG | + | chr7.4:15560755-15560774 | None:intergenic | 60.0% | |
| GCACTCCTCACCGTACAAGC+CGG | - | chr7.4:15558934-15558953 | MS.gene017994:intron | 60.0% | |
| GCAGTAGTTGGGATGCTGGG+AGG | + | chr7.4:15560672-15560691 | None:intergenic | 60.0% | |
| GGACGATGCAAGCCCAACGA+TGG | + | chr7.4:15559016-15559035 | None:intergenic | 60.0% | |
| GGGCTGAAACGTGAGGACAC+TGG | - | chr7.4:15559057-15559076 | MS.gene017994:CDS | 60.0% | |
| GGTCTCTTCACCGGTCGTGT+TGG | - | chr7.4:15556720-15556739 | MS.gene017994:intron | 60.0% | |
| GTTAGCGGCCAACACTCGGT+GGG | - | chr7.4:15558857-15558876 | MS.gene017994:intron | 60.0% | |
| TGTTAGCGGCCAACACTCGG+TGG | - | chr7.4:15558856-15558875 | MS.gene017994:intron | 60.0% | |
| ! | GCTTTTACCACCTCGCGGCT+TGG | - | chr7.4:15560742-15560761 | MS.gene017994:intron | 60.0% |
| !! | GGATGCTGGGAGGTGCCATT+TGG | + | chr7.4:15560662-15560681 | None:intergenic | 60.0% |
| CACGTTTCAGCCCGGCCCAA+TGG | + | chr7.4:15559050-15559069 | None:intergenic | 65.0% | |
| GGCCCAATGGGCCTGAAGCA+TGG | + | chr7.4:15559037-15559056 | None:intergenic | 65.0% | |
| TACTACCCCAAGCCGCGAGG+TGG | + | chr7.4:15560752-15560771 | None:intergenic | 65.0% | |
| TGCTTCAGGCCCATTGGGCC+GGG | - | chr7.4:15559037-15559056 | MS.gene017994:intron | 65.0% | |
| TTGGGCCGGGCTGAAACGTG+AGG | - | chr7.4:15559050-15559069 | MS.gene017994:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 15556342 | 15562147 | 15556342 | ID=MS.gene017994 |
| chr7.4 | mRNA | 15556342 | 15562147 | 15556342 | ID=MS.gene017994.t1;Parent=MS.gene017994 |
| chr7.4 | exon | 15561748 | 15562147 | 15561748 | ID=MS.gene017994.t1.exon1;Parent=MS.gene017994.t1 |
| chr7.4 | CDS | 15561748 | 15562147 | 15561748 | ID=cds.MS.gene017994.t1;Parent=MS.gene017994.t1 |
| chr7.4 | exon | 15560803 | 15560911 | 15560803 | ID=MS.gene017994.t1.exon2;Parent=MS.gene017994.t1 |
| chr7.4 | CDS | 15560803 | 15560911 | 15560803 | ID=cds.MS.gene017994.t1;Parent=MS.gene017994.t1 |
| chr7.4 | exon | 15560284 | 15560323 | 15560284 | ID=MS.gene017994.t1.exon3;Parent=MS.gene017994.t1 |
| chr7.4 | CDS | 15560284 | 15560323 | 15560284 | ID=cds.MS.gene017994.t1;Parent=MS.gene017994.t1 |
| chr7.4 | exon | 15559046 | 15559122 | 15559046 | ID=MS.gene017994.t1.exon4;Parent=MS.gene017994.t1 |
| chr7.4 | CDS | 15559046 | 15559122 | 15559046 | ID=cds.MS.gene017994.t1;Parent=MS.gene017994.t1 |
| chr7.4 | exon | 15558445 | 15558533 | 15558445 | ID=MS.gene017994.t1.exon5;Parent=MS.gene017994.t1 |
| chr7.4 | CDS | 15558445 | 15558533 | 15558445 | ID=cds.MS.gene017994.t1;Parent=MS.gene017994.t1 |
| chr7.4 | exon | 15558244 | 15558313 | 15558244 | ID=MS.gene017994.t1.exon6;Parent=MS.gene017994.t1 |
| chr7.4 | CDS | 15558244 | 15558313 | 15558244 | ID=cds.MS.gene017994.t1;Parent=MS.gene017994.t1 |
| chr7.4 | exon | 15558071 | 15558109 | 15558071 | ID=MS.gene017994.t1.exon7;Parent=MS.gene017994.t1 |
| chr7.4 | CDS | 15558071 | 15558109 | 15558071 | ID=cds.MS.gene017994.t1;Parent=MS.gene017994.t1 |
| chr7.4 | exon | 15557776 | 15557926 | 15557776 | ID=MS.gene017994.t1.exon8;Parent=MS.gene017994.t1 |
| chr7.4 | CDS | 15557776 | 15557926 | 15557776 | ID=cds.MS.gene017994.t1;Parent=MS.gene017994.t1 |
| chr7.4 | exon | 15557181 | 15557270 | 15557181 | ID=MS.gene017994.t1.exon9;Parent=MS.gene017994.t1 |
| chr7.4 | CDS | 15557181 | 15557270 | 15557181 | ID=cds.MS.gene017994.t1;Parent=MS.gene017994.t1 |
| chr7.4 | exon | 15556342 | 15556443 | 15556342 | ID=MS.gene017994.t1.exon10;Parent=MS.gene017994.t1 |
| chr7.4 | CDS | 15556342 | 15556443 | 15556342 | ID=cds.MS.gene017994.t1;Parent=MS.gene017994.t1 |
| Gene Sequence |
| Protein sequence |
