Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020162.t1 | AFK47146.1 | 95.5 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 1.90E-252 | 881.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020162.t1 | Q39202 | 40.2 | 458 | 240 | 16 | 9 | 445 | 11 | 455 | 1.7e-81 | 304.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020162.t1 | I3T3Q4 | 95.5 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 1.3e-252 | 881.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020162 | MS.gene47070 | PPI |
| MS.gene020162 | MS.gene55432 | PPI |
| MS.gene074164 | MS.gene020162 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020162.t1 | MTR_8g011430 | 97.412 | 425 | 11 | 0 | 22 | 446 | 28 | 452 | 0.0 | 859 |
| MS.gene020162.t1 | MTR_8g011370 | 78.723 | 423 | 85 | 2 | 16 | 437 | 17 | 435 | 0.0 | 697 |
| MS.gene020162.t1 | MTR_8g011410 | 76.168 | 428 | 97 | 2 | 20 | 446 | 21 | 444 | 0.0 | 675 |
| MS.gene020162.t1 | MTR_8g011377 | 65.947 | 417 | 83 | 3 | 18 | 434 | 254 | 611 | 0.0 | 541 |
| MS.gene020162.t1 | MTR_8g011377 | 59.075 | 281 | 67 | 3 | 157 | 437 | 14 | 246 | 7.29e-102 | 317 |
| MS.gene020162.t1 | MTR_8g011440 | 63.658 | 421 | 113 | 6 | 21 | 434 | 38 | 425 | 3.98e-169 | 506 |
| MS.gene020162.t1 | MTR_8g011440 | 71.268 | 355 | 91 | 5 | 41 | 392 | 828 | 1174 | 6.85e-165 | 496 |
| MS.gene020162.t1 | MTR_2g067990 | 43.675 | 419 | 231 | 5 | 27 | 442 | 237 | 653 | 1.36e-116 | 365 |
| MS.gene020162.t1 | MTR_2g067980 | 43.165 | 417 | 232 | 5 | 28 | 442 | 261 | 674 | 1.55e-112 | 355 |
| MS.gene020162.t1 | MTR_5g013130 | 41.404 | 413 | 216 | 12 | 45 | 441 | 40 | 442 | 8.37e-101 | 318 |
| MS.gene020162.t1 | MTR_5g013070 | 37.879 | 462 | 257 | 14 | 1 | 446 | 1 | 448 | 3.71e-97 | 309 |
| MS.gene020162.t1 | MTR_2g068650 | 37.995 | 429 | 209 | 6 | 13 | 440 | 17 | 389 | 3.41e-94 | 300 |
| MS.gene020162.t1 | MTR_2g067970 | 43.077 | 325 | 173 | 8 | 27 | 341 | 196 | 518 | 9.73e-79 | 262 |
| MS.gene020162.t1 | MTR_5g006160 | 32.314 | 458 | 261 | 22 | 1 | 445 | 1 | 422 | 1.57e-47 | 174 |
| MS.gene020162.t1 | MTR_4g114270 | 33.168 | 404 | 238 | 17 | 41 | 431 | 51 | 435 | 1.31e-43 | 163 |
| MS.gene020162.t1 | MTR_4g114250 | 29.911 | 448 | 267 | 19 | 8 | 431 | 13 | 437 | 1.11e-40 | 155 |
| MS.gene020162.t1 | MTR_4g114240 | 30.394 | 431 | 261 | 16 | 8 | 417 | 16 | 428 | 2.70e-35 | 139 |
| MS.gene020162.t1 | MTR_1g104555 | 28.052 | 385 | 197 | 14 | 45 | 418 | 13 | 328 | 4.77e-32 | 129 |
| MS.gene020162.t1 | MTR_3g031490 | 27.644 | 416 | 265 | 12 | 33 | 435 | 24 | 416 | 5.61e-32 | 129 |
| MS.gene020162.t1 | MTR_3g102400 | 28.471 | 425 | 270 | 16 | 31 | 443 | 29 | 431 | 6.83e-32 | 129 |
| MS.gene020162.t1 | MTR_3g031600 | 28.256 | 453 | 278 | 15 | 3 | 442 | 8 | 426 | 5.00e-31 | 126 |
| MS.gene020162.t1 | MTR_4g114280 | 29.149 | 470 | 272 | 17 | 3 | 432 | 12 | 460 | 9.18e-31 | 125 |
| MS.gene020162.t1 | MTR_3g031640 | 28.744 | 414 | 260 | 12 | 33 | 433 | 24 | 415 | 1.14e-30 | 125 |
| MS.gene020162.t1 | MTR_3g031610 | 28.837 | 430 | 263 | 12 | 33 | 446 | 24 | 426 | 4.39e-30 | 124 |
| MS.gene020162.t1 | MTR_3g031580 | 28.571 | 413 | 242 | 15 | 44 | 439 | 38 | 414 | 2.42e-29 | 121 |
| MS.gene020162.t1 | MTR_3g031480 | 29.111 | 371 | 236 | 12 | 33 | 395 | 27 | 378 | 3.26e-28 | 118 |
| MS.gene020162.t1 | MTR_7g092050 | 28.205 | 390 | 233 | 16 | 45 | 423 | 45 | 398 | 3.04e-27 | 115 |
| MS.gene020162.t1 | MTR_3g031470 | 26.214 | 412 | 249 | 11 | 5 | 396 | 9 | 385 | 1.90e-26 | 113 |
| MS.gene020162.t1 | MTR_1g099400 | 25.556 | 450 | 274 | 19 | 26 | 436 | 13 | 440 | 1.93e-26 | 113 |
| MS.gene020162.t1 | MTR_4g094858 | 24.670 | 454 | 290 | 18 | 1 | 435 | 1 | 421 | 1.36e-21 | 98.2 |
| MS.gene020162.t1 | MTR_3g031500 | 28.883 | 367 | 219 | 13 | 82 | 439 | 2 | 335 | 2.94e-21 | 97.1 |
| MS.gene020162.t1 | MTR_2g089360 | 25.943 | 424 | 246 | 18 | 3 | 397 | 8 | 392 | 4.86e-21 | 96.7 |
| MS.gene020162.t1 | MTR_7g058830 | 23.593 | 462 | 309 | 17 | 1 | 446 | 1 | 434 | 2.16e-20 | 94.7 |
| MS.gene020162.t1 | MTR_7g058550 | 26.044 | 407 | 258 | 16 | 44 | 435 | 43 | 421 | 3.50e-20 | 94.0 |
| MS.gene020162.t1 | MTR_7g053050 | 23.831 | 449 | 300 | 17 | 1 | 435 | 1 | 421 | 8.96e-20 | 92.8 |
| MS.gene020162.t1 | MTR_4g081650 | 26.406 | 409 | 255 | 17 | 1 | 395 | 1 | 377 | 9.52e-20 | 92.8 |
| MS.gene020162.t1 | MTR_7g058530 | 24.276 | 449 | 292 | 13 | 1 | 433 | 4 | 420 | 3.04e-19 | 90.9 |
| MS.gene020162.t1 | MTR_8g465580 | 27.143 | 420 | 235 | 19 | 3 | 396 | 9 | 383 | 1.53e-18 | 88.6 |
| MS.gene020162.t1 | MTR_3g107070 | 27.717 | 368 | 217 | 18 | 43 | 401 | 33 | 360 | 2.62e-18 | 88.2 |
| MS.gene020162.t1 | MTR_0280s0040 | 23.832 | 428 | 261 | 15 | 1 | 400 | 7 | 397 | 5.22e-18 | 87.4 |
| MS.gene020162.t1 | MTR_2g011170 | 25.481 | 416 | 245 | 20 | 10 | 396 | 3 | 382 | 1.01e-17 | 85.9 |
| MS.gene020162.t1 | MTR_2g011170 | 25.783 | 415 | 245 | 21 | 10 | 396 | 3 | 382 | 1.34e-17 | 85.9 |
| MS.gene020162.t1 | MTR_4g081750 | 25.672 | 409 | 258 | 16 | 1 | 395 | 1 | 377 | 5.65e-17 | 84.3 |
| MS.gene020162.t1 | MTR_4g081665 | 24.814 | 403 | 264 | 14 | 6 | 395 | 1 | 377 | 1.47e-16 | 82.8 |
| MS.gene020162.t1 | MTR_8g465410 | 26.202 | 416 | 245 | 18 | 6 | 396 | 5 | 383 | 1.98e-16 | 82.4 |
| MS.gene020162.t1 | MTR_2g011210 | 25.124 | 402 | 255 | 15 | 22 | 406 | 28 | 400 | 2.26e-16 | 82.0 |
| MS.gene020162.t1 | MTR_2g011190 | 25.542 | 415 | 258 | 16 | 10 | 406 | 13 | 394 | 2.53e-16 | 82.0 |
| MS.gene020162.t1 | MTR_4g091780 | 25.109 | 458 | 282 | 19 | 5 | 433 | 12 | 437 | 6.98e-16 | 80.5 |
| MS.gene020162.t1 | MTR_8g465990 | 25.428 | 409 | 265 | 14 | 6 | 397 | 3 | 388 | 9.62e-16 | 80.1 |
| MS.gene020162.t1 | MTR_4g091760 | 27.763 | 389 | 229 | 18 | 44 | 405 | 39 | 402 | 1.13e-15 | 80.1 |
| MS.gene020162.t1 | MTR_2g011150 | 24.668 | 377 | 223 | 16 | 44 | 395 | 43 | 383 | 1.19e-15 | 80.1 |
| MS.gene020162.t1 | MTR_8g465470 | 23.096 | 407 | 262 | 14 | 9 | 396 | 40 | 414 | 1.25e-15 | 79.7 |
| MS.gene020162.t1 | MTR_8g465990 | 25.428 | 409 | 265 | 14 | 6 | 397 | 3 | 388 | 1.35e-15 | 79.7 |
| MS.gene020162.t1 | MTR_8g465990 | 25.428 | 409 | 265 | 14 | 6 | 397 | 3 | 388 | 1.47e-15 | 79.7 |
| MS.gene020162.t1 | MTR_5g013050 | 36.893 | 103 | 58 | 3 | 224 | 320 | 55 | 156 | 3.27e-15 | 73.6 |
| MS.gene020162.t1 | MTR_3g051420 | 22.651 | 415 | 262 | 15 | 5 | 397 | 9 | 386 | 3.46e-15 | 78.6 |
| MS.gene020162.t1 | MTR_3g020230 | 25.132 | 378 | 225 | 17 | 44 | 397 | 44 | 387 | 3.58e-15 | 78.6 |
| MS.gene020162.t1 | MTR_2g011160 | 26.221 | 389 | 232 | 18 | 32 | 397 | 27 | 383 | 3.66e-15 | 78.2 |
| MS.gene020162.t1 | MTR_2g011160 | 26.221 | 389 | 232 | 18 | 32 | 397 | 27 | 383 | 3.88e-15 | 78.2 |
| MS.gene020162.t1 | MTR_2g081470 | 26.406 | 409 | 243 | 17 | 9 | 396 | 7 | 378 | 5.14e-15 | 77.8 |
| MS.gene020162.t1 | MTR_2g011280 | 22.727 | 484 | 296 | 20 | 1 | 445 | 6 | 450 | 6.02e-15 | 77.8 |
| MS.gene020162.t1 | MTR_2g089440 | 23.866 | 419 | 267 | 15 | 3 | 400 | 11 | 398 | 1.53e-14 | 76.6 |
| MS.gene020162.t1 | MTR_2g011340 | 23.029 | 482 | 290 | 23 | 3 | 445 | 11 | 450 | 1.88e-14 | 76.3 |
| MS.gene020162.t1 | MTR_8g465570 | 25.000 | 336 | 212 | 11 | 9 | 330 | 9 | 318 | 2.07e-14 | 75.9 |
| MS.gene020162.t1 | MTR_1g012550 | 25.728 | 412 | 249 | 21 | 43 | 441 | 57 | 424 | 2.21e-14 | 75.9 |
| MS.gene020162.t1 | MTR_3g007510 | 25.472 | 424 | 247 | 21 | 3 | 395 | 10 | 395 | 4.96e-14 | 74.7 |
| MS.gene020162.t1 | MTR_7g056420 | 23.218 | 435 | 270 | 18 | 44 | 444 | 380 | 784 | 5.26e-14 | 75.1 |
| MS.gene020162.t1 | MTR_3g007510 | 25.472 | 424 | 247 | 21 | 3 | 395 | 10 | 395 | 5.26e-14 | 74.7 |
| MS.gene020162.t1 | MTR_3g007510 | 25.472 | 424 | 247 | 21 | 3 | 395 | 10 | 395 | 5.46e-14 | 74.7 |
| MS.gene020162.t1 | MTR_7g056430 | 23.218 | 435 | 270 | 18 | 44 | 444 | 380 | 784 | 5.62e-14 | 74.7 |
| MS.gene020162.t1 | MTR_3g019420 | 23.298 | 382 | 227 | 15 | 44 | 397 | 41 | 384 | 6.89e-14 | 74.3 |
| MS.gene020162.t1 | MTR_3g019580 | 24.798 | 371 | 234 | 14 | 44 | 397 | 57 | 399 | 9.19e-14 | 73.9 |
| MS.gene020162.t1 | MTR_4g081685 | 25.061 | 407 | 256 | 18 | 12 | 395 | 6 | 386 | 9.73e-14 | 73.9 |
| MS.gene020162.t1 | MTR_3g019580 | 24.798 | 371 | 234 | 14 | 44 | 397 | 57 | 399 | 1.27e-13 | 73.6 |
| MS.gene020162.t1 | MTR_3g019580 | 24.798 | 371 | 234 | 14 | 44 | 397 | 57 | 399 | 1.44e-13 | 73.2 |
| MS.gene020162.t1 | MTR_2g089290 | 31.841 | 201 | 118 | 8 | 6 | 196 | 12 | 203 | 1.46e-13 | 73.6 |
| MS.gene020162.t1 | MTR_3g019580 | 24.798 | 371 | 234 | 14 | 44 | 397 | 54 | 396 | 1.59e-13 | 73.2 |
| MS.gene020162.t1 | MTR_0090s0020 | 24.339 | 378 | 251 | 14 | 32 | 396 | 25 | 380 | 1.71e-13 | 73.2 |
| MS.gene020162.t1 | MTR_3g020320 | 23.958 | 384 | 222 | 16 | 44 | 397 | 44 | 387 | 1.86e-13 | 73.2 |
| MS.gene020162.t1 | MTR_0090s0020 | 24.339 | 378 | 251 | 14 | 32 | 396 | 25 | 380 | 2.40e-13 | 72.8 |
| MS.gene020162.t1 | MTR_5g067290 | 25.538 | 372 | 223 | 15 | 44 | 400 | 45 | 377 | 2.54e-13 | 72.0 |
| MS.gene020162.t1 | MTR_0090s0020 | 24.339 | 378 | 251 | 14 | 32 | 396 | 25 | 380 | 2.56e-13 | 72.4 |
| MS.gene020162.t1 | MTR_2g011270 | 24.672 | 381 | 236 | 15 | 51 | 406 | 31 | 385 | 2.70e-13 | 72.4 |
| MS.gene020162.t1 | MTR_2g081520 | 23.472 | 409 | 261 | 15 | 6 | 396 | 4 | 378 | 2.73e-13 | 72.4 |
| MS.gene020162.t1 | MTR_2g081500 | 26.810 | 373 | 221 | 16 | 44 | 396 | 41 | 381 | 2.79e-13 | 72.4 |
| MS.gene020162.t1 | MTR_2g081520 | 23.971 | 413 | 256 | 17 | 6 | 397 | 4 | 379 | 2.86e-13 | 72.4 |
| MS.gene020162.t1 | MTR_2g081520 | 24.029 | 412 | 255 | 17 | 6 | 396 | 4 | 378 | 3.04e-13 | 72.0 |
| MS.gene020162.t1 | MTR_2g081520 | 23.415 | 410 | 262 | 15 | 6 | 397 | 4 | 379 | 3.05e-13 | 72.4 |
| MS.gene020162.t1 | MTR_0090s0020 | 25.132 | 378 | 248 | 15 | 32 | 396 | 25 | 380 | 3.13e-13 | 72.4 |
| MS.gene020162.t1 | MTR_4g091690 | 27.070 | 314 | 185 | 14 | 44 | 335 | 61 | 352 | 3.20e-13 | 72.4 |
| MS.gene020162.t1 | MTR_7g056663 | 23.160 | 462 | 286 | 21 | 3 | 434 | 10 | 432 | 3.29e-13 | 72.4 |
| MS.gene020162.t1 | MTR_2g081520 | 23.472 | 409 | 261 | 15 | 6 | 396 | 4 | 378 | 3.33e-13 | 72.0 |
| MS.gene020162.t1 | MTR_4g081730 | 23.210 | 405 | 265 | 15 | 12 | 395 | 6 | 385 | 3.84e-13 | 72.0 |
| MS.gene020162.t1 | MTR_2g011180 | 25.193 | 389 | 222 | 19 | 40 | 396 | 38 | 389 | 3.91e-13 | 72.0 |
| MS.gene020162.t1 | MTR_2g011180 | 25.193 | 389 | 222 | 19 | 40 | 396 | 38 | 389 | 4.21e-13 | 72.0 |
| MS.gene020162.t1 | MTR_2g081520 | 23.472 | 409 | 261 | 15 | 6 | 396 | 4 | 378 | 4.21e-13 | 72.0 |
| MS.gene020162.t1 | MTR_3g020280 | 23.810 | 378 | 229 | 15 | 44 | 395 | 41 | 385 | 8.60e-13 | 70.9 |
| MS.gene020162.t1 | MTR_8g013610 | 29.744 | 195 | 113 | 9 | 3 | 185 | 11 | 193 | 9.29e-13 | 70.9 |
| MS.gene020162.t1 | MTR_3g019490 | 22.406 | 424 | 249 | 16 | 5 | 397 | 7 | 381 | 9.79e-13 | 70.9 |
| MS.gene020162.t1 | MTR_4g081655 | 24.804 | 383 | 226 | 18 | 44 | 396 | 74 | 424 | 2.41e-12 | 69.7 |
| MS.gene020162.t1 | MTR_4g081655 | 24.219 | 384 | 229 | 18 | 44 | 397 | 74 | 425 | 2.84e-12 | 69.3 |
| MS.gene020162.t1 | MTR_4g081655 | 24.219 | 384 | 229 | 18 | 44 | 397 | 39 | 390 | 3.09e-12 | 69.3 |
| MS.gene020162.t1 | MTR_8g465980 | 24.679 | 389 | 243 | 16 | 26 | 396 | 21 | 377 | 3.66e-12 | 68.9 |
| MS.gene020162.t1 | MTR_4g091840 | 25.773 | 388 | 218 | 19 | 44 | 397 | 56 | 407 | 4.34e-12 | 68.9 |
| MS.gene020162.t1 | MTR_8g013560 | 31.361 | 169 | 101 | 7 | 29 | 185 | 27 | 192 | 4.52e-12 | 68.6 |
| MS.gene020162.t1 | MTR_7g058860 | 23.775 | 408 | 267 | 18 | 44 | 435 | 42 | 421 | 4.67e-12 | 68.6 |
| MS.gene020162.t1 | MTR_3g007590 | 27.273 | 374 | 214 | 19 | 4 | 348 | 3 | 347 | 5.13e-12 | 67.8 |
| MS.gene020162.t1 | MTR_2g103810 | 32.237 | 152 | 96 | 3 | 43 | 194 | 51 | 195 | 5.84e-12 | 68.2 |
| MS.gene020162.t1 | MTR_2g080090 | 23.810 | 420 | 242 | 19 | 8 | 401 | 16 | 383 | 6.36e-12 | 68.2 |
| MS.gene020162.t1 | MTR_2g080100 | 24.096 | 415 | 239 | 19 | 12 | 401 | 21 | 384 | 8.83e-12 | 67.8 |
| MS.gene020162.t1 | MTR_3g072800 | 28.387 | 310 | 183 | 15 | 10 | 307 | 11 | 293 | 1.25e-11 | 67.4 |
| MS.gene020162.t1 | MTR_3g007630 | 26.702 | 382 | 223 | 21 | 44 | 395 | 41 | 395 | 1.48e-11 | 67.0 |
| MS.gene020162.t1 | MTR_3g019530 | 23.684 | 380 | 225 | 14 | 44 | 397 | 44 | 384 | 1.67e-11 | 66.6 |
| MS.gene020162.t1 | MTR_3g019530 | 23.936 | 376 | 229 | 14 | 44 | 397 | 44 | 384 | 1.74e-11 | 66.6 |
| MS.gene020162.t1 | MTR_3g019530 | 23.684 | 380 | 225 | 14 | 44 | 397 | 44 | 384 | 1.82e-11 | 66.6 |
| MS.gene020162.t1 | MTR_3g019530 | 23.684 | 380 | 225 | 14 | 44 | 397 | 44 | 384 | 2.28e-11 | 66.6 |
| MS.gene020162.t1 | MTR_3g019530 | 23.684 | 380 | 225 | 14 | 44 | 397 | 44 | 384 | 2.28e-11 | 66.6 |
| MS.gene020162.t1 | MTR_4g081640 | 24.235 | 425 | 253 | 17 | 3 | 396 | 6 | 392 | 2.95e-11 | 66.2 |
| MS.gene020162.t1 | MTR_2g076590 | 25.507 | 345 | 217 | 15 | 79 | 407 | 93 | 413 | 4.46e-11 | 65.1 |
| MS.gene020162.t1 | MTR_7g056667 | 23.246 | 456 | 273 | 18 | 8 | 429 | 12 | 424 | 4.70e-11 | 65.5 |
| MS.gene020162.t1 | MTR_7g056450 | 23.235 | 439 | 260 | 21 | 3 | 411 | 20 | 411 | 6.04e-11 | 65.1 |
| MS.gene020162.t1 | MTR_4g091860 | 40.000 | 135 | 62 | 6 | 46 | 165 | 39 | 169 | 7.49e-11 | 64.7 |
| MS.gene020162.t1 | MTR_7g056450 | 23.235 | 439 | 260 | 21 | 3 | 411 | 10 | 401 | 7.93e-11 | 64.7 |
| MS.gene020162.t1 | MTR_2g076490 | 36.585 | 123 | 75 | 2 | 79 | 198 | 93 | 215 | 9.36e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020162.t1 | AT5G60900 | 43.609 | 266 | 129 | 10 | 9 | 257 | 11 | 272 | 6.29e-55 | 186 |
| MS.gene020162.t1 | AT5G24080 | 26.998 | 463 | 281 | 21 | 2 | 432 | 10 | 447 | 4.62e-30 | 124 |
| MS.gene020162.t1 | AT2G41890 | 26.500 | 400 | 252 | 14 | 10 | 400 | 14 | 380 | 2.59e-19 | 91.3 |
| MS.gene020162.t1 | AT3G12000 | 26.178 | 382 | 239 | 13 | 35 | 396 | 40 | 398 | 9.64e-18 | 85.5 |
| MS.gene020162.t1 | AT1G65790 | 24.561 | 399 | 244 | 13 | 20 | 397 | 22 | 384 | 1.38e-17 | 85.9 |
| MS.gene020162.t1 | AT1G65790 | 24.561 | 399 | 244 | 13 | 20 | 397 | 22 | 384 | 1.38e-17 | 85.9 |
| MS.gene020162.t1 | AT4G21390 | 25.231 | 432 | 264 | 16 | 6 | 411 | 11 | 409 | 1.45e-17 | 85.9 |
| MS.gene020162.t1 | AT4G21390 | 25.231 | 432 | 264 | 16 | 6 | 411 | 11 | 409 | 1.67e-17 | 85.9 |
| MS.gene020162.t1 | AT1G34300 | 24.619 | 394 | 247 | 17 | 26 | 410 | 25 | 377 | 1.85e-17 | 85.5 |
| MS.gene020162.t1 | AT1G65790 | 24.812 | 399 | 243 | 13 | 20 | 397 | 22 | 384 | 1.97e-17 | 85.5 |
| MS.gene020162.t1 | AT1G11330 | 25.897 | 390 | 246 | 15 | 39 | 406 | 42 | 410 | 7.87e-17 | 83.6 |
| MS.gene020162.t1 | AT1G11340 | 27.154 | 383 | 211 | 18 | 44 | 395 | 34 | 379 | 7.94e-17 | 83.6 |
| MS.gene020162.t1 | AT1G11330 | 25.897 | 390 | 246 | 15 | 39 | 406 | 42 | 410 | 8.34e-17 | 83.6 |
| MS.gene020162.t1 | AT1G11330 | 25.897 | 390 | 246 | 15 | 39 | 406 | 42 | 410 | 8.73e-17 | 83.6 |
| MS.gene020162.t1 | AT1G11340 | 27.154 | 383 | 211 | 18 | 44 | 395 | 102 | 447 | 9.58e-17 | 83.2 |
| MS.gene020162.t1 | AT1G11340 | 27.154 | 383 | 211 | 18 | 44 | 395 | 102 | 447 | 1.02e-16 | 83.2 |
| MS.gene020162.t1 | AT1G11410 | 24.865 | 370 | 236 | 16 | 44 | 395 | 13 | 358 | 2.44e-15 | 79.0 |
| MS.gene020162.t1 | AT1G11410 | 24.865 | 370 | 236 | 16 | 44 | 395 | 37 | 382 | 2.92e-15 | 79.0 |
| MS.gene020162.t1 | AT1G11410 | 24.865 | 370 | 236 | 16 | 44 | 395 | 44 | 389 | 3.04e-15 | 79.0 |
| MS.gene020162.t1 | AT1G11280 | 23.451 | 452 | 251 | 19 | 1 | 411 | 8 | 405 | 1.80e-14 | 76.3 |
| MS.gene020162.t1 | AT1G11280 | 23.451 | 452 | 251 | 19 | 1 | 411 | 8 | 405 | 1.83e-14 | 76.3 |
| MS.gene020162.t1 | AT1G11280 | 23.451 | 452 | 251 | 19 | 1 | 411 | 8 | 405 | 1.88e-14 | 76.3 |
| MS.gene020162.t1 | AT1G11280 | 23.451 | 452 | 251 | 19 | 1 | 411 | 18 | 415 | 2.12e-14 | 76.3 |
| MS.gene020162.t1 | AT1G11280 | 23.947 | 451 | 250 | 20 | 1 | 411 | 18 | 415 | 2.13e-14 | 76.3 |
| MS.gene020162.t1 | AT1G11300 | 24.311 | 399 | 246 | 16 | 34 | 406 | 32 | 400 | 2.37e-14 | 75.9 |
| MS.gene020162.t1 | AT4G21380 | 22.475 | 396 | 260 | 14 | 20 | 397 | 24 | 390 | 2.57e-14 | 75.5 |
| MS.gene020162.t1 | AT1G11300 | 24.181 | 397 | 249 | 16 | 34 | 406 | 32 | 400 | 2.93e-14 | 75.5 |
| MS.gene020162.t1 | AT1G78860 | 23.280 | 378 | 247 | 15 | 54 | 407 | 52 | 410 | 4.87e-14 | 74.3 |
| MS.gene020162.t1 | AT4G21380 | 22.475 | 396 | 260 | 14 | 20 | 397 | 24 | 390 | 5.15e-14 | 75.1 |
| MS.gene020162.t1 | AT1G78850 | 23.607 | 377 | 247 | 15 | 54 | 407 | 52 | 410 | 6.73e-14 | 73.9 |
| MS.gene020162.t1 | AT1G61360 | 23.487 | 413 | 248 | 18 | 34 | 411 | 19 | 398 | 9.56e-14 | 73.9 |
| MS.gene020162.t1 | AT1G65800 | 24.935 | 385 | 228 | 17 | 39 | 397 | 39 | 388 | 2.15e-13 | 72.8 |
| MS.gene020162.t1 | AT1G65800 | 24.935 | 385 | 228 | 17 | 39 | 397 | 39 | 388 | 2.23e-13 | 72.8 |
| MS.gene020162.t1 | AT1G11303 | 23.671 | 414 | 242 | 15 | 34 | 411 | 32 | 407 | 3.78e-13 | 72.0 |
| MS.gene020162.t1 | AT1G16905 | 26.462 | 359 | 222 | 18 | 62 | 407 | 69 | 398 | 1.88e-12 | 69.3 |
| MS.gene020162.t1 | AT1G61400 | 24.000 | 425 | 261 | 16 | 9 | 411 | 22 | 406 | 2.43e-12 | 69.7 |
| MS.gene020162.t1 | AT1G61380 | 23.077 | 429 | 265 | 19 | 10 | 411 | 9 | 399 | 2.44e-12 | 69.7 |
| MS.gene020162.t1 | AT1G61400 | 24.000 | 425 | 261 | 16 | 9 | 411 | 22 | 406 | 2.86e-12 | 69.3 |
| MS.gene020162.t1 | AT1G11350 | 26.253 | 419 | 218 | 21 | 33 | 406 | 26 | 398 | 6.28e-12 | 68.2 |
| MS.gene020162.t1 | AT1G61610 | 24.009 | 429 | 280 | 17 | 6 | 411 | 8 | 413 | 9.79e-12 | 67.8 |
| MS.gene020162.t1 | AT1G61610 | 24.009 | 429 | 280 | 17 | 6 | 411 | 8 | 413 | 1.07e-11 | 67.4 |
| MS.gene020162.t1 | AT4G32300 | 26.689 | 296 | 174 | 14 | 43 | 321 | 47 | 316 | 1.11e-11 | 67.4 |
| MS.gene020162.t1 | AT1G61550 | 22.384 | 411 | 265 | 14 | 26 | 411 | 10 | 391 | 1.82e-11 | 67.0 |
| MS.gene020162.t1 | AT1G61390 | 28.646 | 192 | 117 | 6 | 1 | 182 | 22 | 203 | 1.96e-11 | 66.6 |
| MS.gene020162.t1 | AT4G27290 | 23.741 | 417 | 252 | 15 | 9 | 396 | 6 | 385 | 2.16e-11 | 66.6 |
| MS.gene020162.t1 | AT5G24080 | 24.629 | 337 | 206 | 17 | 127 | 432 | 1 | 320 | 2.17e-11 | 66.6 |
| MS.gene020162.t1 | AT5G24080 | 24.629 | 337 | 206 | 17 | 127 | 432 | 1 | 320 | 2.17e-11 | 66.6 |
| MS.gene020162.t1 | AT4G27290 | 23.684 | 418 | 253 | 15 | 9 | 397 | 6 | 386 | 2.26e-11 | 66.6 |
Find 89 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGGTTGCTTTCACCTTC+TGG | 0.162410 | 8.3:+77996970 | MS.gene020162:CDS |
| GTCAGGGTACTTGTATGTTT+TGG | 0.212495 | 8.3:+77997527 | MS.gene020162:CDS |
| CTACACTGCTCTTCAGTAAA+AGG | 0.260924 | 8.3:-77997981 | None:intergenic |
| ACCAATGGCTATGGTACTTT+TGG | 0.266017 | 8.3:-77996917 | None:intergenic |
| AGTATAAGTACATATATTAA+AGG | 0.280779 | 8.3:-77997712 | None:intergenic |
| CCTTCTGGTGACTTTGCCTT+TGG | 0.284286 | 8.3:+77996985 | MS.gene020162:CDS |
| TCAATCAGTGAGTAATGTTT+TGG | 0.296727 | 8.3:-77997813 | None:intergenic |
| CCTTCTCAAGTTGTGGATAA+AGG | 0.297314 | 8.3:+77997312 | MS.gene020162:CDS |
| CACTGGCAACTTTGTGCTTC+AGG | 0.298549 | 8.3:+77997233 | MS.gene020162:CDS |
| TCACTCTTAGTTGAACTCTT+AGG | 0.318025 | 8.3:-77997663 | None:intergenic |
| TCCATAACCTGACACCATTT+GGG | 0.321032 | 8.3:-77997164 | None:intergenic |
| AAAGCTTTCTTCAAGGCTTA+AGG | 0.324891 | 8.3:+77997338 | MS.gene020162:CDS |
| CCCCAAATGGTGTCAGGTTA+TGG | 0.333819 | 8.3:+77997163 | MS.gene020162:CDS |
| TTCCATAACCTGACACCATT+TGG | 0.334304 | 8.3:-77997165 | None:intergenic |
| TATAATAGCTTCTGCACTTT+GGG | 0.334674 | 8.3:+77997762 | MS.gene020162:CDS |
| CAGCTGCCATATGGATCATT+AGG | 0.345935 | 8.3:-77997837 | None:intergenic |
| GCACATCCTTGTATGAAATC+TGG | 0.361226 | 8.3:-77997864 | None:intergenic |
| TGACAGGTATGGTGGAACTA+TGG | 0.376095 | 8.3:-77998157 | None:intergenic |
| CACAACTTGAGAAGGCAATA+AGG | 0.378374 | 8.3:-77997304 | None:intergenic |
| AAGAAGTTACCACTTTCAAA+TGG | 0.384175 | 8.3:+77998071 | MS.gene020162:CDS |
| CATTCTATTAATTTACCATC+TGG | 0.385953 | 8.3:+77997423 | MS.gene020162:CDS |
| AAGGAAGAAAGCTTTCTTCA+AGG | 0.414940 | 8.3:+77997331 | MS.gene020162:CDS |
| ATCAAGTGCTGGAGCTCAAT+TGG | 0.420184 | 8.3:+77997494 | MS.gene020162:CDS |
| AGAGTTGATGCAACTCTTAA+TGG | 0.425621 | 8.3:+77998095 | MS.gene020162:CDS |
| AGCTCCAGCACTTGATGTAC+TGG | 0.427066 | 8.3:-77997487 | None:intergenic |
| TCAGGTTAGGTGATAGTTGT+TGG | 0.437474 | 8.3:+77998045 | MS.gene020162:CDS |
| TCTGGCTTGCAGCTGCCATA+TGG | 0.441887 | 8.3:-77997846 | None:intergenic |
| CAATTGGTCTTTGACAAGTC+AGG | 0.449002 | 8.3:+77997510 | MS.gene020162:CDS |
| GTGGAACTCACTGCCAATGA+TGG | 0.454151 | 8.3:+77997126 | MS.gene020162:CDS |
| CTTATTGCCTTCTCAAGTTG+TGG | 0.458043 | 8.3:+77997305 | MS.gene020162:CDS |
| ACTGTTGTGTGGTATGCTAA+TGG | 0.458658 | 8.3:+77997075 | MS.gene020162:CDS |
| ATCAGTAAGTAGAGGAGAAA+GGG | 0.464310 | 8.3:-77996865 | None:intergenic |
| GTGAAGGTTGGACCACAGTA+TGG | 0.468347 | 8.3:+77997682 | MS.gene020162:CDS |
| ATTGATCCTAATGATCCATA+TGG | 0.477623 | 8.3:+77997831 | MS.gene020162:CDS |
| ATTTAATACTAATTTGTGAC+AGG | 0.481714 | 8.3:-77998173 | None:intergenic |
| AAGGAGACAGATTTCAGTAA+AGG | 0.482797 | 8.3:+77997357 | MS.gene020162:CDS |
| ATATAATAGCTTCTGCACTT+TGG | 0.487312 | 8.3:+77997761 | MS.gene020162:CDS |
| GTATAAGTACATATATTAAA+GGG | 0.488197 | 8.3:-77997711 | None:intergenic |
| CCTTTATCCACAACTTGAGA+AGG | 0.492964 | 8.3:-77997312 | None:intergenic |
| AGAAGTTACCACTTTCAAAT+GGG | 0.494879 | 8.3:+77998072 | MS.gene020162:CDS |
| AGTTAGCACCAACCCATCAT+TGG | 0.498106 | 8.3:-77997139 | None:intergenic |
| GCAGTGTAGGAAATCTTGTA+TGG | 0.504417 | 8.3:+77997995 | MS.gene020162:CDS |
| AATCAGTAAGTAGAGGAGAA+AGG | 0.506322 | 8.3:-77996866 | None:intergenic |
| ATACTAATTTGTGACAGGTA+TGG | 0.507981 | 8.3:-77998168 | None:intergenic |
| GGATGATTGTTTGTGTTCTG+TGG | 0.510059 | 8.3:+77998016 | MS.gene020162:CDS |
| AAAAGAATCACCAATGGCTA+TGG | 0.516781 | 8.3:-77996926 | None:intergenic |
| AGTGCAGGTAGTGGTGTTTG+TGG | 0.518931 | 8.3:+77997738 | MS.gene020162:CDS |
| TAACTTCCCCAAATGGTGTC+AGG | 0.521731 | 8.3:+77997157 | MS.gene020162:CDS |
| TATCAGATTATGTGCTTCAA+AGG | 0.523234 | 8.3:+77997958 | MS.gene020162:CDS |
| TGCAACTCTTAATGGTGCTA+AGG | 0.523300 | 8.3:+77998103 | MS.gene020162:CDS |
| TTGGTGCTAACTTCCCCAAA+TGG | 0.527112 | 8.3:+77997150 | MS.gene020162:CDS |
| TGAAGCACATAATCTGATAG+AGG | 0.536988 | 8.3:-77997954 | None:intergenic |
| GGTTTGAGCTACAGCACAGA+TGG | 0.537672 | 8.3:-77996896 | None:intergenic |
| AGACAGATTTCAGTAAAGGA+AGG | 0.543432 | 8.3:+77997361 | MS.gene020162:CDS |
| AAATCCAGTACATCAAGTGC+TGG | 0.547246 | 8.3:+77997483 | MS.gene020162:CDS |
| GGAGACAGTCCTGCACCAAA+AGG | 0.549672 | 8.3:+77997096 | MS.gene020162:CDS |
| TGCAAGCCAGATTTCATACA+AGG | 0.550125 | 8.3:+77997858 | MS.gene020162:CDS |
| GACAGGTATGGTGGAACTAT+GGG | 0.550857 | 8.3:-77998156 | None:intergenic |
| TCAACTCTCCCATTTGAAAG+TGG | 0.563194 | 8.3:-77998080 | None:intergenic |
| TGCACCAAAAGGATCAAAAG+TGG | 0.563251 | 8.3:+77997107 | MS.gene020162:CDS |
| ACCAAAAGTACCATAGCCAT+TGG | 0.565235 | 8.3:+77996916 | MS.gene020162:CDS |
| TATACTGTTAGTGCAGGTAG+TGG | 0.565930 | 8.3:+77997729 | MS.gene020162:CDS |
| AAAAGATTAGTGTCTTTGAG+TGG | 0.569176 | 8.3:-77997015 | None:intergenic |
| AAGCAACCATGGAGATGTGC+TGG | 0.569700 | 8.3:-77996959 | None:intergenic |
| ATGGTAAATTCAACAGTCTG+TGG | 0.569947 | 8.3:+77997256 | MS.gene020162:CDS |
| AATTGGTCTTTGACAAGTCA+GGG | 0.572130 | 8.3:+77997511 | MS.gene020162:CDS |
| GGCAACTTTGTGCTTCAGGA+TGG | 0.577553 | 8.3:+77997237 | MS.gene020162:CDS |
| TGTACTTATACTGTTAGTGC+AGG | 0.578443 | 8.3:+77997723 | MS.gene020162:CDS |
| CGCGGTGTATTGAATGACAC+TGG | 0.581627 | 8.3:+77997216 | MS.gene020162:CDS |
| CTAATTTGTGACAGGTATGG+TGG | 0.587677 | 8.3:-77998165 | None:intergenic |
| TGGTAAATTCAACAGTCTGT+GGG | 0.591832 | 8.3:+77997257 | MS.gene020162:CDS |
| CACAAGCCAGCACATCTCCA+TGG | 0.597254 | 8.3:+77996953 | MS.gene020162:CDS |
| CCAGAAGGTGAAAGCAACCA+TGG | 0.600409 | 8.3:-77996970 | None:intergenic |
| GAAGGCAATAAGGTGTCACT+AGG | 0.602021 | 8.3:-77997294 | None:intergenic |
| ACTCACTGCCAATGATGGGT+TGG | 0.610259 | 8.3:+77997131 | MS.gene020162:CDS |
| AAGAGTTCAACTAAGAGTGA+AGG | 0.613595 | 8.3:+77997666 | MS.gene020162:CDS |
| GTTCAACTAAGAGTGAAGGT+TGG | 0.619862 | 8.3:+77997670 | MS.gene020162:CDS |
| CTCAATGTTAAAGTTTCTCG+CGG | 0.620103 | 8.3:+77997198 | MS.gene020162:CDS |
| TTTCCGAGAAAACTGTTGTG+TGG | 0.627609 | 8.3:+77997064 | MS.gene020162:CDS |
| TGCAGTAAAAGAATCACCAA+TGG | 0.629150 | 8.3:-77996932 | None:intergenic |
| TGGAACTCACTGCCAATGAT+GGG | 0.629211 | 8.3:+77997127 | MS.gene020162:CDS |
| GTCAGGTTATGGAATACTGA+AGG | 0.629411 | 8.3:+77997174 | MS.gene020162:CDS |
| CCAAAGGCAAAGTCACCAGA+AGG | 0.636933 | 8.3:-77996985 | None:intergenic |
| CCATAACCTGACACCATTTG+GGG | 0.639256 | 8.3:-77997163 | None:intergenic |
| ATTGCAGAATCAGTAAGTAG+AGG | 0.646335 | 8.3:-77996873 | None:intergenic |
| TTTGAGTGGAAGAAAACCAA+AGG | 0.654690 | 8.3:-77997001 | None:intergenic |
| AGGTATGGTGGAACTATGGG+AGG | 0.656973 | 8.3:-77998153 | None:intergenic |
| TGCTCTAAGATAAAATTGTG+TGG | 0.657315 | 8.3:-77997601 | None:intergenic |
| AAAGGGCTTAGACCATACTG+TGG | 0.757626 | 8.3:-77997694 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTATAAGTACATATATTAA+AGG | - | chr8.3:77997715-77997734 | None:intergenic | 15.0% |
| !! | GTATAAGTACATATATTAAA+GGG | - | chr8.3:77997714-77997733 | None:intergenic | 15.0% |
| !!! | ATATCATTTCTCTTTTTACT+TGG | - | chr8.3:77997900-77997919 | None:intergenic | 20.0% |
| !!! | ATCTTTTTTTGCTTTCAATT+TGG | + | chr8.3:77997031-77997050 | MS.gene020162:CDS | 20.0% |
| ! | CATTCTATTAATTTACCATC+TGG | + | chr8.3:77997423-77997442 | MS.gene020162:CDS | 25.0% |
| !! | TTTTCATTAACATAACCAGA+TGG | - | chr8.3:77997441-77997460 | None:intergenic | 25.0% |
| AAAAGATTAGTGTCTTTGAG+TGG | - | chr8.3:77997018-77997037 | None:intergenic | 30.0% | |
| AAGAAGTTACCACTTTCAAA+TGG | + | chr8.3:77998071-77998090 | MS.gene020162:CDS | 30.0% | |
| AGAAGTTACCACTTTCAAAT+GGG | + | chr8.3:77998072-77998091 | MS.gene020162:CDS | 30.0% | |
| ATATAATAGCTTCTGCACTT+TGG | + | chr8.3:77997761-77997780 | MS.gene020162:CDS | 30.0% | |
| ATTGATCCTAATGATCCATA+TGG | + | chr8.3:77997831-77997850 | MS.gene020162:CDS | 30.0% | |
| TATAATAGCTTCTGCACTTT+GGG | + | chr8.3:77997762-77997781 | MS.gene020162:CDS | 30.0% | |
| TATCAGATTATGTGCTTCAA+AGG | + | chr8.3:77997958-77997977 | MS.gene020162:CDS | 30.0% | |
| ! | AACAGTTTTCTCGGAAATTT+TGG | - | chr8.3:77997061-77997080 | None:intergenic | 30.0% |
| ! | ACAGTTTTCTCGGAAATTTT+GGG | - | chr8.3:77997060-77997079 | None:intergenic | 30.0% |
| ! | AGAGCAACTCTTAATTTTGA+TGG | + | chr8.3:77997618-77997637 | MS.gene020162:CDS | 30.0% |
| ! | TCAATCAGTGAGTAATGTTT+TGG | - | chr8.3:77997816-77997835 | None:intergenic | 30.0% |
| !! | TGCTCTAAGATAAAATTGTG+TGG | - | chr8.3:77997604-77997623 | None:intergenic | 30.0% |
| AAAAGAATCACCAATGGCTA+TGG | - | chr8.3:77996929-77996948 | None:intergenic | 35.0% | |
| AAAGCTTTCTTCAAGGCTTA+AGG | + | chr8.3:77997338-77997357 | MS.gene020162:CDS | 35.0% | |
| AAGAGTTCAACTAAGAGTGA+AGG | + | chr8.3:77997666-77997685 | MS.gene020162:CDS | 35.0% | |
| AAGGAAGAAAGCTTTCTTCA+AGG | + | chr8.3:77997331-77997350 | MS.gene020162:CDS | 35.0% | |
| AAGGAGACAGATTTCAGTAA+AGG | + | chr8.3:77997357-77997376 | MS.gene020162:CDS | 35.0% | |
| AATCAGTAAGTAGAGGAGAA+AGG | - | chr8.3:77996869-77996888 | None:intergenic | 35.0% | |
| AGACAGATTTCAGTAAAGGA+AGG | + | chr8.3:77997361-77997380 | MS.gene020162:CDS | 35.0% | |
| ATCAGTAAGTAGAGGAGAAA+GGG | - | chr8.3:77996868-77996887 | None:intergenic | 35.0% | |
| ATGGTAAATTCAACAGTCTG+TGG | + | chr8.3:77997256-77997275 | MS.gene020162:CDS | 35.0% | |
| ATTGCAGAATCAGTAAGTAG+AGG | - | chr8.3:77996876-77996895 | None:intergenic | 35.0% | |
| CTCAATGTTAAAGTTTCTCG+CGG | + | chr8.3:77997198-77997217 | MS.gene020162:CDS | 35.0% | |
| TCACTCTTAGTTGAACTCTT+AGG | - | chr8.3:77997666-77997685 | None:intergenic | 35.0% | |
| TGAAGCACATAATCTGATAG+AGG | - | chr8.3:77997957-77997976 | None:intergenic | 35.0% | |
| TGCAGTAAAAGAATCACCAA+TGG | - | chr8.3:77996935-77996954 | None:intergenic | 35.0% | |
| TGGTAAATTCAACAGTCTGT+GGG | + | chr8.3:77997257-77997276 | MS.gene020162:CDS | 35.0% | |
| TGTACTTATACTGTTAGTGC+AGG | + | chr8.3:77997723-77997742 | MS.gene020162:CDS | 35.0% | |
| TTTGAGTGGAAGAAAACCAA+AGG | - | chr8.3:77997004-77997023 | None:intergenic | 35.0% | |
| ! | ATACCACACAACAGTTTTCT+CGG | - | chr8.3:77997070-77997089 | None:intergenic | 35.0% |
| ! | GAACTCGTTTTACAAAGTGA+TGG | + | chr8.3:77997387-77997406 | MS.gene020162:CDS | 35.0% |
| !! | AATTGGTCTTTGACAAGTCA+GGG | + | chr8.3:77997511-77997530 | MS.gene020162:CDS | 35.0% |
| !! | AGAGTTGATGCAACTCTTAA+TGG | + | chr8.3:77998095-77998114 | MS.gene020162:CDS | 35.0% |
| !! | AGATTTTGATCGACACTGAT+TGG | + | chr8.3:77997931-77997950 | MS.gene020162:CDS | 35.0% |
| !! | AGTTCCACTTTTGATCCTTT+TGG | - | chr8.3:77997114-77997133 | None:intergenic | 35.0% |
| !! | TCAGGGTACTTGTATGTTTT+GGG | + | chr8.3:77997528-77997547 | MS.gene020162:CDS | 35.0% |
| !! | TGTTTTGGACACTGACATTT+TGG | - | chr8.3:77997801-77997820 | None:intergenic | 35.0% |
| AAATCCAGTACATCAAGTGC+TGG | + | chr8.3:77997483-77997502 | MS.gene020162:CDS | 40.0% | |
| ACTGTTGTGTGGTATGCTAA+TGG | + | chr8.3:77997075-77997094 | MS.gene020162:CDS | 40.0% | |
| CACAACTTGAGAAGGCAATA+AGG | - | chr8.3:77997307-77997326 | None:intergenic | 40.0% | |
| CCTTTATCCACAACTTGAGA+AGG | - | chr8.3:77997315-77997334 | None:intergenic | 40.0% | |
| CTACACTGCTCTTCAGTAAA+AGG | - | chr8.3:77997984-77998003 | None:intergenic | 40.0% | |
| GCACATCCTTGTATGAAATC+TGG | - | chr8.3:77997867-77997886 | None:intergenic | 40.0% | |
| GCAGTGTAGGAAATCTTGTA+TGG | + | chr8.3:77997995-77998014 | MS.gene020162:CDS | 40.0% | |
| GGATGATTGTTTGTGTTCTG+TGG | + | chr8.3:77998016-77998035 | MS.gene020162:CDS | 40.0% | |
| GTCAGGTTATGGAATACTGA+AGG | + | chr8.3:77997174-77997193 | MS.gene020162:CDS | 40.0% | |
| GTTCAACTAAGAGTGAAGGT+TGG | + | chr8.3:77997670-77997689 | MS.gene020162:CDS | 40.0% | |
| TATACTGTTAGTGCAGGTAG+TGG | + | chr8.3:77997729-77997748 | MS.gene020162:CDS | 40.0% | |
| TCAACTCTCCCATTTGAAAG+TGG | - | chr8.3:77998083-77998102 | None:intergenic | 40.0% | |
| TCAGGTTAGGTGATAGTTGT+TGG | + | chr8.3:77998045-77998064 | MS.gene020162:CDS | 40.0% | |
| TCCATAACCTGACACCATTT+GGG | - | chr8.3:77997167-77997186 | None:intergenic | 40.0% | |
| TGCAAGCCAGATTTCATACA+AGG | + | chr8.3:77997858-77997877 | MS.gene020162:CDS | 40.0% | |
| TGCACCAAAAGGATCAAAAG+TGG | + | chr8.3:77997107-77997126 | MS.gene020162:CDS | 40.0% | |
| TTCCATAACCTGACACCATT+TGG | - | chr8.3:77997168-77997187 | None:intergenic | 40.0% | |
| TTTCCGAGAAAACTGTTGTG+TGG | + | chr8.3:77997064-77997083 | MS.gene020162:CDS | 40.0% | |
| ! | ACCAATGGCTATGGTACTTT+TGG | - | chr8.3:77996920-77996939 | None:intergenic | 40.0% |
| ! | CCTTCTCAAGTTGTGGATAA+AGG | + | chr8.3:77997312-77997331 | MS.gene020162:CDS | 40.0% |
| ! | CTAATTTGTGACAGGTATGG+TGG | - | chr8.3:77998168-77998187 | None:intergenic | 40.0% |
| ! | CTTATTGCCTTCTCAAGTTG+TGG | + | chr8.3:77997305-77997324 | MS.gene020162:CDS | 40.0% |
| ! | CTTTTACTGAAGAGCAGTGT+AGG | + | chr8.3:77997982-77998001 | MS.gene020162:CDS | 40.0% |
| ! | TGCAACTCTTAATGGTGCTA+AGG | + | chr8.3:77998103-77998122 | MS.gene020162:CDS | 40.0% |
| !! | ACCAAAAGTACCATAGCCAT+TGG | + | chr8.3:77996916-77996935 | MS.gene020162:CDS | 40.0% |
| !! | ACTTTTGATCCTTTTGGTGC+AGG | - | chr8.3:77997108-77997127 | None:intergenic | 40.0% |
| !! | CAATTGGTCTTTGACAAGTC+AGG | + | chr8.3:77997510-77997529 | MS.gene020162:CDS | 40.0% |
| !! | GTCAGGGTACTTGTATGTTT+TGG | + | chr8.3:77997527-77997546 | MS.gene020162:CDS | 40.0% |
| !! | TGTGTTCTGTGGCTATTTTC+AGG | + | chr8.3:77998027-77998046 | MS.gene020162:CDS | 40.0% |
| !!! | TCTGTGGCTATTTTCAGGTT+AGG | + | chr8.3:77998032-77998051 | MS.gene020162:CDS | 40.0% |
| AAAGGGCTTAGACCATACTG+TGG | - | chr8.3:77997697-77997716 | None:intergenic | 45.0% | |
| AGTTAGCACCAACCCATCAT+TGG | - | chr8.3:77997142-77997161 | None:intergenic | 45.0% | |
| CAGCTGCCATATGGATCATT+AGG | - | chr8.3:77997840-77997859 | None:intergenic | 45.0% | |
| CCATAACCTGACACCATTTG+GGG | - | chr8.3:77997166-77997185 | None:intergenic | 45.0% | |
| TAACTTCCCCAAATGGTGTC+AGG | + | chr8.3:77997157-77997176 | MS.gene020162:CDS | 45.0% | |
| TGGAACTCACTGCCAATGAT+GGG | + | chr8.3:77997127-77997146 | MS.gene020162:CDS | 45.0% | |
| ! | GACAGGTATGGTGGAACTAT+GGG | - | chr8.3:77998159-77998178 | None:intergenic | 45.0% |
| ! | TGACAGGTATGGTGGAACTA+TGG | - | chr8.3:77998160-77998179 | None:intergenic | 45.0% |
| !! | ATCAAGTGCTGGAGCTCAAT+TGG | + | chr8.3:77997494-77997513 | MS.gene020162:CDS | 45.0% |
| !! | GAAGGCAATAAGGTGTCACT+AGG | - | chr8.3:77997297-77997316 | None:intergenic | 45.0% |
| !! | TTGGTGCTAACTTCCCCAAA+TGG | + | chr8.3:77997150-77997169 | MS.gene020162:CDS | 45.0% |
| AAGCAACCATGGAGATGTGC+TGG | - | chr8.3:77996962-77996981 | None:intergenic | 50.0% | |
| AGCTCCAGCACTTGATGTAC+TGG | - | chr8.3:77997490-77997509 | None:intergenic | 50.0% | |
| CACTGGCAACTTTGTGCTTC+AGG | + | chr8.3:77997233-77997252 | MS.gene020162:CDS | 50.0% | |
| CCAAAGGCAAAGTCACCAGA+AGG | - | chr8.3:77996988-77997007 | None:intergenic | 50.0% | |
| CCAGAAGGTGAAAGCAACCA+TGG | - | chr8.3:77996973-77996992 | None:intergenic | 50.0% | |
| CCTTCTGGTGACTTTGCCTT+TGG | + | chr8.3:77996985-77997004 | MS.gene020162:CDS | 50.0% | |
| CGCGGTGTATTGAATGACAC+TGG | + | chr8.3:77997216-77997235 | MS.gene020162:CDS | 50.0% | |
| GGCAACTTTGTGCTTCAGGA+TGG | + | chr8.3:77997237-77997256 | MS.gene020162:CDS | 50.0% | |
| GGTTTGAGCTACAGCACAGA+TGG | - | chr8.3:77996899-77996918 | None:intergenic | 50.0% | |
| GTGAAGGTTGGACCACAGTA+TGG | + | chr8.3:77997682-77997701 | MS.gene020162:CDS | 50.0% | |
| GTGGAACTCACTGCCAATGA+TGG | + | chr8.3:77997126-77997145 | MS.gene020162:CDS | 50.0% | |
| ! | AGGTATGGTGGAACTATGGG+AGG | - | chr8.3:77998156-77998175 | None:intergenic | 50.0% |
| ! | AGTGCAGGTAGTGGTGTTTG+TGG | + | chr8.3:77997738-77997757 | MS.gene020162:CDS | 50.0% |
| ! | CCATGGTTGCTTTCACCTTC+TGG | + | chr8.3:77996970-77996989 | MS.gene020162:CDS | 50.0% |
| ! | CCCCAAATGGTGTCAGGTTA+TGG | + | chr8.3:77997163-77997182 | MS.gene020162:CDS | 50.0% |
| !! | ACTCACTGCCAATGATGGGT+TGG | + | chr8.3:77997131-77997150 | MS.gene020162:CDS | 50.0% |
| CACAAGCCAGCACATCTCCA+TGG | + | chr8.3:77996953-77996972 | MS.gene020162:CDS | 55.0% | |
| GGAGACAGTCCTGCACCAAA+AGG | + | chr8.3:77997096-77997115 | MS.gene020162:CDS | 55.0% | |
| ! | TCTGGCTTGCAGCTGCCATA+TGG | - | chr8.3:77997849-77997868 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 77996847 | 77998187 | 77996847 | ID=MS.gene020162 |
| chr8.3 | mRNA | 77996847 | 77998187 | 77996847 | ID=MS.gene020162.t1;Parent=MS.gene020162 |
| chr8.3 | exon | 77996847 | 77998187 | 77996847 | ID=MS.gene020162.t1.exon1;Parent=MS.gene020162.t1 |
| chr8.3 | CDS | 77996847 | 77998187 | 77996847 | ID=cds.MS.gene020162.t1;Parent=MS.gene020162.t1 |
| Gene Sequence |
| Protein sequence |
