Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02104.t1 | XP_013463012.1 | 84.6 | 857 | 132 | 0 | 1 | 857 | 1 | 857 | 0.00E+00 | 1329.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02104.t1 | Q5BQN5 | 34.8 | 848 | 501 | 13 | 23 | 837 | 1 | 829 | 3.6e-112 | 407.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02104.t1 | A0A072V5F1 | 84.6 | 857 | 132 | 0 | 1 | 857 | 1 | 857 | 0.0e+00 | 1329.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene02104 | MS.gene83407 | PPI |
MS.gene02104 | MS.gene056552 | PPI |
MS.gene02104 | MS.gene82956 | PPI |
MS.gene02104 | MS.gene024274 | PPI |
MS.gene02104 | MS.gene065388 | PPI |
MS.gene02104 | MS.gene065404 | PPI |
MS.gene02104 | MS.gene033707 | PPI |
MS.gene54948 | MS.gene02104 | PPI |
MS.gene02104 | MS.gene067982 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02104.t1 | MTR_2g030300 | 92.649 | 857 | 63 | 0 | 1 | 857 | 1 | 857 | 0.0 | 1569 |
MS.gene02104.t1 | MTR_2g030300 | 92.363 | 838 | 64 | 0 | 2 | 839 | 1 | 838 | 0.0 | 1533 |
MS.gene02104.t1 | MTR_6g060178 | 36.792 | 106 | 67 | 0 | 746 | 851 | 820 | 925 | 8.94e-15 | 79.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02104.t1 | AT2G34730 | 33.871 | 868 | 472 | 20 | 18 | 855 | 27 | 822 | 2.52e-116 | 374 |
MS.gene02104.t1 | AT2G34730 | 32.529 | 870 | 481 | 22 | 18 | 855 | 27 | 822 | 2.52e-103 | 339 |
Find 144 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAACCATTGTCAACAATTTA+TGG | 0.126794 | 2.2:+57749710 | None:intergenic |
CTCAAGTTTGCGTCAGGATT+TGG | 0.210354 | 2.2:-57751126 | MS.gene02104:CDS |
AGACAGATTGTCAACAAAAT+TGG | 0.211709 | 2.2:-57749987 | MS.gene02104:CDS |
GCTTCAACTTTGGAAGAAAA+TGG | 0.221430 | 2.2:-57750966 | MS.gene02104:CDS |
CAATTTATGGATGAGATTAA+TGG | 0.223360 | 2.2:+57749723 | None:intergenic |
TTTGCAGATTATCGAGATTC+TGG | 0.246664 | 2.2:-57746688 | MS.gene02104:intron |
GGTTGACTCCATTTGTTTCC+TGG | 0.252838 | 2.2:+57749744 | None:intergenic |
GATTAGCAAGCCTGATAGTT+TGG | 0.261714 | 2.2:-57750925 | MS.gene02104:CDS |
ATCCGTAATTTCTATCCTTC+TGG | 0.262986 | 2.2:+57751325 | None:intergenic |
TCGACATAAATCCATCTTTC+CGG | 0.263621 | 2.2:+57751389 | None:intergenic |
AACTTGAGATCTCTTTATAT+TGG | 0.270030 | 2.2:+57751141 | None:intergenic |
CCAGGGTAATGTTGCAATAT+TGG | 0.280911 | 2.2:+57747951 | None:intergenic |
TCTCATGCACTTGAGATTCA+TGG | 0.284608 | 2.2:+57750835 | None:intergenic |
GACAGTGCTCAAGTTTCTAA+TGG | 0.291876 | 2.2:-57750279 | MS.gene02104:CDS |
GGTGAGTGATTCTGTTATAA+AGG | 0.296011 | 2.2:-57751768 | MS.gene02104:CDS |
TGAAAGTCTGAAAGATACTA+TGG | 0.302610 | 2.2:-57751357 | MS.gene02104:CDS |
ATGAACGGTTGATTATTTCT+AGG | 0.307582 | 2.2:-57751793 | MS.gene02104:CDS |
TCATTTGTCGGCTTCAACTT+TGG | 0.307670 | 2.2:-57750976 | MS.gene02104:CDS |
TAAATGTCTCTTTAAAGATA+TGG | 0.335516 | 2.2:-57750391 | MS.gene02104:CDS |
CTCCAGAAGGATAGAAATTA+CGG | 0.338178 | 2.2:-57751327 | MS.gene02104:CDS |
GGTTCGGATTTGGTTGGTTT+AGG | 0.341544 | 2.2:-57751434 | MS.gene02104:CDS |
TTGCAGTTTCAAAGATAGAT+TGG | 0.343057 | 2.2:-57750622 | MS.gene02104:CDS |
ATTTAGTTCGGGTTCGGATT+TGG | 0.349008 | 2.2:-57751444 | MS.gene02104:CDS |
TTCTCAGCTTTCTGCTGCTA+TGG | 0.356688 | 2.2:-57750526 | MS.gene02104:CDS |
CATGCTAGCTGATAAGAATA+AGG | 0.365981 | 2.2:-57750565 | MS.gene02104:CDS |
TTCTGAGTGGCAGGAGGAGC+AGG | 0.380725 | 2.2:-57751279 | MS.gene02104:CDS |
TTCAACAAGAAGATTTAGTT+CGG | 0.381962 | 2.2:-57751456 | MS.gene02104:CDS |
GGAGGAGCAGGAGTTTCGTT+TGG | 0.387511 | 2.2:-57751267 | MS.gene02104:CDS |
CTTGTCTTTCTTCAATGAAA+AGG | 0.390403 | 2.2:+57750752 | None:intergenic |
AAGCCTGATAGTTTGGATTC+TGG | 0.395489 | 2.2:-57750918 | MS.gene02104:CDS |
GAAGACTTGCATCTCAAGTA+TGG | 0.396734 | 2.2:-57750345 | MS.gene02104:CDS |
GAGCCAGAATCCAAACTATC+AGG | 0.397077 | 2.2:+57750915 | None:intergenic |
AAATTGAATGAAGTCCTTGA+TGG | 0.397269 | 2.2:-57750687 | MS.gene02104:CDS |
TTTGTTGTTCTCGGCAGCTT+TGG | 0.397817 | 2.2:+57750146 | None:intergenic |
ATGATTGGTGTCATAATAAG+AGG | 0.398440 | 2.2:-57751031 | MS.gene02104:CDS |
AGAAAAGCAAAAGATGGAAT+TGG | 0.398443 | 2.2:-57750040 | MS.gene02104:CDS |
GCAGTTGAGCCAACTCAAAA+AGG | 0.400587 | 2.2:-57751504 | MS.gene02104:CDS |
AAGGAAATAAATAAAATTAG+AGG | 0.402549 | 2.2:-57751485 | MS.gene02104:CDS |
AACGACGTGTACCACCTTCA+TGG | 0.404579 | 2.2:+57751597 | None:intergenic |
ACAAGGGGTAACAGATGCTT+TGG | 0.408825 | 2.2:-57750067 | MS.gene02104:CDS |
GGTTAATGCTGTTGAGGAAC+AGG | 0.417685 | 2.2:-57751741 | MS.gene02104:CDS |
AAGAAGATTTAGTTCGGGTT+CGG | 0.417782 | 2.2:-57751450 | MS.gene02104:CDS |
TGGTAATTCGCAATTGTATC+CGG | 0.418357 | 2.2:-57751232 | MS.gene02104:CDS |
AATTATATTCAAAGGAGCTT+TGG | 0.419678 | 2.2:-57750193 | MS.gene02104:CDS |
TGAGCACATAATTGAGGAAA+TGG | 0.425175 | 2.2:-57751837 | MS.gene02104:CDS |
ATCGAGTCAATTATGATTGA+AGG | 0.426487 | 2.2:-57750234 | MS.gene02104:CDS |
CTTCAACTTTGGAAGAAAAT+GGG | 0.430798 | 2.2:-57750965 | MS.gene02104:CDS |
AAGTAGTTTATGTGTTGGTT+CGG | 0.436422 | 2.2:-57751663 | MS.gene02104:CDS |
GAGGGGTTTGTTGTTATGAA+TGG | 0.440791 | 2.2:-57751911 | MS.gene02104:CDS |
ACAGTGCTCAAGTTTCTAAT+GGG | 0.444042 | 2.2:-57750278 | MS.gene02104:CDS |
TGGTTTAGGTGGTATTCTGC+AGG | 0.444965 | 2.2:-57751420 | MS.gene02104:CDS |
AATTATGATTGAAGGGCTAC+TGG | 0.447637 | 2.2:-57750226 | MS.gene02104:CDS |
GCTTATTTCTCATGGATCCT+TGG | 0.447773 | 2.2:-57751063 | MS.gene02104:CDS |
GGGTTTGTTGTTATGAATGG+TGG | 0.454609 | 2.2:-57751908 | MS.gene02104:CDS |
AGAGATCTCAAGTTTGCGTC+AGG | 0.455688 | 2.2:-57751132 | MS.gene02104:CDS |
AGAAGCTTGAGGATGATGTT+GGG | 0.455998 | 2.2:-57750452 | MS.gene02104:CDS |
TGCTCAAGTTTCTAATGGGC+TGG | 0.456563 | 2.2:-57750274 | MS.gene02104:CDS |
TCGGATTTGGTTGGTTTAGG+TGG | 0.456606 | 2.2:-57751431 | MS.gene02104:CDS |
GTGAGTGATTCTGTTATAAA+GGG | 0.464197 | 2.2:-57751767 | MS.gene02104:CDS |
AAGCTAAGTAGTTTATGTGT+TGG | 0.468005 | 2.2:-57751668 | MS.gene02104:CDS |
TCAACAAGAAGATTTAGTTC+GGG | 0.472303 | 2.2:-57751455 | MS.gene02104:CDS |
GAAATCAACAGTGGAAGAAA+AGG | 0.472349 | 2.2:-57750100 | MS.gene02104:CDS |
GTGCAACGTATATCCTTTCA+AGG | 0.477481 | 2.2:+57747988 | None:intergenic |
GTTGCAATATTGGTGAATAA+TGG | 0.481974 | 2.2:+57747961 | None:intergenic |
TCTCAGCTTTCTGCTGCTAT+GGG | 0.484028 | 2.2:-57750525 | MS.gene02104:CDS |
AAGGGAAACCAGGAAACAAA+TGG | 0.491127 | 2.2:-57749752 | MS.gene02104:CDS |
GCAATTTCTCATTTCCATCA+AGG | 0.492086 | 2.2:+57750673 | None:intergenic |
GTGCACTGGCTTTGTTCTTG+AGG | 0.494154 | 2.2:+57749135 | None:intergenic |
TGATTCTGTTATAAAGGGTA+TGG | 0.496821 | 2.2:-57751762 | MS.gene02104:CDS |
TGTGGAGAACAGTAAAGAGT+TGG | 0.497087 | 2.2:-57749962 | MS.gene02104:CDS |
ACTGGGACGCTTATTTCTCA+TGG | 0.498313 | 2.2:-57751071 | MS.gene02104:CDS |
AACAACACTTTCTGAGTGGC+AGG | 0.500450 | 2.2:-57751288 | MS.gene02104:CDS |
GCTTTCGACAGATCATTTGT+CGG | 0.506401 | 2.2:-57750988 | MS.gene02104:CDS |
ACGACGTGTACCACCTTCAT+GGG | 0.509179 | 2.2:+57751598 | None:intergenic |
GTGTATTGAGGCAAAAGAAA+GGG | 0.510120 | 2.2:-57749770 | MS.gene02104:CDS |
ATTAATCAAATTATATTCAA+AGG | 0.512709 | 2.2:-57750201 | MS.gene02104:CDS |
AGCTAAAATGATGTGGTCTT+CGG | 0.514765 | 2.2:-57751636 | MS.gene02104:CDS |
CAATATTGCAACATTACCCT+GGG | 0.515679 | 2.2:-57747950 | MS.gene02104:CDS |
ATGTTTCAAGAAATTGTATG+AGG | 0.515816 | 2.2:-57749660 | MS.gene02104:intron |
CAGAAGCTTGAGGATGATGT+TGG | 0.516189 | 2.2:-57750453 | MS.gene02104:CDS |
TTTCCTTTGCTGCTGCAACT+AGG | 0.518273 | 2.2:+57749923 | None:intergenic |
GGAACAAGAAAAGCAAAAGA+TGG | 0.518661 | 2.2:-57750046 | MS.gene02104:CDS |
TGTTATGAATGGTGGTGAAA+AGG | 0.519449 | 2.2:-57751900 | MS.gene02104:CDS |
TACATGAAGATCTCGAACAA+AGG | 0.522789 | 2.2:-57749870 | MS.gene02104:CDS |
AGTTCGGGTTCGGATTTGGT+TGG | 0.524274 | 2.2:-57751440 | MS.gene02104:CDS |
CAATCTCCTGCTGCAAACTC+CGG | 0.526723 | 2.2:+57751213 | None:intergenic |
TTGTATCCGGAGTTTGCAGC+AGG | 0.528620 | 2.2:-57751219 | MS.gene02104:CDS |
ACATGAAGATCTCGAACAAA+GGG | 0.529153 | 2.2:-57749869 | MS.gene02104:CDS |
AGGAGAATGTGCCGGAAAGA+TGG | 0.531020 | 2.2:-57751400 | MS.gene02104:CDS |
CCTTGGAGCATACTGATGAT+TGG | 0.531339 | 2.2:-57751046 | MS.gene02104:CDS |
AGAAACTTGAGCACTGTCAA+TGG | 0.533247 | 2.2:+57750284 | None:intergenic |
ACGGTTGATTATTTCTAGGA+TGG | 0.533363 | 2.2:-57751789 | MS.gene02104:CDS |
AAAAGGAGAATTTATTACAA+GGG | 0.533806 | 2.2:-57750083 | MS.gene02104:CDS |
AGTGTATTGAGGCAAAAGAA+AGG | 0.534445 | 2.2:-57749771 | MS.gene02104:CDS |
TCGTTTGGAAATTGAGCGGA+TGG | 0.537346 | 2.2:-57751252 | MS.gene02104:CDS |
CTTGTAAGAAGAGAATTGAC+TGG | 0.539649 | 2.2:-57746663 | MS.gene02104:CDS |
TTTGGATTCTGGCTCTCTGA+AGG | 0.545981 | 2.2:-57750907 | MS.gene02104:CDS |
CCAATATTGCAACATTACCC+TGG | 0.549573 | 2.2:-57747951 | MS.gene02104:CDS |
CTATGGATTCTTTCTCCAGA+AGG | 0.549982 | 2.2:-57751340 | MS.gene02104:CDS |
GAAGTGGAAATGATGAAGGA+GGG | 0.552664 | 2.2:-57751929 | None:intergenic |
GGGTATGGTTAATGCTGTTG+AGG | 0.552686 | 2.2:-57751747 | MS.gene02104:CDS |
TAGGGAAGTGGAAATGATGA+AGG | 0.558275 | 2.2:-57751933 | None:intergenic |
AAAGGAGAATTTATTACAAG+GGG | 0.560840 | 2.2:-57750082 | MS.gene02104:CDS |
CTCTTCTTAGACTCCTTGAA+AGG | 0.561258 | 2.2:-57748001 | MS.gene02104:CDS |
TAACCTAGTTGCAGCAGCAA+AGG | 0.563546 | 2.2:-57749926 | MS.gene02104:CDS |
GAAAAGGAGAATTTATTACA+AGG | 0.565102 | 2.2:-57750084 | MS.gene02104:CDS |
GCCAGTGCACTTAAAACCAT+GGG | 0.568732 | 2.2:-57749122 | MS.gene02104:CDS |
ATCTGAGAATCTTCAACTGA+AGG | 0.576258 | 2.2:-57750589 | MS.gene02104:CDS |
TTGTCAACAAAATTGGATTG+TGG | 0.582697 | 2.2:-57749980 | MS.gene02104:CDS |
TCTTGGTGAGCACATAATTG+AGG | 0.583633 | 2.2:-57751843 | MS.gene02104:CDS |
CATCCATAAATTGTTGACAA+TGG | 0.586642 | 2.2:-57749713 | MS.gene02104:CDS |
TAAACTGTCAAGCTGTTGAG+AGG | 0.588332 | 2.2:+57750017 | None:intergenic |
CTATTGAATCTGAAAGAAAG+AGG | 0.588345 | 2.2:-57750780 | MS.gene02104:CDS |
TCGAGTCAATTATGATTGAA+GGG | 0.591000 | 2.2:-57750233 | MS.gene02104:CDS |
TCGAAAGCTTCAAGTGGACA+TGG | 0.594594 | 2.2:+57751003 | None:intergenic |
AAAGGAAATTGAAGAATACA+AGG | 0.596002 | 2.2:-57749908 | MS.gene02104:CDS |
AGCCAGTGCACTTAAAACCA+TGG | 0.598471 | 2.2:-57749123 | MS.gene02104:CDS |
AGATGCATTGAAGTGTATTG+AGG | 0.598964 | 2.2:-57749782 | MS.gene02104:CDS |
GGAAGTGGAAATGATGAAGG+AGG | 0.600066 | 2.2:-57751930 | None:intergenic |
TTGGAAGAAAATGGGAAGCA+CGG | 0.601297 | 2.2:-57750957 | MS.gene02104:CDS |
AGGCAAAAGAAAGGGAAACC+AGG | 0.604868 | 2.2:-57749762 | MS.gene02104:CDS |
ACAATCTGTTCAGAAGCTTG+AGG | 0.610988 | 2.2:-57750463 | MS.gene02104:CDS |
AGATAGATTTATGAAGCCTG+TGG | 0.611012 | 2.2:-57751552 | MS.gene02104:CDS |
AAGGATGATGATGAGAGTCT+TGG | 0.618836 | 2.2:-57751860 | MS.gene02104:CDS |
TATTCTGCAGGAGAATGTGC+CGG | 0.623360 | 2.2:-57751408 | MS.gene02104:CDS |
GATCTGTCGAAAGCTTCAAG+TGG | 0.625999 | 2.2:+57750997 | None:intergenic |
TCTTGCAAAGGCTGAAGCAG+AGG | 0.627303 | 2.2:-57749060 | MS.gene02104:intron |
GAAGCTTGAGGATGATGTTG+GGG | 0.628459 | 2.2:-57750451 | MS.gene02104:CDS |
CGTTGTAATGAAACCCATGA+AGG | 0.644493 | 2.2:-57751611 | MS.gene02104:CDS |
GATAGATTTATGAAGCCTGT+GGG | 0.646275 | 2.2:-57751551 | MS.gene02104:CDS |
AGTTTCGTTTGGAAATTGAG+CGG | 0.647114 | 2.2:-57751256 | MS.gene02104:CDS |
AAGTGGAAATGATGAAGGAG+GGG | 0.647655 | 2.2:-57751928 | None:intergenic |
CGGATGAAGCTAAAATGATG+TGG | 0.651813 | 2.2:-57751643 | MS.gene02104:CDS |
CCAATCATCAGTATGCTCCA+AGG | 0.652705 | 2.2:+57751046 | None:intergenic |
TGTAATGAAACCCATGAAGG+TGG | 0.653529 | 2.2:-57751608 | MS.gene02104:CDS |
TGATTGGTGTCATAATAAGA+GGG | 0.657093 | 2.2:-57751030 | MS.gene02104:CDS |
AACACTTTCTGAGTGGCAGG+AGG | 0.664523 | 2.2:-57751285 | MS.gene02104:CDS |
TCAAATTTAAGACTACCCAC+AGG | 0.666742 | 2.2:+57751536 | None:intergenic |
AATTACGGATCAGTTATCGA+AGG | 0.666771 | 2.2:-57751312 | MS.gene02104:CDS |
GTCACAGCAACAACTGACTG+AGG | 0.687357 | 2.2:-57750496 | MS.gene02104:CDS |
ACTTACGTTGAAATCAACAG+TGG | 0.697644 | 2.2:-57750109 | MS.gene02104:CDS |
TAATGCTGTTGAGGAACAGG+CGG | 0.704892 | 2.2:-57751738 | MS.gene02104:CDS |
AGGTAACAACACTTTCTGAG+TGG | 0.720674 | 2.2:-57751292 | MS.gene02104:CDS |
AATATTGCAACATTACCCTG+GGG | 0.779062 | 2.2:-57747949 | MS.gene02104:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAATCAAATTATATTCAA+AGG | - | chr2.2:57748360-57748379 | MS.gene02104:intron | 10.0% |
!! | ATTTCAAAAAATATCTTATA+GGG | + | chr2.2:57749896-57749915 | None:intergenic | 10.0% |
!! | AAAAATTATATTTAGAAGTG+GGG | + | chr2.2:57750207-57750226 | None:intergenic | 15.0% |
!! | AAAATGATAAAAATAGACTA+TGG | + | chr2.2:57750718-57750737 | None:intergenic | 15.0% |
!! | AAGGAAATAAATAAAATTAG+AGG | - | chr2.2:57747076-57747095 | MS.gene02104:intron | 15.0% |
!! | ACATTCATGAAAAAAAAAAA+AGG | - | chr2.2:57751071-57751090 | MS.gene02104:CDS | 15.0% |
!! | CAAAAATTATATTTAGAAGT+GGG | + | chr2.2:57750208-57750227 | None:intergenic | 15.0% |
!! | CATTTCAAAAAATATCTTAT+AGG | + | chr2.2:57749897-57749916 | None:intergenic | 15.0% |
!! | TTATACTTAACAAATCTAAT+TGG | + | chr2.2:57751582-57751601 | None:intergenic | 15.0% |
!!! | AATTTTTTGAAGGATAATTT+GGG | - | chr2.2:57749113-57749132 | MS.gene02104:CDS | 15.0% |
!!! | ATTGTAATTTGTAAAAACAT+AGG | - | chr2.2:57750107-57750126 | MS.gene02104:CDS | 15.0% |
!!! | TAATTTTTTGAAGGATAATT+TGG | - | chr2.2:57749112-57749131 | MS.gene02104:CDS | 15.0% |
!!! | TAGTTGTTTTTAAATATAGT+TGG | - | chr2.2:57750856-57750875 | MS.gene02104:CDS | 15.0% |
!!! | TAGTTTTCTTATTTGTAATT+TGG | - | chr2.2:57751755-57751774 | MS.gene02104:CDS | 15.0% |
!! | AAAAAATTATGTGATGTTTC+TGG | + | chr2.2:57749534-57749553 | None:intergenic | 20.0% |
!! | AAAAGGAGAATTTATTACAA+GGG | - | chr2.2:57748478-57748497 | MS.gene02104:intron | 20.0% |
!! | AAAATTATATTTAGAAGTGG+GGG | + | chr2.2:57750206-57750225 | None:intergenic | 20.0% |
!! | ACATGTTTAATTAAATTAGG+AGG | - | chr2.2:57751707-57751726 | MS.gene02104:CDS | 20.0% |
!! | ATTACTAAGTAATGTAGAAT+TGG | - | chr2.2:57751250-57751269 | MS.gene02104:CDS | 20.0% |
!! | CTAATAAACCAAAACAAATA+TGG | + | chr2.2:57751438-57751457 | None:intergenic | 20.0% |
!! | GCAAAAATTATATTTAGAAG+TGG | + | chr2.2:57750209-57750228 | None:intergenic | 20.0% |
!! | GTCACATGTTTAATTAAATT+AGG | - | chr2.2:57751704-57751723 | MS.gene02104:CDS | 20.0% |
!! | GTCTTATATCATAATCATAT+TGG | + | chr2.2:57751366-57751385 | None:intergenic | 20.0% |
!! | TCATATTACAATTATTAGAG+AGG | + | chr2.2:57749169-57749188 | None:intergenic | 20.0% |
!! | TTAAACTCGATTTCATATTA+TGG | - | chr2.2:57749326-57749345 | MS.gene02104:intron | 20.0% |
!! | TTAATGATTGTACATAATTG+AGG | - | chr2.2:57750663-57750682 | MS.gene02104:CDS | 20.0% |
!! | TTTAAATATAGTTGGATGTT+GGG | - | chr2.2:57750864-57750883 | MS.gene02104:CDS | 20.0% |
!!! | AAAATTTATTTTAACCAGCA+AGG | - | chr2.2:57749052-57749071 | MS.gene02104:intron | 20.0% |
!!! | AACAACAAAACTTTCATTTT+CGG | + | chr2.2:57751277-57751296 | None:intergenic | 20.0% |
!!! | AACATTAAAACAAAGTATCA+GGG | + | chr2.2:57751139-57751158 | None:intergenic | 20.0% |
!!! | ATATTTTAGTTTGTTGTTCT+CGG | + | chr2.2:57748427-57748446 | None:intergenic | 20.0% |
!!! | ATTAGATATCTTTTCAAGTT+GGG | + | chr2.2:57750415-57750434 | None:intergenic | 20.0% |
!!! | ATTTTTTGAAGGATAATTTG+GGG | - | chr2.2:57749114-57749133 | MS.gene02104:CDS | 20.0% |
!!! | TAAATGTCTCTTTAAAGATA+TGG | - | chr2.2:57748170-57748189 | MS.gene02104:intron | 20.0% |
!!! | TAACATTAAAACAAAGTATC+AGG | + | chr2.2:57751140-57751159 | None:intergenic | 20.0% |
!!! | TATTTATTTCCTTTTTGAGT+TGG | + | chr2.2:57747069-57747088 | None:intergenic | 20.0% |
!!! | TCATATTATGGTAATGATTA+TGG | - | chr2.2:57749338-57749357 | MS.gene02104:intron | 20.0% |
!!! | TTGTAAAAACATAGGTATTT+TGG | - | chr2.2:57750115-57750134 | MS.gene02104:CDS | 20.0% |
!!! | TTTTAAATATAGTTGGATGT+TGG | - | chr2.2:57750863-57750882 | MS.gene02104:CDS | 20.0% |
! | AAAAACAGAAAAGAAATCAG+AGG | + | chr2.2:57748992-57749011 | None:intergenic | 25.0% |
! | AAAAGATATCTAATCTTCAC+TGG | - | chr2.2:57750421-57750440 | MS.gene02104:CDS | 25.0% |
! | AAAGATATCTAATCTTCACT+GGG | - | chr2.2:57750422-57750441 | MS.gene02104:CDS | 25.0% |
! | AAAGGAAATTGAAGAATACA+AGG | - | chr2.2:57748653-57748672 | MS.gene02104:intron | 25.0% |
! | AAAGGAGAATTTATTACAAG+GGG | - | chr2.2:57748479-57748498 | MS.gene02104:intron | 25.0% |
! | AAATGTTATAAGTGCCAAAA+AGG | - | chr2.2:57749922-57749941 | MS.gene02104:CDS | 25.0% |
! | AACTTGAGATCTCTTTATAT+TGG | + | chr2.2:57747423-57747442 | None:intergenic | 25.0% |
! | AAGGCTAAAACAAAAATTTG+TGG | - | chr2.2:57751090-57751109 | MS.gene02104:CDS | 25.0% |
! | AATTATATTCAAAGGAGCTT+TGG | - | chr2.2:57748368-57748387 | MS.gene02104:intron | 25.0% |
! | ACGAGACATTAAATTAGAAA+AGG | + | chr2.2:57748947-57748966 | None:intergenic | 25.0% |
! | ACTTGTTCCCATAAAAATAT+AGG | - | chr2.2:57749710-57749729 | MS.gene02104:CDS | 25.0% |
! | AGAAGGAGAAAAAATAGATT+TGG | - | chr2.2:57750321-57750340 | MS.gene02104:CDS | 25.0% |
! | AGGCTAAAACAAAAATTTGT+GGG | - | chr2.2:57751091-57751110 | MS.gene02104:CDS | 25.0% |
! | ATCTAATTGGACACTAAAAA+TGG | + | chr2.2:57751569-57751588 | None:intergenic | 25.0% |
! | ATGATTAATATAACCAACTG+CGG | - | chr2.2:57751014-57751033 | MS.gene02104:CDS | 25.0% |
! | ATGGGAACAAGTAAAAATTT+GGG | + | chr2.2:57749702-57749721 | None:intergenic | 25.0% |
! | ATGTTTCAAGAAATTGTATG+AGG | - | chr2.2:57748901-57748920 | MS.gene02104:intron | 25.0% |
! | ATTAAATACGTGTACTCTTT+GGG | + | chr2.2:57750828-57750847 | None:intergenic | 25.0% |
! | CAATTTATGGATGAGATTAA+TGG | + | chr2.2:57748841-57748860 | None:intergenic | 25.0% |
! | GAAAAGGAGAATTTATTACA+AGG | - | chr2.2:57748477-57748496 | MS.gene02104:intron | 25.0% |
! | GAAAATATGAAAATACGTCA+AGG | - | chr2.2:57750081-57750100 | MS.gene02104:CDS | 25.0% |
! | GACATTACCTTTGAATTATT+TGG | - | chr2.2:57749074-57749093 | MS.gene02104:CDS | 25.0% |
! | GATGAAGAAATAATTAGTAC+TGG | + | chr2.2:57749956-57749975 | None:intergenic | 25.0% |
! | GCTGTTTATTATACAATAGT+GGG | - | chr2.2:57750739-57750758 | MS.gene02104:CDS | 25.0% |
! | GTTAAGTATAACTTGAAAGA+TGG | - | chr2.2:57751591-57751610 | MS.gene02104:CDS | 25.0% |
! | TAACCATTGTCAACAATTTA+TGG | + | chr2.2:57748854-57748873 | None:intergenic | 25.0% |
! | TATGGGAACAAGTAAAAATT+TGG | + | chr2.2:57749703-57749722 | None:intergenic | 25.0% |
! | TATTAAATACGTGTACTCTT+TGG | + | chr2.2:57750829-57750848 | None:intergenic | 25.0% |
! | TATTAGAAAACTACTCATCA+TGG | - | chr2.2:57750943-57750962 | MS.gene02104:CDS | 25.0% |
! | TCACATTCCAAATAATTCAA+AGG | + | chr2.2:57749084-57749103 | None:intergenic | 25.0% |
! | TCTGTGTATGTTAACATTTA+GGG | + | chr2.2:57750015-57750034 | None:intergenic | 25.0% |
! | TGTTTAATTAAATTAGGAGG+TGG | - | chr2.2:57751710-57751729 | MS.gene02104:CDS | 25.0% |
! | TTCAACAAGAAGATTTAGTT+CGG | - | chr2.2:57747105-57747124 | MS.gene02104:intron | 25.0% |
! | TTCTGTGTATGTTAACATTT+AGG | + | chr2.2:57750016-57750035 | None:intergenic | 25.0% |
!! | TTATCTATTTCTCAATCTTG+TGG | - | chr2.2:57749602-57749621 | MS.gene02104:intron | 25.0% |
!! | TTTTAACGCTTCATTATTGA+TGG | + | chr2.2:57749036-57749055 | None:intergenic | 25.0% |
!!! | AAATGTGATTTTGATTACCA+TGG | + | chr2.2:57749741-57749760 | None:intergenic | 25.0% |
!!! | GATTAGATATCTTTTCAAGT+TGG | + | chr2.2:57750416-57750435 | None:intergenic | 25.0% |
!!! | TTTTTGATGATATCGATGAA+CGG | - | chr2.2:57746753-57746772 | MS.gene02104:intron | 25.0% |
AAAACAAAAATTTGTGGGAG+AGG | - | chr2.2:57751096-57751115 | MS.gene02104:CDS | 30.0% | |
AAACAAAAATTTGTGGGAGA+GGG | - | chr2.2:57751097-57751116 | MS.gene02104:CDS | 30.0% | |
AAAGGTCAATTACTAGACTT+AGG | + | chr2.2:57750493-57750512 | None:intergenic | 30.0% | |
AAATTGAATGAAGTCCTTGA+TGG | - | chr2.2:57747874-57747893 | MS.gene02104:intron | 30.0% | |
AAGCTAAGTAGTTTATGTGT+TGG | - | chr2.2:57746893-57746912 | MS.gene02104:intron | 30.0% | |
ACAGTTAATCGTCAAATCTT+AGG | - | chr2.2:57749853-57749872 | MS.gene02104:CDS | 30.0% | |
AGAAAAGCAAAAGATGGAAT+TGG | - | chr2.2:57748521-57748540 | MS.gene02104:intron | 30.0% | |
AGACAGATTGTCAACAAAAT+TGG | - | chr2.2:57748574-57748593 | MS.gene02104:intron | 30.0% | |
ATCATGGTGTGTGATATAAA+GGG | - | chr2.2:57750959-57750978 | MS.gene02104:CDS | 30.0% | |
ATCGAGTCAATTATGATTGA+AGG | - | chr2.2:57748327-57748346 | MS.gene02104:intron | 30.0% | |
ATTCATTGTCTTCATGAAGA+AGG | - | chr2.2:57751786-57751805 | MS.gene02104:CDS | 30.0% | |
ATTGTAAATCCAACAGCTTA+GGG | - | chr2.2:57751176-57751195 | MS.gene02104:CDS | 30.0% | |
CAGTGAATTAATCATATGGT+TGG | - | chr2.2:57750242-57750261 | MS.gene02104:CDS | 30.0% | |
CATAATTGAGGTATATGTAG+TGG | - | chr2.2:57750675-57750694 | MS.gene02104:CDS | 30.0% | |
CATCCATAAATTGTTGACAA+TGG | - | chr2.2:57748848-57748867 | MS.gene02104:intron | 30.0% | |
CCAAAACTAACAATAGTAAC+CGG | - | chr2.2:57751657-57751676 | MS.gene02104:CDS | 30.0% | |
CGCTGTTTATTATACAATAG+TGG | - | chr2.2:57750738-57750757 | MS.gene02104:CDS | 30.0% | |
CTATTGAATCTGAAAGAAAG+AGG | - | chr2.2:57747781-57747800 | MS.gene02104:intron | 30.0% | |
CTTGTCTTTCTTCAATGAAA+AGG | + | chr2.2:57747812-57747831 | None:intergenic | 30.0% | |
GACATAAGGATGAAGTAAAT+TGG | + | chr2.2:57749274-57749293 | None:intergenic | 30.0% | |
GTGAGTGATTCTGTTATAAA+GGG | - | chr2.2:57746794-57746813 | MS.gene02104:intron | 30.0% | |
GTTCATATTTGTGTTCAACT+TGG | - | chr2.2:57749209-57749228 | MS.gene02104:intron | 30.0% | |
GTTGCAATATTGGTGAATAA+TGG | + | chr2.2:57750603-57750622 | None:intergenic | 30.0% | |
TAACGGAAATAATGCCATTA+TGG | + | chr2.2:57751623-57751642 | None:intergenic | 30.0% | |
TATTGTAAATCCAACAGCTT+AGG | - | chr2.2:57751175-57751194 | MS.gene02104:CDS | 30.0% | |
TCATCCTTATGTCAAGAAAA+CGG | - | chr2.2:57749281-57749300 | MS.gene02104:intron | 30.0% | |
TCGAGTCAATTATGATTGAA+GGG | - | chr2.2:57748328-57748347 | MS.gene02104:intron | 30.0% | |
TCTACATTGCATAACAGAAT+GGG | - | chr2.2:57750990-57751009 | MS.gene02104:CDS | 30.0% | |
TGAAAGTCTGAAAGATACTA+TGG | - | chr2.2:57747204-57747223 | MS.gene02104:intron | 30.0% | |
TGACATTATGATAGTTGTAC+TGG | - | chr2.2:57751412-57751431 | MS.gene02104:CDS | 30.0% | |
TGATTATGATATAAGACGTG+TGG | - | chr2.2:57751369-57751388 | MS.gene02104:CDS | 30.0% | |
TGATTCTGTTATAAAGGGTA+TGG | - | chr2.2:57746799-57746818 | MS.gene02104:intron | 30.0% | |
TGGGAACAAGTAAAAATTTG+GGG | + | chr2.2:57749701-57749720 | None:intergenic | 30.0% | |
TTGCAGTTTCAAAGATAGAT+TGG | - | chr2.2:57747939-57747958 | MS.gene02104:intron | 30.0% | |
TTGTCAACAAAATTGGATTG+TGG | - | chr2.2:57748581-57748600 | MS.gene02104:intron | 30.0% | |
! | AAAACCGTTTTCTTGACATA+AGG | + | chr2.2:57749288-57749307 | None:intergenic | 30.0% |
! | AAGAAAACTTTTGTCTTAGG+CGG | - | chr2.2:57747755-57747774 | MS.gene02104:intron | 30.0% |
! | AAGCAAGTAGTGTTATTAGA+AGG | - | chr2.2:57750304-57750323 | MS.gene02104:CDS | 30.0% |
! | AATCATATGGTTGGTTCAAA+TGG | - | chr2.2:57750251-57750270 | MS.gene02104:CDS | 30.0% |
! | AGATTTGGAATCAATGATCA+CGG | - | chr2.2:57750336-57750355 | MS.gene02104:CDS | 30.0% |
! | ATATATGGAACCATCTTTTC+AGG | - | chr2.2:57749374-57749393 | MS.gene02104:intron | 30.0% |
! | ATCATATGGTTGGTTCAAAT+GGG | - | chr2.2:57750252-57750271 | MS.gene02104:CDS | 30.0% |
! | ATGAACGGTTGATTATTTCT+AGG | - | chr2.2:57746768-57746787 | MS.gene02104:intron | 30.0% |
! | CCTAAGACAAAAGTTTTCTT+CGG | + | chr2.2:57747755-57747774 | None:intergenic | 30.0% |
! | CTTCAACTTTGGAAGAAAAT+GGG | - | chr2.2:57747596-57747615 | MS.gene02104:intron | 30.0% |
! | CTTGGTTCACCAAAATTTTA+CGG | + | chr2.2:57750383-57750402 | None:intergenic | 30.0% |
! | CTTTTCATTGAAGAAAGACA+AGG | - | chr2.2:57747810-57747829 | MS.gene02104:intron | 30.0% |
! | TCAACAAGAAGATTTAGTTC+GGG | - | chr2.2:57747106-57747125 | MS.gene02104:intron | 30.0% |
!! | AAGTAGTTTATGTGTTGGTT+CGG | - | chr2.2:57746898-57746917 | MS.gene02104:intron | 30.0% |
!! | AATATGCATTTGCTATGCTA+TGG | - | chr2.2:57749565-57749584 | MS.gene02104:intron | 30.0% |
!! | ATATGCATTTGCTATGCTAT+GGG | - | chr2.2:57749566-57749585 | MS.gene02104:intron | 30.0% |
!! | ATGATTGGTGTCATAATAAG+AGG | - | chr2.2:57747530-57747549 | MS.gene02104:intron | 30.0% |
!! | CTTCATCATTCTGATTTGTT+TGG | - | chr2.2:57749969-57749988 | MS.gene02104:CDS | 30.0% |
!! | GACTTCATTCAATTTTGAGA+TGG | + | chr2.2:57747869-57747888 | None:intergenic | 30.0% |
!! | GTAAAATTTTGGTGAACCAA+GGG | - | chr2.2:57750382-57750401 | MS.gene02104:CDS | 30.0% |
!! | TGATTGGTGTCATAATAAGA+GGG | - | chr2.2:57747531-57747550 | MS.gene02104:intron | 30.0% |
!! | TTTGTTGTTGCAAACATGAA+TGG | - | chr2.2:57751288-57751307 | MS.gene02104:CDS | 30.0% |
!!! | ACGTGCTTCTAATTTTTTGA+AGG | - | chr2.2:57749103-57749122 | MS.gene02104:CDS | 30.0% |
!!! | ATCTTTCAGGTTGATCTTTT+AGG | - | chr2.2:57750523-57750542 | MS.gene02104:CDS | 30.0% |
!!! | TCGTTTTTTAGATGGTGTTA+TGG | - | chr2.2:57746982-57747001 | MS.gene02104:intron | 30.0% |
!!! | TCTTTCAGGTTGATCTTTTA+GGG | - | chr2.2:57750524-57750543 | MS.gene02104:CDS | 30.0% |
AAACAAAATATTCTCACCCC+AGG | + | chr2.2:57750631-57750650 | None:intergenic | 35.0% | |
AAAGATGGATGAGACCATAA+TGG | - | chr2.2:57751606-57751625 | MS.gene02104:CDS | 35.0% | |
AAATGGTAAGAACTTCTGCA+TGG | + | chr2.2:57751552-57751571 | None:intergenic | 35.0% | |
AACAAAATATTCTCACCCCA+GGG | + | chr2.2:57750630-57750649 | None:intergenic | 35.0% | |
AATATTGCAACATTACCCTG+GGG | - | chr2.2:57750612-57750631 | MS.gene02104:CDS | 35.0% | |
AATCGGACTATGGTTAAATC+TGG | - | chr2.2:57749823-57749842 | MS.gene02104:CDS | 35.0% | |
AATTACGGATCAGTTATCGA+AGG | - | chr2.2:57747249-57747268 | MS.gene02104:intron | 35.0% | |
AATTATGATTGAAGGGCTAC+TGG | - | chr2.2:57748335-57748354 | MS.gene02104:intron | 35.0% | |
ACAGTGCTCAAGTTTCTAAT+GGG | - | chr2.2:57748283-57748302 | MS.gene02104:intron | 35.0% | |
ACATGAAGATCTCGAACAAA+GGG | - | chr2.2:57748692-57748711 | MS.gene02104:intron | 35.0% | |
ACTTACGTTGAAATCAACAG+TGG | - | chr2.2:57748452-57748471 | MS.gene02104:intron | 35.0% | |
AGATAGATTTATGAAGCCTG+TGG | - | chr2.2:57747009-57747028 | MS.gene02104:intron | 35.0% | |
AGATCAACCTGAAAGATCAT+AGG | + | chr2.2:57750520-57750539 | None:intergenic | 35.0% | |
AGATGCATTGAAGTGTATTG+AGG | - | chr2.2:57748779-57748798 | MS.gene02104:intron | 35.0% | |
AGATGGTTCCATATATGACT+TGG | + | chr2.2:57749370-57749389 | None:intergenic | 35.0% | |
AGCTAAAATGATGTGGTCTT+CGG | - | chr2.2:57746925-57746944 | MS.gene02104:intron | 35.0% | |
AGTGTATTGAGGCAAAAGAA+AGG | - | chr2.2:57748790-57748809 | MS.gene02104:intron | 35.0% | |
AGTTTCGTTTGGAAATTGAG+CGG | - | chr2.2:57747305-57747324 | MS.gene02104:intron | 35.0% | |
ATCAAGAGTCTACACAGAAT+CGG | - | chr2.2:57749806-57749825 | MS.gene02104:CDS | 35.0% | |
ATCCGTAATTTCTATCCTTC+TGG | + | chr2.2:57747239-57747258 | None:intergenic | 35.0% | |
ATCTGAGAATCTTCAACTGA+AGG | - | chr2.2:57747972-57747991 | MS.gene02104:CDS | 35.0% | |
CAATATTGCAACATTACCCT+GGG | - | chr2.2:57750611-57750630 | MS.gene02104:CDS | 35.0% | |
CATCATGGTGTGTGATATAA+AGG | - | chr2.2:57750958-57750977 | MS.gene02104:CDS | 35.0% | |
CATGCTAGCTGATAAGAATA+AGG | - | chr2.2:57747996-57748015 | MS.gene02104:CDS | 35.0% | |
CTCCAGAAGGATAGAAATTA+CGG | - | chr2.2:57747234-57747253 | MS.gene02104:intron | 35.0% | |
CTCTACATTGCATAACAGAA+TGG | - | chr2.2:57750989-57751008 | MS.gene02104:CDS | 35.0% | |
CTTGTAAGAAGAGAATTGAC+TGG | - | chr2.2:57751898-57751917 | MS.gene02104:CDS | 35.0% | |
GAAATCAACAGTGGAAGAAA+AGG | - | chr2.2:57748461-57748480 | MS.gene02104:intron | 35.0% | |
GAGAATTGCGCAAAAAGAAT+CGG | - | chr2.2:57746850-57746869 | MS.gene02104:intron | 35.0% | |
GATAGATTTATGAAGCCTGT+GGG | - | chr2.2:57747010-57747029 | MS.gene02104:intron | 35.0% | |
GATCAACCTGAAAGATCATA+GGG | + | chr2.2:57750519-57750538 | None:intergenic | 35.0% | |
GCAATTTCTCATTTCCATCA+AGG | + | chr2.2:57747891-57747910 | None:intergenic | 35.0% | |
GGAACAAGAAAAGCAAAAGA+TGG | - | chr2.2:57748515-57748534 | MS.gene02104:intron | 35.0% | |
GGAACAAGTAAAAATTTGGG+GGG | + | chr2.2:57749699-57749718 | None:intergenic | 35.0% | |
GGGAACAAGTAAAAATTTGG+GGG | + | chr2.2:57749700-57749719 | None:intergenic | 35.0% | |
GGTGAGTGATTCTGTTATAA+AGG | - | chr2.2:57746793-57746812 | MS.gene02104:intron | 35.0% | |
GTGTATTGAGGCAAAAGAAA+GGG | - | chr2.2:57748791-57748810 | MS.gene02104:intron | 35.0% | |
TACATGAAGATCTCGAACAA+AGG | - | chr2.2:57748691-57748710 | MS.gene02104:intron | 35.0% | |
TATTTCTCAATCTTGTGGAG+AGG | - | chr2.2:57749607-57749626 | MS.gene02104:intron | 35.0% | |
TCGACATAAATCCATCTTTC+CGG | + | chr2.2:57747175-57747194 | None:intergenic | 35.0% | |
TGAAAGATCATAGGGTCAAA+AGG | + | chr2.2:57750511-57750530 | None:intergenic | 35.0% | |
TGAGCACATAATTGAGGAAA+TGG | - | chr2.2:57746724-57746743 | MS.gene02104:intron | 35.0% | |
TGGGCAGTGAATTAATCATA+TGG | - | chr2.2:57750238-57750257 | MS.gene02104:CDS | 35.0% | |
TGGTAATTCGCAATTGTATC+CGG | - | chr2.2:57747329-57747348 | MS.gene02104:intron | 35.0% | |
TGTTATAAGTGCCAAAAAGG+AGG | - | chr2.2:57749925-57749944 | MS.gene02104:CDS | 35.0% | |
TTGCTTGTACAAAAATCCCA+TGG | + | chr2.2:57749458-57749477 | None:intergenic | 35.0% | |
TTTGCAGATTATCGAGATTC+TGG | - | chr2.2:57751873-57751892 | MS.gene02104:CDS | 35.0% | |
! | AAAAAGCTCTGATCTTGCAA+AGG | - | chr2.2:57749489-57749508 | MS.gene02104:intron | 35.0% |
! | AAAGTATCAGGGCAATTGAA+AGG | + | chr2.2:57751128-57751147 | None:intergenic | 35.0% |
! | AAGAAGATTTAGTTCGGGTT+CGG | - | chr2.2:57747111-57747130 | MS.gene02104:intron | 35.0% |
! | AGAAAACTTTTGTCTTAGGC+GGG | - | chr2.2:57747756-57747775 | MS.gene02104:intron | 35.0% |
! | ATAATTTTTGCCGCATGTTG+TGG | - | chr2.2:57750218-57750237 | MS.gene02104:CDS | 35.0% |
! | CCGAAGAAAACTTTTGTCTT+AGG | - | chr2.2:57747752-57747771 | MS.gene02104:intron | 35.0% |
! | CTAACAGGCTGAAAATTTTG+TGG | - | chr2.2:57749241-57749260 | MS.gene02104:intron | 35.0% |
! | GCTTCAACTTTGGAAGAAAA+TGG | - | chr2.2:57747595-57747614 | MS.gene02104:intron | 35.0% |
! | TAAAAATATAGGTGTCGCCA+TGG | - | chr2.2:57749721-57749740 | MS.gene02104:CDS | 35.0% |
! | TAATTTTTGCCGCATGTTGT+GGG | - | chr2.2:57750219-57750238 | MS.gene02104:CDS | 35.0% |
! | TCAAATTTAAGACTACCCAC+AGG | + | chr2.2:57747028-57747047 | None:intergenic | 35.0% |
! | TCACCAAAATTTTACGGCAT+AGG | + | chr2.2:57750377-57750396 | None:intergenic | 35.0% |
! | TGATGGATGACGACATAAAA+TGG | + | chr2.2:57749019-57749038 | None:intergenic | 35.0% |
! | TGTTATGAATGGTGGTGAAA+AGG | - | chr2.2:57746661-57746680 | MS.gene02104:CDS | 35.0% |
! | TTTTGACCCTATGATCTTTC+AGG | - | chr2.2:57750510-57750529 | MS.gene02104:CDS | 35.0% |
!! | ACGGTTGATTATTTCTAGGA+TGG | - | chr2.2:57746772-57746791 | MS.gene02104:intron | 35.0% |
!! | ACTTGGTCTTGTTAACTAAC+AGG | - | chr2.2:57749226-57749245 | MS.gene02104:intron | 35.0% |
!! | CCGGTTACTATTGTTAGTTT+TGG | + | chr2.2:57751660-57751679 | None:intergenic | 35.0% |
!! | CGTAAAATTTTGGTGAACCA+AGG | - | chr2.2:57750381-57750400 | MS.gene02104:CDS | 35.0% |
!! | GGCGACACCTATATTTTTAT+GGG | + | chr2.2:57749720-57749739 | None:intergenic | 35.0% |
!! | GGTGAAAAGGTTTTTGAGAA+TGG | - | chr2.2:57746674-57746693 | MS.gene02104:CDS | 35.0% |
!! | GGTTTTTGAGAATGGTGTTA+AGG | - | chr2.2:57746682-57746701 | MS.gene02104:CDS | 35.0% |
!! | TGGCGACACCTATATTTTTA+TGG | + | chr2.2:57749721-57749740 | None:intergenic | 35.0% |
!! | TGTACTGGCCATATTTGTTT+TGG | - | chr2.2:57751427-57751446 | MS.gene02104:CDS | 35.0% |
!!! | ACACTGTCTGTTTTTGAAAC+TGG | - | chr2.2:57747472-57747491 | MS.gene02104:intron | 35.0% |
!!! | CACTGTCTGTTTTTGAAACT+GGG | - | chr2.2:57747473-57747492 | MS.gene02104:intron | 35.0% |
!!! | CTTTCAGGTTGATCTTTTAG+GGG | - | chr2.2:57750525-57750544 | MS.gene02104:CDS | 35.0% |
!!! | TCAATTTTGAGATGGCATCA+GGG | + | chr2.2:57747861-57747880 | None:intergenic | 35.0% |
!!! | TTCAATTTTGAGATGGCATC+AGG | + | chr2.2:57747862-57747881 | None:intergenic | 35.0% |
AAAAAGAATCGGAGGTCGTT+GGG | - | chr2.2:57746861-57746880 | MS.gene02104:intron | 40.0% | |
AAGCCTGATAGTTTGGATTC+TGG | - | chr2.2:57747643-57747662 | MS.gene02104:intron | 40.0% | |
AAGGGAAACCAGGAAACAAA+TGG | - | chr2.2:57748809-57748828 | MS.gene02104:intron | 40.0% | |
AATGGTAATTCGTCATCCCA+TGG | - | chr2.2:57751306-57751325 | MS.gene02104:CDS | 40.0% | |
AATTGCGCAAAAAGAATCGG+AGG | - | chr2.2:57746853-57746872 | MS.gene02104:intron | 40.0% | |
ACAATCTGTTCAGAAGCTTG+AGG | - | chr2.2:57748098-57748117 | MS.gene02104:intron | 40.0% | |
AGAAGCTTGAGGATGATGTT+GGG | - | chr2.2:57748109-57748128 | MS.gene02104:intron | 40.0% | |
AGAGACAATTCTTAGCCGAA+TGG | + | chr2.2:57751498-57751517 | None:intergenic | 40.0% | |
AGGTAACAACACTTTCTGAG+TGG | - | chr2.2:57747269-57747288 | MS.gene02104:intron | 40.0% | |
ATGCAGATGAATAGGTGTGA+GGG | - | chr2.2:57749665-57749684 | MS.gene02104:CDS | 40.0% | |
CATTTCCGTGTTCTTTCCAT+GGG | + | chr2.2:57751325-57751344 | None:intergenic | 40.0% | |
CCAATATTGCAACATTACCC+TGG | - | chr2.2:57750610-57750629 | MS.gene02104:CDS | 40.0% | |
CCAGGGTAATGTTGCAATAT+TGG | + | chr2.2:57750613-57750632 | None:intergenic | 40.0% | |
CGAATTGTGAGGATACATCA+AGG | - | chr2.2:57750276-57750295 | MS.gene02104:CDS | 40.0% | |
CGGATGAAGCTAAAATGATG+TGG | - | chr2.2:57746918-57746937 | MS.gene02104:intron | 40.0% | |
CGTTGTAATGAAACCCATGA+AGG | - | chr2.2:57746950-57746969 | MS.gene02104:intron | 40.0% | |
CTATGGATTCTTTCTCCAGA+AGG | - | chr2.2:57747221-57747240 | MS.gene02104:intron | 40.0% | |
CTCTTCTTAGACTCCTTGAA+AGG | - | chr2.2:57750560-57750579 | MS.gene02104:CDS | 40.0% | |
GAAGACTTGCATCTCAAGTA+TGG | - | chr2.2:57748216-57748235 | MS.gene02104:intron | 40.0% | |
GACAGTGCTCAAGTTTCTAA+TGG | - | chr2.2:57748282-57748301 | MS.gene02104:intron | 40.0% | |
GATCACGGTATCAGTATATC+AGG | - | chr2.2:57750351-57750370 | MS.gene02104:CDS | 40.0% | |
GATTAGCAAGCCTGATAGTT+TGG | - | chr2.2:57747636-57747655 | MS.gene02104:intron | 40.0% | |
GCTTTCGACAGATCATTTGT+CGG | - | chr2.2:57747573-57747592 | MS.gene02104:intron | 40.0% | |
GGTCAGAACCAAGTCATATA+TGG | - | chr2.2:57749359-57749378 | MS.gene02104:intron | 40.0% | |
GTGCAACGTATATCCTTTCA+AGG | + | chr2.2:57750576-57750595 | None:intergenic | 40.0% | |
TAAACTGTCAAGCTGTTGAG+AGG | + | chr2.2:57748547-57748566 | None:intergenic | 40.0% | |
TAATATAACCAACTGCGGTG+TGG | - | chr2.2:57751019-57751038 | MS.gene02104:CDS | 40.0% | |
TCATTTCCGTGTTCTTTCCA+TGG | + | chr2.2:57751326-57751345 | None:intergenic | 40.0% | |
TCTCATGCACTTGAGATTCA+TGG | + | chr2.2:57747729-57747748 | None:intergenic | 40.0% | |
TCTTGGTGAGCACATAATTG+AGG | - | chr2.2:57746718-57746737 | MS.gene02104:intron | 40.0% | |
TGCTTTCAAGCCTGAAAAGA+TGG | + | chr2.2:57749387-57749406 | None:intergenic | 40.0% | |
TGTAATGAAACCCATGAAGG+TGG | - | chr2.2:57746953-57746972 | MS.gene02104:intron | 40.0% | |
TGTGGAGAACAGTAAAGAGT+TGG | - | chr2.2:57748599-57748618 | MS.gene02104:intron | 40.0% | |
TTCAAAGGTAATGTCCTTGC+TGG | + | chr2.2:57749069-57749088 | None:intergenic | 40.0% | |
TTCAAATGGGTCGAATTGTG+AGG | - | chr2.2:57750265-57750284 | MS.gene02104:CDS | 40.0% | |
TTGCAACATAGGTTTGGAGA+GGG | - | chr2.2:57751682-57751701 | MS.gene02104:CDS | 40.0% | |
TTGGAAGAAAATGGGAAGCA+CGG | - | chr2.2:57747604-57747623 | MS.gene02104:intron | 40.0% | |
TTGGAAGCTCATTTACTTCC+CGG | + | chr2.2:57750912-57750931 | None:intergenic | 40.0% | |
! | AAGGATGATGATGAGAGTCT+TGG | - | chr2.2:57746701-57746720 | MS.gene02104:intron | 40.0% |
! | AGAAACTTGAGCACTGTCAA+TGG | + | chr2.2:57748280-57748299 | None:intergenic | 40.0% |
! | AGGCCTATGCCGTAAAATTT+TGG | - | chr2.2:57750371-57750390 | MS.gene02104:CDS | 40.0% |
! | ATTTAGTTCGGGTTCGGATT+TGG | - | chr2.2:57747117-57747136 | MS.gene02104:intron | 40.0% |
! | CAAGTTGGGTATTAAACCCT+TGG | + | chr2.2:57750401-57750420 | None:intergenic | 40.0% |
! | GCTTATTTCTCATGGATCCT+TGG | - | chr2.2:57747498-57747517 | MS.gene02104:intron | 40.0% |
! | GTGTACTCTTTGGGTCTTTT+TGG | + | chr2.2:57750819-57750838 | None:intergenic | 40.0% |
!! | ACTCTTTGGGTCTTTTTGGT+TGG | + | chr2.2:57750815-57750834 | None:intergenic | 40.0% |
!! | GAGGGGTTTGTTGTTATGAA+TGG | - | chr2.2:57746650-57746669 | MS.gene02104:CDS | 40.0% |
!! | GGGTTTGTTGTTATGAATGG+TGG | - | chr2.2:57746653-57746672 | MS.gene02104:CDS | 40.0% |
!! | TCATTTGTCGGCTTCAACTT+TGG | - | chr2.2:57747585-57747604 | MS.gene02104:intron | 40.0% |
!! | TGGCTTTGTAGAACTAGGTA+GGG | - | chr2.2:57751389-57751408 | MS.gene02104:CDS | 40.0% |
!!! | GGTACACGTCGTTTTTTAGA+TGG | - | chr2.2:57746974-57746993 | MS.gene02104:intron | 40.0% |
!!! | TACTGGCTTATCCTCCTTTT+TGG | + | chr2.2:57749939-57749958 | None:intergenic | 40.0% |
AACAACACTTTCTGAGTGGC+AGG | - | chr2.2:57747273-57747292 | MS.gene02104:intron | 45.0% | |
AATTAGGAGGTGGCGACATT+TGG | - | chr2.2:57751720-57751739 | MS.gene02104:CDS | 45.0% | |
AATTCACTGCCCACAACATG+CGG | + | chr2.2:57750231-57750250 | None:intergenic | 45.0% | |
ACAAGGGGTAACAGATGCTT+TGG | - | chr2.2:57748494-57748513 | MS.gene02104:intron | 45.0% | |
ACAATTCTTAGCCGAATGGC+AGG | + | chr2.2:57751494-57751513 | None:intergenic | 45.0% | |
AGAGATCTCAAGTTTGCGTC+AGG | - | chr2.2:57747429-57747448 | MS.gene02104:intron | 45.0% | |
AGCCAGTGCACTTAAAACCA+TGG | - | chr2.2:57749438-57749457 | MS.gene02104:intron | 45.0% | |
AGGCAAAAGAAAGGGAAACC+AGG | - | chr2.2:57748799-57748818 | MS.gene02104:intron | 45.0% | |
CAAAAAGAATCGGAGGTCGT+TGG | - | chr2.2:57746860-57746879 | MS.gene02104:intron | 45.0% | |
CAATTCTTAGCCGAATGGCA+GGG | + | chr2.2:57751493-57751512 | None:intergenic | 45.0% | |
CAGAAGCTTGAGGATGATGT+TGG | - | chr2.2:57748108-57748127 | MS.gene02104:intron | 45.0% | |
CCAAACCTATGTTGCAACAC+CGG | + | chr2.2:57751679-57751698 | None:intergenic | 45.0% | |
CCAATCATCAGTATGCTCCA+AGG | + | chr2.2:57747518-57747537 | None:intergenic | 45.0% | |
CCTTGGAGCATACTGATGAT+TGG | - | chr2.2:57747515-57747534 | MS.gene02104:intron | 45.0% | |
CGGACTATGGTTAAATCTGG+TGG | - | chr2.2:57749826-57749845 | MS.gene02104:CDS | 45.0% | |
CTATTCATCTGCATCTGCCT+CGG | + | chr2.2:57749659-57749678 | None:intergenic | 45.0% | |
CTCAAGTTTGCGTCAGGATT+TGG | - | chr2.2:57747435-57747454 | MS.gene02104:intron | 45.0% | |
GAAGCTTGAGGATGATGTTG+GGG | - | chr2.2:57748110-57748129 | MS.gene02104:intron | 45.0% | |
GAGCCAGAATCCAAACTATC+AGG | + | chr2.2:57747649-57747668 | None:intergenic | 45.0% | |
GATCTGTCGAAAGCTTCAAG+TGG | + | chr2.2:57747567-57747586 | None:intergenic | 45.0% | |
GATGCAGATGAATAGGTGTG+AGG | - | chr2.2:57749664-57749683 | MS.gene02104:CDS | 45.0% | |
GCAGTTGAGCCAACTCAAAA+AGG | - | chr2.2:57747057-57747076 | MS.gene02104:intron | 45.0% | |
GCCAGTGCACTTAAAACCAT+GGG | - | chr2.2:57749439-57749458 | MS.gene02104:intron | 45.0% | |
GGGTATGGTTAATGCTGTTG+AGG | - | chr2.2:57746814-57746833 | MS.gene02104:intron | 45.0% | |
GGTGTGTGATATAAAGGGTC+AGG | - | chr2.2:57750964-57750983 | MS.gene02104:CDS | 45.0% | |
GGTTAATGCTGTTGAGGAAC+AGG | - | chr2.2:57746820-57746839 | MS.gene02104:intron | 45.0% | |
GTCATCCCATGGAAAGAACA+CGG | - | chr2.2:57751317-57751336 | MS.gene02104:CDS | 45.0% | |
GTCTACACAGAATCGGACTA+TGG | - | chr2.2:57749813-57749832 | MS.gene02104:CDS | 45.0% | |
GTTGCAACATAGGTTTGGAG+AGG | - | chr2.2:57751681-57751700 | MS.gene02104:CDS | 45.0% | |
TAACCTAGTTGCAGCAGCAA+AGG | - | chr2.2:57748635-57748654 | MS.gene02104:intron | 45.0% | |
TAATGCTGTTGAGGAACAGG+CGG | - | chr2.2:57746823-57746842 | MS.gene02104:intron | 45.0% | |
TATCAGTGACCCTAAGCTGT+TGG | + | chr2.2:57751188-57751207 | None:intergenic | 45.0% | |
TATTCATCTGCATCTGCCTC+GGG | + | chr2.2:57749658-57749677 | None:intergenic | 45.0% | |
TATTCTGCAGGAGAATGTGC+CGG | - | chr2.2:57747153-57747172 | MS.gene02104:intron | 45.0% | |
TCGAAAGCTTCAAGTGGACA+TGG | + | chr2.2:57747561-57747580 | None:intergenic | 45.0% | |
TCGTTTGGAAATTGAGCGGA+TGG | - | chr2.2:57747309-57747328 | MS.gene02104:intron | 45.0% | |
TCTCAGCTTTCTGCTGCTAT+GGG | - | chr2.2:57748036-57748055 | MS.gene02104:intron | 45.0% | |
TGCAGATGAATAGGTGTGAG+GGG | - | chr2.2:57749666-57749685 | MS.gene02104:CDS | 45.0% | |
TGGATACACGCAAGCTGTAA+CGG | + | chr2.2:57751640-57751659 | None:intergenic | 45.0% | |
TGGTTTAGGTGGTATTCTGC+AGG | - | chr2.2:57747141-57747160 | MS.gene02104:intron | 45.0% | |
TGTAGACTCTTGATCGCTGA+GGG | + | chr2.2:57749800-57749819 | None:intergenic | 45.0% | |
TTCTCAGCTTTCTGCTGCTA+TGG | - | chr2.2:57748035-57748054 | MS.gene02104:intron | 45.0% | |
TTTCCTTTGCTGCTGCAACT+AGG | + | chr2.2:57748641-57748660 | None:intergenic | 45.0% | |
! | ACTGGGACGCTTATTTCTCA+TGG | - | chr2.2:57747490-57747509 | MS.gene02104:intron | 45.0% |
! | GGTTGACTCCATTTGTTTCC+TGG | + | chr2.2:57748820-57748839 | None:intergenic | 45.0% |
! | TGCTCAAGTTTCTAATGGGC+TGG | - | chr2.2:57748287-57748306 | MS.gene02104:intron | 45.0% |
!! | ACGTGTGGCTTTGTAGAACT+AGG | - | chr2.2:57751384-57751403 | MS.gene02104:CDS | 45.0% |
!! | AGTAACCGGTGTTGCAACAT+AGG | - | chr2.2:57751671-57751690 | MS.gene02104:CDS | 45.0% |
!! | GGTTCGGATTTGGTTGGTTT+AGG | - | chr2.2:57747127-57747146 | MS.gene02104:intron | 45.0% |
!! | GTGGCTTTGTAGAACTAGGT+AGG | - | chr2.2:57751388-57751407 | MS.gene02104:CDS | 45.0% |
!! | TCGGATTTGGTTGGTTTAGG+TGG | - | chr2.2:57747130-57747149 | MS.gene02104:intron | 45.0% |
!! | TTTGGATTCTGGCTCTCTGA+AGG | - | chr2.2:57747654-57747673 | MS.gene02104:intron | 45.0% |
!! | TTTGTTGTTCTCGGCAGCTT+TGG | + | chr2.2:57748418-57748437 | None:intergenic | 45.0% |
!!! | TCCCATGGTTTTAAGTGCAC+TGG | + | chr2.2:57749443-57749462 | None:intergenic | 45.0% |
AACACTTTCTGAGTGGCAGG+AGG | - | chr2.2:57747276-57747295 | MS.gene02104:intron | 50.0% | |
AACGACGTGTACCACCTTCA+TGG | + | chr2.2:57746967-57746986 | None:intergenic | 50.0% | |
ACGACGTGTACCACCTTCAT+GGG | + | chr2.2:57746966-57746985 | None:intergenic | 50.0% | |
AGGAGAATGTGCCGGAAAGA+TGG | - | chr2.2:57747161-57747180 | MS.gene02104:intron | 50.0% | |
ATTTACTTCCCGGAGTCCAG+AGG | + | chr2.2:57750902-57750921 | None:intergenic | 50.0% | |
CAATCTCCTGCTGCAAACTC+CGG | + | chr2.2:57747351-57747370 | None:intergenic | 50.0% | |
CGAGGCAGATGCAGATGAAT+AGG | - | chr2.2:57749657-57749676 | MS.gene02104:intron | 50.0% | |
GTCACAGCAACAACTGACTG+AGG | - | chr2.2:57748065-57748084 | MS.gene02104:intron | 50.0% | |
GTGTAGACTCTTGATCGCTG+AGG | + | chr2.2:57749801-57749820 | None:intergenic | 50.0% | |
TCTTGCAAAGGCTGAAGCAG+AGG | - | chr2.2:57749501-57749520 | MS.gene02104:intron | 50.0% | |
TTGTATCCGGAGTTTGCAGC+AGG | - | chr2.2:57747342-57747361 | MS.gene02104:intron | 50.0% | |
TTTACTTCCCGGAGTCCAGA+GGG | + | chr2.2:57750901-57750920 | None:intergenic | 50.0% | |
! | AGTTCGGGTTCGGATTTGGT+TGG | - | chr2.2:57747121-57747140 | MS.gene02104:intron | 50.0% |
!! | CCGGTGTTGCAACATAGGTT+TGG | - | chr2.2:57751676-57751695 | MS.gene02104:CDS | 50.0% |
!! | GGTTGATCTTTTAGGGGACG+AGG | - | chr2.2:57750531-57750550 | MS.gene02104:CDS | 50.0% |
!! | GTGCACTGGCTTTGTTCTTG+AGG | + | chr2.2:57749429-57749448 | None:intergenic | 50.0% |
AACTGCGGTGTGGCAATCAG+GGG | - | chr2.2:57751029-57751048 | MS.gene02104:CDS | 55.0% | |
AATGGCAGGGTTGAGCTGGT+AGG | + | chr2.2:57751480-57751499 | None:intergenic | 55.0% | |
ACCAGCTCAACCCTGCCATT+CGG | - | chr2.2:57751480-57751499 | MS.gene02104:CDS | 55.0% | |
CAACTGCGGTGTGGCAATCA+GGG | - | chr2.2:57751028-57751047 | MS.gene02104:CDS | 55.0% | |
CTCGGGTCACATGAGCACAA+GGG | + | chr2.2:57749641-57749660 | None:intergenic | 55.0% | |
GGAGGAGCAGGAGTTTCGTT+TGG | - | chr2.2:57747294-57747313 | MS.gene02104:intron | 55.0% | |
TAGGAGGTGGCGACATTTGG+CGG | - | chr2.2:57751723-57751742 | MS.gene02104:CDS | 55.0% | |
TTACTTCCCGGAGTCCAGAG+GGG | + | chr2.2:57750900-57750919 | None:intergenic | 55.0% | |
CCAACTGCGGTGTGGCAATC+AGG | - | chr2.2:57751027-57751046 | MS.gene02104:CDS | 60.0% | |
CCTCGGGTCACATGAGCACA+AGG | + | chr2.2:57749642-57749661 | None:intergenic | 60.0% | |
CCTGATTGCCACACCGCAGT+TGG | + | chr2.2:57751030-57751049 | None:intergenic | 60.0% | |
CCTTGTGCTCATGTGACCCG+AGG | - | chr2.2:57749639-57749658 | MS.gene02104:intron | 60.0% | |
TACTTCCCGGAGTCCAGAGG+GGG | + | chr2.2:57750899-57750918 | None:intergenic | 60.0% | |
TGGGAATCTTGACCCCCCTC+TGG | - | chr2.2:57750883-57750902 | MS.gene02104:CDS | 60.0% | |
TTCTGAGTGGCAGGAGGAGC+AGG | - | chr2.2:57747282-57747301 | MS.gene02104:intron | 60.0% | |
ACTTCCCGGAGTCCAGAGGG+GGG | + | chr2.2:57750898-57750917 | None:intergenic | 65.0% | |
CTTGACCCCCCTCTGGACTC+CGG | - | chr2.2:57750890-57750909 | MS.gene02104:CDS | 65.0% | |
GCAGGGTTGAGCTGGTAGGC+TGG | + | chr2.2:57751476-57751495 | None:intergenic | 65.0% | |
GCCGAATGGCAGGGTTGAGC+TGG | + | chr2.2:57751484-57751503 | None:intergenic | 65.0% | |
TTGACCCCCCTCTGGACTCC+GGG | - | chr2.2:57750891-57750910 | MS.gene02104:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 57746641 | 57751942 | 57746641 | ID=MS.gene02104 |
chr2.2 | mRNA | 57746641 | 57751942 | 57746641 | ID=MS.gene02104.t1;Parent=MS.gene02104 |
chr2.2 | exon | 57749661 | 57751942 | 57749661 | ID=MS.gene02104.t1.exon1;Parent=MS.gene02104.t1 |
chr2.2 | CDS | 57749661 | 57751942 | 57749661 | ID=cds.MS.gene02104.t1;Parent=MS.gene02104.t1 |
chr2.2 | exon | 57749061 | 57749187 | 57749061 | ID=MS.gene02104.t1.exon2;Parent=MS.gene02104.t1 |
chr2.2 | CDS | 57749061 | 57749187 | 57749061 | ID=cds.MS.gene02104.t1;Parent=MS.gene02104.t1 |
chr2.2 | exon | 57747950 | 57748051 | 57747950 | ID=MS.gene02104.t1.exon3;Parent=MS.gene02104.t1 |
chr2.2 | CDS | 57747950 | 57748051 | 57747950 | ID=cds.MS.gene02104.t1;Parent=MS.gene02104.t1 |
chr2.2 | exon | 57746641 | 57746703 | 57746641 | ID=MS.gene02104.t1.exon4;Parent=MS.gene02104.t1 |
chr2.2 | CDS | 57746641 | 57746703 | 57746641 | ID=cds.MS.gene02104.t1;Parent=MS.gene02104.t1 |
Gene Sequence |
Protein sequence |