AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene020830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020830.t1 MTR_5g096390 98.977 684 7 0 1 684 1 684 0.0 1405
MS.gene020830.t1 MTR_1g054935 46.311 637 292 8 57 680 139 738 0.0 572
MS.gene020830.t1 MTR_1g054935 46.780 590 286 4 103 680 3 576 0.0 557
MS.gene020830.t1 MTR_7g106880 44.651 645 309 8 47 679 118 726 0.0 553
MS.gene020830.t1 MTR_1g054960 47.766 582 277 6 107 680 21 583 0.0 552
MS.gene020830.t1 MTR_7g106880 46.350 589 288 6 103 679 3 575 0.0 531
MS.gene020830.t1 MTR_2g079980 43.112 617 318 8 67 680 3 589 4.42e-174 510
MS.gene020830.t1 MTR_5g025470 43.930 626 309 7 64 680 44 636 2.80e-172 507
MS.gene020830.t1 MTR_8g059150 43.949 628 319 9 57 680 28 626 1.10e-168 498
MS.gene020830.t1 MTR_1g093990 42.628 624 332 8 64 680 56 660 9.68e-167 494
MS.gene020830.t1 MTR_1g096580 39.626 641 345 11 64 680 44 666 5.56e-154 461
MS.gene020830.t1 MTR_4g094060 34.552 547 314 19 104 627 68 593 5.77e-72 247
MS.gene020830.t1 MTR_4g094050 34.124 548 315 18 104 627 68 593 4.95e-70 242
MS.gene020830.t1 MTR_4g076970 31.516 587 339 16 72 616 1 566 7.86e-70 241
MS.gene020830.t1 MTR_1g108340 29.813 587 379 9 62 630 40 611 7.70e-69 239
MS.gene020830.t1 MTR_1g108340 29.813 587 379 9 62 630 40 611 8.55e-69 239
MS.gene020830.t1 MTR_8g093840 31.654 635 370 24 83 681 30 636 2.27e-67 233
MS.gene020830.t1 MTR_7g100120 26.790 754 449 22 11 678 5 741 2.51e-65 230
MS.gene020830.t1 MTR_4g076940 35.491 448 270 10 107 541 51 492 2.86e-65 229
MS.gene020830.t1 MTR_4g076940 35.491 448 270 10 107 541 91 532 4.06e-65 229
MS.gene020830.t1 MTR_4g116540 30.835 587 370 15 108 681 74 637 5.70e-65 227
MS.gene020830.t1 MTR_1g115790 30.500 600 369 18 63 626 72 659 9.13e-63 223
MS.gene020830.t1 MTR_4g094090 30.083 605 364 20 100 673 22 598 2.58e-62 219
MS.gene020830.t1 MTR_4g076900 39.275 331 187 6 107 426 27 354 4.16e-62 219
MS.gene020830.t1 MTR_6g066240 32.007 553 329 15 102 628 59 590 2.80e-61 218
MS.gene020830.t1 MTR_3g096410 30.846 603 367 21 107 681 56 636 1.09e-60 215
MS.gene020830.t1 MTR_2g078080 30.983 539 321 16 107 629 48 551 3.16e-60 213
MS.gene020830.t1 MTR_4g094010 30.619 565 355 16 94 638 35 582 3.31e-60 214
MS.gene020830.t1 MTR_3g463680 28.793 646 398 16 61 684 810 1415 2.74e-58 214
MS.gene020830.t1 MTR_3g463680 24.691 567 351 16 108 620 167 711 8.00e-31 130
MS.gene020830.t1 MTR_7g104100 27.603 605 379 16 56 637 836 1404 2.52e-57 211
MS.gene020830.t1 MTR_7g104100 25.654 573 329 22 109 616 182 722 6.79e-31 130
MS.gene020830.t1 MTR_1g094660 32.500 480 285 11 107 555 515 986 9.73e-57 209
MS.gene020830.t1 MTR_1g050525 27.965 565 360 13 61 611 861 1392 2.32e-55 205
MS.gene020830.t1 MTR_1g050525 24.460 556 357 17 109 616 176 716 1.78e-29 125
MS.gene020830.t1 MTR_1g099570 27.970 665 379 26 58 683 3 606 2.80e-55 199
MS.gene020830.t1 MTR_7g104150 27.110 616 386 16 36 611 789 1381 2.86e-55 205
MS.gene020830.t1 MTR_7g104150 24.174 575 335 20 109 616 184 724 4.83e-26 115
MS.gene020830.t1 MTR_1g094660 47.951 244 122 5 107 346 515 757 5.02e-55 203
MS.gene020830.t1 MTR_7g104110 27.000 600 377 15 50 611 797 1373 1.43e-54 203
MS.gene020830.t1 MTR_7g104110 23.227 564 354 14 109 616 178 718 1.65e-29 126
MS.gene020830.t1 MTR_4g054020 31.810 525 305 18 122 627 1 491 1.47e-53 194
MS.gene020830.t1 MTR_5g070320 28.598 542 331 13 109 624 858 1369 2.19e-53 199
MS.gene020830.t1 MTR_5g070320 25.557 583 346 20 108 629 168 723 3.08e-34 140
MS.gene020830.t1 MTR_5g070320 28.598 542 331 13 109 624 667 1178 2.88e-53 199
MS.gene020830.t1 MTR_5g070320 23.933 539 324 19 150 629 21 532 4.54e-23 105
MS.gene020830.t1 MTR_5g070320 28.598 542 331 13 109 624 571 1082 3.07e-53 199
MS.gene020830.t1 MTR_5g070320 23.983 467 304 16 196 637 4 444 7.18e-21 98.6
MS.gene020830.t1 MTR_7g098800 27.288 590 391 13 109 684 803 1368 1.54e-52 197
MS.gene020830.t1 MTR_7g098800 24.359 624 387 21 65 627 85 684 4.32e-31 130
MS.gene020830.t1 MTR_4g093845 29.422 554 341 16 100 627 50 579 3.26e-52 191
MS.gene020830.t1 MTR_7g104130 26.678 596 386 13 50 611 803 1381 6.63e-52 195
MS.gene020830.t1 MTR_7g104130 28.938 273 157 7 109 345 184 455 1.46e-25 113
MS.gene020830.t1 MTR_1g492950 27.290 513 339 10 109 606 894 1387 1.45e-51 194
MS.gene020830.t1 MTR_1g492950 31.752 274 148 7 109 345 189 460 8.47e-29 124
MS.gene020830.t1 MTR_1g011650 27.703 592 374 18 61 635 844 1398 1.81e-51 193
MS.gene020830.t1 MTR_1g011650 23.633 567 370 15 98 616 155 706 2.14e-27 119
MS.gene020830.t1 MTR_4g076940 34.197 386 238 8 167 541 19 399 5.38e-51 187
MS.gene020830.t1 MTR_2g101090 27.505 549 330 15 109 625 871 1383 5.50e-51 192
MS.gene020830.t1 MTR_2g101090 24.612 516 280 17 108 563 178 644 6.59e-25 111
MS.gene020830.t1 MTR_7g098760 27.091 550 366 12 109 643 880 1409 6.16e-51 192
MS.gene020830.t1 MTR_7g098760 30.986 284 159 8 98 345 151 433 4.60e-29 124
MS.gene020830.t1 MTR_8g014360 27.808 543 336 13 109 625 905 1417 1.07e-50 191
MS.gene020830.t1 MTR_8g014360 24.417 557 368 14 108 621 177 723 3.84e-34 140
MS.gene020830.t1 MTR_7g104130 26.724 580 376 12 50 597 803 1365 1.61e-50 191
MS.gene020830.t1 MTR_7g104130 28.938 273 157 7 109 345 184 455 1.61e-25 113
MS.gene020830.t1 MTR_8g107450 42.449 245 137 4 104 345 64 307 3.99e-50 187
MS.gene020830.t1 MTR_5g030910 45.082 244 129 5 103 343 45 286 4.77e-50 186
MS.gene020830.t1 MTR_4g123850 26.904 591 365 17 61 628 826 1372 2.78e-49 187
MS.gene020830.t1 MTR_4g123850 23.732 552 365 14 109 616 168 707 9.57e-31 130
MS.gene020830.t1 MTR_7g098780 26.580 538 354 14 109 628 845 1359 3.73e-49 186
MS.gene020830.t1 MTR_7g098780 28.882 322 192 6 61 345 125 446 1.83e-30 129
MS.gene020830.t1 MTR_7g098750 26.460 548 372 12 109 643 613 1142 8.77e-49 185
MS.gene020830.t1 MTR_7g098750 22.426 437 302 14 211 629 28 445 9.43e-16 82.0
MS.gene020830.t1 MTR_7g098750 26.460 548 372 12 109 643 883 1412 1.35e-48 185
MS.gene020830.t1 MTR_7g098750 24.144 584 372 19 98 629 151 715 1.62e-30 129
MS.gene020830.t1 MTR_4g011640 27.440 543 359 13 109 636 863 1385 2.02e-48 184
MS.gene020830.t1 MTR_4g011640 29.444 360 202 12 85 398 146 499 4.30e-32 134
MS.gene020830.t1 MTR_2g102640 27.890 545 358 12 109 638 858 1382 3.75e-48 183
MS.gene020830.t1 MTR_2g102640 24.959 609 374 19 98 648 156 739 1.05e-33 139
MS.gene020830.t1 MTR_2g102660 27.440 543 363 12 109 638 855 1379 4.07e-48 183
MS.gene020830.t1 MTR_2g102660 24.671 608 377 18 98 648 156 739 1.47e-34 142
MS.gene020830.t1 MTR_4g113070 28.229 542 341 13 109 628 844 1359 4.13e-48 183
MS.gene020830.t1 MTR_4g113070 24.468 564 349 15 108 616 149 690 1.74e-25 113
MS.gene020830.t1 MTR_7g098740 26.545 550 369 12 109 643 841 1370 6.99e-48 182
MS.gene020830.t1 MTR_7g098740 29.836 305 177 8 77 345 130 433 2.44e-30 128
MS.gene020830.t1 MTR_7g098370 26.259 556 363 14 109 643 841 1370 8.47e-48 182
MS.gene020830.t1 MTR_7g098370 30.640 297 166 9 85 345 141 433 3.99e-30 128
MS.gene020830.t1 MTR_1g011640 26.072 583 376 14 61 625 821 1366 1.28e-47 182
MS.gene020830.t1 MTR_1g011640 30.403 273 153 8 109 345 154 425 5.40e-24 108
MS.gene020830.t1 MTR_7g098750 26.923 520 348 12 109 614 883 1384 1.78e-47 181
MS.gene020830.t1 MTR_7g098750 24.144 584 372 19 98 629 151 715 1.19e-30 129
MS.gene020830.t1 MTR_2g102670 27.440 543 363 12 109 638 838 1362 1.90e-47 181
MS.gene020830.t1 MTR_2g102670 22.937 606 372 17 98 648 156 721 4.53e-28 121
MS.gene020830.t1 MTR_4g011630 27.656 546 356 16 109 636 866 1390 3.15e-47 181
MS.gene020830.t1 MTR_4g011630 29.880 415 222 14 88 451 152 548 1.93e-32 135
MS.gene020830.t1 MTR_7g101780 31.006 487 291 13 105 555 510 987 3.52e-47 180
MS.gene020830.t1 MTR_8g014360 30.732 410 254 10 109 506 905 1296 4.03e-47 180
MS.gene020830.t1 MTR_8g014360 24.417 557 368 14 108 621 177 723 4.58e-34 140
MS.gene020830.t1 MTR_3g107870 26.632 582 379 14 61 628 857 1404 2.02e-46 178
MS.gene020830.t1 MTR_3g107870 25.926 567 357 19 98 616 155 706 4.28e-34 140
MS.gene020830.t1 MTR_1g063920 29.652 489 297 13 105 559 489 964 3.89e-46 177
MS.gene020830.t1 MTR_7g098320 26.087 552 371 12 108 643 874 1404 7.13e-46 176
MS.gene020830.t1 MTR_7g098320 30.847 295 167 8 87 345 136 429 1.11e-29 126
MS.gene020830.t1 MTR_4g011620 29.583 480 288 15 109 560 856 1313 8.25e-46 176
MS.gene020830.t1 MTR_4g011620 24.437 577 373 16 100 628 152 713 1.00e-31 133
MS.gene020830.t1 MTR_4g058000 30.550 491 290 11 105 555 503 982 3.55e-45 174
MS.gene020830.t1 MTR_7g098300 26.812 552 361 13 109 643 879 1404 4.27e-45 174
MS.gene020830.t1 MTR_7g098300 31.408 277 153 8 105 345 158 433 6.52e-29 124
MS.gene020830.t1 MTR_3g040670 42.857 245 130 7 129 367 201 441 4.34e-42 159
MS.gene020830.t1 MTR_7g098320 27.913 412 263 10 109 506 875 1266 1.05e-39 157
MS.gene020830.t1 MTR_7g098320 30.847 295 167 8 87 345 136 429 1.50e-29 126
MS.gene020830.t1 MTR_2g095390 25.072 690 416 23 46 678 55 700 1.51e-38 152
MS.gene020830.t1 MTR_7g098890 26.268 552 338 19 108 627 783 1297 1.22e-34 142
MS.gene020830.t1 MTR_7g098890 29.795 292 180 12 61 331 86 373 9.60e-24 107
MS.gene020830.t1 MTR_4g089130 51.923 104 39 1 224 327 1 93 8.83e-27 105
MS.gene020830.t1 MTR_7g407080 22.727 506 312 15 125 609 128 575 5.17e-25 110
MS.gene020830.t1 MTR_8g103450 29.066 289 157 10 8 291 162 407 2.62e-23 103
MS.gene020830.t1 MTR_1567s0010 31.282 195 121 6 117 308 250 434 3.23e-20 94.4
MS.gene020830.t1 MTR_7g060570 30.932 236 118 7 119 350 938 1132 9.20e-19 91.7
MS.gene020830.t1 MTR_7g091350 53.750 80 37 0 232 311 81 160 3.30e-17 79.7
MS.gene020830.t1 MTR_4g109720 31.754 211 131 9 109 314 404 606 4.75e-17 85.5
MS.gene020830.t1 MTR_7g079540 30.435 230 130 8 107 314 98 319 7.65e-17 82.8
MS.gene020830.t1 MTR_3g086430 29.310 232 146 8 107 328 1016 1239 9.46e-17 85.1
MS.gene020830.t1 MTR_7g033710 30.357 224 126 11 109 318 442 649 1.09e-16 84.7
MS.gene020830.t1 MTR_5g075955 30.660 212 135 7 107 314 367 570 7.34e-16 81.6
MS.gene020830.t1 MTR_5g075960 30.660 212 135 7 107 314 481 684 8.23e-16 81.6
MS.gene020830.t1 MTR_5g075955 30.660 212 135 7 107 314 479 682 1.10e-15 81.3
MS.gene020830.t1 MTR_3g093430 30.201 298 176 15 107 393 379 655 2.43e-15 80.9
MS.gene020830.t1 MTR_7g079540 30.144 209 117 7 107 293 98 299 1.85e-14 75.1
MS.gene020830.t1 MTR_8g022270 26.645 304 189 11 109 399 615 897 1.92e-14 77.8
MS.gene020830.t1 MTR_8g022270 30.093 216 138 8 108 319 1258 1464 3.56e-12 70.5
MS.gene020830.t1 MTR_7g102070 32.039 206 126 8 109 309 443 639 2.83e-14 77.4
MS.gene020830.t1 MTR_6g009080 29.245 212 134 7 108 309 229 434 3.30e-14 75.9
MS.gene020830.t1 MTR_1g059830 31.507 219 122 9 103 308 390 593 4.76e-14 75.9
MS.gene020830.t1 MTR_6g008820 29.384 211 136 7 109 314 806 1008 7.52e-14 75.9
MS.gene020830.t1 MTR_6g008820 29.384 211 136 7 109 314 890 1092 7.74e-14 75.9
MS.gene020830.t1 MTR_6g008820 28.378 222 147 7 109 326 236 449 9.85e-11 65.9
MS.gene020830.t1 MTR_6g008820 29.384 211 136 7 109 314 698 900 7.87e-14 75.9
MS.gene020830.t1 MTR_6g008820 28.378 222 147 7 109 326 44 257 9.33e-11 65.9
MS.gene020830.t1 MTR_6g008820 29.384 211 136 7 109 314 1020 1222 8.11e-14 75.9
MS.gene020830.t1 MTR_6g008820 28.378 222 147 7 109 326 366 579 9.82e-11 65.9
MS.gene020830.t1 MTR_1g025560 31.771 192 117 7 108 293 1010 1193 2.89e-13 73.9
MS.gene020830.t1 MTR_1g063170 32.039 206 126 9 109 309 416 612 3.23e-13 73.9
MS.gene020830.t1 MTR_6g008800 28.436 211 135 7 109 309 1024 1228 3.57e-13 73.6
MS.gene020830.t1 MTR_6g008800 30.890 191 118 7 109 293 378 560 2.63e-11 67.8
MS.gene020830.t1 MTR_4g108153 28.646 192 126 5 101 289 582 765 4.00e-13 73.6
MS.gene020830.t1 MTR_5g033080 26.364 220 141 8 109 318 298 506 4.14e-13 72.8
MS.gene020830.t1 MTR_5g029750 29.310 232 146 10 74 293 330 555 4.50e-13 73.6
MS.gene020830.t1 MTR_5g029750 29.048 210 137 8 109 314 1006 1207 1.04e-11 68.9
MS.gene020830.t1 MTR_5g033080 26.364 220 141 8 109 318 473 681 4.72e-13 72.8
MS.gene020830.t1 MTR_6g009150 28.910 211 134 7 109 309 1034 1238 5.68e-13 73.2
MS.gene020830.t1 MTR_6g009150 30.049 203 129 7 98 293 365 561 1.28e-11 68.6
MS.gene020830.t1 MTR_3g107800 28.750 240 151 9 109 338 413 642 8.79e-13 72.4
MS.gene020830.t1 MTR_6g009200 29.245 212 136 7 109 314 1037 1240 1.05e-12 72.4
MS.gene020830.t1 MTR_6g009200 31.461 178 112 6 120 293 389 560 4.30e-11 67.0
MS.gene020830.t1 MTR_6g009030 28.910 211 134 7 109 309 1016 1220 1.35e-12 72.0
MS.gene020830.t1 MTR_6g009030 30.526 190 122 6 108 293 377 560 1.98e-11 68.2
MS.gene020830.t1 MTR_4g108163 28.272 191 126 5 102 289 613 795 2.18e-12 70.9
MS.gene020830.t1 MTR_6g009070 27.459 244 157 10 109 342 951 1184 2.26e-12 71.2
MS.gene020830.t1 MTR_6g009070 29.412 221 140 7 83 293 286 500 2.57e-11 67.8
MS.gene020830.t1 MTR_4g108170 27.723 202 134 6 120 318 628 820 3.71e-12 70.5
MS.gene020830.t1 MTR_6g009110 29.864 221 139 8 83 293 353 567 3.79e-12 70.5
MS.gene020830.t1 MTR_6g009110 28.302 212 138 7 109 314 1035 1238 7.26e-12 69.3
MS.gene020830.t1 MTR_6g009090 32.044 181 112 7 118 293 401 575 4.17e-12 69.7
MS.gene020830.t1 MTR_1309s0010 27.419 248 153 9 71 309 408 637 4.34e-12 69.7
MS.gene020830.t1 MTR_4g081190 29.897 194 120 8 107 293 1005 1189 4.73e-12 70.1
MS.gene020830.t1 MTR_3g099990 28.495 186 116 6 110 289 545 719 1.14e-11 68.6
MS.gene020830.t1 MTR_4g108240 27.225 191 128 5 102 289 625 807 1.18e-11 68.6
MS.gene020830.t1 MTR_4g124050 31.604 212 129 8 109 314 413 614 1.58e-11 68.2
MS.gene020830.t1 MTR_7g091380 30.201 149 94 3 120 266 583 723 1.65e-11 68.6
MS.gene020830.t1 MTR_4g124050 31.604 212 129 8 109 314 413 614 1.76e-11 68.2
MS.gene020830.t1 MTR_4g124050 30.000 210 121 10 98 293 1053 1250 9.23e-11 65.9
MS.gene020830.t1 MTR_7g091380 30.201 149 94 3 120 266 381 521 1.79e-11 68.2
MS.gene020830.t1 MTR_7g091380 30.201 149 94 3 120 266 583 723 1.99e-11 68.2
MS.gene020830.t1 MTR_7g091380 30.201 149 94 3 120 266 401 541 2.00e-11 68.2
MS.gene020830.t1 MTR_4g123990 29.245 212 134 8 109 314 395 596 4.77e-11 67.0
MS.gene020830.t1 MTR_3g080220 29.018 224 141 8 107 320 410 625 4.94e-11 66.6
MS.gene020830.t1 MTR_4g108240 26.842 190 128 5 101 287 624 805 7.38e-11 65.9
MS.gene020830.t1 MTR_3g437990 28.108 185 118 5 110 289 545 719 8.27e-11 65.9
MS.gene020830.t1 MTR_6g011680 28.571 189 125 6 109 293 1025 1207 8.76e-11 65.9
MS.gene020830.t1 MTR_1g099280 24.051 237 157 9 75 308 627 843 9.72e-11 65.9
MS.gene020830.t1 MTR_1g099280 24.490 245 161 10 67 308 595 818 9.85e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020830.t1 AT3G13220 72.605 668 176 5 23 684 16 682 0.0 1003
MS.gene020830.t1 AT5G06530 43.578 654 305 8 47 680 137 746 0.0 557
MS.gene020830.t1 AT5G06530 43.578 654 305 8 47 680 137 746 0.0 557
MS.gene020830.t1 AT1G31770 44.677 620 315 7 64 680 50 644 5.24e-176 517
MS.gene020830.t1 AT5G06530 44.768 583 274 7 47 609 137 691 7.56e-175 515
MS.gene020830.t1 AT3G25620 43.153 628 323 9 64 679 65 670 4.57e-166 492
MS.gene020830.t1 AT4G27420 40.611 655 350 8 41 680 1 631 1.19e-163 485
MS.gene020830.t1 AT5G06530 46.230 504 243 5 126 609 1 496 3.96e-160 471
MS.gene020830.t1 AT1G71960 38.923 650 359 12 53 680 26 659 6.65e-149 448
MS.gene020830.t1 AT3G25620 44.794 413 203 7 64 468 65 460 2.88e-109 339
MS.gene020830.t1 AT2G01320 30.810 568 370 10 70 627 51 605 2.65e-79 266
MS.gene020830.t1 AT2G01320 30.810 568 370 10 70 627 51 605 2.65e-79 266
MS.gene020830.t1 AT2G01320 30.810 568 370 10 70 627 51 605 1.43e-78 265
MS.gene020830.t1 AT2G01320 30.810 568 370 10 70 627 51 605 1.63e-78 265
MS.gene020830.t1 AT2G01320 30.810 568 370 10 70 627 51 605 1.76e-78 265
MS.gene020830.t1 AT2G01320 30.810 568 370 10 70 627 51 605 1.76e-78 265
MS.gene020830.t1 AT2G13610 32.051 624 384 17 77 679 32 636 2.20e-75 255
MS.gene020830.t1 AT2G01320 31.743 482 308 9 70 543 51 519 3.27e-70 238
MS.gene020830.t1 AT2G01320 31.743 482 308 9 70 543 51 519 3.27e-70 238
MS.gene020830.t1 AT3G21090 31.424 611 356 18 107 679 43 628 1.58e-66 232
MS.gene020830.t1 AT2G37360 27.393 679 402 16 64 678 95 746 3.87e-65 229
MS.gene020830.t1 AT3G53510 28.549 634 364 15 107 678 124 730 1.68e-62 222
MS.gene020830.t1 AT3G55100 28.047 681 403 18 50 678 8 653 1.13e-61 218
MS.gene020830.t1 AT3G55100 28.047 681 403 18 50 678 8 653 1.13e-61 218
MS.gene020830.t1 AT3G55130 28.921 695 370 24 62 678 68 716 2.32e-61 218
MS.gene020830.t1 AT1G51500 30.629 604 339 19 50 616 1 561 4.05e-61 217
MS.gene020830.t1 AT3G55110 30.127 551 348 13 107 637 89 622 5.23e-61 217
MS.gene020830.t1 AT1G51460 31.319 546 321 12 107 616 28 555 4.87e-60 214
MS.gene020830.t1 AT3G53480 28.905 557 357 11 103 642 871 1405 5.17e-60 219
MS.gene020830.t1 AT3G53480 24.370 595 339 22 85 609 165 718 4.69e-29 124
MS.gene020830.t1 AT3G55090 30.052 579 347 17 104 646 102 658 1.39e-59 214
MS.gene020830.t1 AT2G39350 30.000 560 335 15 105 626 105 645 6.15e-59 212
MS.gene020830.t1 AT4G25750 29.125 594 352 20 109 683 30 573 9.93e-59 208
MS.gene020830.t1 AT1G17840 30.864 567 315 18 103 628 63 593 3.16e-58 209
MS.gene020830.t1 AT1G53270 31.203 532 323 14 107 628 48 546 5.68e-58 206
MS.gene020830.t1 AT1G59870 29.027 596 375 15 61 642 861 1422 1.49e-57 212
MS.gene020830.t1 AT1G59870 25.512 635 368 20 108 673 185 783 3.79e-37 150
MS.gene020830.t1 AT4G15230 29.250 547 353 12 97 628 814 1341 2.43e-57 211
MS.gene020830.t1 AT4G15230 31.502 273 150 7 109 345 156 427 4.33e-32 134
MS.gene020830.t1 AT4G15230 29.250 547 353 12 97 628 814 1341 2.43e-57 211
MS.gene020830.t1 AT4G15230 31.502 273 150 7 109 345 156 427 4.33e-32 134
MS.gene020830.t1 AT4G15230 29.250 547 353 12 97 628 735 1262 3.65e-57 211
MS.gene020830.t1 AT4G15230 31.502 273 150 7 109 345 77 348 4.45e-32 134
MS.gene020830.t1 AT5G13580 30.128 624 360 20 42 628 49 633 1.38e-56 205
MS.gene020830.t1 AT2G37010 30.229 612 358 19 105 678 496 1076 3.77e-56 207
MS.gene020830.t1 AT2G37010 30.229 612 358 19 105 678 496 1076 3.77e-56 207
MS.gene020830.t1 AT4G15233 27.121 601 382 12 42 628 775 1333 4.25e-56 207
MS.gene020830.t1 AT4G15233 29.651 344 196 12 42 345 89 426 1.01e-30 130
MS.gene020830.t1 AT3G16340 29.368 538 339 10 109 628 836 1350 4.42e-56 207
MS.gene020830.t1 AT3G16340 25.445 562 349 17 108 620 161 701 1.49e-30 129
MS.gene020830.t1 AT4G15233 27.409 602 379 14 42 628 713 1271 4.50e-56 207
MS.gene020830.t1 AT4G15233 29.651 344 196 12 42 345 27 364 8.81e-31 130
MS.gene020830.t1 AT4G15233 27.409 602 379 14 42 628 713 1271 4.50e-56 207
MS.gene020830.t1 AT4G15233 29.651 344 196 12 42 345 27 364 8.81e-31 130
MS.gene020830.t1 AT3G16340 29.368 538 339 10 109 628 841 1355 4.59e-56 207
MS.gene020830.t1 AT3G16340 25.933 563 350 18 108 620 161 706 2.73e-32 134
MS.gene020830.t1 AT2G37280 26.619 556 375 10 103 644 676 1212 4.97e-56 207
MS.gene020830.t1 AT2G37280 23.704 540 328 18 125 606 12 525 6.00e-28 121
MS.gene020830.t1 AT4G15233 27.121 601 382 12 42 628 757 1315 4.98e-56 207
MS.gene020830.t1 AT4G15233 30.675 326 198 11 42 345 89 408 1.48e-32 135
MS.gene020830.t1 AT2G37280 26.619 556 375 10 103 644 863 1399 5.25e-56 207
MS.gene020830.t1 AT2G37280 22.660 609 358 18 85 606 130 712 1.27e-28 123
MS.gene020830.t1 AT2G37280 26.619 556 375 10 103 644 834 1370 5.32e-56 207
MS.gene020830.t1 AT2G37280 24.071 565 345 18 100 606 145 683 4.71e-32 134
MS.gene020830.t1 AT4G15233 27.121 601 382 12 42 628 766 1324 5.85e-56 207
MS.gene020830.t1 AT4G15233 28.488 344 191 13 42 345 89 417 1.98e-26 116
MS.gene020830.t1 AT2G29940 30.754 517 324 12 109 610 853 1350 5.92e-56 207
MS.gene020830.t1 AT2G29940 25.303 577 355 18 108 629 174 729 1.86e-33 138
MS.gene020830.t1 AT4G15236 27.121 601 382 12 42 628 773 1331 9.49e-56 206
MS.gene020830.t1 AT4G15236 24.801 629 396 21 43 616 86 692 1.28e-33 139
MS.gene020830.t1 AT3G30842 26.758 583 377 14 61 628 815 1362 7.00e-55 204
MS.gene020830.t1 AT3G30842 24.382 607 386 22 65 615 111 700 2.99e-34 140
MS.gene020830.t1 AT1G66950 27.444 583 375 12 42 606 821 1373 1.00e-54 203
MS.gene020830.t1 AT1G66950 23.273 666 419 20 71 673 152 788 3.97e-31 131
MS.gene020830.t1 AT1G15210 28.183 589 361 16 61 628 834 1381 1.88e-54 202
MS.gene020830.t1 AT1G15210 23.975 634 383 19 44 620 137 728 5.42e-33 137
MS.gene020830.t1 AT2G36380 28.625 531 319 13 109 611 879 1377 4.29e-54 201
MS.gene020830.t1 AT2G36380 23.617 669 445 17 61 677 136 790 4.56e-35 143
MS.gene020830.t1 AT4G15233 26.635 627 376 15 42 628 775 1357 1.59e-53 200
MS.gene020830.t1 AT4G15233 29.651 344 196 12 42 345 89 426 1.26e-30 129
MS.gene020830.t1 AT2G26910 27.768 587 392 10 109 681 845 1413 5.61e-53 198
MS.gene020830.t1 AT2G26910 25.040 619 376 20 65 616 93 690 4.85e-31 130
MS.gene020830.t1 AT5G52860 28.099 605 342 21 109 683 44 585 9.41e-53 192
MS.gene020830.t1 AT4G15215 30.364 550 343 14 97 628 811 1338 1.51e-52 197
MS.gene020830.t1 AT4G15215 30.938 320 180 9 65 345 107 424 9.84e-35 142
MS.gene020830.t1 AT4G15215 30.364 550 343 14 97 628 804 1331 1.64e-52 197
MS.gene020830.t1 AT4G15215 29.781 319 178 8 65 345 107 417 1.34e-32 135
MS.gene020830.t1 AT4G15215 30.364 550 343 14 97 628 801 1328 1.68e-52 197
MS.gene020830.t1 AT4G15215 29.781 319 178 8 65 345 104 414 1.38e-32 135
MS.gene020830.t1 AT4G15215 30.364 550 343 14 97 628 801 1328 1.68e-52 197
MS.gene020830.t1 AT4G15215 29.781 319 178 8 65 345 104 414 1.38e-32 135
MS.gene020830.t1 AT4G15215 30.364 550 343 14 97 628 801 1328 1.68e-52 197
MS.gene020830.t1 AT4G15215 29.781 319 178 8 65 345 104 414 1.38e-32 135
MS.gene020830.t1 AT4G15215 30.364 550 343 14 97 628 801 1328 1.68e-52 197
MS.gene020830.t1 AT4G15215 29.781 319 178 8 65 345 104 414 1.38e-32 135
MS.gene020830.t1 AT4G15230 28.902 519 335 11 97 602 814 1311 1.79e-52 196
MS.gene020830.t1 AT4G15230 31.502 273 150 7 109 345 156 427 6.70e-32 133
MS.gene020830.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 2.14e-52 196
MS.gene020830.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.27e-34 142
MS.gene020830.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 2.14e-52 196
MS.gene020830.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.27e-34 142
MS.gene020830.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 2.14e-52 196
MS.gene020830.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.27e-34 142
MS.gene020830.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 2.14e-52 196
MS.gene020830.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.27e-34 142
MS.gene020830.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 2.14e-52 196
MS.gene020830.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.27e-34 142
MS.gene020830.t1 AT4G15233 28.096 541 354 13 103 628 670 1190 3.98e-52 195
MS.gene020830.t1 AT4G15233 30.675 326 198 11 42 345 27 346 1.16e-32 135
MS.gene020830.t1 AT4G15233 28.096 541 354 13 103 628 670 1190 3.98e-52 195
MS.gene020830.t1 AT4G15233 30.675 326 198 11 42 345 27 346 1.16e-32 135
MS.gene020830.t1 AT2G37280 27.680 513 336 11 103 602 834 1324 7.40e-52 194
MS.gene020830.t1 AT2G37280 24.071 565 345 18 100 606 145 683 5.51e-32 134
MS.gene020830.t1 AT1G15520 27.903 534 352 11 109 628 852 1366 1.67e-51 194
MS.gene020830.t1 AT1G15520 25.550 591 355 21 96 627 156 720 2.12e-34 141
MS.gene020830.t1 AT5G19410 29.118 601 358 22 105 681 71 627 2.27e-51 189
MS.gene020830.t1 AT5G19410 29.118 601 358 22 105 681 62 618 2.28e-51 189
MS.gene020830.t1 AT1G53390 31.064 470 281 10 107 543 521 980 1.51e-50 190
MS.gene020830.t1 AT5G60740 31.818 484 295 10 105 555 511 992 4.88e-48 183
MS.gene020830.t1 AT1G15520 28.979 421 269 9 109 517 852 1254 2.84e-44 172
MS.gene020830.t1 AT1G15520 25.550 591 355 21 96 627 156 720 1.58e-34 141
MS.gene020830.t1 AT2G28070 25.741 641 428 17 61 679 94 708 7.67e-42 162
MS.gene020830.t1 AT2G28070 25.741 641 428 17 61 679 94 708 7.67e-42 162
MS.gene020830.t1 AT5G39040 33.333 204 125 6 109 308 413 609 2.62e-17 86.7
MS.gene020830.t1 AT1G65410 30.435 230 130 8 107 314 97 318 5.15e-17 83.6
MS.gene020830.t1 AT3G47750 26.160 237 150 8 87 308 602 828 3.86e-15 80.1
MS.gene020830.t1 AT4G28620 30.660 212 135 8 107 314 452 655 8.16e-15 78.6
MS.gene020830.t1 AT5G58270 29.245 212 138 6 107 314 492 695 1.27e-14 78.2
MS.gene020830.t1 AT4G25960 30.516 213 124 9 116 318 425 623 2.38e-14 77.8
MS.gene020830.t1 AT4G25960 31.188 202 127 8 120 317 1058 1251 3.54e-11 67.4
MS.gene020830.t1 AT3G47790 24.434 221 155 5 101 318 598 809 4.95e-14 76.3
MS.gene020830.t1 AT1G70610 26.638 229 129 7 109 318 291 499 1.06e-13 74.7
MS.gene020830.t1 AT1G70610 26.638 229 129 7 109 318 472 680 1.22e-13 75.1
MS.gene020830.t1 AT5G61700 25.000 228 148 6 77 289 572 791 1.28e-13 75.1
MS.gene020830.t1 AT5G61700 25.000 228 148 6 77 289 572 791 1.28e-13 75.1
MS.gene020830.t1 AT3G28390 29.365 252 156 10 77 315 959 1201 1.51e-13 75.1
MS.gene020830.t1 AT3G28390 29.952 207 131 9 120 321 375 572 5.83e-13 73.2
MS.gene020830.t1 AT5G61690 29.319 191 107 8 110 289 548 721 2.01e-13 74.3
MS.gene020830.t1 AT3G47730 28.796 191 109 7 110 289 547 721 2.46e-13 74.3
MS.gene020830.t1 AT3G28415 30.332 211 135 8 109 314 1001 1204 2.79e-13 74.3
MS.gene020830.t1 AT3G28415 31.579 209 131 8 117 321 371 571 1.84e-12 71.6
MS.gene020830.t1 AT1G10680 32.086 187 105 8 117 293 386 560 2.80e-13 73.9
MS.gene020830.t1 AT5G61730 30.481 187 111 7 110 289 539 713 2.82e-13 73.9
MS.gene020830.t1 AT1G10680 32.086 187 105 8 117 293 386 560 3.12e-13 73.9
MS.gene020830.t1 AT1G10680 30.653 199 126 7 120 314 1010 1200 3.09e-11 67.4
MS.gene020830.t1 AT1G27940 28.505 214 141 7 109 318 807 1012 3.17e-13 73.9
MS.gene020830.t1 AT1G27940 31.250 208 123 11 109 308 174 369 2.00e-12 71.2
MS.gene020830.t1 AT3G28415 30.332 211 135 8 109 314 993 1196 3.17e-13 73.9
MS.gene020830.t1 AT3G28415 31.579 209 131 8 117 321 363 563 2.00e-12 71.2
MS.gene020830.t1 AT1G27940 28.505 214 141 7 109 318 1021 1226 3.33e-13 73.9
MS.gene020830.t1 AT1G27940 31.250 208 123 11 109 308 388 583 1.89e-12 71.6
MS.gene020830.t1 AT5G61730 30.481 187 111 7 110 289 549 723 3.36e-13 73.6
MS.gene020830.t1 AT3G47790 24.000 225 155 5 75 296 572 783 3.90e-13 73.6
MS.gene020830.t1 AT5G61690 28.272 191 110 7 110 289 548 722 4.14e-13 73.6
MS.gene020830.t1 AT3G47790 24.000 225 155 5 75 296 453 664 4.24e-13 73.2
MS.gene020830.t1 AT5G61740 26.877 253 167 9 70 318 572 810 4.72e-13 73.2
MS.gene020830.t1 AT5G61740 26.877 253 167 9 70 318 538 776 4.92e-13 73.2
MS.gene020830.t1 AT5G61740 26.877 253 167 9 70 318 433 671 5.31e-13 72.8
MS.gene020830.t1 AT3G28345 32.778 180 107 7 120 293 387 558 5.85e-13 73.2
MS.gene020830.t1 AT3G28345 30.357 224 144 7 109 324 1012 1231 9.51e-12 69.3
MS.gene020830.t1 AT4G28630 28.774 212 139 8 107 314 450 653 6.20e-13 72.8
MS.gene020830.t1 AT1G28010 30.435 207 126 10 109 308 389 584 1.08e-12 72.4
MS.gene020830.t1 AT1G28010 28.972 214 140 8 109 318 1023 1228 2.19e-12 71.2
MS.gene020830.t1 AT3G28380 31.280 211 133 8 108 314 375 577 2.18e-12 71.2
MS.gene020830.t1 AT3G28380 30.000 220 134 10 117 324 1020 1231 6.51e-11 66.6
MS.gene020830.t1 AT3G47770 26.190 210 143 6 102 308 597 797 2.95e-12 70.5
MS.gene020830.t1 AT2G36910 30.583 206 129 8 109 309 385 581 3.30e-12 70.9
MS.gene020830.t1 AT3G47740 24.153 236 156 7 87 308 597 823 4.23e-12 70.1
MS.gene020830.t1 AT3G47770 26.190 210 143 6 102 308 623 823 4.75e-12 70.1
MS.gene020830.t1 AT3G62150 28.302 212 136 7 109 314 420 621 7.91e-12 69.3
MS.gene020830.t1 AT3G62150 28.302 212 136 7 109 314 420 621 7.91e-12 69.3
MS.gene020830.t1 AT3G62150 28.302 212 136 7 109 314 420 621 7.91e-12 69.3
MS.gene020830.t1 AT2G41700 25.641 195 129 7 101 289 1423 1607 1.68e-11 68.6
MS.gene020830.t1 AT2G41700 26.180 233 147 9 41 266 434 648 2.57e-11 67.8
MS.gene020830.t1 AT2G41700 25.641 195 129 7 101 289 1465 1649 1.90e-11 68.2
MS.gene020830.t1 AT2G41700 26.180 233 147 9 41 266 504 718 3.14e-11 67.8
MS.gene020830.t1 AT5G46540 28.571 217 129 9 109 314 374 575 4.63e-11 67.0
MS.gene020830.t1 AT5G46540 32.934 167 80 6 116 266 1029 1179 9.41e-11 65.9

Find 135 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTCTACATTTGCATATTT+TGG 0.095054 5.4:+75547415 MS.gene020830:CDS
GGCTCTTTGCTTTCGGTTCT+TGG 0.111838 5.4:+75548446 MS.gene020830:CDS
CTTGGAATTGCACTTCTATT+AGG 0.177019 5.4:+75547160 MS.gene020830:CDS
GAAGGCTCTCCTGTTTATTA+TGG 0.192438 5.4:+75546660 MS.gene020830:CDS
CGGCGAAATTCTTGCTTTGA+TGG 0.209208 5.4:+75545816 MS.gene020830:CDS
GCTGGATTCATTGGTATTTC+CGG 0.213071 5.4:-75546729 None:intergenic
CTTATGTTATTCCTTCTTAC+AGG 0.228543 5.4:+75547852 MS.gene020830:CDS
ACTCAAGTATAAAGACATTT+TGG 0.230089 5.4:+75546958 MS.gene020830:CDS
TTTGACATCATTGTCTTTAC+AGG 0.238405 5.4:-75545715 None:intergenic
CATGCTTATTGTGTACTTCA+TGG 0.253005 5.4:+75547593 MS.gene020830:CDS
CTTCTAAAAGTGCAATATTC+AGG 0.260030 5.4:+75548306 MS.gene020830:CDS
TGCTAGACACACACCTTTCT+AGG 0.276132 5.4:-75546202 None:intergenic
CATTCATGTACTATGGATTC+AGG 0.279268 5.4:+75548280 MS.gene020830:CDS
CCCTTCAGTGGCGATTATTA+AGG 0.290816 5.4:+75546836 MS.gene020830:CDS
CTGGATTCATTGGTATTTCC+GGG 0.294967 5.4:-75546728 None:intergenic
TTGGAATTGCACTTCTATTA+GGG 0.313501 5.4:+75547161 MS.gene020830:CDS
ACATCTTCAACTAGCTATTC+AGG 0.321562 5.4:+75547027 MS.gene020830:CDS
AAGGTGGCTTAAGTGAAGTT+TGG 0.323854 5.4:+75548409 MS.gene020830:CDS
CTTGCTTTGATGGGTCCTTC+TGG 0.338717 5.4:+75545826 MS.gene020830:CDS
CGCTTTCACATTCATATAGT+TGG 0.341387 5.4:-75548332 None:intergenic
ACTAGCTATTCAGGTCAAAA+AGG 0.345576 5.4:+75547036 MS.gene020830:CDS
TGATCTTCTCTGCATTCTTA+AGG 0.348445 5.4:+75546114 MS.gene020830:CDS
TACATGTCATTCATGTACTA+TGG 0.353628 5.4:+75548273 MS.gene020830:CDS
TTCTTGCTTGACTTGGCAAC+TGG 0.354225 5.4:+75546756 MS.gene020830:CDS
TCTTATAAAGAATGGTGAAT+TGG 0.356972 5.4:-75547081 None:intergenic
TAGCCATGGCTCTTTGCTTT+CGG 0.358126 5.4:+75548439 MS.gene020830:CDS
AAGAATTCTGCTGGATTCAT+TGG 0.359339 5.4:-75546738 None:intergenic
TTCACTACCTTGAGATATAC+AGG 0.361221 5.4:-75545138 None:intergenic
CACTTCTATTAGGGCTACTT+TGG 0.361800 5.4:+75547170 MS.gene020830:CDS
AAACTTCTTCTCACTCTTCA+AGG 0.370422 5.4:+75546466 MS.gene020830:CDS
AGCAGAATTCTTGCTTGACT+TGG 0.376774 5.4:+75546749 MS.gene020830:CDS
GTTGGTTCCATGCAGATTGC+AGG 0.381171 5.4:+75545006 MS.gene020830:CDS
ATAGCTAGTTGAAGATGTTT+TGG 0.386185 5.4:-75547022 None:intergenic
AAGGCTCTCCTGTTTATTAT+GGG 0.387461 5.4:+75546661 MS.gene020830:CDS
GGATATCTCAAAGGAATATC+AGG 0.392776 5.4:+75546340 MS.gene020830:CDS
ATGCAGATTGCAGGAAGCTT+TGG 0.396748 5.4:+75545015 MS.gene020830:CDS
ACAACCTTGTTAAGAGTTGT+AGG 0.411458 5.4:+75545859 MS.gene020830:CDS
CTACTTGATGAGCCAACTTC+AGG 0.414761 5.4:+75546421 MS.gene020830:CDS
TTCAACCATTGCATGAACTT+TGG 0.419064 5.4:-75548249 None:intergenic
CTAGCCTTCCCATAATAAAC+AGG 0.420381 5.4:-75546669 None:intergenic
TTCTATTAGGGCTACTTTGG+TGG 0.423031 5.4:+75547173 MS.gene020830:CDS
CTTATTGTGTACTTCATGGC+TGG 0.423664 5.4:+75547597 MS.gene020830:CDS
TTGAGATTGGTTCAAGCACT+TGG 0.426645 5.4:+75547142 MS.gene020830:CDS
GGCGAAATTCTTGCTTTGAT+GGG 0.427925 5.4:+75545817 MS.gene020830:CDS
TTTCTTCAACTGTAAGTTGT+GGG 0.436204 5.4:-75546088 None:intergenic
GAGAATACTATCAAGGATCT+AGG 0.450601 5.4:+75546179 MS.gene020830:CDS
TTGATGGGTCCTTCTGGTAG+TGG 0.455405 5.4:+75545832 MS.gene020830:CDS
CTCAGGCATACCTTCACAAT+AGG 0.457158 5.4:+75545058 MS.gene020830:CDS
TTCATCCTTGAGGTTCGTCC+CGG 0.463028 5.4:+75546710 MS.gene020830:CDS
TCGGAGTTGAGCCTCTGTAT+TGG 0.465444 5.4:-75547206 None:intergenic
AAGAAGTTTGTTTGCTGAGG+TGG 0.466943 5.4:-75546452 None:intergenic
AGATTACTTGATAATGTAAA+GGG 0.470567 5.4:+75545886 MS.gene020830:CDS
CTATGTATTTCCATTTGAAA+AGG 0.471059 5.4:+75547464 MS.gene020830:CDS
AACATATAGAGCAAGATTCA+AGG 0.476898 5.4:+75547105 MS.gene020830:CDS
CATCAAAGCAAGAATTTCGC+CGG 0.479651 5.4:-75545815 None:intergenic
AAGATTACTTGATAATGTAA+AGG 0.483097 5.4:+75545885 MS.gene020830:CDS
ATATGTTCTCTTATAAAGAA+TGG 0.484237 5.4:-75547089 None:intergenic
TCATCTTTCAAAATATCTTG+TGG 0.484681 5.4:-75546801 None:intergenic
TTTGATACTGTAAACTTGAA+AGG 0.485964 5.4:+75548390 MS.gene020830:CDS
AAGTCAAGCAAGAATTCTGC+TGG 0.490022 5.4:-75546747 None:intergenic
AAGAATTTCATAGCCTATGC+TGG 0.493518 5.4:-75546380 None:intergenic
CAGCATAGAATTCATGTCTC+AGG 0.499450 5.4:+75545041 MS.gene020830:CDS
AGAGATTGACATTCGAGTTG+AGG 0.503993 5.4:+75545086 MS.gene020830:CDS
AAGTTTACAGTATCAAATGA+AGG 0.505100 5.4:-75548384 None:intergenic
ACCTTAATAATCGCCACTGA+AGG 0.506675 5.4:-75546837 None:intergenic
ATCAAAGCAAGAATTTCGCC+GGG 0.507268 5.4:-75545814 None:intergenic
AAGGGTATCACAGGAAGCAT+TGG 0.509325 5.4:+75545790 MS.gene020830:CDS
AGAGGCTCAACTCCGAGATC+AGG 0.509457 5.4:+75547213 MS.gene020830:CDS
AAACATGTTAAAGATTCTGC+TGG 0.514747 5.4:-75546616 None:intergenic
AAGGAATATCAGGAGGAGAA+AGG 0.516071 5.4:+75546350 MS.gene020830:CDS
TCTTGCTTGCTCATGTTGGT+TGG 0.518009 5.4:-75546140 None:intergenic
GTTTCTTCAACTGTAAGTTG+TGG 0.518691 5.4:-75546089 None:intergenic
GTGAAAGCGAAGGAGGGTGC+AGG 0.519396 5.4:+75548346 MS.gene020830:CDS
TACAGGTGGCTACTATGTCC+AGG 0.524500 5.4:+75547869 MS.gene020830:CDS
CTCTCCTGTTTATTATGGGA+AGG 0.524723 5.4:+75546665 MS.gene020830:CDS
GAGCATTCAAAGAGCAGGAA+TGG 0.530777 5.4:+75547815 MS.gene020830:CDS
TAAAGATTCTGCTGGATGGC+TGG 0.531941 5.4:-75546608 None:intergenic
TCAAGGATCTAGGCCTAGAA+AGG 0.537892 5.4:+75546189 MS.gene020830:CDS
ACAATAAGCATGAAAACAGT+AGG 0.539684 5.4:-75547582 None:intergenic
TCATCAAGTAGTAGCAATGA+AGG 0.539700 5.4:-75546409 None:intergenic
CATAGTAGCCACCTGTAAGA+AGG 0.541861 5.4:-75547863 None:intergenic
AGGTATACTTAAGAAAAGAA+AGG 0.543379 5.4:+75547484 MS.gene020830:CDS
ATAGTCCTGCTCTTAAAAGA+AGG 0.544365 5.4:+75545935 MS.gene020830:CDS
TCAATGTCACCTCCATCTGT+TGG 0.548912 5.4:+75544988 MS.gene020830:CDS
ATCACAGGAAGCATTGGCCC+CGG 0.551823 5.4:+75545796 MS.gene020830:CDS
AAAAGGAATGGACAGTGAGT+TGG 0.555020 5.4:+75547053 MS.gene020830:CDS
AAGAGTTGAGAATACTATCA+AGG 0.555684 5.4:+75546172 MS.gene020830:CDS
CCCTCTCCCTGTATATCTCA+AGG 0.560435 5.4:+75545131 MS.gene020830:CDS
ACCTTGAGATATACAGGGAG+AGG 0.561482 5.4:-75545132 None:intergenic
TGTGAGAGAGGATGAGATTG+AGG 0.565020 5.4:+75544957 MS.gene020830:CDS
ATGTTATTCCTTCTTACAGG+TGG 0.566372 5.4:+75547855 MS.gene020830:CDS
CACTCTTCAAGGACTAGCAA+AGG 0.570159 5.4:+75546477 MS.gene020830:CDS
AAAGCTTCCTGCAATCTGCA+TGG 0.573772 5.4:-75545013 None:intergenic
GATACTGTAAACTTGAAAGG+TGG 0.577773 5.4:+75548393 MS.gene020830:CDS
TTGACATCATTGTCTTTACA+GGG 0.580586 5.4:-75545714 None:intergenic
TACCTAGTAGTACCTGATCT+CGG 0.581158 5.4:-75547225 None:intergenic
GTTATGAGCATTCAAAGAGC+AGG 0.582016 5.4:+75547810 MS.gene020830:CDS
CCTTAATAATCGCCACTGAA+GGG 0.583592 5.4:-75546836 None:intergenic
GTGGAATCAAGACCTGAAGT+TGG 0.587104 5.4:-75546433 None:intergenic
TATGAATGTGAAAGCGAAGG+AGG 0.588398 5.4:+75548339 MS.gene020830:CDS
TGTAAAGACAATGATGTCAA+AGG 0.589535 5.4:+75545717 MS.gene020830:CDS
GCAAAACTGAAAATAACGTA+AGG 0.589831 5.4:-75547647 None:intergenic
AAACTTCTTCTGATATCAGA+AGG 0.594489 5.4:+75546642 MS.gene020830:CDS
GAACCGAAAGCAAAGAGCCA+TGG 0.598115 5.4:-75548442 None:intergenic
GAGAAGAAGTTTGTTTGCTG+AGG 0.599548 5.4:-75546455 None:intergenic
AATCGCCACTGAAGGGTCAG+TGG 0.601040 5.4:-75546829 None:intergenic
ATCTGCATGGAACCAACAGA+TGG 0.603528 5.4:-75545000 None:intergenic
TCCTCCTACAACTCTTAACA+AGG 0.606674 5.4:-75545863 None:intergenic
CCTTGAGATATACAGGGAGA+GGG 0.607284 5.4:-75545131 None:intergenic
GATTGGATTTGTAACACAAG+AGG 0.611572 5.4:+75546055 MS.gene020830:CDS
ATGTTAAAGATTCTGCTGGA+TGG 0.613207 5.4:-75546612 None:intergenic
GAAAGGAAGAGAACCAGCAT+AGG 0.618520 5.4:+75546367 MS.gene020830:CDS
TATTTCCGGGACGAACCTCA+AGG 0.628989 5.4:-75546715 None:intergenic
TGGAGGTGACATTGACATGT+TGG 0.632035 5.4:-75544980 None:intergenic
TGCATGGAACCAACAGATGG+AGG 0.632283 5.4:-75544997 None:intergenic
ATAGGTGGAGGATATCTCAA+AGG 0.633463 5.4:+75546331 MS.gene020830:CDS
CTATATGAATGTGAAAGCGA+AGG 0.635438 5.4:+75548336 MS.gene020830:CDS
ATGAATGTGAAAGCGAAGGA+GGG 0.644388 5.4:+75548340 MS.gene020830:CDS
ACATACCAAAGTTCATGCAA+TGG 0.644730 5.4:+75548244 MS.gene020830:CDS
GTTGTCTTTCCACTACCAGA+AGG 0.648172 5.4:-75545841 None:intergenic
AGAATCCACTGACCCTTCAG+TGG 0.654429 5.4:+75546824 MS.gene020830:CDS
TTGAGATATACAGGGAGAGG+GGG 0.657072 5.4:-75545129 None:intergenic
TCTCTGAATACCTATTGTGA+AGG 0.657985 5.4:-75545068 None:intergenic
GATCATGGAAAATGTGAGAG+AGG 0.658226 5.4:+75544945 None:intergenic
AGTTTGGATTCTGATAGCCA+TGG 0.658413 5.4:+75548425 MS.gene020830:CDS
ACCTTGTTAAGAGTTGTAGG+AGG 0.662670 5.4:+75545862 MS.gene020830:CDS
CTTGAGATATACAGGGAGAG+GGG 0.662947 5.4:-75545130 None:intergenic
TCACTACCTTGAGATATACA+GGG 0.676242 5.4:-75545137 None:intergenic
TATCTCAAAGGAATATCAGG+AGG 0.686148 5.4:+75546343 MS.gene020830:CDS
GAAATCTTCAACCAATACAG+AGG 0.691223 5.4:+75547195 MS.gene020830:CDS
CAGCACTCTATGTGACATGG+TGG 0.711905 5.4:+75547545 MS.gene020830:CDS
AAGCAGCACTCTATGTGACA+TGG 0.726541 5.4:+75547542 MS.gene020830:CDS
GGCTGGCTTTAAGAGCACTG+CGG 0.755321 5.4:+75547614 MS.gene020830:CDS
TCAAAGCAAGAATTTCGCCG+GGG 0.774276 5.4:-75545813 None:intergenic
TGGGAAGGCTAGAGACACAG+CGG 0.774897 5.4:+75546680 MS.gene020830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATAGTCATAATATT+TGG - chr5.4:75548151-75548170 None:intergenic 10.0%
!! AAAACTGAATTATACAAATT+AGG + chr5.4:75548096-75548115 MS.gene020830:intron 15.0%
!! GTTAATCGTAATTTATTTAT+AGG + chr5.4:75546863-75546882 MS.gene020830:intron 15.0%
!! TTAAAGTTTAAAGAAAAACA+TGG - chr5.4:75545306-75545325 None:intergenic 15.0%
!!! AAATACAAGACAATTTTAAA+GGG + chr5.4:75545772-75545791 MS.gene020830:CDS 15.0%
!!! ATATTTTGATATATTGAGAT+TGG + chr5.4:75547129-75547148 MS.gene020830:CDS 15.0%
!! AATAGTCATAATATTTGGTT+TGG - chr5.4:75548146-75548165 None:intergenic 20.0%
!! ATATGTTCTCTTATAAAGAA+TGG - chr5.4:75547092-75547111 None:intergenic 20.0%
!! GTTAAACATATATATCTTTG+TGG + chr5.4:75547927-75547946 MS.gene020830:intron 20.0%
!! TATTAACAACAAAAACAACA+GGG - chr5.4:75547762-75547781 None:intergenic 20.0%
!! TGTTAAATTAGATAAATCTG+AGG + chr5.4:75545333-75545352 MS.gene020830:intron 20.0%
!!! AAATCATTTTGAATGCTAAA+AGG - chr5.4:75545498-75545517 None:intergenic 20.0%
!!! AAGATTACTTGATAATGTAA+AGG + chr5.4:75545885-75545904 MS.gene020830:CDS 20.0%
!!! AGATTACTTGATAATGTAAA+GGG + chr5.4:75545886-75545905 MS.gene020830:CDS 20.0%
!!! ATTTGTTATTTTCTTCTACA+TGG - chr5.4:75545756-75545775 None:intergenic 20.0%
!!! CAAATACAAGACAATTTTAA+AGG + chr5.4:75545771-75545790 MS.gene020830:CDS 20.0%
!!! GTTTTATGTAAAGATAGTTT+TGG - chr5.4:75548081-75548100 None:intergenic 20.0%
!!! TGTTGTTTTTGTTGTTAATA+GGG + chr5.4:75547762-75547781 MS.gene020830:intron 20.0%
! AAGTTTAAAGAAAAACATGG+AGG - chr5.4:75545303-75545322 None:intergenic 25.0%
! AAGTTTACAGTATCAAATGA+AGG - chr5.4:75548387-75548406 None:intergenic 25.0%
! AGGTATACTTAAGAAAAGAA+AGG + chr5.4:75547484-75547503 MS.gene020830:CDS 25.0%
! ATCAAAACAAATATAAGTGC+AGG - chr5.4:75545464-75545483 None:intergenic 25.0%
! CTATGTATTTCCATTTGAAA+AGG + chr5.4:75547464-75547483 MS.gene020830:CDS 25.0%
! CTATTAACAACAAAAACAAC+AGG - chr5.4:75547763-75547782 None:intergenic 25.0%
! GAGATGAATCTTTAACATTT+CGG - chr5.4:75548023-75548042 None:intergenic 25.0%
! GTTAAGAATATATCTGAATC+TGG - chr5.4:75545386-75545405 None:intergenic 25.0%
! TAGCATTCAAAATGATTTGA+TGG + chr5.4:75545500-75545519 MS.gene020830:intron 25.0%
! TCATCTTTCAAAATATCTTG+TGG - chr5.4:75546804-75546823 None:intergenic 25.0%
! TCTTATAAAGAATGGTGAAT+TGG - chr5.4:75547084-75547103 None:intergenic 25.0%
! TTTGATACTGTAAACTTGAA+AGG + chr5.4:75548390-75548409 MS.gene020830:CDS 25.0%
!! ACTCAAGTATAAAGACATTT+TGG + chr5.4:75546958-75546977 MS.gene020830:CDS 25.0%
!! CTTAAGTATACCTTTTCAAA+TGG - chr5.4:75547477-75547496 None:intergenic 25.0%
!! TGATTCTCTTCTTTTTCTTT+CGG - chr5.4:75546986-75547005 None:intergenic 25.0%
!! TGTTCTACATTTGCATATTT+TGG + chr5.4:75547415-75547434 MS.gene020830:CDS 25.0%
!!! ATGTAAAGATAGTTTTGGTT+TGG - chr5.4:75548076-75548095 None:intergenic 25.0%
!!! CTGTTGTTTTTGTTGTTAAT+AGG + chr5.4:75547761-75547780 MS.gene020830:intron 25.0%
!!! GTTGTTTTTGTTGTTAATAG+GGG + chr5.4:75547763-75547782 MS.gene020830:intron 25.0%
!!! GTTTTTAAGTATCGTCTTTT+TGG - chr5.4:75548201-75548220 None:intergenic 25.0%
!!! TTGTTTTTGTTGTTAATAGG+GGG + chr5.4:75547764-75547783 MS.gene020830:intron 25.0%
AAACATGTTAAAGATTCTGC+TGG - chr5.4:75546619-75546638 None:intergenic 30.0%
AAACTTCTTCTGATATCAGA+AGG + chr5.4:75546642-75546661 MS.gene020830:CDS 30.0%
AACATATAGAGCAAGATTCA+AGG + chr5.4:75547105-75547124 MS.gene020830:CDS 30.0%
AAGACTCAGAACATGTTAAA+GGG + chr5.4:75547702-75547721 MS.gene020830:intron 30.0%
AAGAGTTGAGAATACTATCA+AGG + chr5.4:75546172-75546191 MS.gene020830:CDS 30.0%
ACAATAAGCATGAAAACAGT+AGG - chr5.4:75547585-75547604 None:intergenic 30.0%
ATACTTAACCGTTACAAGTT+TGG + chr5.4:75547987-75548006 MS.gene020830:intron 30.0%
CATTAGGAACAAAACAATGT+CGG - chr5.4:75545578-75545597 None:intergenic 30.0%
CTTATGTTATTCCTTCTTAC+AGG + chr5.4:75547852-75547871 MS.gene020830:CDS 30.0%
GAAAAAGAAGAGAATCATAG+AGG + chr5.4:75546989-75547008 MS.gene020830:CDS 30.0%
GCAAAACTGAAAATAACGTA+AGG - chr5.4:75547650-75547669 None:intergenic 30.0%
GTTACAAATCCAATCCTATA+AGG - chr5.4:75546050-75546069 None:intergenic 30.0%
TACATGTCATTCATGTACTA+TGG + chr5.4:75548273-75548292 MS.gene020830:CDS 30.0%
TGTAAAGACAATGATGTCAA+AGG + chr5.4:75545717-75545736 MS.gene020830:CDS 30.0%
TGTAACGGTTAAGTATAGTT+CGG - chr5.4:75547983-75548002 None:intergenic 30.0%
TTACAGATTCGAGAATAAAG+TGG - chr5.4:75545422-75545441 None:intergenic 30.0%
TTGACATCATTGTCTTTACA+GGG - chr5.4:75545717-75545736 None:intergenic 30.0%
TTGGAATTGCACTTCTATTA+GGG + chr5.4:75547161-75547180 MS.gene020830:CDS 30.0%
TTTATGCTACCTTATAGGAT+TGG + chr5.4:75546038-75546057 MS.gene020830:intron 30.0%
TTTCTTCAACTGTAAGTTGT+GGG - chr5.4:75546091-75546110 None:intergenic 30.0%
TTTGACATCATTGTCTTTAC+AGG - chr5.4:75545718-75545737 None:intergenic 30.0%
! AATACTTTTGAATTGCCCTT+AGG + chr5.4:75546557-75546576 MS.gene020830:intron 30.0%
! AGTAACCATTGACTAATTTC+TGG + chr5.4:75547377-75547396 MS.gene020830:intron 30.0%
! ATAGCTAGTTGAAGATGTTT+TGG - chr5.4:75547025-75547044 None:intergenic 30.0%
! CAGTTTTACCAAACTTGTAA+CGG - chr5.4:75547998-75548017 None:intergenic 30.0%
! CTTCTAAAAGTGCAATATTC+AGG + chr5.4:75548306-75548325 MS.gene020830:CDS 30.0%
! GGTTTGAGTCATCTAATTTT+TGG - chr5.4:75545269-75545288 None:intergenic 30.0%
! TGGACATCTTCATGTATTTT+TGG + chr5.4:75547435-75547454 MS.gene020830:CDS 30.0%
! TGTCATTTATGCTACCTTAT+AGG + chr5.4:75546033-75546052 MS.gene020830:intron 30.0%
!! GATCTGAACATTTTAAGTCA+TGG + chr5.4:75547260-75547279 MS.gene020830:intron 30.0%
!! TGAACATTTTAAGTCATGGA+GGG + chr5.4:75547264-75547283 MS.gene020830:intron 30.0%
!! TTTAACCTTCTTTTAAGAGC+AGG - chr5.4:75545943-75545962 None:intergenic 30.0%
!!! AAAGATAGTTTTGGTTTGGT+AGG - chr5.4:75548072-75548091 None:intergenic 30.0%
!!! ACAATTTTAAAGGGTATCAC+AGG + chr5.4:75545781-75545800 MS.gene020830:CDS 30.0%
AAACTTCTTCTCACTCTTCA+AGG + chr5.4:75546466-75546485 MS.gene020830:CDS 35.0%
AAGAATTCTGCTGGATTCAT+TGG - chr5.4:75546741-75546760 None:intergenic 35.0%
AAGAATTTCATAGCCTATGC+TGG - chr5.4:75546383-75546402 None:intergenic 35.0%
AAGGCTCTCCTGTTTATTAT+GGG + chr5.4:75546661-75546680 MS.gene020830:CDS 35.0%
ACAACCTTGTTAAGAGTTGT+AGG + chr5.4:75545859-75545878 MS.gene020830:CDS 35.0%
ACATACCAAAGTTCATGCAA+TGG + chr5.4:75548244-75548263 MS.gene020830:CDS 35.0%
ACATCTTCAACTAGCTATTC+AGG + chr5.4:75547027-75547046 MS.gene020830:CDS 35.0%
ACTAGCTATTCAGGTCAAAA+AGG + chr5.4:75547036-75547055 MS.gene020830:CDS 35.0%
AGGCATTACTATCACATACA+TGG + chr5.4:75546883-75546902 MS.gene020830:intron 35.0%
ATAGTCCTGCTCTTAAAAGA+AGG + chr5.4:75545935-75545954 MS.gene020830:CDS 35.0%
ATGACTCAAACCCTTACTTT+AGG + chr5.4:75545277-75545296 MS.gene020830:intron 35.0%
ATGTTAAAGATTCTGCTGGA+TGG - chr5.4:75546615-75546634 None:intergenic 35.0%
ATGTTATTCCTTCTTACAGG+TGG + chr5.4:75547855-75547874 MS.gene020830:CDS 35.0%
ATTATAGTTCTTCCAGCCTA+AGG - chr5.4:75546576-75546595 None:intergenic 35.0%
ATTCAGTTTCCGATATCAAG+TGG - chr5.4:75545530-75545549 None:intergenic 35.0%
CAAGACTCAGAACATGTTAA+AGG + chr5.4:75547701-75547720 MS.gene020830:intron 35.0%
CATGCTTATTGTGTACTTCA+TGG + chr5.4:75547593-75547612 MS.gene020830:CDS 35.0%
CATTCATGTACTATGGATTC+AGG + chr5.4:75548280-75548299 MS.gene020830:CDS 35.0%
CGCTTTCACATTCATATAGT+TGG - chr5.4:75548335-75548354 None:intergenic 35.0%
CTATATGAATGTGAAAGCGA+AGG + chr5.4:75548336-75548355 MS.gene020830:CDS 35.0%
CTATTCAGGTCAAAAAGGAA+TGG + chr5.4:75547041-75547060 MS.gene020830:CDS 35.0%
CTGCAAGACAAATCAATTCA+AGG - chr5.4:75548223-75548242 None:intergenic 35.0%
CTTGGAATTGCACTTCTATT+AGG + chr5.4:75547160-75547179 MS.gene020830:CDS 35.0%
GAAATCTTCAACCAATACAG+AGG + chr5.4:75547195-75547214 MS.gene020830:CDS 35.0%
GAGAATACTATCAAGGATCT+AGG + chr5.4:75546179-75546198 MS.gene020830:CDS 35.0%
GATACTGTAAACTTGAAAGG+TGG + chr5.4:75548393-75548412 MS.gene020830:CDS 35.0%
GATTGGATTTGTAACACAAG+AGG + chr5.4:75546055-75546074 MS.gene020830:CDS 35.0%
GCAATTATCAGCACATCATT+AGG - chr5.4:75545594-75545613 None:intergenic 35.0%
GGATATCTCAAAGGAATATC+AGG + chr5.4:75546340-75546359 MS.gene020830:CDS 35.0%
GTTTCTTCAACTGTAAGTTG+TGG - chr5.4:75546092-75546111 None:intergenic 35.0%
TAAAGATTCATCTCGAACCT+AGG + chr5.4:75548029-75548048 MS.gene020830:intron 35.0%
TATCTCAAAGGAATATCAGG+AGG + chr5.4:75546343-75546362 MS.gene020830:CDS 35.0%
TCACTACCTTGAGATATACA+GGG - chr5.4:75545140-75545159 None:intergenic 35.0%
TCATCAAGTAGTAGCAATGA+AGG - chr5.4:75546412-75546431 None:intergenic 35.0%
TCTCTGAATACCTATTGTGA+AGG - chr5.4:75545071-75545090 None:intergenic 35.0%
TGATCTTCTCTGCATTCTTA+AGG + chr5.4:75546114-75546133 MS.gene020830:CDS 35.0%
TTATAGTTCTTCCAGCCTAA+GGG - chr5.4:75546575-75546594 None:intergenic 35.0%
TTCAACCATTGCATGAACTT+TGG - chr5.4:75548252-75548271 None:intergenic 35.0%
TTCACTACCTTGAGATATAC+AGG - chr5.4:75545141-75545160 None:intergenic 35.0%
TTCTCTTAGCTCGAGAATTA+AGG + chr5.4:75545205-75545224 MS.gene020830:intron 35.0%
! CATTGTCTTTACAGGGTTTT+TGG - chr5.4:75545710-75545729 None:intergenic 35.0%
! TTTTTCTTGCTTGCTCATGT+TGG - chr5.4:75546147-75546166 None:intergenic 35.0%
!! AACATTTTAAGTCATGGAGG+GGG + chr5.4:75547266-75547285 MS.gene020830:intron 35.0%
!! CTGAACATTTTAAGTCATGG+AGG + chr5.4:75547263-75547282 MS.gene020830:intron 35.0%
!! CTTTTAAGAGCAGGACTATA+TGG - chr5.4:75545934-75545953 None:intergenic 35.0%
!! GAACATTTTAAGTCATGGAG+GGG + chr5.4:75547265-75547284 MS.gene020830:intron 35.0%
AAAAGGAATGGACAGTGAGT+TGG + chr5.4:75547053-75547072 MS.gene020830:CDS 40.0%
AAACATGGAGGCCTAAAGTA+AGG - chr5.4:75545291-75545310 None:intergenic 40.0%
AACATGGAGGCCTAAAGTAA+GGG - chr5.4:75545290-75545309 None:intergenic 40.0%
AAGGAATATCAGGAGGAGAA+AGG + chr5.4:75546350-75546369 MS.gene020830:CDS 40.0%
AAGGTGGCTTAAGTGAAGTT+TGG + chr5.4:75548409-75548428 MS.gene020830:CDS 40.0%
AAGTCAAGCAAGAATTCTGC+TGG - chr5.4:75546750-75546769 None:intergenic 40.0%
ACCTTAATAATCGCCACTGA+AGG - chr5.4:75546840-75546859 None:intergenic 40.0%
ACCTTGTTAAGAGTTGTAGG+AGG + chr5.4:75545862-75545881 MS.gene020830:CDS 40.0%
AGATGTCGCCACACAAAAAT+AGG + chr5.4:75546313-75546332 MS.gene020830:intron 40.0%
AGCAGAATTCTTGCTTGACT+TGG + chr5.4:75546749-75546768 MS.gene020830:CDS 40.0%
AGGTACTACTAGGTAGTTTC+AGG + chr5.4:75547233-75547252 MS.gene020830:intron 40.0%
AGTTTGGATTCTGATAGCCA+TGG + chr5.4:75548425-75548444 MS.gene020830:CDS 40.0%
ATAGGTGGAGGATATCTCAA+AGG + chr5.4:75546331-75546350 MS.gene020830:CDS 40.0%
ATCAAAGCAAGAATTTCGCC+GGG - chr5.4:75545817-75545836 None:intergenic 40.0%
ATGAATGTGAAAGCGAAGGA+GGG + chr5.4:75548340-75548359 MS.gene020830:CDS 40.0%
CACTTCTATTAGGGCTACTT+TGG + chr5.4:75547170-75547189 MS.gene020830:CDS 40.0%
CAGCATAGAATTCATGTCTC+AGG + chr5.4:75545041-75545060 MS.gene020830:CDS 40.0%
CAGTGGCGATTATTAAGGTA+GGG + chr5.4:75546841-75546860 MS.gene020830:intron 40.0%
CATCAAAGCAAGAATTTCGC+CGG - chr5.4:75545818-75545837 None:intergenic 40.0%
CCTTAATAATCGCCACTGAA+GGG - chr5.4:75546839-75546858 None:intergenic 40.0%
CTCTCCTGTTTATTATGGGA+AGG + chr5.4:75546665-75546684 MS.gene020830:CDS 40.0%
CTGCACCAGAAATTAGTCAA+TGG - chr5.4:75547385-75547404 None:intergenic 40.0%
CTGGATTCATTGGTATTTCC+GGG - chr5.4:75546731-75546750 None:intergenic 40.0%
CTTATTGTGTACTTCATGGC+TGG + chr5.4:75547597-75547616 MS.gene020830:CDS 40.0%
GAAGGCTCTCCTGTTTATTA+TGG + chr5.4:75546660-75546679 MS.gene020830:CDS 40.0%
GATGGATGACCACTTGATAT+CGG + chr5.4:75545518-75545537 MS.gene020830:intron 40.0%
GCTGGATTCATTGGTATTTC+CGG - chr5.4:75546732-75546751 None:intergenic 40.0%
GGCGAAATTCTTGCTTTGAT+GGG + chr5.4:75545817-75545836 MS.gene020830:CDS 40.0%
GGTACTACTAGGTAGTTTCA+GGG + chr5.4:75547234-75547253 MS.gene020830:intron 40.0%
GTTATGAGCATTCAAAGAGC+AGG + chr5.4:75547810-75547829 MS.gene020830:CDS 40.0%
TACCTAGTAGTACCTGATCT+CGG - chr5.4:75547228-75547247 None:intergenic 40.0%
TATGAATGTGAAAGCGAAGG+AGG + chr5.4:75548339-75548358 MS.gene020830:CDS 40.0%
TCAGTGGCGATTATTAAGGT+AGG + chr5.4:75546840-75546859 MS.gene020830:intron 40.0%
TCCTCCTACAACTCTTAACA+AGG - chr5.4:75545866-75545885 None:intergenic 40.0%
! AAGAAGTTTGTTTGCTGAGG+TGG - chr5.4:75546455-75546474 None:intergenic 40.0%
! CTAGCCTTCCCATAATAAAC+AGG - chr5.4:75546672-75546691 None:intergenic 40.0%
! GAGAAGAAGTTTGTTTGCTG+AGG - chr5.4:75546458-75546477 None:intergenic 40.0%
! TTCTATTAGGGCTACTTTGG+TGG + chr5.4:75547173-75547192 MS.gene020830:CDS 40.0%
! TTGAGATTGGTTCAAGCACT+TGG + chr5.4:75547142-75547161 MS.gene020830:CDS 40.0%
! TTTTTGTGTGGCGACATCTA+TGG - chr5.4:75546312-75546331 None:intergenic 40.0%
!! AGAGATTGACATTCGAGTTG+AGG + chr5.4:75545086-75545105 MS.gene020830:CDS 40.0%
!! CATTGACTAATTTCTGGTGC+AGG + chr5.4:75547383-75547402 MS.gene020830:intron 40.0%
!!! ATCCTCCACCTATTTTTGTG+TGG - chr5.4:75546324-75546343 None:intergenic 40.0%
!!! TTTTGTTGTTAATAGGGGGC+AGG + chr5.4:75547768-75547787 MS.gene020830:intron 40.0%
AAAGCTTCCTGCAATCTGCA+TGG - chr5.4:75545016-75545035 None:intergenic 45.0%
AAGCAGCACTCTATGTGACA+TGG + chr5.4:75547542-75547561 MS.gene020830:CDS 45.0%
ACCTTGAGATATACAGGGAG+AGG - chr5.4:75545135-75545154 None:intergenic 45.0%
ATCTGCATGGAACCAACAGA+TGG - chr5.4:75545003-75545022 None:intergenic 45.0%
ATGCAGATTGCAGGAAGCTT+TGG + chr5.4:75545015-75545034 MS.gene020830:CDS 45.0%
CAATAGAGTCGAGTGTCTTC+AGG + chr5.4:75545237-75545256 MS.gene020830:intron 45.0%
CATAGTAGCCACCTGTAAGA+AGG - chr5.4:75547866-75547885 None:intergenic 45.0%
CCCTTCAGTGGCGATTATTA+AGG + chr5.4:75546836-75546855 MS.gene020830:CDS 45.0%
CCTTGAGATATACAGGGAGA+GGG - chr5.4:75545134-75545153 None:intergenic 45.0%
CGGCGAAATTCTTGCTTTGA+TGG + chr5.4:75545816-75545835 MS.gene020830:CDS 45.0%
CTACTAGGTAGTTTCAGGGA+CGG + chr5.4:75547238-75547257 MS.gene020830:intron 45.0%
CTACTTGATGAGCCAACTTC+AGG + chr5.4:75546421-75546440 MS.gene020830:CDS 45.0%
CTCAGGCATACCTTCACAAT+AGG + chr5.4:75545058-75545077 MS.gene020830:CDS 45.0%
CTTGAGATATACAGGGAGAG+GGG - chr5.4:75545133-75545152 None:intergenic 45.0%
GAAAGGAAGAGAACCAGCAT+AGG + chr5.4:75546367-75546386 MS.gene020830:CDS 45.0%
GAGCATTCAAAGAGCAGGAA+TGG + chr5.4:75547815-75547834 MS.gene020830:CDS 45.0%
GCTACTTCTTTGTGCATACC+TGG - chr5.4:75547890-75547909 None:intergenic 45.0%
GTGGAATCAAGACCTGAAGT+TGG - chr5.4:75546436-75546455 None:intergenic 45.0%
GTTGTCTTTCCACTACCAGA+AGG - chr5.4:75545844-75545863 None:intergenic 45.0%
GTTTGGTAGGACAACTGAAC+TGG - chr5.4:75548059-75548078 None:intergenic 45.0%
TAAAGATTCTGCTGGATGGC+TGG - chr5.4:75546611-75546630 None:intergenic 45.0%
TAGCCATGGCTCTTTGCTTT+CGG + chr5.4:75548439-75548458 MS.gene020830:CDS 45.0%
TCAAAGCAAGAATTTCGCCG+GGG - chr5.4:75545816-75545835 None:intergenic 45.0%
TCAAGGATCTAGGCCTAGAA+AGG + chr5.4:75546189-75546208 MS.gene020830:CDS 45.0%
TCAATGTCACCTCCATCTGT+TGG + chr5.4:75544988-75545007 MS.gene020830:CDS 45.0%
TCTTGCTTGCTCATGTTGGT+TGG - chr5.4:75546143-75546162 None:intergenic 45.0%
TGCTAGACACACACCTTTCT+AGG - chr5.4:75546205-75546224 None:intergenic 45.0%
TGGAGGTGACATTGACATGT+TGG - chr5.4:75544983-75545002 None:intergenic 45.0%
TGTCGCCACACAAAAATAGG+TGG + chr5.4:75546316-75546335 MS.gene020830:CDS 45.0%
TGTGAGAGAGGATGAGATTG+AGG + chr5.4:75544957-75544976 MS.gene020830:CDS 45.0%
TTCATCGCTCGGTTTAGGAA+GGG + chr5.4:75547954-75547973 MS.gene020830:intron 45.0%
TTGAGATATACAGGGAGAGG+GGG - chr5.4:75545132-75545151 None:intergenic 45.0%
! AGAAAGGTGTGTGTCTAGCA+TGG + chr5.4:75546205-75546224 MS.gene020830:intron 45.0%
! CACTCTTCAAGGACTAGCAA+AGG + chr5.4:75546477-75546496 MS.gene020830:CDS 45.0%
! CTTTTGAATTGCCCTTAGGC+TGG + chr5.4:75546561-75546580 MS.gene020830:intron 45.0%
! TTTGTGGACTGTTCATCGCT+CGG + chr5.4:75547943-75547962 MS.gene020830:intron 45.0%
!! AAGGGTATCACAGGAAGCAT+TGG + chr5.4:75545790-75545809 MS.gene020830:CDS 45.0%
!! CAGGGTTTTTGGAAGCTGTT+TGG - chr5.4:75545699-75545718 None:intergenic 45.0%
!! CGGAGTACTTTTCATCCTTG+AGG + chr5.4:75546700-75546719 MS.gene020830:CDS 45.0%
!! GACTAATTTCTGGTGCAGGT+TGG + chr5.4:75547387-75547406 MS.gene020830:intron 45.0%
!! TTCTTGCTTGACTTGGCAAC+TGG + chr5.4:75546756-75546775 MS.gene020830:CDS 45.0%
ACAACTGAACTGGTGCACCT+AGG - chr5.4:75548049-75548068 None:intergenic 50.0%
AGAATCCACTGACCCTTCAG+TGG + chr5.4:75546824-75546843 MS.gene020830:CDS 50.0%
AGGGGGATCTTGGTTGAAAC+TGG - chr5.4:75545115-75545134 None:intergenic 50.0%
CAGCACTCTATGTGACATGG+TGG + chr5.4:75547545-75547564 MS.gene020830:CDS 50.0%
CCCTCTCCCTGTATATCTCA+AGG + chr5.4:75545131-75545150 MS.gene020830:CDS 50.0%
CGCCACACAAAAATAGGTGG+AGG + chr5.4:75546319-75546338 MS.gene020830:CDS 50.0%
CTCCGAGATCAGGTACTACT+AGG + chr5.4:75547223-75547242 MS.gene020830:intron 50.0%
GAACCGAAAGCAAAGAGCCA+TGG - chr5.4:75548445-75548464 None:intergenic 50.0%
GACTGTTCATCGCTCGGTTT+AGG + chr5.4:75547949-75547968 MS.gene020830:intron 50.0%
GAGTCGAGTGTCTTCAGGAT+TGG + chr5.4:75545242-75545261 MS.gene020830:intron 50.0%
GGCTCTTTGCTTTCGGTTCT+TGG + chr5.4:75548446-75548465 MS.gene020830:CDS 50.0%
GTTCATCGCTCGGTTTAGGA+AGG + chr5.4:75547953-75547972 MS.gene020830:intron 50.0%
TACAGGTGGCTACTATGTCC+AGG + chr5.4:75547869-75547888 MS.gene020830:CDS 50.0%
TAGGGGGCAGGAGAACTATT+TGG + chr5.4:75547780-75547799 MS.gene020830:intron 50.0%
TATTTCCGGGACGAACCTCA+AGG - chr5.4:75546718-75546737 None:intergenic 50.0%
TCGGAGTTGAGCCTCTGTAT+TGG - chr5.4:75547209-75547228 None:intergenic 50.0%
TGCATGGAACCAACAGATGG+AGG - chr5.4:75545000-75545019 None:intergenic 50.0%
TTCATCCTTGAGGTTCGTCC+CGG + chr5.4:75546710-75546729 MS.gene020830:CDS 50.0%
! CTTGCTTTGATGGGTCCTTC+TGG + chr5.4:75545826-75545845 MS.gene020830:CDS 50.0%
! GTTGGTTCCATGCAGATTGC+AGG + chr5.4:75545006-75545025 MS.gene020830:CDS 50.0%
! TTGATGGGTCCTTCTGGTAG+TGG + chr5.4:75545832-75545851 MS.gene020830:CDS 50.0%
AATCGCCACTGAAGGGTCAG+TGG - chr5.4:75546832-75546851 None:intergenic 55.0%
AGAGGCTCAACTCCGAGATC+AGG + chr5.4:75547213-75547232 MS.gene020830:CDS 55.0%
ATACAGGGAGAGGGGGATCT+TGG - chr5.4:75545125-75545144 None:intergenic 55.0%
TGGGAAGGCTAGAGACACAG+CGG + chr5.4:75546680-75546699 MS.gene020830:CDS 55.0%
!! ATCACAGGAAGCATTGGCCC+CGG + chr5.4:75545796-75545815 MS.gene020830:CDS 55.0%
!! GGCTGGCTTTAAGAGCACTG+CGG + chr5.4:75547614-75547633 MS.gene020830:CDS 55.0%
! GTGAAAGCGAAGGAGGGTGC+AGG + chr5.4:75548346-75548365 MS.gene020830:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 75544949 75548503 75544949 ID=MS.gene020830
chr5.4 mRNA 75544949 75548503 75544949 ID=MS.gene020830.t1;Parent=MS.gene020830
chr5.4 exon 75544949 75545152 75544949 ID=MS.gene020830.t1.exon1;Parent=MS.gene020830.t1
chr5.4 CDS 75544949 75545152 75544949 ID=cds.MS.gene020830.t1;Parent=MS.gene020830.t1
chr5.4 exon 75545664 75545956 75545664 ID=MS.gene020830.t1.exon2;Parent=MS.gene020830.t1
chr5.4 CDS 75545664 75545956 75545664 ID=cds.MS.gene020830.t1;Parent=MS.gene020830.t1
chr5.4 exon 75546055 75546210 75546055 ID=MS.gene020830.t1.exon3;Parent=MS.gene020830.t1
chr5.4 CDS 75546055 75546210 75546055 ID=cds.MS.gene020830.t1;Parent=MS.gene020830.t1
chr5.4 exon 75546315 75546498 75546315 ID=MS.gene020830.t1.exon4;Parent=MS.gene020830.t1
chr5.4 CDS 75546315 75546498 75546315 ID=cds.MS.gene020830.t1;Parent=MS.gene020830.t1
chr5.4 exon 75546579 75546857 75546579 ID=MS.gene020830.t1.exon5;Parent=MS.gene020830.t1
chr5.4 CDS 75546579 75546857 75546579 ID=cds.MS.gene020830.t1;Parent=MS.gene020830.t1
chr5.4 exon 75546950 75547234 75546950 ID=MS.gene020830.t1.exon6;Parent=MS.gene020830.t1
chr5.4 CDS 75546950 75547234 75546950 ID=cds.MS.gene020830.t1;Parent=MS.gene020830.t1
chr5.4 exon 75547405 75547689 75547405 ID=MS.gene020830.t1.exon7;Parent=MS.gene020830.t1
chr5.4 CDS 75547405 75547689 75547405 ID=cds.MS.gene020830.t1;Parent=MS.gene020830.t1
chr5.4 exon 75547783 75547890 75547783 ID=MS.gene020830.t1.exon8;Parent=MS.gene020830.t1
chr5.4 CDS 75547783 75547890 75547783 ID=cds.MS.gene020830.t1;Parent=MS.gene020830.t1
chr5.4 exon 75548243 75548503 75548243 ID=MS.gene020830.t1.exon9;Parent=MS.gene020830.t1
chr5.4 CDS 75548243 75548503 75548243 ID=cds.MS.gene020830.t1;Parent=MS.gene020830.t1
Gene Sequence

>MS.gene020830

ATGGAAAATGTGAGAGAGGATGAGATTGAGGCCAACATGTCAATGTCACCTCCATCTGTTGGTTCCATGCAGATTGCAGGAAGCTTTGGTCACAGCATAGAATTCATGTCTCAGGCATACCTTCACAATAGGTATTCAGAGATTGACATTCGAGTTGAGGAATCCAGTTTCAACCAAGATCCCCCTCTCCCTGTATATCTCAAGGTAGTGAACAATTAGAGCAAAATATTAATTTTATCAGAAATCAAAGTTCTTTTTCTCTTAGCTCGAGAATTAAGGTTCTTCGTGCAATAGAGTCGAGTGTCTTCAGGATTGGTCCAAAAATTAGATGACTCAAACCCTTACTTTAGGCCTCCATGTTTTTCTTTAAACTTTAAAGATATATGTTAAATTAGATAAATCTGAGGATTTGTGAATTTGAGAAAAAGTATTAACCAGATTCAGATATATTCTTAACATGATTTTATTTTCCACTTTATTCTCGAATCTGTAAGTACTTAAATGACATTATACCTGCACTTATATTTGTTTTGATTTTTCAAAACTCCTTTTAGCATTCAAAATGATTTGATGGATGACCACTTGATATCGGAAACTGAATTCAAGAGTCAATGAGAATATTATCACCGACATTGTTTTGTTCCTAATGATGTGCTGATAATTGCTTCACTTGATCACATTCTCAATAATAGACAATTTCTCATTTAATGTGCAGTTTGAAGATGTAGAGTTCAAAGTGAGAAATAGCCAAACAGCTTCCAAAAACCCTGTAAAGACAATGATGTCAAAGGTAGCAACACAACACCATGTAGAAGAAAATAACAAATACAAGACAATTTTAAAGGGTATCACAGGAAGCATTGGCCCCGGCGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGAAAGACAACCTTGTTAAGAGTTGTAGGAGGAAGATTACTTGATAATGTAAAGGGAAAGATATCTTACAATGATGTTCCATATAGTCCTGCTCTTAAAAGAAGGTTAAACATCTTGTTAGAACATCAGCATCTATGACTCAATGTGTGAATATGTGCTAACAATGTACTTTAATGTCTCTGTCATTTATGCTACCTTATAGGATTGGATTTGTAACACAAGAGGATGTTCTTTTCCCACAACTTACAGTTGAAGAAACATTGATCTTCTCTGCATTCTTAAGGCTACCAACCAACATGAGCAAGCAAGAAAAATATGCAAGAGTTGAGAATACTATCAAGGATCTAGGCCTAGAAAGGTGTGTGTCTAGCATGGATCAAAATTTGACGTAAAATATGATTATTGAATACTCAAATAAAGAAATTAAACTGTTTTGCTAAATAATCTTTTGTACAACCATAGATGTCGCCACACAAAAATAGGTGGAGGATATCTCAAAGGAATATCAGGAGGAGAAAGGAAGAGAACCAGCATAGGCTATGAAATTCTTGTTGAGCCTTCATTGCTACTACTTGATGAGCCAACTTCAGGTCTTGATTCCACCTCAGCAAACAAACTTCTTCTCACTCTTCAAGGACTAGCAAAGGTATCAGAAACTAAATTTAACTCTCATTTTGATAACATGTTTTGAACATATGCTGAAAAATACTTTTGAATTGCCCTTAGGCTGGAAGAACTATAATCACAACAATTCACCAGCCATCCAGCAGAATCTTTAACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTCTCCTGTTTATTATGGGAAGGCTAGAGACACAGCGGAGTACTTTTCATCCTTGAGGTTCGTCCCGGAAATACCAATGAATCCAGCAGAATTCTTGCTTGACTTGGCAACTGGACAAGTGAATGATATAAGTATTCCACAAGATATTTTGAAAGATGAAGAATCCACTGACCCTTCAGTGGCGATTATTAAGGTAGGGTTAATCGTAATTTATTTATAGGCATTACTATCACATACATGGTCTATTTCATTCTCAACTTAATAATTGTTTATTTATCATGTTAGTATCTACAACTCAAGTATAAAGACATTTTGGAGCCGAAAGAAAAAGAAGAGAATCATAGAGGAGCAAACACACCAAAACATCTTCAACTAGCTATTCAGGTCAAAAAGGAATGGACAGTGAGTTGGTTAGACCAATTCACCATTCTTTATAAGAGAACATATAGAGCAAGATTCAAGGAATATTTTGATATATTGAGATTGGTTCAAGCACTTGGAATTGCACTTCTATTAGGGCTACTTTGGTGGAAATCTTCAACCAATACAGAGGCTCAACTCCGAGATCAGGTACTACTAGGTAGTTTCAGGGACGGATCTGAACATTTTAAGTCATGGAGGGGGCAATTTACATATAAATTTATAGCATATATATCATTTTTAAAAAACATAAATATGCATCATAATTGTTCTAAACAATTTTGAAATTTTCAGTAACCATTGACTAATTTCTGGTGCAGGTTGGTTTAATGTTCTACATTTGCATATTTTGGACATCTTCATGTATTTTTGGAGCAGTCTATGTATTTCCATTTGAAAAGGTATACTTAAGAAAAGAAAGGAAAGCAGATATGTATAGACTTAGTGTGTACTATGCAAGCAGCACTCTATGTGACATGGTGGCACATGTTTTGTATCCTACTGTTTTCATGCTTATTGTGTACTTCATGGCTGGCTTTAAGAGCACTGCGGCTTGCTTCTTCCTTACGTTATTTTCAGTTTTGCTAATTGCTATCACAAGTCAAGTAAGTTATGTCAAGACTCAGAACATGTTAAAGGGTAATAATTTGTTTAAAAGTAGCTCTAATGAATATCCCTGTTGTTTTTGTTGTTAATAGGGGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGAATGGTTGCTTCTTTGATACTTATGTTATTCCTTCTTACAGGTGGCTACTATGTCCAGGTATGCACAAAGAAGTAGCAAGTAGAAGCAATGCTAGTTAAACATATATATCTTTGTGGACTGTTCATCGCTCGGTTTAGGAAGGGAAACCGAACTATACTTAACCGTTACAAGTTTGGTAAAACTGAACCGAAATGTTAAAGATTCATCTCGAACCTAGGTGCACCAGTTCAGTTGTCCTACCAAACCAAAACTATCTTTACATAAAACTGAATTATACAAATTAGGATTGTTATAAAAACAAAAACTTAACCAAACCAAATATTATGACTATTAAAAAAATCAAAAATTGCACTGTTAAACTAAACCAAAAAGACGATACTTAAAAACCTTGAATTGATTTGTCTTGCAGCACATACCAAAGTTCATGCAATGGTTGAAGTACATGTCATTCATGTACTATGGATTCAGGCTTCTTCTAAAAGTGCAATATTCAGGAGACCAACTATATGAATGTGAAAGCGAAGGAGGGTGCAGGACACTTCAAAGTTCACCTTCATTTGATACTGTAAACTTGAAAGGTGGCTTAAGTGAAGTTTGGATTCTGATAGCCATGGCTCTTTGCTTTCGGTTCTTGGCTTACTTTTGTCTACGCAGAAAGATTGATGTATGA
Protein sequence

>MS.gene020830.t1

MENVREDEIEANMSMSPPSVGSMQIAGSFGHSIEFMSQAYLHNRYSEIDIRVEESSFNQDPPLPVYLKFEDVEFKVRNSQTASKNPVKTMMSKVATQHHVEENNKYKTILKGITGSIGPGEILALMGPSGSGKTTLLRVVGGRLLDNVKGKISYNDVPYSPALKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPTNMSKQEKYARVENTIKDLGLERCRHTKIGGGYLKGISGGERKRTSIGYEILVEPSLLLLDEPTSGLDSTSANKLLLTLQGLAKAGRTIITTIHQPSSRIFNMFDKLLLISEGSPVYYGKARDTAEYFSSLRFVPEIPMNPAEFLLDLATGQVNDISIPQDILKDEESTDPSVAIIKYLQLKYKDILEPKEKEENHRGANTPKHLQLAIQVKKEWTVSWLDQFTILYKRTYRARFKEYFDILRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLRKERKADMYRLSVYYASSTLCDMVAHVLYPTVFMLIVYFMAGFKSTAACFFLTLFSVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYMSFMYYGFRLLLKVQYSGDQLYECESEGGCRTLQSSPSFDTVNLKGGLSEVWILIAMALCFRFLAYFCLRRKIDV