AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene019246

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene019246.t1 MTR_3g448360 93.531 371 24 0 1 371 1 371 0.0 722
MS.gene019246.t1 MTR_3g069780 79.088 373 74 3 1 371 1 371 0.0 598
MS.gene019246.t1 MTR_3g438030 78.552 373 76 3 1 371 1 371 0.0 595
MS.gene019246.t1 MTR_3g069520 76.344 372 84 3 1 371 1 369 0.0 576
MS.gene019246.t1 MTR_3g463960 66.408 387 112 5 1 370 2 387 0.0 515
MS.gene019246.t1 MTR_3g463950 66.408 387 112 5 1 370 2 387 0.0 515
MS.gene019246.t1 MTR_3g463970 66.408 387 112 5 1 370 2 387 0.0 515
MS.gene019246.t1 MTR_3g463940 66.408 387 112 5 1 370 2 387 0.0 515
MS.gene019246.t1 MTR_3g463930 64.557 395 113 7 1 370 2 394 1.18e-176 496
MS.gene019246.t1 MTR_2g079090 68.011 372 103 6 1 370 1 358 2.67e-176 494
MS.gene019246.t1 MTR_0029s0050 67.742 372 104 6 1 370 1 358 2.48e-174 489
MS.gene019246.t1 MTR_2g079080 66.935 372 107 6 1 370 1 358 2.26e-173 487
MS.gene019246.t1 MTR_0029s0100 67.204 372 106 6 1 370 1 358 3.92e-172 484
MS.gene019246.t1 MTR_2g043980 60.054 373 129 6 1 371 7 361 1.35e-152 434
MS.gene019246.t1 MTR_2g015650 51.733 375 167 7 5 371 6 374 2.69e-126 368
MS.gene019246.t1 MTR_2g015670 50.556 360 155 8 17 371 19 360 2.58e-114 337
MS.gene019246.t1 MTR_2g015630 48.703 347 163 7 34 371 36 376 8.25e-104 311
MS.gene019246.t1 MTR_2g015580 44.715 369 183 7 10 364 22 383 4.41e-102 307
MS.gene019246.t1 MTR_2g043990 53.061 294 111 5 1 292 69 337 1.19e-96 291
MS.gene019246.t1 MTR_2g015590 44.575 341 179 5 27 361 29 365 2.03e-93 284
MS.gene019246.t1 MTR_3g466240 58.824 221 60 2 102 319 2 194 3.51e-82 249
MS.gene019246.t1 MTR_2g015590 44.853 272 144 3 27 293 29 299 1.76e-71 227
MS.gene019246.t1 MTR_4g104240 36.785 367 205 13 5 361 18 367 2.88e-65 212
MS.gene019246.t1 MTR_3g466190 59.429 175 46 4 56 226 7 160 3.56e-59 191
MS.gene019246.t1 MTR_3g466190 76.923 78 18 0 294 371 152 229 5.14e-35 128
MS.gene019246.t1 MTR_7g087190 34.293 382 196 16 19 370 33 389 2.37e-53 181
MS.gene019246.t1 MTR_1g030220 35.574 357 194 11 27 363 38 378 7.44e-50 172
MS.gene019246.t1 MTR_8g028160 35.556 360 206 13 18 361 25 374 2.93e-48 168
MS.gene019246.t1 MTR_6g007090 31.675 382 222 10 1 361 7 370 3.14e-47 165
MS.gene019246.t1 MTR_7g111780 35.569 343 193 13 29 363 36 358 5.75e-47 164
MS.gene019246.t1 MTR_1g030268 35.393 356 194 13 27 363 38 376 6.50e-47 164
MS.gene019246.t1 MTR_7g116870 33.518 361 203 13 27 369 31 372 1.59e-46 163
MS.gene019246.t1 MTR_8g089805 32.808 381 205 15 15 363 20 381 3.53e-46 162
MS.gene019246.t1 MTR_7g033165 33.148 359 199 10 27 362 31 371 1.84e-45 160
MS.gene019246.t1 MTR_1g030340 32.908 392 214 15 4 370 18 385 2.95e-45 160
MS.gene019246.t1 MTR_1g030275 35.028 354 190 13 27 357 37 373 1.57e-43 155
MS.gene019246.t1 MTR_1g030230 33.425 365 207 12 19 363 22 370 6.22e-42 151
MS.gene019246.t1 MTR_7g113860 31.720 372 201 15 19 361 25 372 1.72e-41 150
MS.gene019246.t1 MTR_7g033150 32.836 402 213 16 1 366 1 381 3.24e-41 149
MS.gene019246.t1 MTR_7g113860 32.353 374 204 15 15 361 15 366 1.35e-40 147
MS.gene019246.t1 MTR_7g033155 32.041 387 201 15 21 366 30 395 1.66e-38 142
MS.gene019246.t1 MTR_6g007095 30.769 390 226 11 1 367 7 375 2.56e-38 145
MS.gene019246.t1 MTR_6g007095 28.375 363 211 11 22 363 356 690 1.93e-26 111
MS.gene019246.t1 MTR_1g030268 35.971 278 155 9 27 293 38 303 3.36e-37 137
MS.gene019246.t1 MTR_1g082390 30.239 377 227 14 5 364 13 370 6.26e-37 137
MS.gene019246.t1 MTR_7g033165 35.472 265 152 8 27 280 31 287 5.07e-33 125
MS.gene019246.t1 MTR_8g031420 30.189 371 215 14 2 356 5 347 7.28e-33 126
MS.gene019246.t1 MTR_8g038680 29.444 360 208 13 27 361 26 364 3.01e-32 124
MS.gene019246.t1 MTR_7g111780 34.328 268 152 10 103 363 9 259 5.35e-32 121
MS.gene019246.t1 MTR_8g031430 29.598 348 200 14 24 356 32 349 1.07e-31 123
MS.gene019246.t1 MTR_8g031400 30.636 346 199 13 24 356 32 349 1.19e-31 123
MS.gene019246.t1 MTR_8g031390 29.032 341 210 13 24 356 32 348 1.40e-31 123
MS.gene019246.t1 MTR_6g007100 30.446 381 220 17 1 367 7 356 1.49e-31 122
MS.gene019246.t1 MTR_8g022810 31.054 351 195 16 28 360 40 361 1.77e-31 122
MS.gene019246.t1 MTR_4g056160 29.970 337 206 11 29 354 27 344 1.22e-28 114
MS.gene019246.t1 MTR_4g056280 29.301 372 226 13 1 363 8 351 5.37e-28 112
MS.gene019246.t1 MTR_1g025780 30.055 366 219 16 1 355 15 354 8.48e-28 112
MS.gene019246.t1 MTR_3g052490 29.380 371 217 15 3 358 12 352 3.01e-27 110
MS.gene019246.t1 MTR_1g030265 32.013 303 168 12 79 357 53 341 1.49e-26 108
MS.gene019246.t1 MTR_8g031390 29.492 295 179 12 24 313 32 302 2.15e-26 107
MS.gene019246.t1 MTR_8g014910 29.296 355 211 13 15 354 18 347 2.46e-26 108
MS.gene019246.t1 MTR_2g033930 27.763 371 234 11 1 362 8 353 8.10e-26 107
MS.gene019246.t1 MTR_2g044100 27.882 373 222 14 3 356 17 361 8.62e-26 107
MS.gene019246.t1 MTR_5g078210 28.657 335 194 14 33 351 29 334 1.07e-25 106
MS.gene019246.t1 MTR_8g089805 28.947 304 177 12 84 363 25 313 1.59e-25 105
MS.gene019246.t1 MTR_1g025680 30.347 346 192 15 29 355 34 349 3.68e-25 106
MS.gene019246.t1 MTR_2g100620 27.219 338 212 12 29 354 31 346 7.50e-25 104
MS.gene019246.t1 MTR_2g015080 27.717 368 218 16 3 349 16 356 7.77e-25 104
MS.gene019246.t1 MTR_8g079050 29.178 377 213 17 3 356 15 360 9.17e-25 104
MS.gene019246.t1 MTR_5g022630 29.630 351 210 13 9 346 25 351 1.87e-23 100
MS.gene019246.t1 MTR_3g098270 27.778 378 226 17 1 357 3 354 2.03e-23 100
MS.gene019246.t1 MTR_4g035353 26.404 356 223 14 16 357 18 348 4.92e-23 99.4
MS.gene019246.t1 MTR_1g025700 29.745 353 207 15 16 355 40 364 6.64e-23 99.0
MS.gene019246.t1 MTR_8g012540 28.383 303 196 9 27 320 26 316 6.99e-23 98.6
MS.gene019246.t1 MTR_1g025720 29.775 356 211 14 3 347 16 343 7.93e-23 98.6
MS.gene019246.t1 MTR_3g052580 28.302 371 219 17 3 358 9 347 8.99e-23 99.0
MS.gene019246.t1 MTR_7g113860 28.617 311 176 13 77 361 8 298 1.10e-22 97.4
MS.gene019246.t1 MTR_3g052580 28.302 371 219 17 3 358 8 346 1.34e-22 98.6
MS.gene019246.t1 MTR_5g009100 27.647 340 213 13 31 359 48 365 1.73e-22 97.8
MS.gene019246.t1 MTR_5g078210 28.228 333 182 13 33 351 29 318 2.13e-22 96.7
MS.gene019246.t1 MTR_3g435540 27.747 364 209 14 31 367 25 361 2.16e-22 97.4
MS.gene019246.t1 MTR_4g108690 27.273 341 205 13 31 355 29 342 3.36e-22 97.1
MS.gene019246.t1 MTR_3g052480 29.067 375 214 19 4 358 12 354 8.46e-22 95.9
MS.gene019246.t1 MTR_8g022790 25.656 343 216 9 24 356 32 345 1.56e-21 95.1
MS.gene019246.t1 MTR_4g087985 28.814 354 203 15 29 356 36 366 2.08e-21 94.7
MS.gene019246.t1 MTR_5g074270 28.571 343 200 14 27 351 31 346 2.89e-21 94.4
MS.gene019246.t1 MTR_2g033920 29.050 358 198 14 28 362 34 358 3.13e-21 94.4
MS.gene019246.t1 MTR_3g005650 29.305 331 190 16 29 345 30 330 3.86e-21 93.6
MS.gene019246.t1 MTR_5g093090 27.056 377 222 16 4 362 11 352 5.30e-21 93.6
MS.gene019246.t1 MTR_5g084750 27.928 333 193 14 29 343 30 333 6.34e-21 93.2
MS.gene019246.t1 MTR_1g025760 29.118 340 204 14 29 355 80 395 1.14e-20 92.8
MS.gene019246.t1 MTR_0009s0250 26.542 373 228 14 4 362 5 345 2.78e-20 91.3
MS.gene019246.t1 MTR_5g084770 28.418 373 213 16 3 354 4 343 3.25e-20 90.9
MS.gene019246.t1 MTR_3g082830 27.429 350 205 14 29 359 38 357 4.42e-20 90.9
MS.gene019246.t1 MTR_5g083040 28.190 337 213 13 29 353 32 351 6.19e-20 90.5
MS.gene019246.t1 MTR_3g464730 26.542 373 226 14 1 355 2 344 6.63e-20 90.1
MS.gene019246.t1 MTR_4g122200 28.351 388 212 19 1 365 15 359 9.72e-20 89.7
MS.gene019246.t1 MTR_5g084790 28.940 349 193 17 29 355 32 347 1.69e-19 89.0
MS.gene019246.t1 MTR_3g114090 29.799 349 194 19 27 355 34 351 1.86e-19 89.0
MS.gene019246.t1 MTR_5g022640 27.945 365 226 13 6 355 17 359 1.77e-18 86.3
MS.gene019246.t1 MTR_8g075230 27.493 371 222 13 5 355 8 351 5.26e-18 84.7
MS.gene019246.t1 MTR_1g024890 26.121 379 216 18 8 356 4 348 5.56e-18 84.7
MS.gene019246.t1 MTR_2g084585 26.331 338 214 12 29 354 30 344 1.79e-17 83.2
MS.gene019246.t1 MTR_3g114120 28.529 340 195 15 29 350 47 356 2.40e-17 82.8
MS.gene019246.t1 MTR_1g060490 23.964 338 214 11 26 353 34 338 2.55e-17 82.4
MS.gene019246.t1 MTR_1g025910 26.946 334 207 14 34 355 41 349 2.60e-17 82.8
MS.gene019246.t1 MTR_7g116520 26.286 350 209 16 28 358 33 352 2.89e-17 82.8
MS.gene019246.t1 MTR_8g022810 33.971 209 106 10 28 221 40 231 2.92e-17 82.0
MS.gene019246.t1 MTR_3g021460 24.484 339 217 9 29 359 31 338 4.33e-17 82.0
MS.gene019246.t1 MTR_1g060500 23.907 343 216 12 26 353 37 349 5.13e-17 81.6
MS.gene019246.t1 MTR_1g092750 25.076 331 204 11 30 349 41 338 1.02e-16 80.9
MS.gene019246.t1 MTR_3g005660 24.865 370 233 18 3 351 5 350 1.27e-16 80.9
MS.gene019246.t1 MTR_8g075220 24.479 384 237 13 1 355 1 360 1.17e-15 77.8
MS.gene019246.t1 MTR_1g069175 25.936 374 224 15 9 358 9 353 4.36e-15 76.3
MS.gene019246.t1 MTR_2g461580 23.181 371 240 11 1 359 1 338 1.01e-14 75.1
MS.gene019246.t1 MTR_5g093090 26.452 310 182 13 4 295 11 292 1.45e-14 73.9
MS.gene019246.t1 MTR_2g033920 28.269 283 165 11 28 293 34 295 5.75e-14 72.4
MS.gene019246.t1 MTR_1g092740 24.179 335 213 12 30 353 39 343 1.97e-13 71.2
MS.gene019246.t1 MTR_3g023220 26.061 330 192 14 30 345 34 325 2.37e-13 70.9
MS.gene019246.t1 MTR_1g079540 25.641 351 210 13 26 356 28 347 3.04e-12 67.8
MS.gene019246.t1 MTR_8g074580 25.121 414 221 15 3 356 19 403 3.48e-12 67.8
MS.gene019246.t1 MTR_1g060520 22.687 335 194 10 26 353 37 313 5.50e-12 66.6
MS.gene019246.t1 MTR_2g017965 24.629 337 205 14 30 350 34 337 5.79e-12 67.0
MS.gene019246.t1 MTR_8g074560 24.931 361 227 14 29 371 31 365 8.12e-12 66.2
MS.gene019246.t1 MTR_2g017875 25.000 336 194 15 29 344 34 331 1.06e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene019246.t1 AT5G45910 45.187 374 189 9 1 362 1 370 1.99e-101 305
MS.gene019246.t1 AT1G28600 43.333 360 188 10 11 361 12 364 3.43e-88 271
MS.gene019246.t1 AT1G31550 42.588 371 192 11 1 361 10 369 7.30e-88 271
MS.gene019246.t1 AT1G28610 41.962 367 197 9 6 363 7 366 8.45e-88 270
MS.gene019246.t1 AT1G28590 42.197 346 186 7 27 364 34 373 4.26e-86 266
MS.gene019246.t1 AT1G28570 41.240 371 200 9 1 361 6 368 5.16e-86 266
MS.gene019246.t1 AT1G28580 42.197 346 180 8 27 361 35 371 1.42e-84 262
MS.gene019246.t1 AT2G27360 42.609 345 181 9 27 361 31 368 2.51e-84 261
MS.gene019246.t1 AT1G31550 42.049 371 191 12 1 361 10 366 4.89e-84 261
MS.gene019246.t1 AT1G28640 40.751 346 189 8 27 363 33 371 4.69e-81 253
MS.gene019246.t1 AT1G28670 41.714 350 181 10 27 363 33 372 2.04e-80 251
MS.gene019246.t1 AT1G28660 39.946 373 198 11 3 363 13 371 2.22e-79 248
MS.gene019246.t1 AT1G28650 41.261 349 183 9 27 363 35 373 2.38e-78 246
MS.gene019246.t1 AT1G28660 39.946 373 197 12 3 363 13 370 3.58e-78 245
MS.gene019246.t1 AT1G28580 40.339 295 160 7 74 361 5 290 6.36e-67 214
MS.gene019246.t1 AT3G48460 37.429 350 189 11 26 361 35 368 1.48e-62 205
MS.gene019246.t1 AT5G03980 36.919 344 164 12 15 353 15 310 5.16e-55 184
MS.gene019246.t1 AT5G14450 32.987 385 214 13 3 367 21 381 1.24e-47 166
MS.gene019246.t1 AT1G56670 32.908 392 214 15 1 368 1 367 3.58e-47 164
MS.gene019246.t1 AT1G28570 40.187 214 117 5 154 361 88 296 2.25e-46 161
MS.gene019246.t1 AT1G28570 43.902 82 42 2 1 78 6 87 7.06e-11 63.2
MS.gene019246.t1 AT1G28570 40.476 210 114 5 158 361 1 205 9.07e-46 156
MS.gene019246.t1 AT4G01130 33.053 357 201 12 27 361 32 372 1.27e-44 158
MS.gene019246.t1 AT1G67830 33.978 362 194 15 20 353 21 365 1.60e-44 157
MS.gene019246.t1 AT1G54790 32.632 380 213 16 3 361 12 369 6.59e-43 154
MS.gene019246.t1 AT3G62280 32.486 354 200 12 20 361 31 357 1.02e-42 152
MS.gene019246.t1 AT1G28600 43.284 201 103 7 11 204 12 208 2.52e-40 142
MS.gene019246.t1 AT3G26430 31.933 357 210 12 27 363 29 372 3.21e-40 146
MS.gene019246.t1 AT1G09390 31.818 352 206 13 29 369 37 365 1.71e-39 144
MS.gene019246.t1 AT3G05180 31.897 348 206 12 27 356 34 368 8.93e-39 142
MS.gene019246.t1 AT1G54790 31.538 390 211 17 1 361 6 368 1.42e-38 142
MS.gene019246.t1 AT1G28610 40.594 202 109 6 6 200 7 204 5.25e-36 132
MS.gene019246.t1 AT1G54790 29.854 412 215 18 1 361 6 394 1.56e-35 134
MS.gene019246.t1 AT4G01130 34.050 279 160 8 27 293 32 298 1.35e-34 130
MS.gene019246.t1 AT3G27950 31.016 374 219 13 9 363 11 364 3.34e-34 130
MS.gene019246.t1 AT1G56670 32.063 315 174 11 1 293 1 297 8.35e-34 127
MS.gene019246.t1 AT2G40250 29.315 365 218 13 3 350 9 350 1.90e-31 122
MS.gene019246.t1 AT5G40990 30.645 372 218 14 4 358 11 359 2.81e-31 122
MS.gene019246.t1 AT3G14225 28.198 344 210 11 29 357 37 358 5.02e-31 121
MS.gene019246.t1 AT3G14225 28.198 344 214 11 29 357 37 362 4.12e-30 119
MS.gene019246.t1 AT1G71120 27.941 340 205 12 29 356 31 342 9.45e-30 117
MS.gene019246.t1 AT5G45950 30.904 343 194 13 29 358 40 352 1.02e-29 117
MS.gene019246.t1 AT3G62280 30.742 283 165 9 20 293 31 291 5.59e-28 111
MS.gene019246.t1 AT4G10950 28.116 345 212 14 25 356 66 387 6.04e-28 113
MS.gene019246.t1 AT1G75920 29.947 374 200 16 1 355 6 336 6.81e-28 112
MS.gene019246.t1 AT1G53920 29.132 357 212 15 29 370 48 378 9.42e-28 112
MS.gene019246.t1 AT1G53990 27.005 374 226 13 1 357 6 349 1.06e-27 112
MS.gene019246.t1 AT1G53940 31.214 346 199 14 29 358 39 361 3.46e-27 111
MS.gene019246.t1 AT1G06990 28.090 356 226 13 10 355 18 353 1.79e-26 108
MS.gene019246.t1 AT4G10950 27.826 345 209 15 25 356 66 383 1.90e-25 106
MS.gene019246.t1 AT1G20120 28.406 345 204 12 27 355 76 393 3.60e-25 105
MS.gene019246.t1 AT1G20132 28.909 339 206 13 29 355 61 376 6.21e-25 105
MS.gene019246.t1 AT2G03980 30.488 328 197 13 27 345 41 346 1.02e-24 103
MS.gene019246.t1 AT2G03980 30.488 328 197 13 27 345 41 346 1.02e-24 103
MS.gene019246.t1 AT2G03980 30.488 328 197 13 27 345 41 346 1.02e-24 103
MS.gene019246.t1 AT2G03980 30.488 328 197 13 27 345 41 346 1.02e-24 103
MS.gene019246.t1 AT1G75920 29.412 391 195 18 1 355 1 346 3.59e-24 102
MS.gene019246.t1 AT1G23500 28.242 347 198 14 28 360 34 343 3.84e-24 102
MS.gene019246.t1 AT1G73610 28.460 383 208 18 1 359 1 341 5.90e-24 101
MS.gene019246.t1 AT5G45960 26.648 349 201 15 29 353 47 364 1.47e-23 100
MS.gene019246.t1 AT5G15720 27.697 343 199 15 29 351 30 343 1.16e-22 98.2
MS.gene019246.t1 AT1G71250 26.901 342 219 12 29 360 41 361 1.42e-22 98.2
MS.gene019246.t1 AT2G04570 26.703 367 220 14 6 354 7 342 2.90e-22 97.1
MS.gene019246.t1 AT1G75920 29.283 321 167 14 55 355 28 308 3.31e-22 96.3
MS.gene019246.t1 AT2G42990 29.141 326 198 13 29 343 28 331 8.83e-22 95.5
MS.gene019246.t1 AT3G50400 28.756 386 210 18 3 358 10 360 1.18e-21 95.5
MS.gene019246.t1 AT4G01130 27.181 298 185 10 84 361 1 286 1.63e-21 94.0
MS.gene019246.t1 AT5G42170 30.120 332 206 11 29 354 50 361 1.77e-21 95.1
MS.gene019246.t1 AT5G08460 27.545 334 203 12 27 344 47 357 2.42e-21 94.7
MS.gene019246.t1 AT3G09930 26.113 337 217 10 20 349 30 341 4.02e-21 93.6
MS.gene019246.t1 AT3G09930 26.113 337 217 10 20 349 30 341 4.02e-21 93.6
MS.gene019246.t1 AT2G30310 29.781 366 212 18 3 350 8 346 4.26e-21 93.6
MS.gene019246.t1 AT1G75930 28.451 355 187 18 27 353 27 342 4.87e-21 93.2
MS.gene019246.t1 AT3G16370 27.434 339 210 13 29 354 30 345 7.05e-21 93.2
MS.gene019246.t1 AT1G58430 27.596 366 225 17 4 353 9 350 2.36e-20 91.7
MS.gene019246.t1 AT3G14820 29.204 339 199 14 29 354 32 342 3.21e-20 91.3
MS.gene019246.t1 AT3G04290 27.596 366 223 14 6 358 11 347 8.17e-20 90.1
MS.gene019246.t1 AT1G20135 25.740 338 198 12 27 349 27 326 1.20e-19 89.0
MS.gene019246.t1 AT5G03610 23.577 369 247 11 3 360 11 355 1.24e-19 89.4
MS.gene019246.t1 AT1G74460 26.835 395 216 17 3 367 6 357 1.88e-19 89.0
MS.gene019246.t1 AT1G20130 26.744 344 214 13 29 355 204 526 2.41e-19 89.7
MS.gene019246.t1 AT1G20130 26.744 344 214 13 29 355 184 506 2.94e-19 89.7
MS.gene019246.t1 AT1G29670 27.520 367 226 16 5 359 11 349 4.12e-19 88.2
MS.gene019246.t1 AT1G75880 27.297 370 230 14 4 355 20 368 5.39e-19 87.8
MS.gene019246.t1 AT5G22810 27.322 366 232 14 1 354 8 351 5.59e-19 87.8
MS.gene019246.t1 AT2G31540 28.977 352 206 17 20 353 25 350 7.52e-19 87.4
MS.gene019246.t1 AT1G75900 26.944 360 229 11 6 354 20 356 7.80e-19 87.4
MS.gene019246.t1 AT2G19010 28.696 345 195 16 31 361 62 369 9.24e-19 87.0
MS.gene019246.t1 AT1G54020 26.271 354 214 17 16 360 21 336 9.48e-19 87.0
MS.gene019246.t1 AT2G19010 28.696 345 195 16 31 361 32 339 9.81e-19 86.7
MS.gene019246.t1 AT1G75920 27.049 366 190 14 1 355 6 305 1.02e-18 86.3
MS.gene019246.t1 AT1G59406 27.224 371 225 15 1 355 1 342 1.12e-18 86.7
MS.gene019246.t1 AT1G59030 27.224 371 225 15 1 355 1 342 1.12e-18 86.7
MS.gene019246.t1 AT1G58725 27.224 371 225 15 1 355 1 342 1.12e-18 86.7
MS.gene019246.t1 AT1G29670 27.049 366 229 16 5 359 79 417 1.27e-18 87.4
MS.gene019246.t1 AT1G75910 26.005 373 212 16 3 355 8 336 1.30e-18 86.3
MS.gene019246.t1 AT1G75880 27.688 372 225 16 4 355 20 367 2.31e-18 85.9
MS.gene019246.t1 AT4G26790 26.163 344 213 12 27 355 27 344 2.58e-18 85.5
MS.gene019246.t1 AT4G26790 26.163 344 213 12 27 355 27 344 2.58e-18 85.5
MS.gene019246.t1 AT1G75890 27.507 349 212 13 29 355 47 376 4.16e-18 85.1
MS.gene019246.t1 AT5G33370 26.012 346 211 14 28 356 29 346 4.36e-18 85.1
MS.gene019246.t1 AT5G15720 26.667 285 167 11 29 293 30 292 6.07e-18 84.0
MS.gene019246.t1 AT5G03820 26.230 366 238 15 1 354 4 349 7.39e-18 84.3
MS.gene019246.t1 AT5G55050 27.941 340 201 15 29 349 39 353 1.20e-17 84.0
MS.gene019246.t1 AT5G03820 26.230 366 238 15 1 354 32 377 2.02e-17 83.2
MS.gene019246.t1 AT1G71691 26.989 352 194 14 29 356 55 367 2.63e-17 82.8
MS.gene019246.t1 AT3G14220 24.384 365 223 16 5 356 13 337 6.04e-17 81.6
MS.gene019246.t1 AT1G53940 29.964 277 166 10 28 293 38 297 8.18e-17 80.5
MS.gene019246.t1 AT3G53100 26.627 338 213 14 29 354 29 343 8.62e-17 81.3
MS.gene019246.t1 AT2G30220 27.913 369 214 17 3 350 8 345 8.96e-17 81.3
MS.gene019246.t1 AT5G63170 25.816 337 189 14 29 346 28 322 9.36e-17 80.9
MS.gene019246.t1 AT2G19060 27.089 347 200 15 31 361 32 341 1.38e-16 80.5
MS.gene019246.t1 AT2G24560 25.429 350 223 14 19 353 23 349 2.69e-16 79.7
MS.gene019246.t1 AT1G54010 24.928 349 213 16 25 360 32 344 2.73e-16 80.1
MS.gene019246.t1 AT5G37690 23.739 337 212 13 33 353 31 338 4.12e-16 79.3
MS.gene019246.t1 AT5G41890 25.706 354 208 13 31 356 33 359 8.16e-16 78.6
MS.gene019246.t1 AT1G58520 25.806 341 204 12 29 355 30 335 1.27e-15 77.8
MS.gene019246.t1 AT1G58525 25.806 341 204 12 29 355 30 335 1.27e-15 77.8
MS.gene019246.t1 AT5G03810 26.630 368 233 16 1 354 1 345 1.83e-15 77.4
MS.gene019246.t1 AT1G33811 23.925 372 237 16 1 351 4 350 2.91e-15 76.6
MS.gene019246.t1 AT1G29660 26.426 333 209 16 31 351 34 342 6.40e-15 75.9
MS.gene019246.t1 AT3G14210 24.713 348 218 12 18 353 25 340 1.39e-14 75.1
MS.gene019246.t1 AT5G03600 24.773 331 212 12 24 349 9 307 5.44e-14 72.4
MS.gene019246.t1 AT5G03600 24.773 331 212 12 24 349 44 342 9.84e-14 72.0
MS.gene019246.t1 AT5G15720 25.342 292 171 13 78 350 48 311 3.63e-13 70.1
MS.gene019246.t1 AT2G36325 24.324 333 215 11 30 354 48 351 3.90e-13 70.5
MS.gene019246.t1 AT5G45670 23.939 330 222 11 31 351 31 340 6.37e-13 69.7
MS.gene019246.t1 AT1G71691 27.106 273 143 10 29 277 55 295 7.90e-13 68.9
MS.gene019246.t1 AT3G43550 27.599 279 166 11 29 293 30 286 6.90e-12 65.9
MS.gene019246.t1 AT2G19050 26.301 346 198 15 31 357 33 340 1.53e-11 65.5
MS.gene019246.t1 AT5G37690 22.552 337 208 14 33 353 31 330 2.41e-11 64.7
MS.gene019246.t1 AT1G53970 51.515 66 29 1 29 91 20 85 4.62e-11 59.3
MS.gene019246.t1 AT1G53970 51.515 66 29 1 29 91 20 85 4.62e-11 59.3

Find 74 sgRNAs with CRISPR-Local

Find 94 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGAAAGGAGCAGGTTTA+AGG 0.171469 3.2:-40124242 None:intergenic
AAAGAGGATTATGATGAATT+TGG 0.194125 3.2:+40123754 MS.gene019246:CDS
CATCATAATCCTCTTTCTTC+TGG 0.251095 3.2:-40123747 None:intergenic
CATACCACCGTGACGCTAAT+TGG 0.297782 3.2:+40124088 MS.gene019246:CDS
TACGAAGCCATCTTTAACTT+TGG 0.316279 3.2:+40122789 MS.gene019246:CDS
CAAACAATCATTATTTATAG+TGG 0.326230 3.2:+40123397 MS.gene019246:CDS
TTTAGTATTACCTTTGCATA+TGG 0.350608 3.2:+40122729 MS.gene019246:CDS
TGCTTTCGGCAGAACATCTA+TGG 0.352248 3.2:+40122839 MS.gene019246:CDS
AAAGCATGTTGTGGAGGAAT+TGG 0.363705 3.2:+40124063 MS.gene019246:CDS
TCCCTTCTTTGTATCACCTT+GGG 0.363775 3.2:-40123110 None:intergenic
CGTAATTGATTCAACTATCA+AGG 0.368396 3.2:-40123489 None:intergenic
AAAGAGAATGAAAATCTTCA+TGG 0.368824 3.2:-40122709 None:intergenic
CTTGAAAGGAGCAGGTTTAA+GGG 0.370952 3.2:-40124241 None:intergenic
AGGACCTTCAATTAAACCTT+TGG 0.383976 3.2:-40124205 None:intergenic
TTTCTGTCGTAATGTCTCTA+TGG 0.389347 3.2:-40123833 None:intergenic
CTCCCTTCTTTGTATCACCT+TGG 0.391599 3.2:-40123111 None:intergenic
ATGGATAAAAGAAGTCCTTA+TGG 0.404744 3.2:+40122858 MS.gene019246:CDS
TTATTTATAGTGGGAGAGAT+TGG 0.406970 3.2:+40123407 MS.gene019246:CDS
TATGAAGCACCACAACAATA+TGG 0.415657 3.2:+40123910 MS.gene019246:CDS
TGAGATATAACATACATTGA+TGG 0.429821 3.2:-40123516 None:intergenic
TTGAAATACGTTGAACCATA+AGG 0.431464 3.2:-40122873 None:intergenic
GCAGTTGAGCTAGTGGTTCC+AGG 0.432330 3.2:+40123676 MS.gene019246:CDS
TATCAGTCATTAATTGAAGA+AGG 0.436219 3.2:+40123652 MS.gene019246:intron
TAGACTATCTTGAAAGGAGC+AGG 0.441952 3.2:-40124249 None:intergenic
CGACTCATCATAGATTTCAT+AGG 0.447348 3.2:+40122924 MS.gene019246:CDS
CATCCCATTGGAAAGTTACC+TGG 0.451479 3.2:-40123694 None:intergenic
ATAGCCAAAGGTTTAATTGA+AGG 0.457396 3.2:+40124201 MS.gene019246:CDS
TGTAGGCTTTACTTCTGATA+AGG 0.458739 3.2:+40124029 MS.gene019246:intron
TGGTGCTTCATATAAACGTT+TGG 0.458875 3.2:-40123899 None:intergenic
TATTTGCTTATATGCTGCTT+CGG 0.461985 3.2:-40124181 None:intergenic
GACACGGGAAACGCTGCTTT+CGG 0.463262 3.2:+40122825 MS.gene019246:CDS
TTAAATGTAGCTGAGGCATA+CGG 0.480816 3.2:+40123049 MS.gene019246:intron
TTATTGTGTAAAAGCAAAGA+AGG 0.488816 3.2:+40123262 MS.gene019246:CDS
ACGTATTTCAAACATCCAAC+GGG 0.490382 3.2:+40122885 MS.gene019246:CDS
CGTTGAGTGTGCAATTTGAC+TGG 0.498847 3.2:+40123221 MS.gene019246:CDS
AAACAATCATTATTTATAGT+GGG 0.503187 3.2:+40123398 MS.gene019246:CDS
CTTTACTTCTGATAAGGTCG+AGG 0.512775 3.2:+40124035 MS.gene019246:CDS
CAATTAGCGTCACGGTGGTA+TGG 0.513008 3.2:-40124087 None:intergenic
AGAGTCACCAAAGTTAAAGA+TGG 0.513197 3.2:-40122796 None:intergenic
TTTATAGTGGGAGAGATTGG+TGG 0.518109 3.2:+40123410 MS.gene019246:CDS
GCTAATTGGTGTGGAATGCC+TGG 0.524013 3.2:+40124102 MS.gene019246:CDS
AAAGGAGCAGGTTTAAGGGA+TGG 0.527635 3.2:-40124237 None:intergenic
GTTCCAGGTAACTTTCCAAT+GGG 0.527784 3.2:+40123691 MS.gene019246:CDS
TTGTTGACATTTAAAGAGGC+CGG 0.532940 3.2:-40123085 None:intergenic
AACCCAAGGTGATACAAAGA+AGG 0.534379 3.2:+40123108 MS.gene019246:CDS
AACGTATTTCAAACATCCAA+CGG 0.542080 3.2:+40122884 MS.gene019246:CDS
AAAGATTAGCCAGAAGAAAG+AGG 0.542962 3.2:+40123738 MS.gene019246:CDS
AGAAGGAGCAGTTGAGCTAG+TGG 0.543690 3.2:+40123669 MS.gene019246:CDS
AAGATGGCTTCGTATGGTAG+AGG 0.549261 3.2:-40122780 None:intergenic
GGTTCCAGGTAACTTTCCAA+TGG 0.550612 3.2:+40123690 MS.gene019246:CDS
ATGTCAACATTGCATCCCAT+TGG 0.563361 3.2:-40123706 None:intergenic
TTAAGGGATGGATTTGCAGA+AGG 0.566452 3.2:-40124225 None:intergenic
CCATCTGACATGCGTCCCGT+TGG 0.567012 3.2:-40122900 None:intergenic
TAAATGTAGCTGAGGCATAC+GGG 0.568105 3.2:+40123050 MS.gene019246:intron
CCAACGGGACGCATGTCAGA+TGG 0.570122 3.2:+40122900 MS.gene019246:CDS
GTAATTGATTCAACTATCAA+GGG 0.575388 3.2:-40123488 None:intergenic
CACCGTGACGCTAATTGGTG+TGG 0.579361 3.2:+40124093 MS.gene019246:CDS
CAATTCTAGACTATCTTGAA+AGG 0.579606 3.2:-40124255 None:intergenic
TCAGAGCAAACTGTTGTACC+AGG 0.580648 3.2:-40124120 None:intergenic
CTTTACACACCATATTGTTG+TGG 0.589049 3.2:-40123919 None:intergenic
CTCAACGAGTTATTTGTCGC+GGG 0.589753 3.2:-40123205 None:intergenic
AAGTTAAAGATGGCTTCGTA+TGG 0.591022 3.2:-40122786 None:intergenic
TTAAATGTCAACAAAACCCA+AGG 0.608608 3.2:+40123094 MS.gene019246:CDS
TTATTATGATCGTAGTGGAG+TGG 0.617629 3.2:+40123177 MS.gene019246:CDS
TGGTGACTCTACAAGTGACA+CGG 0.631100 3.2:+40122809 MS.gene019246:CDS
AAATATACTATCTTAGCTTG+AGG 0.634484 3.2:-40123859 None:intergenic
GCATATAAGCAAATAGCCAA+AGG 0.635574 3.2:+40124189 MS.gene019246:CDS
TATGCTGCTTCGGTTAAGTG+AGG 0.639327 3.2:-40124171 None:intergenic
ACCCAAGGTGATACAAAGAA+GGG 0.642631 3.2:+40123109 MS.gene019246:CDS
TTCCACACCAATTAGCGTCA+CGG 0.646318 3.2:-40124095 None:intergenic
ACTCAACGAGTTATTTGTCG+CGG 0.663418 3.2:-40123206 None:intergenic
AAATATTATTATGATCGTAG+TGG 0.675398 3.2:+40123172 MS.gene019246:CDS
GGTGACTCTACAAGTGACAC+GGG 0.677598 3.2:+40122810 MS.gene019246:CDS
CACACCAATTAGCGTCACGG+TGG 0.757662 3.2:-40124092 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAATCATTATTTATAGT+GGG + chr3.2:40123398-40123417 MS.gene019246:CDS 15.0%
!! ATATAATCTATAACTTAAAG+AGG - chr3.2:40123582-40123601 None:intergenic 15.0%
!!! TCAAAACTAATAAATTTTGA+TGG + chr3.2:40124147-40124166 MS.gene019246:CDS 15.0%
!!! TCAAAATTTATTAGTTTTGA+AGG - chr3.2:40124147-40124166 None:intergenic 15.0%
!! AAATATTATTATGATCGTAG+TGG + chr3.2:40123172-40123191 MS.gene019246:CDS 20.0%
!! CAAACAATCATTATTTATAG+TGG + chr3.2:40123397-40123416 MS.gene019246:CDS 20.0%
!! TATTATTTGTGTCAAATTCA+TGG + chr3.2:40123306-40123325 MS.gene019246:intron 20.0%
!!! TTTTAAAAATCCATATGCAA+AGG - chr3.2:40122742-40122761 None:intergenic 20.0%
! AAAGAGGATTATGATGAATT+TGG + chr3.2:40123754-40123773 MS.gene019246:CDS 25.0%
! AATAAATCGTAAGCTTAACA+AGG - chr3.2:40123959-40123978 None:intergenic 25.0%
! TATCAGTCATTAATTGAAGA+AGG + chr3.2:40123652-40123671 MS.gene019246:intron 25.0%
! TGAGATATAACATACATTGA+TGG - chr3.2:40123519-40123538 None:intergenic 25.0%
! TTATTGTGTAAAAGCAAAGA+AGG + chr3.2:40123262-40123281 MS.gene019246:CDS 25.0%
! TTTAGTATTACCTTTGCATA+TGG + chr3.2:40122729-40122748 MS.gene019246:CDS 25.0%
! TTTATGTGCATTAATGATGT+AGG + chr3.2:40124012-40124031 MS.gene019246:intron 25.0%
!! AAATATACTATCTTAGCTTG+AGG - chr3.2:40123862-40123881 None:intergenic 25.0%
!! GTAATTGATTCAACTATCAA+GGG - chr3.2:40123491-40123510 None:intergenic 25.0%
!!! TCTTTGCTTTTACACAATAA+GGG - chr3.2:40123262-40123281 None:intergenic 25.0%
!!! TGTTATTTTAAATGTAGCTG+AGG + chr3.2:40123042-40123061 MS.gene019246:intron 25.0%
!!! TTCTTTGCTTTTACACAATA+AGG - chr3.2:40123263-40123282 None:intergenic 25.0%
AACGTATTTCAAACATCCAA+CGG + chr3.2:40122884-40122903 MS.gene019246:CDS 30.0%
ATAGCCAAAGGTTTAATTGA+AGG + chr3.2:40124201-40124220 MS.gene019246:CDS 30.0%
ATGGATAAAAGAAGTCCTTA+TGG + chr3.2:40122858-40122877 MS.gene019246:CDS 30.0%
CAAATAATATGCAAGAAGGT+AGG - chr3.2:40123295-40123314 None:intergenic 30.0%
GACACAAATAATATGCAAGA+AGG - chr3.2:40123299-40123318 None:intergenic 30.0%
TTAAATGTCAACAAAACCCA+AGG + chr3.2:40123094-40123113 MS.gene019246:CDS 30.0%
TTAATGCACATAAACTAGTG+AGG - chr3.2:40124006-40124025 None:intergenic 30.0%
TTGAAATACGTTGAACCATA+AGG - chr3.2:40122876-40122895 None:intergenic 30.0%
! AAGGGAGTTAATTTTGCTTT+TGG + chr3.2:40123127-40123146 MS.gene019246:CDS 30.0%
! CGTAATTGATTCAACTATCA+AGG - chr3.2:40123492-40123511 None:intergenic 30.0%
! TATTTGCTTATATGCTGCTT+CGG - chr3.2:40124184-40124203 None:intergenic 30.0%
! TTATTTATAGTGGGAGAGAT+TGG + chr3.2:40123407-40123426 MS.gene019246:CDS 30.0%
!!! GGTTTTGTTGACATTTAAAG+AGG - chr3.2:40123092-40123111 None:intergenic 30.0%
AAGTTAAAGATGGCTTCGTA+TGG - chr3.2:40122789-40122808 None:intergenic 35.0%
ACGTATTTCAAACATCCAAC+GGG + chr3.2:40122885-40122904 MS.gene019246:CDS 35.0%
AGAGTCACCAAAGTTAAAGA+TGG - chr3.2:40122799-40122818 None:intergenic 35.0%
AGGACCTTCAATTAAACCTT+TGG - chr3.2:40124208-40124227 None:intergenic 35.0%
CATCATAATCCTCTTTCTTC+TGG - chr3.2:40123750-40123769 None:intergenic 35.0%
CGACTCATCATAGATTTCAT+AGG + chr3.2:40122924-40122943 MS.gene019246:CDS 35.0%
CTTTACACACCATATTGTTG+TGG - chr3.2:40123922-40123941 None:intergenic 35.0%
GCATATAAGCAAATAGCCAA+AGG + chr3.2:40124189-40124208 MS.gene019246:CDS 35.0%
TGGTGCTTCATATAAACGTT+TGG - chr3.2:40123902-40123921 None:intergenic 35.0%
TGTAGGCTTTACTTCTGATA+AGG + chr3.2:40124029-40124048 MS.gene019246:intron 35.0%
TTAAATGTAGCTGAGGCATA+CGG + chr3.2:40123049-40123068 MS.gene019246:intron 35.0%
TTGTTGACATTTAAAGAGGC+CGG - chr3.2:40123088-40123107 None:intergenic 35.0%
TTTCTGTCGTAATGTCTCTA+TGG - chr3.2:40123836-40123855 None:intergenic 35.0%
! AAAGATTAGCCAGAAGAAAG+AGG + chr3.2:40123738-40123757 MS.gene019246:CDS 35.0%
! TACGAAGCCATCTTTAACTT+TGG + chr3.2:40122789-40122808 MS.gene019246:CDS 35.0%
! TATGAAGCACCACAACAATA+TGG + chr3.2:40123910-40123929 MS.gene019246:CDS 35.0%
! TTATTATGATCGTAGTGGAG+TGG + chr3.2:40123177-40123196 MS.gene019246:CDS 35.0%
!! GGAGTTAATTTTGCTTTTGG+AGG + chr3.2:40123130-40123149 MS.gene019246:CDS 35.0%
AAAGCATGTTGTGGAGGAAT+TGG + chr3.2:40124063-40124082 MS.gene019246:CDS 40.0%
AACCCAAGGTGATACAAAGA+AGG + chr3.2:40123108-40123127 MS.gene019246:CDS 40.0%
ACCCAAGGTGATACAAAGAA+GGG + chr3.2:40123109-40123128 MS.gene019246:CDS 40.0%
ACTCAACGAGTTATTTGTCG+CGG - chr3.2:40123209-40123228 None:intergenic 40.0%
ATGTCAACATTGCATCCCAT+TGG - chr3.2:40123709-40123728 None:intergenic 40.0%
CTTGAAAGGAGCAGGTTTAA+GGG - chr3.2:40124244-40124263 None:intergenic 40.0%
CTTTACTTCTGATAAGGTCG+AGG + chr3.2:40124035-40124054 MS.gene019246:CDS 40.0%
GCACATAAACTAGTGAGGAT+GGG - chr3.2:40124001-40124020 None:intergenic 40.0%
GTTCCAGGTAACTTTCCAAT+GGG + chr3.2:40123691-40123710 MS.gene019246:CDS 40.0%
TAAATGTAGCTGAGGCATAC+GGG + chr3.2:40123050-40123069 MS.gene019246:intron 40.0%
TAGACTATCTTGAAAGGAGC+AGG - chr3.2:40124252-40124271 None:intergenic 40.0%
TCCCTTCTTTGTATCACCTT+GGG - chr3.2:40123113-40123132 None:intergenic 40.0%
TCTTGAAAGGAGCAGGTTTA+AGG - chr3.2:40124245-40124264 None:intergenic 40.0%
TGCACATAAACTAGTGAGGA+TGG - chr3.2:40124002-40124021 None:intergenic 40.0%
TTTAAAGAGGCCGGCAAAAA+TGG - chr3.2:40123079-40123098 None:intergenic 40.0%
! TTAAGGGATGGATTTGCAGA+AGG - chr3.2:40124228-40124247 None:intergenic 40.0%
! TTTATAGTGGGAGAGATTGG+TGG + chr3.2:40123410-40123429 MS.gene019246:CDS 40.0%
!!! GAGGTTTTGAAAGCATGTTG+TGG + chr3.2:40124054-40124073 MS.gene019246:CDS 40.0%
!!! GTTTTGAAAGCATGTTGTGG+AGG + chr3.2:40124057-40124076 MS.gene019246:CDS 40.0%
AAAGGAGCAGGTTTAAGGGA+TGG - chr3.2:40124240-40124259 None:intergenic 45.0%
AAGATGGCTTCGTATGGTAG+AGG - chr3.2:40122783-40122802 None:intergenic 45.0%
CATCCCATTGGAAAGTTACC+TGG - chr3.2:40123697-40123716 None:intergenic 45.0%
CGTTGAGTGTGCAATTTGAC+TGG + chr3.2:40123221-40123240 MS.gene019246:CDS 45.0%
CTCAACGAGTTATTTGTCGC+GGG - chr3.2:40123208-40123227 None:intergenic 45.0%
CTCCCTTCTTTGTATCACCT+TGG - chr3.2:40123114-40123133 None:intergenic 45.0%
GGTTCCAGGTAACTTTCCAA+TGG + chr3.2:40123690-40123709 MS.gene019246:CDS 45.0%
TCAGAGCAAACTGTTGTACC+AGG - chr3.2:40124123-40124142 None:intergenic 45.0%
TGCTTTCGGCAGAACATCTA+TGG + chr3.2:40122839-40122858 MS.gene019246:CDS 45.0%
TGGTGACTCTACAAGTGACA+CGG + chr3.2:40122809-40122828 MS.gene019246:CDS 45.0%
TTCCACACCAATTAGCGTCA+CGG - chr3.2:40124098-40124117 None:intergenic 45.0%
! TATGCTGCTTCGGTTAAGTG+AGG - chr3.2:40124174-40124193 None:intergenic 45.0%
!!! ATACGGGTTGCCATTTTTGC+CGG + chr3.2:40123066-40123085 MS.gene019246:CDS 45.0%
AGAAGGAGCAGTTGAGCTAG+TGG + chr3.2:40123669-40123688 MS.gene019246:CDS 50.0%
CAATTAGCGTCACGGTGGTA+TGG - chr3.2:40124090-40124109 None:intergenic 50.0%
CATACCACCGTGACGCTAAT+TGG + chr3.2:40124088-40124107 MS.gene019246:CDS 50.0%
GCTAATTGGTGTGGAATGCC+TGG + chr3.2:40124102-40124121 MS.gene019246:CDS 50.0%
GGTGACTCTACAAGTGACAC+GGG + chr3.2:40122810-40122829 MS.gene019246:CDS 50.0%
CACACCAATTAGCGTCACGG+TGG - chr3.2:40124095-40124114 None:intergenic 55.0%
CACCGTGACGCTAATTGGTG+TGG + chr3.2:40124093-40124112 MS.gene019246:CDS 55.0%
GCAGTTGAGCTAGTGGTTCC+AGG + chr3.2:40123676-40123695 MS.gene019246:CDS 55.0%
! GACACGGGAAACGCTGCTTT+CGG + chr3.2:40122825-40122844 MS.gene019246:CDS 55.0%
CCAACGGGACGCATGTCAGA+TGG + chr3.2:40122900-40122919 MS.gene019246:CDS 60.0%
CCATCTGACATGCGTCCCGT+TGG - chr3.2:40122903-40122922 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 40122711 40124272 40122711 ID=MS.gene019246
chr3.2 mRNA 40122711 40124272 40122711 ID=MS.gene019246.t1;Parent=MS.gene019246
chr3.2 exon 40122711 40122945 40122711 ID=MS.gene019246.t1.exon1;Parent=MS.gene019246.t1
chr3.2 CDS 40122711 40122945 40122711 ID=cds.MS.gene019246.t1;Parent=MS.gene019246.t1
chr3.2 exon 40123059 40123283 40123059 ID=MS.gene019246.t1.exon2;Parent=MS.gene019246.t1
chr3.2 CDS 40123059 40123283 40123059 ID=cds.MS.gene019246.t1;Parent=MS.gene019246.t1
chr3.2 exon 40123381 40123523 40123381 ID=MS.gene019246.t1.exon3;Parent=MS.gene019246.t1
chr3.2 CDS 40123381 40123523 40123381 ID=cds.MS.gene019246.t1;Parent=MS.gene019246.t1
chr3.2 exon 40123658 40123931 40123658 ID=MS.gene019246.t1.exon4;Parent=MS.gene019246.t1
chr3.2 CDS 40123658 40123931 40123658 ID=cds.MS.gene019246.t1;Parent=MS.gene019246.t1
chr3.2 exon 40124034 40124272 40124034 ID=MS.gene019246.t1.exon5;Parent=MS.gene019246.t1
chr3.2 CDS 40124034 40124272 40124034 ID=cds.MS.gene019246.t1;Parent=MS.gene019246.t1
Gene Sequence

>MS.gene019246

ATGAAGATTTTCATTCTCTTTAGTATTACCTTTGCATATGGATTTTTAAAAATTGTTTCTAATGCTAATCCTCTACCATACGAAGCCATCTTTAACTTTGGTGACTCTACAAGTGACACGGGAAACGCTGCTTTCGGCAGAACATCTATGGATAAAAGAAGTCCTTATGGTTCAACGTATTTCAAACATCCAACGGGACGCATGTCAGATGGACGACTCATCATAGATTTCATAGGTAATTTTACAACTCTTTTTTTTTTTGTTTCTTAAATTGAAAATCAATAATTTTAAATGTTGATACATTTCTAATTCAAAAAAATCATTTGCTCATTGTTATTTTAAATGTAGCTGAGGCATACGGGTTGCCATTTTTGCCGGCCTCTTTAAATGTCAACAAAACCCAAGGTGATACAAAGAAGGGAGTTAATTTTGCTTTTGGAGGTTCTACTGCTCTTGATAGCAAATATTATTATGATCGTAGTGGAGTGGATAAACCCGCGACAAATAACTCGTTGAGTGTGCAATTTGACTGGTTTAAAAATCTAAAACCCTTATTGTGTAAAAGCAAAGAAGGTTTTTCTCCTACCTTCTTGCATATTATTTGTGTCAAATTCATGGATTTTTCTCTATATGACTAACAAAACTTTTTTTTTTTTTTTTGAAATCACAGAGTGTGATAACTTCTTCAAACAATCATTATTTATAGTGGGAGAGATTGGTGGAAATGATGTTTTTTTACATATTAATAAAACTATTACAGAATTGCGAGAGATTGTTCCCTTGATAGTTGAATCAATTACGAAGACCATCAATGTATGTTATATCTCAGATATAAGTAATTAAATAAATACTTCGACTCTAGAATAATCCTCTTTAAGTTATAGATTATATTGAAAAATAATAATCTGAAAAAATGTAATTGTGATTTATTTAATTTTTCTTATCAGTCATTAATTGAAGAAGGAGCAGTTGAGCTAGTGGTTCCAGGTAACTTTCCAATGGGATGCAATGTTGACATATTAACAAAAAAGATTAGCCAGAAGAAAGAGGATTATGATGAATTTGGATGTTTGATAGCTTACAACTCTTTCATCGAATACTTTAATGAGCAACTAAAAAAATCCATAGAGACATTACGACAGAAACATCCTCAAGCTAAGATAGTATATTTTGACTACTACAGCAATGCCAAACGTTTATATGAAGCACCACAACAATATGGTGTGTAAAGCAATTATTTTACTTCCTTGTTAAGCTTACGATTTATTGTTGACAAATTCATTTGATCCCATCCTCACTAGTTTATGTGCATTAATGATGTAGGCTTTACTTCTGATAAGGTCGAGGTTTTGAAAGCATGTTGTGGAGGAATTGGACCATACCACCGTGACGCTAATTGGTGTGGAATGCCTGGTACAACAGTTTGCTCTGATCCTTCAAAACTAATAAATTTTGATGGACCTCACTTAACCGAAGCAGCATATAAGCAAATAGCCAAAGGTTTAATTGAAGGTCCTTCTGCAAATCCATCCCTTAAACCTGCTCCTTTCAAGATAGTCTAG
Protein sequence

>MS.gene019246.t1

MKIFILFSITFAYGFLKIVSNANPLPYEAIFNFGDSTSDTGNAAFGRTSMDKRSPYGSTYFKHPTGRMSDGRLIIDFIAEAYGLPFLPASLNVNKTQGDTKKGVNFAFGGSTALDSKYYYDRSGVDKPATNNSLSVQFDWFKNLKPLLCKSKEECDNFFKQSLFIVGEIGGNDVFLHINKTITELREIVPLIVESITKTINSLIEEGAVELVVPGNFPMGCNVDILTKKISQKKEDYDEFGCLIAYNSFIEYFNEQLKKSIETLRQKHPQAKIVYFDYYSNAKRLYEAPQQYGFTSDKVEVLKACCGGIGPYHRDANWCGMPGTTVCSDPSKLINFDGPHLTEAAYKQIAKGLIEGPSANPSLKPAPFKIV