Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021672.t1 | XP_003621144.1 | 99 | 672 | 7 | 0 | 1 | 672 | 1 | 672 | 0.00E+00 | 1305 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021672.t1 | B9RUN8 | 80.1 | 678 | 124 | 4 | 1 | 672 | 1 | 673 | 3.3e-312 | 1071.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021672.t1 | G7KZV0 | 99.0 | 672 | 7 | 0 | 1 | 672 | 1 | 672 | 0.0e+00 | 1305.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene021672 | MS.gene06336 | PPI |
MS.gene021672 | MS.gene013177 | PPI |
MS.gene021672 | MS.gene013250 | PPI |
MS.gene40954 | MS.gene021672 | PPI |
MS.gene021672 | MS.gene41663 | PPI |
MS.gene021672 | MS.gene049222 | PPI |
MS.gene021672 | MS.gene06250 | PPI |
MS.gene021672 | MS.gene055526 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021672.t1 | MTR_7g009740 | 98.958 | 672 | 7 | 0 | 1 | 672 | 1 | 672 | 0.0 | 1373 |
MS.gene021672.t1 | MTR_3g097250 | 51.314 | 647 | 292 | 5 | 34 | 671 | 41 | 673 | 0.0 | 655 |
MS.gene021672.t1 | MTR_1g052535 | 25.763 | 590 | 344 | 21 | 7 | 554 | 15 | 552 | 1.62e-33 | 137 |
MS.gene021672.t1 | MTR_1g052535 | 31.746 | 315 | 169 | 10 | 7 | 293 | 15 | 311 | 3.17e-29 | 122 |
MS.gene021672.t1 | MTR_4g079360 | 31.907 | 257 | 133 | 5 | 64 | 296 | 54 | 292 | 2.17e-28 | 121 |
MS.gene021672.t1 | MTR_2g069320 | 41.509 | 159 | 83 | 4 | 54 | 208 | 10 | 162 | 1.33e-25 | 113 |
MS.gene021672.t1 | MTR_2g069050 | 42.466 | 146 | 78 | 3 | 67 | 208 | 19 | 162 | 3.27e-24 | 108 |
MS.gene021672.t1 | MTR_2g069310 | 41.667 | 144 | 82 | 2 | 67 | 208 | 19 | 162 | 7.91e-24 | 107 |
MS.gene021672.t1 | MTR_1g048000 | 41.781 | 146 | 79 | 3 | 67 | 208 | 19 | 162 | 1.59e-23 | 106 |
MS.gene021672.t1 | MTR_7g044770 | 36.145 | 166 | 81 | 3 | 65 | 222 | 60 | 208 | 3.67e-22 | 102 |
MS.gene021672.t1 | MTR_4g119340 | 37.241 | 145 | 73 | 3 | 67 | 208 | 14 | 143 | 1.36e-19 | 94.4 |
MS.gene021672.t1 | MTR_4g116430 | 34.899 | 149 | 83 | 3 | 64 | 208 | 136 | 274 | 1.12e-17 | 88.2 |
MS.gene021672.t1 | MTR_2g020660 | 36.747 | 166 | 80 | 5 | 65 | 222 | 53 | 201 | 8.52e-17 | 85.1 |
MS.gene021672.t1 | MTR_4g101750 | 31.285 | 179 | 98 | 4 | 38 | 212 | 68 | 225 | 6.18e-15 | 79.0 |
MS.gene021672.t1 | MTR_4g101750 | 31.285 | 179 | 98 | 4 | 38 | 212 | 68 | 225 | 8.22e-15 | 78.6 |
MS.gene021672.t1 | MTR_2g064840 | 25.547 | 274 | 164 | 7 | 47 | 311 | 480 | 722 | 2.02e-11 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021672.t1 | AT5G39900 | 77.745 | 674 | 137 | 6 | 1 | 672 | 1 | 663 | 0.0 | 1063 |
MS.gene021672.t1 | AT5G08650 | 51.387 | 613 | 284 | 4 | 59 | 671 | 78 | 676 | 0.0 | 619 |
MS.gene021672.t1 | AT5G08650 | 49.088 | 548 | 265 | 4 | 59 | 606 | 78 | 611 | 0.0 | 536 |
MS.gene021672.t1 | AT5G13650 | 26.439 | 556 | 323 | 21 | 34 | 554 | 49 | 553 | 3.01e-37 | 148 |
MS.gene021672.t1 | AT5G13650 | 26.923 | 520 | 299 | 19 | 67 | 554 | 82 | 552 | 3.94e-37 | 148 |
MS.gene021672.t1 | AT2G31060 | 26.337 | 505 | 291 | 14 | 60 | 528 | 52 | 511 | 1.10e-30 | 128 |
MS.gene021672.t1 | AT2G31060 | 26.139 | 505 | 296 | 14 | 60 | 528 | 52 | 515 | 3.32e-29 | 124 |
MS.gene021672.t1 | AT1G56070 | 40.411 | 146 | 81 | 3 | 67 | 208 | 19 | 162 | 1.55e-23 | 106 |
MS.gene021672.t1 | AT1G56070 | 40.411 | 146 | 81 | 3 | 67 | 208 | 19 | 162 | 1.55e-23 | 106 |
MS.gene021672.t1 | AT1G56070 | 40.411 | 146 | 81 | 3 | 67 | 208 | 19 | 162 | 1.55e-23 | 106 |
MS.gene021672.t1 | AT3G12915 | 40.972 | 144 | 83 | 2 | 67 | 208 | 19 | 162 | 6.06e-23 | 104 |
MS.gene021672.t1 | AT3G22980 | 40.000 | 145 | 69 | 2 | 67 | 208 | 9 | 138 | 2.96e-21 | 99.8 |
MS.gene021672.t1 | AT3G22980 | 40.000 | 145 | 69 | 2 | 67 | 208 | 9 | 138 | 2.96e-21 | 99.8 |
MS.gene021672.t1 | AT3G22980 | 40.000 | 145 | 69 | 2 | 67 | 208 | 9 | 138 | 2.96e-21 | 99.8 |
MS.gene021672.t1 | AT1G06220 | 38.255 | 149 | 78 | 3 | 64 | 208 | 135 | 273 | 2.02e-20 | 97.1 |
MS.gene021672.t1 | AT1G06220 | 38.255 | 149 | 78 | 3 | 64 | 208 | 135 | 273 | 2.02e-20 | 97.1 |
MS.gene021672.t1 | AT1G06220 | 38.255 | 149 | 78 | 3 | 64 | 208 | 135 | 273 | 2.02e-20 | 97.1 |
MS.gene021672.t1 | AT2G45030 | 34.146 | 164 | 83 | 3 | 67 | 222 | 65 | 211 | 6.61e-20 | 95.1 |
MS.gene021672.t1 | AT1G45332 | 34.146 | 164 | 83 | 3 | 67 | 222 | 65 | 211 | 6.61e-20 | 95.1 |
MS.gene021672.t1 | AT5G25230 | 36.913 | 149 | 80 | 3 | 64 | 208 | 121 | 259 | 6.44e-19 | 92.0 |
MS.gene021672.t1 | AT5G25230 | 36.913 | 149 | 80 | 3 | 64 | 208 | 121 | 259 | 6.44e-19 | 92.0 |
MS.gene021672.t1 | AT1G62750 | 32.886 | 149 | 80 | 3 | 68 | 212 | 97 | 229 | 6.23e-14 | 75.9 |
MS.gene021672.t1 | AT4G11160 | 26.070 | 257 | 148 | 6 | 47 | 296 | 206 | 427 | 2.94e-13 | 73.6 |
MS.gene021672.t1 | AT4G11160 | 26.070 | 257 | 148 | 6 | 47 | 296 | 206 | 427 | 3.00e-13 | 73.6 |
MS.gene021672.t1 | AT4G11160 | 26.070 | 257 | 148 | 6 | 47 | 296 | 204 | 425 | 3.29e-13 | 73.6 |
Find 147 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTGATCCCGACCGTGTTAA+AGG | 0.211297 | 7.4:+89588691 | MS.gene021672:CDS |
ATCAATAATGGCTTTCTCTT+TGG | 0.231245 | 7.4:-89587042 | None:intergenic |
CCTACTGGAATCTTGTTTAC+TGG | 0.242995 | 7.4:+89589015 | MS.gene021672:CDS |
ATCTCCAATGCGTGCCTCTT+TGG | 0.244319 | 7.4:-89589073 | None:intergenic |
CTTTCTCTTTGGTGTTGTTT+TGG | 0.269768 | 7.4:-89587031 | None:intergenic |
GTGGATGTGGAACCTCTTCC+AGG | 0.288978 | 7.4:+89589120 | MS.gene021672:CDS |
TTGCTAACATCGGCTAAAAC+TGG | 0.312340 | 7.4:+89588754 | MS.gene021672:CDS |
TACACGAAAGAAGAAGCTTT+TGG | 0.312536 | 7.4:+89594336 | MS.gene021672:CDS |
CTGCTCTAGGTCTAGGGTTC+AGG | 0.327618 | 7.4:+89589847 | MS.gene021672:CDS |
CTCTTTGGTTGTCCGCATTC+CGG | 0.332074 | 7.4:-89589058 | None:intergenic |
TCAGTATCTTGATAAATTGC+AGG | 0.349168 | 7.4:+89587193 | MS.gene021672:CDS |
ACGAAACCTTCAATAGTTCA+TGG | 0.351084 | 7.4:-89594426 | None:intergenic |
TGCTTGTCAGGGCGTGCTTT+TGG | 0.352582 | 7.4:+89588558 | MS.gene021672:CDS |
TGATCGGTTGTTGGAACTTA+CGG | 0.358270 | 7.4:+89587142 | MS.gene021672:CDS |
TCAGAATACTCATAGATATA+AGG | 0.362737 | 7.4:-89590882 | None:intergenic |
TGCCATGTTGCTGTCGTTGA+TGG | 0.371153 | 7.4:+89588901 | MS.gene021672:CDS |
CTATGCATCATTTGATTATG+AGG | 0.373945 | 7.4:+89592849 | MS.gene021672:CDS |
CATCCTGAACTTACGCCTAC+TGG | 0.374824 | 7.4:+89589000 | MS.gene021672:CDS |
TGTTTGTGTAAACAGGAATA+TGG | 0.376872 | 7.4:+89590828 | MS.gene021672:intron |
GAGGTCACTAGCTGCTTGTC+AGG | 0.379245 | 7.4:+89588546 | MS.gene021672:CDS |
TGGGTTATTCTACTTGATAA+AGG | 0.383459 | 7.4:-89586963 | None:intergenic |
GGGTTATTCTACTTGATAAA+GGG | 0.385895 | 7.4:-89586962 | None:intergenic |
GATCGGTTGTTGGAACTTAC+GGG | 0.394497 | 7.4:+89587143 | MS.gene021672:CDS |
GAGCGTATACCTCCGCCTCC+TGG | 0.396452 | 7.4:+89588811 | MS.gene021672:CDS |
GATCAAACATCGATTTCAAT+TGG | 0.397668 | 7.4:-89588714 | None:intergenic |
TCATATGAAGCTATGGATAT+AGG | 0.398593 | 7.4:+89588970 | MS.gene021672:CDS |
GAGAAATTTCTCACAAGCTC+TGG | 0.408314 | 7.4:-89587080 | None:intergenic |
AGCGTTCCATGAACTATTGA+AGG | 0.411225 | 7.4:+89594420 | MS.gene021672:CDS |
CAAGTTGGTTACGTTATAAC+CGG | 0.412569 | 7.4:+89589039 | MS.gene021672:CDS |
TACTCTTGCTGATCGGTTGT+TGG | 0.416593 | 7.4:+89587133 | MS.gene021672:CDS |
TGTCTTAGGTGGAGAGAGAA+AGG | 0.419115 | 7.4:+89588377 | MS.gene021672:intron |
CTTCAAAGCAGCAAAACATA+TGG | 0.421700 | 7.4:+89589713 | MS.gene021672:CDS |
CACCCTTCTCTCTGAGCGTA+GGG | 0.424744 | 7.4:+89591196 | MS.gene021672:CDS |
ACTAGCACTGCTCTAGGTCT+AGG | 0.427464 | 7.4:+89589840 | MS.gene021672:CDS |
CAGGCTACCACTCGTTGCTT+GGG | 0.430966 | 7.4:-89591023 | None:intergenic |
ACAGGCTACCACTCGTTGCT+TGG | 0.433082 | 7.4:-89591024 | None:intergenic |
GAAGTATCGTCTTCCTTTGA+GGG | 0.433212 | 7.4:+89592780 | MS.gene021672:CDS |
AAACTTGATATTCTCTTGAA+TGG | 0.433950 | 7.4:+89593617 | MS.gene021672:CDS |
AATGATGATGATTCTAAAGA+TGG | 0.436582 | 7.4:+89588451 | MS.gene021672:CDS |
GTACTGACTCAAATCAATAA+TGG | 0.436662 | 7.4:-89587054 | None:intergenic |
TGCTAACATCGGCTAAAACT+GGG | 0.444983 | 7.4:+89588755 | MS.gene021672:CDS |
TGAAGTATCGTCTTCCTTTG+AGG | 0.445367 | 7.4:+89592779 | MS.gene021672:CDS |
ACAGAAAAGTGCACGTGTAA+TGG | 0.445676 | 7.4:-89586997 | None:intergenic |
GCAACGAGTGGTAGCCTGTT+GGG | 0.445716 | 7.4:+89591028 | MS.gene021672:CDS |
GTGTAATGGAAAATCTTTGA+TGG | 0.449154 | 7.4:-89586983 | None:intergenic |
TTCTTTAGTAACTGAGACAC+TGG | 0.451469 | 7.4:-89589817 | None:intergenic |
TACTAAAAGCACTGTGGATG+TGG | 0.454084 | 7.4:+89589107 | MS.gene021672:CDS |
ATCATTGCTCATGTTGATCA+TGG | 0.456319 | 7.4:+89587104 | MS.gene021672:CDS |
TCAGAGAGAAGGGTGATAAC+AGG | 0.457080 | 7.4:-89591188 | None:intergenic |
TAAGATTTCTTCGGCGGCCA+CGG | 0.457579 | 7.4:+89588942 | MS.gene021672:CDS |
CGTTGATGGTGCCCTGCGCA+AGG | 0.466416 | 7.4:+89588915 | MS.gene021672:CDS |
GTCTTAGGTGGAGAGAGAAA+GGG | 0.466839 | 7.4:+89588378 | MS.gene021672:intron |
AATGTTCTTGCCAAGTGTTA+TGG | 0.470456 | 7.4:+89594304 | MS.gene021672:CDS |
TATTACTGTGGGTTCCCAAC+AGG | 0.471236 | 7.4:-89591042 | None:intergenic |
TTGATGGTGCCCTGCGCAAG+GGG | 0.472833 | 7.4:+89588917 | MS.gene021672:CDS |
TGGAGTACTCGTTCATTGAC+AGG | 0.474578 | 7.4:+89591228 | MS.gene021672:CDS |
AATTGCTAAGTTAGATTCAA+AGG | 0.477085 | 7.4:-89588635 | None:intergenic |
TGATCTATCTTATTTATGAC+AGG | 0.477963 | 7.4:-89588661 | None:intergenic |
TTGGTTGTTGATGCTGCTCA+AGG | 0.478306 | 7.4:+89588577 | MS.gene021672:CDS |
AAGATTTCTTCGGCGGCCAC+GGG | 0.480686 | 7.4:+89588943 | MS.gene021672:CDS |
CAGTTATCAACCATCTGATC+TGG | 0.482709 | 7.4:+89593592 | MS.gene021672:intron |
ATATCGTGTTGGGCGTGAAT+TGG | 0.484300 | 7.4:+89593685 | MS.gene021672:CDS |
AATTGGCCTTTAACACGGTC+GGG | 0.487568 | 7.4:-89588697 | None:intergenic |
GGATTAGACGGTAATGCAGC+AGG | 0.489291 | 7.4:-89591002 | None:intergenic |
ACTCGAAATCATATCGTGTT+GGG | 0.489815 | 7.4:+89593675 | MS.gene021672:CDS |
TTGTTTGATCTAAGGTATGT+TGG | 0.494037 | 7.4:+89591164 | MS.gene021672:intron |
ATCTTGTTTACTGGACAAGT+TGG | 0.500611 | 7.4:+89589024 | MS.gene021672:CDS |
GGTATACGCTCTATAACTGC+TGG | 0.507876 | 7.4:-89588799 | None:intergenic |
GGCACTATTAAGAAAGGACT+TGG | 0.508945 | 7.4:+89587164 | MS.gene021672:CDS |
ATTCCAGTAGGCGTAAGTTC+AGG | 0.509737 | 7.4:-89589003 | None:intergenic |
AATTGAAGAAAGTCATTGAC+AGG | 0.511476 | 7.4:+89593714 | MS.gene021672:CDS |
TCAAAATCAGATCCATCAGC+TGG | 0.514059 | 7.4:-89589753 | None:intergenic |
TAATCATACAAGCCGCCATT+GGG | 0.514147 | 7.4:+89593845 | MS.gene021672:CDS |
AACTCGAAATCATATCGTGT+TGG | 0.515260 | 7.4:+89593674 | MS.gene021672:CDS |
TCACCCTTCTCTCTGAGCGT+AGG | 0.518017 | 7.4:+89591195 | MS.gene021672:CDS |
AAAGAAACTAGCACTGCTCT+AGG | 0.519512 | 7.4:+89589834 | MS.gene021672:CDS |
AGCGTATACCTCCGCCTCCT+GGG | 0.519604 | 7.4:+89588812 | MS.gene021672:CDS |
TCTTAGGTGGAGAGAGAAAG+GGG | 0.520345 | 7.4:+89588379 | MS.gene021672:intron |
TATATCTATGAGTATTCTGA+TGG | 0.525247 | 7.4:+89590885 | MS.gene021672:CDS |
GGGTAAATCATATGAAGCTA+TGG | 0.531790 | 7.4:+89588963 | MS.gene021672:CDS |
TCACTCTTCCCAGGAGGCGG+AGG | 0.532337 | 7.4:-89588820 | None:intergenic |
AAATTTCTCACAAGCTCTGG+TGG | 0.532728 | 7.4:-89587077 | None:intergenic |
CAATTGGCCTTTAACACGGT+CGG | 0.536159 | 7.4:-89588698 | None:intergenic |
TCGTGTTGGGCGTGAATTGG+TGG | 0.536800 | 7.4:+89593688 | MS.gene021672:CDS |
CACCCCTACGCTCAGAGAGA+AGG | 0.539680 | 7.4:-89591199 | None:intergenic |
TGTAATGGAAAATCTTTGAT+GGG | 0.540161 | 7.4:-89586982 | None:intergenic |
GATTCACTCTTCCCAGGAGG+CGG | 0.540294 | 7.4:-89588823 | None:intergenic |
GATGTTAGCAATGCATCACT+CGG | 0.543356 | 7.4:-89588742 | None:intergenic |
ATTTCAATTGGCCTTTAACA+CGG | 0.543668 | 7.4:-89588702 | None:intergenic |
TCTATAACAATTTCCCTCAA+AGG | 0.544107 | 7.4:-89592793 | None:intergenic |
CTAGCACTGCTCTAGGTCTA+GGG | 0.546049 | 7.4:+89589841 | MS.gene021672:CDS |
TGAGCGTAGGGGTGAACAGT+TGG | 0.547250 | 7.4:+89591208 | MS.gene021672:CDS |
CGCTTCTTGTGGTACATCAA+CGG | 0.548934 | 7.4:-89594401 | None:intergenic |
GTTGATGGTGCCCTGCGCAA+GGG | 0.550686 | 7.4:+89588916 | MS.gene021672:CDS |
CTTACGGGCACTATTAAGAA+AGG | 0.551233 | 7.4:+89587158 | MS.gene021672:CDS |
TTGAATCTTATTGACACACC+TGG | 0.552080 | 7.4:+89588496 | MS.gene021672:CDS |
TCAAGTTTCACCAGATCAGA+TGG | 0.552288 | 7.4:-89593602 | None:intergenic |
ATAATCATACAAGCCGCCAT+TGG | 0.562406 | 7.4:+89593844 | MS.gene021672:CDS |
ATGTAAGCTTCTCTATTGCA+TGG | 0.563360 | 7.4:-89589785 | None:intergenic |
TAACTGAAATCTACATGCCC+AGG | 0.564247 | 7.4:-89588514 | None:intergenic |
ACAACCAAAGAGGCACGCAT+TGG | 0.568702 | 7.4:+89589069 | MS.gene021672:CDS |
AATGAAGATTCACTCTTCCC+AGG | 0.572107 | 7.4:-89588829 | None:intergenic |
ACCCCTACGCTCAGAGAGAA+GGG | 0.575490 | 7.4:-89591198 | None:intergenic |
TGATGATTCTAAAGATGGAA+AGG | 0.575626 | 7.4:+89588456 | MS.gene021672:CDS |
TGATTTCGAGTTATGAACAA+TGG | 0.578989 | 7.4:-89593663 | None:intergenic |
ATCACCGCTTTACCTGGAAG+AGG | 0.580633 | 7.4:-89589132 | None:intergenic |
CCAGTAAACAAGATTCCAGT+AGG | 0.583432 | 7.4:-89589015 | None:intergenic |
TGTGCAAGAGCTTACTCACT+AGG | 0.587619 | 7.4:-89591080 | None:intergenic |
ACATCGGCTAAAACTGGGGT+GGG | 0.588454 | 7.4:+89588760 | MS.gene021672:CDS |
ACTCGTTGCTTGGGATTAGA+CGG | 0.592284 | 7.4:-89591014 | None:intergenic |
CTAAGTTAGATTCAAAGGCA+AGG | 0.592310 | 7.4:-89588630 | None:intergenic |
AGCAACGAGTGGTAGCCTGT+TGG | 0.593264 | 7.4:+89591027 | MS.gene021672:CDS |
GATATAAGGCACGGTAGGAA+CGG | 0.596165 | 7.4:-89590868 | None:intergenic |
AATATCACCACCATAACACT+TGG | 0.596925 | 7.4:-89594314 | None:intergenic |
AACATCGGCTAAAACTGGGG+TGG | 0.597452 | 7.4:+89588759 | MS.gene021672:CDS |
AACTATAGTAGCTATTACTG+TGG | 0.603566 | 7.4:-89591054 | None:intergenic |
TCATAGATATAAGGCACGGT+AGG | 0.607140 | 7.4:-89590873 | None:intergenic |
GAAAATCTACTCTTGCTGAT+CGG | 0.612484 | 7.4:+89587126 | MS.gene021672:CDS |
TCTATGAGTATTCTGATGGA+AGG | 0.613407 | 7.4:+89590889 | MS.gene021672:CDS |
ACTATAGTAGCTATTACTGT+GGG | 0.615089 | 7.4:-89591053 | None:intergenic |
AGTTCATGGAACGCTTCTTG+TGG | 0.617418 | 7.4:-89594412 | None:intergenic |
GGAGAGAGAAAGGGGAATCA+CGG | 0.618895 | 7.4:+89588387 | MS.gene021672:CDS |
GCTAACATCGGCTAAAACTG+GGG | 0.618963 | 7.4:+89588756 | MS.gene021672:CDS |
AGGTCACTAGCTGCTTGTCA+GGG | 0.619119 | 7.4:+89588547 | MS.gene021672:CDS |
CACCATCAACGACAGCAACA+TGG | 0.620893 | 7.4:-89588903 | None:intergenic |
TCTCTTGAATGGTCAAGCAG+TGG | 0.623026 | 7.4:+89593628 | MS.gene021672:CDS |
ATTTCAGTTATGAAGTGTCG+AGG | 0.630243 | 7.4:+89588527 | MS.gene021672:CDS |
ACACGGTCGGGATCAGCAGT+CGG | 0.632485 | 7.4:-89588685 | None:intergenic |
TGAATCTTATTGACACACCT+GGG | 0.636453 | 7.4:+89588497 | MS.gene021672:CDS |
GAATTGAAGAGTATAACCTC+AGG | 0.636482 | 7.4:+89592826 | MS.gene021672:CDS |
AATTTCTCACAAGCTCTGGT+GGG | 0.640012 | 7.4:-89587076 | None:intergenic |
TGCAATTTATCAAGATACTG+AGG | 0.641130 | 7.4:-89587191 | None:intergenic |
CGGAATGCGGACAACCAAAG+AGG | 0.645056 | 7.4:+89589059 | MS.gene021672:CDS |
TGGTCAAGCAGTGGATGCAA+TGG | 0.648929 | 7.4:+89593637 | MS.gene021672:CDS |
AGCTTCATATGATTTACCCG+TGG | 0.651701 | 7.4:-89588959 | None:intergenic |
TGATGGTGCCCTGCGCAAGG+GGG | 0.653669 | 7.4:+89588918 | MS.gene021672:CDS |
GTCTAATCCCAAGCAACGAG+TGG | 0.653785 | 7.4:+89591016 | MS.gene021672:CDS |
ATGTTAGCAATGCATCACTC+GGG | 0.657087 | 7.4:-89588741 | None:intergenic |
ATCAAATGATGCATAGCCTG+AGG | 0.666254 | 7.4:-89592842 | None:intergenic |
ACCCTTCTCTCTGAGCGTAG+GGG | 0.674829 | 7.4:+89591197 | MS.gene021672:CDS |
GTTACGTTATAACCGGAATG+CGG | 0.676457 | 7.4:+89589046 | MS.gene021672:CDS |
GTTCTTGCCAAGTGTTATGG+TGG | 0.678954 | 7.4:+89594307 | MS.gene021672:CDS |
GCACTATTAAGAAAGGACTT+GGG | 0.682333 | 7.4:+89587165 | MS.gene021672:CDS |
GAGTGATGCATTGCTAACAT+CGG | 0.698424 | 7.4:+89588744 | MS.gene021672:CDS |
ATACTCATAGATATAAGGCA+CGG | 0.704357 | 7.4:-89590877 | None:intergenic |
GAAGATTCACTCTTCCCAGG+AGG | 0.724252 | 7.4:-89588826 | None:intergenic |
TTACCATACTAAAAGCACTG+TGG | 0.769440 | 7.4:+89589101 | MS.gene021672:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 89586891 | 89594450 | 89586891 | ID=MS.gene021672 |
chr7.4 | mRNA | 89586891 | 89594450 | 89586891 | ID=MS.gene021672.t1;Parent=MS.gene021672 |
chr7.4 | exon | 89586891 | 89587214 | 89586891 | ID=MS.gene021672.t1.exon1;Parent=MS.gene021672.t1 |
chr7.4 | CDS | 89586891 | 89587214 | 89586891 | ID=cds.MS.gene021672.t1;Parent=MS.gene021672.t1 |
chr7.4 | exon | 89588385 | 89589141 | 89588385 | ID=MS.gene021672.t1.exon2;Parent=MS.gene021672.t1 |
chr7.4 | CDS | 89588385 | 89589141 | 89588385 | ID=cds.MS.gene021672.t1;Parent=MS.gene021672.t1 |
chr7.4 | exon | 89589712 | 89589868 | 89589712 | ID=MS.gene021672.t1.exon3;Parent=MS.gene021672.t1 |
chr7.4 | CDS | 89589712 | 89589868 | 89589712 | ID=cds.MS.gene021672.t1;Parent=MS.gene021672.t1 |
chr7.4 | exon | 89589982 | 89590036 | 89589982 | ID=MS.gene021672.t1.exon4;Parent=MS.gene021672.t1 |
chr7.4 | CDS | 89589982 | 89590036 | 89589982 | ID=cds.MS.gene021672.t1;Parent=MS.gene021672.t1 |
chr7.4 | exon | 89590843 | 89590910 | 89590843 | ID=MS.gene021672.t1.exon5;Parent=MS.gene021672.t1 |
chr7.4 | CDS | 89590843 | 89590910 | 89590843 | ID=cds.MS.gene021672.t1;Parent=MS.gene021672.t1 |
chr7.4 | exon | 89590983 | 89591087 | 89590983 | ID=MS.gene021672.t1.exon6;Parent=MS.gene021672.t1 |
chr7.4 | CDS | 89590983 | 89591087 | 89590983 | ID=cds.MS.gene021672.t1;Parent=MS.gene021672.t1 |
chr7.4 | exon | 89591178 | 89591249 | 89591178 | ID=MS.gene021672.t1.exon7;Parent=MS.gene021672.t1 |
chr7.4 | CDS | 89591178 | 89591249 | 89591178 | ID=cds.MS.gene021672.t1;Parent=MS.gene021672.t1 |
chr7.4 | exon | 89592765 | 89592878 | 89592765 | ID=MS.gene021672.t1.exon8;Parent=MS.gene021672.t1 |
chr7.4 | CDS | 89592765 | 89592878 | 89592765 | ID=cds.MS.gene021672.t1;Parent=MS.gene021672.t1 |
chr7.4 | exon | 89593595 | 89593735 | 89593595 | ID=MS.gene021672.t1.exon9;Parent=MS.gene021672.t1 |
chr7.4 | CDS | 89593595 | 89593735 | 89593595 | ID=cds.MS.gene021672.t1;Parent=MS.gene021672.t1 |
chr7.4 | exon | 89593831 | 89593890 | 89593831 | ID=MS.gene021672.t1.exon10;Parent=MS.gene021672.t1 |
chr7.4 | CDS | 89593831 | 89593890 | 89593831 | ID=cds.MS.gene021672.t1;Parent=MS.gene021672.t1 |
chr7.4 | exon | 89594285 | 89594450 | 89594285 | ID=MS.gene021672.t1.exon11;Parent=MS.gene021672.t1 |
chr7.4 | CDS | 89594285 | 89594450 | 89594285 | ID=cds.MS.gene021672.t1;Parent=MS.gene021672.t1 |
Gene Sequence |
Protein sequence |