AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02177

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02177.t1 MTR_2g009220 98.060 567 8 2 1 564 1 567 0.0 1097
MS.gene02177.t1 MTR_4g065007 50.529 473 230 3 93 564 88 557 8.20e-158 462
MS.gene02177.t1 MTR_4g081600 37.759 241 125 4 339 564 410 640 2.24e-37 148
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02177.t1 AT5G64290 74.912 570 130 5 1 564 1 563 0.0 817
MS.gene02177.t1 AT5G64280 63.796 569 181 4 1 564 1 549 0.0 719
MS.gene02177.t1 AT5G12860 46.751 554 267 6 28 564 15 557 8.06e-159 465
MS.gene02177.t1 AT5G12860 46.835 553 266 6 28 563 15 556 1.14e-158 465

Find 159 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGTCTCTTTGTGGATCTT+TGG 0.181386 2.1:+73721018 MS.gene02177:CDS
CCCTTGGGTTACGTGGTTTA+AGG 0.188381 2.1:+73720822 MS.gene02177:CDS
GGGTTTGTGAAGACGGGTTT+AGG 0.221874 2.1:+73719387 MS.gene02177:CDS
TCTGGTGTGTCTTTAATTTC+AGG 0.227085 2.1:-73720910 None:intergenic
CTTGAGCTGGCCGGCTTCAT+TGG 0.228307 2.1:+73722371 MS.gene02177:CDS
CTTTGCACCTTGAAGAATAT+TGG 0.229477 2.1:-73719091 None:intergenic
TCTTATTCAGAACCAATTTC+AGG 0.239407 2.1:+73719620 MS.gene02177:CDS
GGCTTCATTGGCTGTTCTTC+AGG 0.266545 2.1:+73722383 MS.gene02177:CDS
CAGTCTCTTTGTGGATCTTT+GGG 0.272268 2.1:+73721019 MS.gene02177:CDS
CTCTTAGAGGAGGGACTATT+AGG 0.283627 2.1:-73719585 None:intergenic
GGGGAGGTGTTGGCTCTATC+TGG 0.287380 2.1:+73723098 MS.gene02177:CDS
TTTGTCATTTCAATCTTGAT+TGG 0.290566 2.1:+73719123 MS.gene02177:CDS
CCCGTTGCCGGTTGGAGCTT+GGG 0.292132 2.1:+73719248 MS.gene02177:CDS
TTATCAATACTCCTCGTCTT+AGG 0.295196 2.1:+73722195 MS.gene02177:CDS
GCAGCCAGGGCAGGTGCCTC+TGG 0.296528 2.1:-73720928 None:intergenic
TGCTTCTTGCAGTCTCTTTG+TGG 0.314222 2.1:+73721010 MS.gene02177:CDS
GCCCGTTGCCGGTTGGAGCT+TGG 0.316064 2.1:+73719247 MS.gene02177:CDS
AGTAAATCCAAACCTGAAAT+TGG 0.316565 2.1:-73719632 None:intergenic
TGCCCTGGCTGCAAAGAAAC+TGG 0.325452 2.1:+73720939 MS.gene02177:CDS
TTAAATTAGCACAGGAGCTT+GGG 0.329855 2.1:+73720785 MS.gene02177:CDS
ACTCTCGCAGCGCTTGCTTT+AGG 0.336598 2.1:+73722510 MS.gene02177:CDS
AAGGTTAAAGGTTGAAACTT+TGG 0.337183 2.1:-73718998 None:intergenic
AATTAGCATGAATTGGGAAA+TGG 0.340431 2.1:-73719032 None:intergenic
AGTGAAAGTGACTTAATAAT+AGG 0.342395 2.1:-73719546 None:intergenic
TTTGCACCTTGAAGAATATT+GGG 0.344765 2.1:-73719090 None:intergenic
CCTTGTGTTAAGCCCGTTGC+CGG 0.345696 2.1:+73719236 MS.gene02177:CDS
GAAAAGAGCGCTGGAGTTAC+CGG 0.347211 2.1:-73720731 None:intergenic
GCCCAGTCTGGCTTGCAAAA+AGG 0.352898 2.1:-73722428 None:intergenic
AGTACTTTAGGACTTTCTTA+TGG 0.358141 2.1:+73719450 MS.gene02177:CDS
GGAGTTGAATTAGCATGAAT+TGG 0.359792 2.1:-73719039 None:intergenic
CATTTATTAATGCTGTCATC+TGG 0.360369 2.1:+73723077 MS.gene02177:CDS
TCGTCTTAGGAGTCCTTGAC+TGG 0.360749 2.1:+73722208 MS.gene02177:CDS
CGCTCGCGGGTTTGTGAAGA+CGG 0.361497 2.1:+73719380 MS.gene02177:CDS
GGTGTAACTTCAACTGGTTT+AGG 0.377702 2.1:-73719168 None:intergenic
GGGTGGTAATTTCAAACCCT+TGG 0.378058 2.1:+73720806 MS.gene02177:CDS
GCTTGAGGTGTAACTTCAAC+TGG 0.380126 2.1:-73719174 None:intergenic
ATTGAAATGACAAAAGGAAT+TGG 0.380530 2.1:-73719114 None:intergenic
ATTAGCATGAATTGGGAAAT+GGG 0.382323 2.1:-73719031 None:intergenic
CCCAAGCTCCAACCGGCAAC+GGG 0.382342 2.1:-73719248 None:intergenic
TCTTGATTGGTCTCATTGTA+AGG 0.385380 2.1:+73719136 MS.gene02177:CDS
GGTTTGTGAAGACGGGTTTA+GGG 0.387906 2.1:+73719388 MS.gene02177:CDS
TCAAAACCCAATATTCTTCA+AGG 0.391349 2.1:+73719084 MS.gene02177:CDS
AAAAGCTCCCAATCTCTTAG+AGG 0.398809 2.1:-73719598 None:intergenic
TGGATGGGGAAGAGTACTTT+AGG 0.402380 2.1:+73719438 MS.gene02177:CDS
CAATCCCAAGGTTTGTCAAC+TGG 0.407857 2.1:-73722302 None:intergenic
GTTTGCCATTCTAGTGGGTA+TGG 0.411337 2.1:+73722275 MS.gene02177:CDS
CAAGCCAGACTGGGCATGTA+GGG 0.411568 2.1:+73722436 MS.gene02177:CDS
TTGTGACCACGGATGTTGTC+AGG 0.418201 2.1:-73719281 None:intergenic
CTTCCTGATATATTCAAAAC+GGG 0.423650 2.1:+73723043 MS.gene02177:CDS
AGTTTCTTTGCAGCCAGGGC+AGG 0.427635 2.1:-73720937 None:intergenic
CTTGCCATGCATAGGGCAGC+TGG 0.433935 2.1:+73722477 MS.gene02177:CDS
TAGTCCCTCCTCTAAGAGAT+TGG 0.440123 2.1:+73719590 MS.gene02177:CDS
GGTCAAGCTGCTGTATACTA+TGG 0.440740 2.1:+73722576 MS.gene02177:CDS
TTCGATCGTTCTCCTTGAGC+TGG 0.440822 2.1:+73722358 MS.gene02177:CDS
AGAAGGATTGTGATGATTTG+AGG 0.441864 2.1:-73718966 None:intergenic
GTTAAATTAGCACAGGAGCT+TGG 0.443116 2.1:+73720784 MS.gene02177:CDS
GCAAGCGCTGCGAGAGTACC+AGG 0.448469 2.1:-73722504 None:intergenic
ATTTATTAATGCTGTCATCT+GGG 0.450148 2.1:+73723078 MS.gene02177:CDS
CCCTGTCACACAAAATGAAT+GGG 0.451548 2.1:+73720972 MS.gene02177:CDS
GGTGGTAATTTCAAACCCTT+GGG 0.454290 2.1:+73720807 MS.gene02177:CDS
GATGGGATTGAACGTGGAGA+TGG 0.457634 2.1:-73718943 None:intergenic
CCTTCCTGATATATTCAAAA+CGG 0.459591 2.1:+73723042 MS.gene02177:CDS
ATGGGATTGAACGTGGAGAT+GGG 0.461331 2.1:-73718942 None:intergenic
GCCCAAGCTCCAACCGGCAA+CGG 0.461337 2.1:-73719249 None:intergenic
CACACCAGAGGCACCTGCCC+TGG 0.462143 2.1:+73720924 MS.gene02177:CDS
TTTCCAGTTTCTTTGCAGCC+AGG 0.463263 2.1:-73720942 None:intergenic
GAGTTGAATTAGCATGAATT+GGG 0.465939 2.1:-73719038 None:intergenic
CACACAAAATGAATGGGTTA+TGG 0.470045 2.1:+73720978 MS.gene02177:CDS
CATAGGGCAGCTGGTGTCCC+TGG 0.470166 2.1:+73722486 MS.gene02177:CDS
TGGTCTTGCAGAGAGACTCT+TGG 0.472309 2.1:+73722141 MS.gene02177:intron
CCAGCTCTAGCAGTAGTACT+AGG 0.475907 2.1:-73719510 None:intergenic
GCTCGCGGGTTTGTGAAGAC+GGG 0.479012 2.1:+73719381 MS.gene02177:CDS
GCTTGGTTTGCCATTCTAGT+GGG 0.480852 2.1:+73722270 MS.gene02177:CDS
GAAGGTGGTGATTGTGAAGG+TGG 0.482904 2.1:-73719063 None:intergenic
GAAGGATTGTGATGATTTGA+GGG 0.483348 2.1:-73718965 None:intergenic
GCTGTCATCTGGGGAGGTGT+TGG 0.483473 2.1:+73723088 MS.gene02177:CDS
GAAGGTAGGTGAAGAAGTTG+TGG 0.484131 2.1:-73718854 None:intergenic
GCAGTAGTACTAGGCATAGC+AGG 0.484964 2.1:-73719501 None:intergenic
AGTCCCTCCTCTAAGAGATT+GGG 0.486229 2.1:+73719591 MS.gene02177:CDS
AGCACTAAATGCAGCTGTAA+AGG 0.486387 2.1:-73719313 None:intergenic
ATCAAGATTGAAATGACAAA+AGG 0.487616 2.1:-73719120 None:intergenic
AAGCCCCTACATGCCCAGTC+TGG 0.488462 2.1:-73722440 None:intergenic
TGCATTTCTTGCCATGCATA+GGG 0.488787 2.1:+73722470 MS.gene02177:CDS
TGCAAAGAAACTGGAAACGA+TGG 0.489852 2.1:+73720948 MS.gene02177:CDS
GGCTTGGTTTGCCATTCTAG+TGG 0.491057 2.1:+73722269 MS.gene02177:CDS
GCAAGCCAGTTGACAAACCT+TGG 0.492138 2.1:+73722297 MS.gene02177:CDS
GTGTTAAGCCCGTTGCCGGT+TGG 0.495797 2.1:+73719240 MS.gene02177:CDS
GCCCTGTCACACAAAATGAA+TGG 0.496344 2.1:+73720971 MS.gene02177:CDS
GTTAAAGGTTGAAACTTTGG+AGG 0.498980 2.1:-73718995 None:intergenic
AGAAAAGCCCAAGCTCCAAC+CGG 0.499960 2.1:-73719255 None:intergenic
TGTAATTGCACCGAAAAGAT+TGG 0.500834 2.1:-73722541 None:intergenic
AAGTCACTTTCACTCTCTGC+TGG 0.503849 2.1:+73719555 MS.gene02177:CDS
TGAAGAACAGCCAATGAAGC+CGG 0.505209 2.1:-73722381 None:intergenic
CGGCGTGGGATACCTTGGCT+TGG 0.507831 2.1:+73722253 MS.gene02177:CDS
CTGCATTTCTTGCCATGCAT+AGG 0.509976 2.1:+73722469 MS.gene02177:CDS
CAATGAAGCCGGCCAGCTCA+AGG 0.512178 2.1:-73722370 None:intergenic
CAAGCCAGTTGACAAACCTT+GGG 0.513135 2.1:+73722298 MS.gene02177:CDS
AACTTTGGAGGGAAAAGAGA+AGG 0.514985 2.1:-73718983 None:intergenic
ATTGTGATGATTTGAGGGAT+GGG 0.518902 2.1:-73718960 None:intergenic
TTTGAAGGTGGTGATTGTGA+AGG 0.521046 2.1:-73719066 None:intergenic
ATCGTTCTCCTTGAGCTGGC+CGG 0.521340 2.1:+73722362 MS.gene02177:CDS
AGAGAATTGAGATCTGAAGA+TGG 0.529793 2.1:-73718908 None:intergenic
TGAAGTGCAAAACTCTCCAT+TGG 0.529902 2.1:-73718823 None:intergenic
AGTGCTGTAGCTGCAATGCT+TGG 0.530608 2.1:+73722171 MS.gene02177:CDS
GCAAGAAGACAAACAAATGC+AGG 0.533080 2.1:-73720856 None:intergenic
AGCGGTTAGGAAAAGAGCGC+TGG 0.538132 2.1:-73720740 None:intergenic
GCAAGCCAGACTGGGCATGT+AGG 0.538403 2.1:+73722435 MS.gene02177:CDS
TTAGCATGAATTGGGAAATG+GGG 0.542550 2.1:-73719030 None:intergenic
GCCTTAAACCACGTAACCCA+AGG 0.543186 2.1:-73720823 None:intergenic
AAAATCGGCGTGGGATACCT+TGG 0.547524 2.1:+73722248 MS.gene02177:CDS
GACACCAGCTGCCCTATGCA+TGG 0.551779 2.1:-73722481 None:intergenic
CCTAGTACTACTGCTAGAGC+TGG 0.554496 2.1:+73719510 MS.gene02177:CDS
GAGGTGTTGGCTCTATCTGG+TGG 0.556404 2.1:+73723101 MS.gene02177:CDS
TTCCAGTTTCTTTGCAGCCA+GGG 0.558615 2.1:-73720941 None:intergenic
CAAACCTTGGGATTGTGAGC+TGG 0.559194 2.1:+73722310 MS.gene02177:CDS
CCGGCAACGGGCTTAACACA+AGG 0.563775 2.1:-73719236 None:intergenic
GATTGTGATGATTTGAGGGA+TGG 0.564844 2.1:-73718961 None:intergenic
GGTGGTGATTGTGAAGGTGG+TGG 0.567979 2.1:-73719060 None:intergenic
GAGAATTGAGATCTGAAGAT+GGG 0.569360 2.1:-73718907 None:intergenic
GTGAAGAACGATGATGATGA+TGG 0.570327 2.1:-73718882 None:intergenic
TTGAGGGATGGGATTGAACG+TGG 0.571420 2.1:-73718949 None:intergenic
TTAAAGGTTGAAACTTTGGA+GGG 0.572665 2.1:-73718994 None:intergenic
GGAGAACGATCGAAGGCTGT+TGG 0.573491 2.1:-73722349 None:intergenic
GCTTGCCATACCCACTAGAA+TGG 0.574637 2.1:-73722280 None:intergenic
GCAAAGAAACTGGAAACGAT+GGG 0.575984 2.1:+73720949 MS.gene02177:CDS
ATTAATGCTGTCATCTGGGG+AGG 0.577151 2.1:+73723082 MS.gene02177:CDS
TTTATTAATGCTGTCATCTG+GGG 0.579403 2.1:+73723079 MS.gene02177:CDS
GGTGTGTCTTTAATTTCAGG+AGG 0.582059 2.1:-73720907 None:intergenic
ATGATGATGATGGAGGAAGA+AGG 0.584922 2.1:-73718872 None:intergenic
TTTCAAACCCTTGGGTTACG+TGG 0.588383 2.1:+73720815 MS.gene02177:CDS
TGATGATGGAGGAAGAAGGT+AGG 0.589500 2.1:-73718868 None:intergenic
AGCTCCCAATCTCTTAGAGG+AGG 0.589921 2.1:-73719595 None:intergenic
TCTTGGCCTGACAACATCCG+TGG 0.589949 2.1:+73719275 MS.gene02177:CDS
CGTCTTAGGAGTCCTTGACT+GGG 0.590653 2.1:+73722209 MS.gene02177:CDS
CAAGGCCAGCTATAGTTGAA+AGG 0.594470 2.1:-73719218 None:intergenic
GCTCTGTGTTAAATTAGCAC+AGG 0.596919 2.1:+73720777 MS.gene02177:CDS
TCAAGCAGTCATCCCAGTCA+AGG 0.602001 2.1:-73722221 None:intergenic
CAAGCTGCTGTATACTATGG+AGG 0.606951 2.1:+73722579 MS.gene02177:CDS
TGTGACATGTAACAGTCTGC+CGG 0.610671 2.1:+73720712 MS.gene02177:intron
GTTTGTGAAGACGGGTTTAG+GGG 0.614584 2.1:+73719389 MS.gene02177:CDS
GAGCTGGATGTCTGATTGTG+TGG 0.615254 2.1:+73722326 MS.gene02177:CDS
AGCTCAAGGAGAACGATCGA+AGG 0.615633 2.1:-73722356 None:intergenic
TAAATTAGCACAGGAGCTTG+GGG 0.618128 2.1:+73720786 MS.gene02177:CDS
TTGAAGTTACACCTCAAGCA+TGG 0.624236 2.1:+73719178 MS.gene02177:CDS
GCTCCCAATCTCTTAGAGGA+GGG 0.627182 2.1:-73719594 None:intergenic
CCTTAAACCACGTAACCCAA+GGG 0.627527 2.1:-73720822 None:intergenic
AGTACTACTGCTAGAGCTGG+TGG 0.631739 2.1:+73719513 MS.gene02177:CDS
GAAAGCAATTGCCATGCTTG+AGG 0.636430 2.1:-73719189 None:intergenic
ATTAGCACAGGAGCTTGGGG+TGG 0.642898 2.1:+73720789 MS.gene02177:CDS
TAGATCGTGTATAAAATCAA+CGG 0.643604 2.1:-73720883 None:intergenic
TAGAATGGCAAACCAAGCCA+AGG 0.647704 2.1:-73722265 None:intergenic
AAGCCAGACTGGGCATGTAG+GGG 0.658449 2.1:+73722437 MS.gene02177:CDS
ACATCCAGCTCACAATCCCA+AGG 0.664594 2.1:-73722314 None:intergenic
GCAATTACACACTATAGCAG+TGG 0.666445 2.1:+73722555 MS.gene02177:CDS
CAAGCGCTGCGAGAGTACCA+GGG 0.706701 2.1:-73722503 None:intergenic
AGTCAAGGACTCCTAAGACG+AGG 0.716369 2.1:-73722206 None:intergenic
TGAAATTAAAGACACACCAG+AGG 0.727115 2.1:+73720912 MS.gene02177:CDS
AAGAACGATGATGATGATGG+AGG 0.729857 2.1:-73718879 None:intergenic
GTAGTGGATGAAGAAATAAG+CGG 0.766547 2.1:-73722406 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATATATTAGTATTAATA+AGG - chr2.1:73721690-73721709 None:intergenic 10.0%
!! AGATATATTAGTATTAATAA+GGG - chr2.1:73721689-73721708 None:intergenic 10.0%
!! TTATTAATACTAATATATCT+TGG + chr2.1:73721689-73721708 MS.gene02177:intron 10.0%
!! ATTTCATCTAATAAATATAG+AGG - chr2.1:73719926-73719945 None:intergenic 15.0%
!! GATATATTAGTATTAATAAG+GGG - chr2.1:73721688-73721707 None:intergenic 15.0%
!! TAAAATTGACATATAAATAG+AGG + chr2.1:73720184-73720203 MS.gene02177:intron 15.0%
!! TTAAATATTCAACTGTAAAA+TGG - chr2.1:73720329-73720348 None:intergenic 15.0%
!! TTAGTTTATAATGTTATACA+CGG + chr2.1:73719705-73719724 MS.gene02177:intron 15.0%
!!! ATTATTTTTGATTGAGTAAA+TGG + chr2.1:73721075-73721094 MS.gene02177:intron 15.0%
!!! GAATAAAATACAATTTTACA+AGG - chr2.1:73720454-73720473 None:intergenic 15.0%
!!! GTAAAATTGTATTTTATTCT+TGG + chr2.1:73720455-73720474 MS.gene02177:intron 15.0%
!! AAAGAAAAACAGAAATCATA+TGG - chr2.1:73722630-73722649 None:intergenic 20.0%
!! AATACTAATATATCTTGGAA+CGG + chr2.1:73721694-73721713 MS.gene02177:intron 20.0%
!! ATACATGTAATGTAAATGTA+TGG - chr2.1:73722704-73722723 None:intergenic 20.0%
!! ATATAAATAGAGGTAACTTA+AGG + chr2.1:73720194-73720213 MS.gene02177:intron 20.0%
!! TAGCTTATGAAAAAAGTTAT+TGG + chr2.1:73721489-73721508 MS.gene02177:intron 20.0%
!! TCAAATTCACAAAGTATAAA+GGG - chr2.1:73722909-73722928 None:intergenic 20.0%
!! TTGTTCATGAAAAAAGAAAA+AGG - chr2.1:73720156-73720175 None:intergenic 20.0%
!!! CTTTTACTAATGAAGTTATT+TGG + chr2.1:73719334-73719353 MS.gene02177:CDS 20.0%
!!! TGTGTCTTTTATTCAAAATA+CGG - chr2.1:73719995-73720014 None:intergenic 20.0%
!!! TTAGACATTTTAATATACTC+AGG + chr2.1:73721720-73721739 MS.gene02177:intron 20.0%
! AATTATGTATTCTCACTTCT+CGG + chr2.1:73720597-73720616 MS.gene02177:intron 25.0%
! AGAGACAAAAAATTCTTCAA+GGG - chr2.1:73721613-73721632 None:intergenic 25.0%
! AGTGAAAGTGACTTAATAAT+AGG - chr2.1:73719549-73719568 None:intergenic 25.0%
! ATCAAGATTGAAATGACAAA+AGG - chr2.1:73719123-73719142 None:intergenic 25.0%
! ATCTAACATATATGTTAGCA+AGG - chr2.1:73719962-73719981 None:intergenic 25.0%
! ATTAAACTGTTTATCCAAGT+TGG + chr2.1:73721886-73721905 MS.gene02177:intron 25.0%
! ATTGAAATGACAAAAGGAAT+TGG - chr2.1:73719117-73719136 None:intergenic 25.0%
! ATTTAACCAAATAATCACTC+AGG + chr2.1:73720343-73720362 MS.gene02177:intron 25.0%
! ATTTATTAATGCTGTCATCT+GGG + chr2.1:73723078-73723097 MS.gene02177:CDS 25.0%
! CCTTTAACTCACAAAAATTA+GGG - chr2.1:73720087-73720106 None:intergenic 25.0%
! CTGAAAATATTGAACTTTGA+AGG + chr2.1:73721111-73721130 MS.gene02177:intron 25.0%
! CTTAATATACGTGGAAAAAA+AGG + chr2.1:73721799-73721818 MS.gene02177:intron 25.0%
! CTTCATTTCTGTTTGTTTAA+TGG + chr2.1:73722742-73722761 MS.gene02177:intron 25.0%
! GAAGTAGTTATGATTGAAAT+CGG + chr2.1:73719763-73719782 MS.gene02177:intron 25.0%
! GTCAAATTCACAAAGTATAA+AGG - chr2.1:73722910-73722929 None:intergenic 25.0%
! GTTAATATGCATATGAGAAA+AGG - chr2.1:73721201-73721220 None:intergenic 25.0%
! GTTCAGTGAAATTATAGTAT+AGG - chr2.1:73720633-73720652 None:intergenic 25.0%
! GTTGAATTCAATACTATCAT+TGG + chr2.1:73722110-73722129 MS.gene02177:intron 25.0%
! TACTATCATTGGTATTTCTT+TGG + chr2.1:73722121-73722140 MS.gene02177:intron 25.0%
! TAGAGACAAAAAATTCTTCA+AGG - chr2.1:73721614-73721633 None:intergenic 25.0%
! TAGATCGTGTATAAAATCAA+CGG - chr2.1:73720886-73720905 None:intergenic 25.0%
! TCCACGTATATTAAGAAAAA+TGG - chr2.1:73721794-73721813 None:intergenic 25.0%
! TCCTTTAACTCACAAAAATT+AGG - chr2.1:73720088-73720107 None:intergenic 25.0%
! TCTCATATGCATATTAACTT+TGG + chr2.1:73721203-73721222 MS.gene02177:intron 25.0%
! TGCATATTAACTTTGGATAT+AGG + chr2.1:73721210-73721229 MS.gene02177:intron 25.0%
! TGTTTGTTTAATGGTATAAC+TGG + chr2.1:73722751-73722770 MS.gene02177:intron 25.0%
!! GGTTATAATACCAATCTTTT+CGG + chr2.1:73722531-73722550 MS.gene02177:CDS 25.0%
!! TTTGTCATTTCAATCTTGAT+TGG + chr2.1:73719123-73719142 MS.gene02177:CDS 25.0%
!!! ACCATTTTTCTTAATATACG+TGG + chr2.1:73721790-73721809 MS.gene02177:intron 25.0%
!!! ACTTATTTTGTGAAATGGAT+GGG + chr2.1:73719423-73719442 MS.gene02177:CDS 25.0%
!!! ATTCAAAACGGGTTTTATTA+TGG + chr2.1:73723054-73723073 MS.gene02177:CDS 25.0%
!!! TACTTATTTTGTGAAATGGA+TGG + chr2.1:73719422-73719441 MS.gene02177:CDS 25.0%
!!! TATTGACTTTAGAACTAGTT+AGG + chr2.1:73719869-73719888 MS.gene02177:intron 25.0%
!!! TTGCTACTTATTTTGTGAAA+TGG + chr2.1:73719418-73719437 MS.gene02177:CDS 25.0%
!!! TTTGATTTTATGAGACATGA+TGG + chr2.1:73720554-73720573 MS.gene02177:intron 25.0%
AAAAACAGAAATCATATGGC+GGG - chr2.1:73722626-73722645 None:intergenic 30.0%
AACCGATTGTAATTTCTTGA+CGG - chr2.1:73719845-73719864 None:intergenic 30.0%
AAGGTTAAAGGTTGAAACTT+TGG - chr2.1:73719001-73719020 None:intergenic 30.0%
AATTAGCATGAATTGGGAAA+TGG - chr2.1:73719035-73719054 None:intergenic 30.0%
AGTAAATCCAAACCTGAAAT+TGG - chr2.1:73719635-73719654 None:intergenic 30.0%
ATCTATCCTGAGTGATTATT+TGG - chr2.1:73720352-73720371 None:intergenic 30.0%
ATTAGCATGAATTGGGAAAT+GGG - chr2.1:73719034-73719053 None:intergenic 30.0%
CATTTATTAATGCTGTCATC+TGG + chr2.1:73723077-73723096 MS.gene02177:CDS 30.0%
CCTTCCTGATATATTCAAAA+CGG + chr2.1:73723042-73723061 MS.gene02177:CDS 30.0%
CTTCCTGATATATTCAAAAC+GGG + chr2.1:73723043-73723062 MS.gene02177:CDS 30.0%
GAAAAACAGAAATCATATGG+CGG - chr2.1:73722627-73722646 None:intergenic 30.0%
GAACTCTTACACATAAAAGA+AGG - chr2.1:73722040-73722059 None:intergenic 30.0%
GAGTTGAATTAGCATGAATT+GGG - chr2.1:73719041-73719060 None:intergenic 30.0%
TCAAAACCCAATATTCTTCA+AGG + chr2.1:73719084-73719103 MS.gene02177:CDS 30.0%
TCAAATAAGTCAATCCAAAC+AGG - chr2.1:73721362-73721381 None:intergenic 30.0%
TCTTATTCAGAACCAATTTC+AGG + chr2.1:73719620-73719639 MS.gene02177:CDS 30.0%
TGACTGCTTGAATGAAAAAT+CGG + chr2.1:73722233-73722252 MS.gene02177:CDS 30.0%
TTAAAGGTTGAAACTTTGGA+GGG - chr2.1:73718997-73719016 None:intergenic 30.0%
TTCCATCATGTTTAATTGAG+AGG - chr2.1:73720024-73720043 None:intergenic 30.0%
TTGTTTAATGGTATAACTGG+TGG + chr2.1:73722754-73722773 MS.gene02177:intron 30.0%
TTTATTAATGCTGTCATCTG+GGG + chr2.1:73723079-73723098 MS.gene02177:CDS 30.0%
TTTGCACCTTGAAGAATATT+GGG - chr2.1:73719093-73719112 None:intergenic 30.0%
! ATTTTCCTTTCAACTATAGC+TGG + chr2.1:73719213-73719232 MS.gene02177:CDS 30.0%
! CCAAAAGGCTATATTTGTTA+AGG + chr2.1:73722861-73722880 MS.gene02177:intron 30.0%
! CCCTAATTTTTGTGAGTTAA+AGG + chr2.1:73720084-73720103 MS.gene02177:intron 30.0%
! CCTTAACAAATATAGCCTTT+TGG - chr2.1:73722864-73722883 None:intergenic 30.0%
! TCTATCTGGTGGAAATTTTT+AGG + chr2.1:73723112-73723131 MS.gene02177:CDS 30.0%
!! AAACCCGTTTTGAATATATC+AGG - chr2.1:73723049-73723068 None:intergenic 30.0%
!! AGTACTTTAGGACTTTCTTA+TGG + chr2.1:73719450-73719469 MS.gene02177:CDS 30.0%
!! TGAAGAATATTGGGTTTTGA+AGG - chr2.1:73719084-73719103 None:intergenic 30.0%
!!! CAATTCTTGTTTTTAACAGC+TGG + chr2.1:73723010-73723029 MS.gene02177:intron 30.0%
!!! CTTATTTTGTGAAATGGATG+GGG + chr2.1:73719424-73719443 MS.gene02177:CDS 30.0%
!!! TCGGATGTTTTTTAATGATC+TGG + chr2.1:73719782-73719801 MS.gene02177:intron 30.0%
AACAAACAGAAATGAAGCGT+AGG - chr2.1:73722739-73722758 None:intergenic 35.0%
AATAAGCTGAAAACTCCCTA+TGG - chr2.1:73721447-73721466 None:intergenic 35.0%
ACAAACAGAAATGAAGCGTA+GGG - chr2.1:73722738-73722757 None:intergenic 35.0%
ACATCTTATGACATGTCCAT+AGG + chr2.1:73721428-73721447 MS.gene02177:intron 35.0%
AGAAGGATTGTGATGATTTG+AGG - chr2.1:73718969-73718988 None:intergenic 35.0%
AGAGAATTGAGATCTGAAGA+TGG - chr2.1:73718911-73718930 None:intergenic 35.0%
ATGCACCTAGTAAATTGCAT+AGG - chr2.1:73721647-73721666 None:intergenic 35.0%
ATTGTGATGATTTGAGGGAT+GGG - chr2.1:73718963-73718982 None:intergenic 35.0%
CACCGTCAAGAAATTACAAT+CGG + chr2.1:73719840-73719859 MS.gene02177:intron 35.0%
CATCTTATGACATGTCCATA+GGG + chr2.1:73721429-73721448 MS.gene02177:intron 35.0%
CATGTTTAATTGAGAGGCAA+AGG - chr2.1:73720018-73720037 None:intergenic 35.0%
CTTTGCACCTTGAAGAATAT+TGG - chr2.1:73719094-73719113 None:intergenic 35.0%
GAAGGATTGTGATGATTTGA+GGG - chr2.1:73718968-73718987 None:intergenic 35.0%
GAGAATTGAGATCTGAAGAT+GGG - chr2.1:73718910-73718929 None:intergenic 35.0%
GAGCTAATTAGTTAATTCGC+AGG - chr2.1:73722653-73722672 None:intergenic 35.0%
GGAGTTGAATTAGCATGAAT+TGG - chr2.1:73719042-73719061 None:intergenic 35.0%
GTTAAAGGTTGAAACTTTGG+AGG - chr2.1:73718998-73719017 None:intergenic 35.0%
TACGTGGAAAAAAAGGTAAG+AGG + chr2.1:73721806-73721825 MS.gene02177:intron 35.0%
TGAAATTAAAGACACACCAG+AGG + chr2.1:73720912-73720931 MS.gene02177:CDS 35.0%
TGACATAAGCACTTGTGTTT+GGG + chr2.1:73721392-73721411 MS.gene02177:intron 35.0%
TGATTGAGTAAATGGTCTCA+TGG + chr2.1:73721083-73721102 MS.gene02177:intron 35.0%
TGCACCTAGTAAATTGCATA+GGG - chr2.1:73721646-73721665 None:intergenic 35.0%
TGCCTCTCAATTAAACATGA+TGG + chr2.1:73720019-73720038 MS.gene02177:intron 35.0%
TGCTTAGAAAAAGAGATGGA+GGG + chr2.1:73721829-73721848 MS.gene02177:intron 35.0%
TGTAATTGCACCGAAAAGAT+TGG - chr2.1:73722544-73722563 None:intergenic 35.0%
TGTGAGTTAAAGGAATGACT+TGG + chr2.1:73720094-73720113 MS.gene02177:intron 35.0%
TTAAATTAGCACAGGAGCTT+GGG + chr2.1:73720785-73720804 MS.gene02177:CDS 35.0%
TTAGCATGAATTGGGAAATG+GGG - chr2.1:73719033-73719052 None:intergenic 35.0%
TTATCAATACTCCTCGTCTT+AGG + chr2.1:73722195-73722214 MS.gene02177:CDS 35.0%
! CTGTTTATCCAAGTTGGAAA+AGG + chr2.1:73721892-73721911 MS.gene02177:intron 35.0%
! TCTGGTGTGTCTTTAATTTC+AGG - chr2.1:73720913-73720932 None:intergenic 35.0%
!! CACACAAAATGAATGGGTTA+TGG + chr2.1:73720978-73720997 MS.gene02177:CDS 35.0%
!! CCGTTTTGAATATATCAGGA+AGG - chr2.1:73723045-73723064 None:intergenic 35.0%
!! GTAGTGGATGAAGAAATAAG+CGG - chr2.1:73722409-73722428 None:intergenic 35.0%
!! TCTTGATTGGTCTCATTGTA+AGG + chr2.1:73719136-73719155 MS.gene02177:CDS 35.0%
!! TTCAGAACCAATTTCAGGTT+TGG + chr2.1:73719625-73719644 MS.gene02177:intron 35.0%
!!! AGAATATTGGGTTTTGAAGG+TGG - chr2.1:73719081-73719100 None:intergenic 35.0%
!!! CTCACTTTTTACTCTACTTC+AGG + chr2.1:73719657-73719676 MS.gene02177:intron 35.0%
!!! GGGTTTTGAGAAAAGGTTAA+AGG - chr2.1:73719013-73719032 None:intergenic 35.0%
!!! TTATCATTGTTTTAGCCTCC+AGG + chr2.1:73721167-73721186 MS.gene02177:intron 35.0%
AAAAGCTCCCAATCTCTTAG+AGG - chr2.1:73719601-73719620 None:intergenic 40.0%
AGCACTAAATGCAGCTGTAA+AGG - chr2.1:73719316-73719335 None:intergenic 40.0%
AGCTGCAATTAGTGACCAAA+AGG + chr2.1:73722846-73722865 MS.gene02177:intron 40.0%
ATAGTTAGGACAGAGGGAAT+AGG - chr2.1:73721585-73721604 None:intergenic 40.0%
CAACCAAGAAATACAGCAAG+TGG - chr2.1:73720663-73720682 None:intergenic 40.0%
CAAGAAATACAGCAAGTGGA+AGG - chr2.1:73720659-73720678 None:intergenic 40.0%
CACCTAGTAAATTGCATAGG+GGG - chr2.1:73721644-73721663 None:intergenic 40.0%
CAGACTGTTACATGTCACAA+AGG - chr2.1:73720711-73720730 None:intergenic 40.0%
CAGTCTCTTTGTGGATCTTT+GGG + chr2.1:73721019-73721038 MS.gene02177:CDS 40.0%
CCCTGTCACACAAAATGAAT+GGG + chr2.1:73720972-73720991 MS.gene02177:CDS 40.0%
CTGACATAAGCACTTGTGTT+TGG + chr2.1:73721391-73721410 MS.gene02177:intron 40.0%
CTTCAAGGGAGCTTATAGTT+AGG - chr2.1:73721599-73721618 None:intergenic 40.0%
CTTGAATGAAAAATCGGCGT+GGG + chr2.1:73722239-73722258 MS.gene02177:CDS 40.0%
GACTTGCACAGGTATAGTTT+GGG - chr2.1:73722011-73722030 None:intergenic 40.0%
GAGCTTATAGTTAGGACAGA+GGG - chr2.1:73721591-73721610 None:intergenic 40.0%
GATTGTGATGATTTGAGGGA+TGG - chr2.1:73718964-73718983 None:intergenic 40.0%
GCAAAGAAACTGGAAACGAT+GGG + chr2.1:73720949-73720968 MS.gene02177:CDS 40.0%
GCAAGAAGACAAACAAATGC+AGG - chr2.1:73720859-73720878 None:intergenic 40.0%
GCAATTACACACTATAGCAG+TGG + chr2.1:73722555-73722574 MS.gene02177:CDS 40.0%
GCACCTAGTAAATTGCATAG+GGG - chr2.1:73721645-73721664 None:intergenic 40.0%
GCTCTGTGTTAAATTAGCAC+AGG + chr2.1:73720777-73720796 MS.gene02177:CDS 40.0%
GGTGGTAATTTCAAACCCTT+GGG + chr2.1:73720807-73720826 MS.gene02177:CDS 40.0%
GTGCTTAGAAAAAGAGATGG+AGG + chr2.1:73721828-73721847 MS.gene02177:intron 40.0%
GTTAAATTAGCACAGGAGCT+TGG + chr2.1:73720784-73720803 MS.gene02177:CDS 40.0%
TAAATTAGCACAGGAGCTTG+GGG + chr2.1:73720786-73720805 MS.gene02177:CDS 40.0%
TGAGAAAAGGAGCTTAAACC+TGG - chr2.1:73721188-73721207 None:intergenic 40.0%
TGCAAAGAAACTGGAAACGA+TGG + chr2.1:73720948-73720967 MS.gene02177:CDS 40.0%
TGCATTTCTTGCCATGCATA+GGG + chr2.1:73722470-73722489 MS.gene02177:CDS 40.0%
TTGAAGTTACACCTCAAGCA+TGG + chr2.1:73719178-73719197 MS.gene02177:CDS 40.0%
TTTGAAGGTGGTGATTGTGA+AGG - chr2.1:73719069-73719088 None:intergenic 40.0%
! AACTTTGGAGGGAAAAGAGA+AGG - chr2.1:73718986-73719005 None:intergenic 40.0%
! ACCCATTCATTTTGTGTGAC+AGG - chr2.1:73720976-73720995 None:intergenic 40.0%
! ATTTCCATAAGCTGACTCAC+TGG + chr2.1:73721464-73721483 MS.gene02177:intron 40.0%
! CCCATTCATTTTGTGTGACA+GGG - chr2.1:73720975-73720994 None:intergenic 40.0%
! GAAGGTATAATGACTTGCAC+AGG - chr2.1:73722022-73722041 None:intergenic 40.0%
! GAGGTGCTTAGAAAAAGAGA+TGG + chr2.1:73721825-73721844 MS.gene02177:intron 40.0%
! GGTGTAACTTCAACTGGTTT+AGG - chr2.1:73719171-73719190 None:intergenic 40.0%
! GGTGTGTCTTTAATTTCAGG+AGG - chr2.1:73720910-73720929 None:intergenic 40.0%
! GGTTAGAGTTTTTGTGACCA+CGG - chr2.1:73719295-73719314 None:intergenic 40.0%
! GTGAAGAACGATGATGATGA+TGG - chr2.1:73718885-73718904 None:intergenic 40.0%
! TGACTTGCACAGGTATAGTT+TGG - chr2.1:73722012-73722031 None:intergenic 40.0%
! TTTCCATAAGCTGACTCACT+GGG + chr2.1:73721465-73721484 MS.gene02177:intron 40.0%
!! AAGAACGATGATGATGATGG+AGG - chr2.1:73718882-73718901 None:intergenic 40.0%
!! ATATCGTTTTTCTTCGCTCG+CGG + chr2.1:73719366-73719385 MS.gene02177:CDS 40.0%
!! ATGATGATGATGGAGGAAGA+AGG - chr2.1:73718875-73718894 None:intergenic 40.0%
!! CTTCCACTTGCTGTATTTCT+TGG + chr2.1:73720657-73720676 MS.gene02177:intron 40.0%
!!! GGAAATGGGGTTTTGAGAAA+AGG - chr2.1:73719020-73719039 None:intergenic 40.0%
AATCCAAACAGGCCCTAAGT+GGG - chr2.1:73721351-73721370 None:intergenic 45.0%
AATGAGTGGAGTGGGATACA+TGG - chr2.1:73720493-73720512 None:intergenic 45.0%
ACAGAAATGAAGCGTAGGGA+AGG - chr2.1:73722734-73722753 None:intergenic 45.0%
AGCCCCCTATGCAATTTACT+AGG + chr2.1:73721639-73721658 MS.gene02177:intron 45.0%
ATGGGATTGAACGTGGAGAT+GGG - chr2.1:73718945-73718964 None:intergenic 45.0%
ATGTATCCCACTCCACTCAT+TGG + chr2.1:73720492-73720511 MS.gene02177:intron 45.0%
ATTAATGCTGTCATCTGGGG+AGG + chr2.1:73723082-73723101 MS.gene02177:CDS 45.0%
CAAGCCAGTTGACAAACCTT+GGG + chr2.1:73722298-73722317 MS.gene02177:CDS 45.0%
CAAGCTGCTGTATACTATGG+AGG + chr2.1:73722579-73722598 MS.gene02177:CDS 45.0%
CAAGGCCAGCTATAGTTGAA+AGG - chr2.1:73719221-73719240 None:intergenic 45.0%
CAATCCCAAGGTTTGTCAAC+TGG - chr2.1:73722305-73722324 None:intergenic 45.0%
CCTTAAACCACGTAACCCAA+GGG - chr2.1:73720825-73720844 None:intergenic 45.0%
CTCAGATGATATTGCCACCT+TGG + chr2.1:73720416-73720435 MS.gene02177:intron 45.0%
CTCTTAGAGGAGGGACTATT+AGG - chr2.1:73719588-73719607 None:intergenic 45.0%
CTGCATTTCTTGCCATGCAT+AGG + chr2.1:73722469-73722488 MS.gene02177:CDS 45.0%
CTTATCCCAATGAGTGGAGT+GGG - chr2.1:73720501-73720520 None:intergenic 45.0%
CTTGTGTTTGGGAGAGCTTA+TGG + chr2.1:73721403-73721422 MS.gene02177:intron 45.0%
GAAAAGGAGCTTAAACCTGG+AGG - chr2.1:73721185-73721204 None:intergenic 45.0%
GAAAGCAATTGCCATGCTTG+AGG - chr2.1:73719192-73719211 None:intergenic 45.0%
GAAGGTAGGTGAAGAAGTTG+TGG - chr2.1:73718857-73718876 None:intergenic 45.0%
GCAGTCTCTTTGTGGATCTT+TGG + chr2.1:73721018-73721037 MS.gene02177:CDS 45.0%
GCCCTGTCACACAAAATGAA+TGG + chr2.1:73720971-73720990 MS.gene02177:CDS 45.0%
GCTTGAATGAAAAATCGGCG+TGG + chr2.1:73722238-73722257 MS.gene02177:CDS 45.0%
GCTTGAGGTGTAACTTCAAC+TGG - chr2.1:73719177-73719196 None:intergenic 45.0%
GGAGCTTATAGTTAGGACAG+AGG - chr2.1:73721592-73721611 None:intergenic 45.0%
GGGTGGTAATTTCAAACCCT+TGG + chr2.1:73720806-73720825 MS.gene02177:CDS 45.0%
GGTCAAGCTGCTGTATACTA+TGG + chr2.1:73722576-73722595 MS.gene02177:CDS 45.0%
TAGAATGGCAAACCAAGCCA+AGG - chr2.1:73722268-73722287 None:intergenic 45.0%
TATCCCAGTGAGTCAGCTTA+TGG - chr2.1:73721471-73721490 None:intergenic 45.0%
TGAAGAACAGCCAATGAAGC+CGG - chr2.1:73722384-73722403 None:intergenic 45.0%
TGCTTCTTGCAGTCTCTTTG+TGG + chr2.1:73721010-73721029 MS.gene02177:CDS 45.0%
TGTATCCCACTCCACTCATT+GGG + chr2.1:73720493-73720512 MS.gene02177:intron 45.0%
TGTGACATGTAACAGTCTGC+CGG + chr2.1:73720712-73720731 MS.gene02177:intron 45.0%
TTCCAGTTTCTTTGCAGCCA+GGG - chr2.1:73720944-73720963 None:intergenic 45.0%
TTTCAAACCCTTGGGTTACG+TGG + chr2.1:73720815-73720834 MS.gene02177:CDS 45.0%
TTTCCAGTTTCTTTGCAGCC+AGG - chr2.1:73720945-73720964 None:intergenic 45.0%
! AAGTCACTTTCACTCTCTGC+TGG + chr2.1:73719555-73719574 MS.gene02177:CDS 45.0%
! ACCTTTTTGCAAGCCAGACT+GGG + chr2.1:73722427-73722446 MS.gene02177:CDS 45.0%
! AGTCCCTCCTCTAAGAGATT+GGG + chr2.1:73719591-73719610 MS.gene02177:CDS 45.0%
! AGTCGATGCCTTTTCCAACT+TGG - chr2.1:73721903-73721922 None:intergenic 45.0%
! GGTGGTGGTTGTTGTTGTAT+TGG + chr2.1:73720525-73720544 MS.gene02177:intron 45.0%
! GGTTTGTGAAGACGGGTTTA+GGG + chr2.1:73719388-73719407 MS.gene02177:CDS 45.0%
! GTTTGCCATTCTAGTGGGTA+TGG + chr2.1:73722275-73722294 MS.gene02177:CDS 45.0%
! GTTTGTGAAGACGGGTTTAG+GGG + chr2.1:73719389-73719408 MS.gene02177:CDS 45.0%
! TACCTTTTTGCAAGCCAGAC+TGG + chr2.1:73722426-73722445 MS.gene02177:CDS 45.0%
! TAGTCCCTCCTCTAAGAGAT+TGG + chr2.1:73719590-73719609 MS.gene02177:CDS 45.0%
! TCTGGCTTGCAAAAAGGTAG+TGG - chr2.1:73722425-73722444 None:intergenic 45.0%
!! GCTTGGTTTGCCATTCTAGT+GGG + chr2.1:73722270-73722289 MS.gene02177:CDS 45.0%
!! TATCGTTTTTCTTCGCTCGC+GGG + chr2.1:73719367-73719386 MS.gene02177:CDS 45.0%
!! TGATGATGGAGGAAGAAGGT+AGG - chr2.1:73718871-73718890 None:intergenic 45.0%
!! TGGATGGGGAAGAGTACTTT+AGG + chr2.1:73719438-73719457 MS.gene02177:CDS 45.0%
!! AAAATTCTAATAAAATATTA+TGG + chr2.1:73721301-73721320 MS.gene02177:intron 5.0%
!!! CAATTTTTTTTTTTTTTTAA+TGG + chr2.1:73720246-73720265 MS.gene02177:intron 5.0%
AAAATCGGCGTGGGATACCT+TGG + chr2.1:73722248-73722267 MS.gene02177:CDS 50.0%
ACATCCAGCTCACAATCCCA+AGG - chr2.1:73722317-73722336 None:intergenic 50.0%
AGAAAAGCCCAAGCTCCAAC+CGG - chr2.1:73719258-73719277 None:intergenic 50.0%
AGCTCAAGGAGAACGATCGA+AGG - chr2.1:73722359-73722378 None:intergenic 50.0%
AGCTCCCAATCTCTTAGAGG+AGG - chr2.1:73719598-73719617 None:intergenic 50.0%
AGTACTACTGCTAGAGCTGG+TGG + chr2.1:73719513-73719532 MS.gene02177:CDS 50.0%
AGTCAAGGACTCCTAAGACG+AGG - chr2.1:73722209-73722228 None:intergenic 50.0%
AGTGCTGTAGCTGCAATGCT+TGG + chr2.1:73722171-73722190 MS.gene02177:CDS 50.0%
ATCCAAACAGGCCCTAAGTG+GGG - chr2.1:73721350-73721369 None:intergenic 50.0%
CAAACCTTGGGATTGTGAGC+TGG + chr2.1:73722310-73722329 MS.gene02177:CDS 50.0%
CAATCCAAACAGGCCCTAAG+TGG - chr2.1:73721352-73721371 None:intergenic 50.0%
CCACTCATTGGGATAAGGCT+TGG + chr2.1:73720504-73720523 MS.gene02177:intron 50.0%
CCACTCCACTCATTGGGATA+AGG + chr2.1:73720499-73720518 MS.gene02177:intron 50.0%
CCCTTGGGTTACGTGGTTTA+AGG + chr2.1:73720822-73720841 MS.gene02177:CDS 50.0%
CCTAGTACTACTGCTAGAGC+TGG + chr2.1:73719510-73719529 MS.gene02177:CDS 50.0%
CCTTATCCCAATGAGTGGAG+TGG - chr2.1:73720502-73720521 None:intergenic 50.0%
CGTCTTAGGAGTCCTTGACT+GGG + chr2.1:73722209-73722228 MS.gene02177:CDS 50.0%
CTCATTGGGATAAGGCTTGG+TGG + chr2.1:73720507-73720526 MS.gene02177:intron 50.0%
GAAGGTGGTGATTGTGAAGG+TGG - chr2.1:73719066-73719085 None:intergenic 50.0%
GAGCTGGATGTCTGATTGTG+TGG + chr2.1:73722326-73722345 MS.gene02177:CDS 50.0%
GATGGGATTGAACGTGGAGA+TGG - chr2.1:73718946-73718965 None:intergenic 50.0%
GCAAGCCAGTTGACAAACCT+TGG + chr2.1:73722297-73722316 MS.gene02177:CDS 50.0%
GCAGTAGTACTAGGCATAGC+AGG - chr2.1:73719504-73719523 None:intergenic 50.0%
GCCTTAAACCACGTAACCCA+AGG - chr2.1:73720826-73720845 None:intergenic 50.0%
GCTCCCAATCTCTTAGAGGA+GGG - chr2.1:73719597-73719616 None:intergenic 50.0%
GCTTGCCATACCCACTAGAA+TGG - chr2.1:73722283-73722302 None:intergenic 50.0%
TCAAGCAGTCATCCCAGTCA+AGG - chr2.1:73722224-73722243 None:intergenic 50.0%
TCGTCTTAGGAGTCCTTGAC+TGG + chr2.1:73722208-73722227 MS.gene02177:CDS 50.0%
TTCGATCGTTCTCCTTGAGC+TGG + chr2.1:73722358-73722377 MS.gene02177:CDS 50.0%
TTGAGGGATGGGATTGAACG+TGG - chr2.1:73718952-73718971 None:intergenic 50.0%
TTGTGACCACGGATGTTGTC+AGG - chr2.1:73719284-73719303 None:intergenic 50.0%
! CAAGGCAAAAGCGTACACCA+AGG - chr2.1:73720436-73720455 None:intergenic 50.0%
! CCAAGCCTTATCCCAATGAG+TGG - chr2.1:73720507-73720526 None:intergenic 50.0%
! CCAGCTCTAGCAGTAGTACT+AGG - chr2.1:73719513-73719532 None:intergenic 50.0%
! GAGCAGATTTTGAGCAGCAG+CGG - chr2.1:73720761-73720780 None:intergenic 50.0%
! GATTTTGAGCAGCAGCGGTT+AGG - chr2.1:73720756-73720775 None:intergenic 50.0%
! GGCTTCATTGGCTGTTCTTC+AGG + chr2.1:73722383-73722402 MS.gene02177:CDS 50.0%
! GGGTTTGTGAAGACGGGTTT+AGG + chr2.1:73719387-73719406 MS.gene02177:CDS 50.0%
! GTTGGAGCTTGGGCTTTTCT+TGG + chr2.1:73719258-73719277 MS.gene02177:CDS 50.0%
! TGGCGGGCGTGTTATAGATA+GGG - chr2.1:73722610-73722629 None:intergenic 50.0%
! TGGTCTTGCAGAGAGACTCT+TGG + chr2.1:73722141-73722160 MS.gene02177:intron 50.0%
!! ATGGCGGGCGTGTTATAGAT+AGG - chr2.1:73722611-73722630 None:intergenic 50.0%
!! ATTGGGATAAGGCTTGGTGG+TGG + chr2.1:73720510-73720529 MS.gene02177:intron 50.0%
!! GAAAAGAGCGCTGGAGTTAC+CGG - chr2.1:73720734-73720753 None:intergenic 50.0%
!! GAACGTGGAGATGGGTTTTG+TGG - chr2.1:73718937-73718956 None:intergenic 50.0%
!! GGCTTGGTTTGCCATTCTAG+TGG + chr2.1:73722269-73722288 MS.gene02177:CDS 50.0%
AAACAGGCCCTAAGTGGGGT+TGG - chr2.1:73721346-73721365 None:intergenic 55.0%
AACCCCACTTAGGGCCTGTT+TGG + chr2.1:73721345-73721364 MS.gene02177:intron 55.0%
AAGCCAGACTGGGCATGTAG+GGG + chr2.1:73722437-73722456 MS.gene02177:CDS 55.0%
ACTCTCGCAGCGCTTGCTTT+AGG + chr2.1:73722510-73722529 MS.gene02177:CDS 55.0%
AGTTTCTTTGCAGCCAGGGC+AGG - chr2.1:73720940-73720959 None:intergenic 55.0%
ATCGTTCTCCTTGAGCTGGC+CGG + chr2.1:73722362-73722381 MS.gene02177:CDS 55.0%
ATTAGCACAGGAGCTTGGGG+TGG + chr2.1:73720789-73720808 MS.gene02177:CDS 55.0%
CAAGCCAGACTGGGCATGTA+GGG + chr2.1:73722436-73722455 MS.gene02177:CDS 55.0%
CACGTAGCCAACCCCACTTA+GGG + chr2.1:73721336-73721355 MS.gene02177:intron 55.0%
CCTTGTGTTAAGCCCGTTGC+CGG + chr2.1:73719236-73719255 MS.gene02177:CDS 55.0%
GGAGAACGATCGAAGGCTGT+TGG - chr2.1:73722352-73722371 None:intergenic 55.0%
GGTGGTGATTGTGAAGGTGG+TGG - chr2.1:73719063-73719082 None:intergenic 55.0%
TCTTGGCCTGACAACATCCG+TGG + chr2.1:73719275-73719294 MS.gene02177:CDS 55.0%
TGCCCTGGCTGCAAAGAAAC+TGG + chr2.1:73720939-73720958 MS.gene02177:CDS 55.0%
! AGCGGTTAGGAAAAGAGCGC+TGG - chr2.1:73720743-73720762 None:intergenic 55.0%
! GCCCAGTCTGGCTTGCAAAA+AGG - chr2.1:73722431-73722450 None:intergenic 55.0%
! GGCAAAAGCGTACACCAAGG+TGG - chr2.1:73720433-73720452 None:intergenic 55.0%
!! GAGGTGTTGGCTCTATCTGG+TGG + chr2.1:73723101-73723120 MS.gene02177:CDS 55.0%
AAGCCCCTACATGCCCAGTC+TGG - chr2.1:73722443-73722462 None:intergenic 60.0%
CAATGAAGCCGGCCAGCTCA+AGG - chr2.1:73722373-73722392 None:intergenic 60.0%
CCACGTAGCCAACCCCACTT+AGG + chr2.1:73721335-73721354 MS.gene02177:intron 60.0%
CGCTCGCGGGTTTGTGAAGA+CGG + chr2.1:73719380-73719399 MS.gene02177:CDS 60.0%
CTTGCCATGCATAGGGCAGC+TGG + chr2.1:73722477-73722496 MS.gene02177:CDS 60.0%
GACACCAGCTGCCCTATGCA+TGG - chr2.1:73722484-73722503 None:intergenic 60.0%
GCAAGCCAGACTGGGCATGT+AGG + chr2.1:73722435-73722454 MS.gene02177:CDS 60.0%
GCTCGCGGGTTTGTGAAGAC+GGG + chr2.1:73719381-73719400 MS.gene02177:CDS 60.0%
GTGTTAAGCCCGTTGCCGGT+TGG + chr2.1:73719240-73719259 MS.gene02177:CDS 60.0%
! CCGGCAACGGGCTTAACACA+AGG - chr2.1:73719239-73719258 None:intergenic 60.0%
! CTTGAGCTGGCCGGCTTCAT+TGG + chr2.1:73722371-73722390 MS.gene02177:CDS 60.0%
! GCTGTCATCTGGGGAGGTGT+TGG + chr2.1:73723088-73723107 MS.gene02177:CDS 60.0%
!! CAAGCGCTGCGAGAGTACCA+GGG - chr2.1:73722506-73722525 None:intergenic 60.0%
!! CCTAAGTGGGGTTGGCTACG+TGG - chr2.1:73721338-73721357 None:intergenic 60.0%
!! GGGGAGGTGTTGGCTCTATC+TGG + chr2.1:73723098-73723117 MS.gene02177:CDS 60.0%
CATAGGGCAGCTGGTGTCCC+TGG + chr2.1:73722486-73722505 MS.gene02177:CDS 65.0%
CCCAAGCTCCAACCGGCAAC+GGG - chr2.1:73719251-73719270 None:intergenic 65.0%
CGGCGTGGGATACCTTGGCT+TGG + chr2.1:73722253-73722272 MS.gene02177:CDS 65.0%
GCCCAAGCTCCAACCGGCAA+CGG - chr2.1:73719252-73719271 None:intergenic 65.0%
! CCCGTTGCCGGTTGGAGCTT+GGG + chr2.1:73719248-73719267 MS.gene02177:CDS 65.0%
!! GCAAGCGCTGCGAGAGTACC+AGG - chr2.1:73722507-73722526 None:intergenic 65.0%
! GCCCGTTGCCGGTTGGAGCT+TGG + chr2.1:73719247-73719266 MS.gene02177:CDS 70.0%
!! CACACCAGAGGCACCTGCCC+TGG + chr2.1:73720924-73720943 MS.gene02177:CDS 70.0%
GCAGCCAGGGCAGGTGCCTC+TGG - chr2.1:73720931-73720950 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 73718826 73723144 73718826 ID=MS.gene02177
chr2.1 mRNA 73718826 73723144 73718826 ID=MS.gene02177.t1;Parent=MS.gene02177
chr2.1 exon 73718826 73719641 73718826 ID=MS.gene02177.t1.exon1;Parent=MS.gene02177.t1
chr2.1 CDS 73718826 73719641 73718826 ID=cds.MS.gene02177.t1;Parent=MS.gene02177.t1
chr2.1 exon 73720727 73721040 73720727 ID=MS.gene02177.t1.exon2;Parent=MS.gene02177.t1
chr2.1 CDS 73720727 73721040 73720727 ID=cds.MS.gene02177.t1;Parent=MS.gene02177.t1
chr2.1 exon 73722152 73722600 73722152 ID=MS.gene02177.t1.exon3;Parent=MS.gene02177.t1
chr2.1 CDS 73722152 73722600 73722152 ID=cds.MS.gene02177.t1;Parent=MS.gene02177.t1
chr2.1 exon 73723029 73723144 73723029 ID=MS.gene02177.t1.exon4;Parent=MS.gene02177.t1
chr2.1 CDS 73723029 73723144 73723029 ID=cds.MS.gene02177.t1;Parent=MS.gene02177.t1
Gene Sequence

>MS.gene02177

ATGGAGAGTTTTGCACTTCACTCACTCTCCACAACTTCTTCACCTACCTTCTTCCTCCATCATCATCATCGTTCTTCACGACCCATCTTCAGATCTCAATTCTCTCTTCCACAAAACCCATCTCCACGTTCAATCCCATCCCTCAAATCATCACAATCCTTCTCTTTTCCCTCCAAAGTTTCAACCTTTAACCTTTTCTCAAAACCCCATTTCCCAATTCATGCTAATTCAACTCCACCACCTTCACAATCACCACCTTCAAAACCCAATATTCTTCAAGGTGCAAAGCCAATTCCTTTTGTCATTTCAATCTTGATTGGTCTCATTGTAAGGTTCTTTGTTCCTAAACCAGTTGAAGTTACACCTCAAGCATGGCAATTGCTTTCAATTTTCCTTTCAACTATAGCTGGCCTTGTGTTAAGCCCGTTGCCGGTTGGAGCTTGGGCTTTTCTTGGCCTGACAACATCCGTGGTCACAAAAACTCTAACCTTTACAGCTGCATTTAGTGCTTTTACTAATGAAGTTATTTGGTTGATTGTGATATCGTTTTTCTTCGCTCGCGGGTTTGTGAAGACGGGTTTAGGGGATAGAATTGCTACTTATTTTGTGAAATGGATGGGGAAGAGTACTTTAGGACTTTCTTATGGTTTGACATTTAGTGAAGTTCTTATTGCACCTGCTATGCCTAGTACTACTGCTAGAGCTGGTGGTGTTTTTTTGCCTATTATTAAGTCACTTTCACTCTCTGCTGGTAGTGAACCTAATAGTCCCTCCTCTAAGAGATTGGGAGCTTTTCTTATTCAGAACCAATTTCAGGTTTGGATTTACTCTCTCACTTTTTACTCTACTTCAGGTTAAGAGCTTAGTTTTGATATAATGTTAGTTTATAATGTTATACACGGTCAACAAACTACAATCGATTATATGATTGAATTGAGAAGTAGTTATGATTGAAATCGGATGTTTTTTAATGATCTGGTGACTGTGAATATAATGTGAGTTTAAAATGTTCTACACCGTCAAGAAATTACAATCGGTTATATTATTGACTTTAGAACTAGTTAGGATTGAAATCAAATGTTTTTAACGATCTGACACCTCTATATTTATTAGATGAAATGAAATTGTGTTCACCTTGCTAACATATATGTTAGATCACACATACACCGTATTTTGAATAAAAGACACACCTTTGCCTCTCAATTAAACATGATGGAAAGTGTGTCATTTAAGTACAATTCAGAGAAAGTGTGCTTTTCCCTAATTTTTGTGAGTTAAAGGAATGACTTGGCATGCTGTGATTACTGCAATACAAGCATGATCATTTCCTTTTTCTTTTTTCATGAACAATTCAATTATAAAATTGACATATAAATAGAGGTAACTTAAGGAGTTAATATAAGAACGTTTGATTTGAATGCAATTTTTTTTTTTTTTTAATGGAAAGTTCTATGACAAAATTTTCAGATGATTTAGTGAATACATTGAAGTGAAAAAAAACCATTTTACAGTTGAATATTTAACCAAATAATCACTCAGGATAGATTTCATGACATTTGTTTTTTCAAATTTCGCTTTCTTGTGAAACAACTCAGATGATATTGCCACCTTGGTGTACGCTTTTGCCTTGTAAAATTGTATTTTATTCTTGGTTCTGTTTTGATCCATGTATCCCACTCCACTCATTGGGATAAGGCTTGGTGGTGGTTGTTGTTGTATTGGTTGTGTTTTGATTTTATGAGACATGATGGCTTTCTGTATTGCTTTTTATAATTATGTATTCTCACTTCTCGGCAATGATCATCCTATACTATAATTTCACTGAACTCTCCTTCCACTTGCTGTATTTCTTGGTTGTGTCAATGAAATAACTTTTGTGTTGCCTTTGTGACATGTAACAGTCTGCCGGTAACTCCAGCGCTCTTTTCCTAACCGCTGCTGCTCAAAATCTGCTCTGTGTTAAATTAGCACAGGAGCTTGGGGTGGTAATTTCAAACCCTTGGGTTACGTGGTTTAAGGCAGCTAGTTTACCTGCATTTGTTTGTCTTCTTGCTACACCGTTGATTTTATACACGATCTATCCTCCTGAAATTAAAGACACACCAGAGGCACCTGCCCTGGCTGCAAAGAAACTGGAAACGATGGGCCCTGTCACACAAAATGAATGGGTTATGGTTGCTACAATGCTTCTTGCAGTCTCTTTGTGGATCTTTGGGTATGTCATATGCTTTCTACTGCATTAGTCTATCATTATTTTTGATTGAGTAAATGGTCTCATGGTGATGCTGAAAATATTGAACTTTGAAGGAAGAGTGTTTCTTCAAGTAATAATTTATAGTTTTTATCATTGTTTTAGCCTCCAGGTTTAAGCTCCTTTTCTCATATGCATATTAACTTTGGATATAGGAAATAATTGCTCTTTCGTTGAACATGAATTCTAATAAAATATTCTAATAACTAATCATATCAATAAAAAAAATTCTAATAAAATATTATGGTGCAATTTAATCCACGTAGCCAACCCCACTTAGGGCCTGTTTGGATTGACTTATTTGAGTTTATTTACTGACATAAGCACTTGTGTTTGGGAGAGCTTATGGAAACATCTTATGACATGTCCATAGGGAGTTTTCAGCTTATTTCCATAAGCTGACTCACTGGGATAGCTTATGAAAAAAGTTATTGGCTATTACTTGTATGAAAATTATCTTACTTTATTTTAAATTTTTGTTATAGAAATAGCTTATATATTAACACCTATTCCCTCTGTCCTAACTATAAGCTCCCTTGAAGAATTTTTTGTCTCTAAATTTAGCCCCCTATGCAATTTACTAGGTGCATTTTTTTTCTTCATACATGCCCCTTATTAATACTAATATATCTTGGAACGGAAGTTAGACATTTTAATATACTCAGGATATTATAAGAAGATCTACATACAAAAAGAACACATTAAATTCACTAACCATTTTTCTTAATATACGTGGAAAAAAAGGTAAGAGGTGCTTAGAAAAAGAGATGGAGGGAGTATATGATAAGCGCTTATATTATCAGTGCTTAATTAAACTGTTTATCCAAGTTGGAAAAGGCATCGACTGTTGTTGCGTATAATAAGTTATGATTATGATGTGATATCGTCATATCATTTGCAAATAGTTGTAGTTTATTTTATTTGATGTCTTCCCAAACTATACCTGTGCAAGTCATTATACCTTCTTTTATGTGTAAGAGTTCACTTGCTACATCTGTAGATTGTTGTTTCTCTCACAATGCAATTTCAACTAGTTGAATTCAATACTATCATTGGTATTTCTTTGGTCTTGCAGAGAGACTCTTGGCATAGCAAGTGCTGTAGCTGCAATGCTTGGTTTATCAATACTCCTCGTCTTAGGAGTCCTTGACTGGGATGACTGCTTGAATGAAAAATCGGCGTGGGATACCTTGGCTTGGTTTGCCATTCTAGTGGGTATGGCAAGCCAGTTGACAAACCTTGGGATTGTGAGCTGGATGTCTGATTGTGTGGCCAACAGCCTTCGATCGTTCTCCTTGAGCTGGCCGGCTTCATTGGCTGTTCTTCAGGCCGCTTATTTCTTCATCCACTACCTTTTTGCAAGCCAGACTGGGCATGTAGGGGCTTTATACTCTGCATTTCTTGCCATGCATAGGGCAGCTGGTGTCCCTGGTACTCTCGCAGCGCTTGCTTTAGGTTATAATACCAATCTTTTCGGTGCAATTACACACTATAGCAGTGGTCAAGCTGCTGTATACTATGGAGGTTTGTCCCTATCTATAACACGCCCGCCATATGATTTCTGTTTTTCTTTCCTGCGAATTAACTAATTAGCTCACATTTTTTCAGTAACTTTGTTTCAATTCCATACATTTACATTACATGTATTATTTATCCTTCCCTACGCTTCATTTCTGTTTGTTTAATGGTATAACTGGTGGATAGAAAATTATTTGTGATTTCAAAAACCTTCCAAAATAAATCTTTTTATTCTTATAAAGGTGATTTCTAGCTGCAATTAGTGACCAAAAGGCTATATTTGTTAAGGCAAAACTAATCTTTATGTGTCACCCTTTATACTTTGTGAATTTGACTTAAAGATATGTTGTGTCACCCTTTATACTTTGTGAATTTGACTTAAAGATATGTTGAAGTATGATAGCTGATGTGATTTCAATTCTTGTTTTTAACAGCTGGCTATGTAGACCTTCCTGATATATTCAAAACGGGTTTTATTATGGCATTTATTAATGCTGTCATCTGGGGAGGTGTTGGCTCTATCTGGTGGAAATTTTTAGGCTTGTATTAA
Protein sequence

>MS.gene02177.t1

MESFALHSLSTTSSPTFFLHHHHRSSRPIFRSQFSLPQNPSPRSIPSLKSSQSFSFPSKVSTFNLFSKPHFPIHANSTPPPSQSPPSKPNILQGAKPIPFVISILIGLIVRFFVPKPVEVTPQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTTSVVTKTLTFTAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEVLIAPAMPSTTARAGGVFLPIIKSLSLSAGSEPNSPSSKRLGAFLIQNQFQSAGNSSALFLTAAAQNLLCVKLAQELGVVISNPWVTWFKAASLPAFVCLLATPLILYTIYPPEIKDTPEAPALAAKKLETMGPVTQNEWVMVATMLLAVSLWIFGETLGIASAVAAMLGLSILLVLGVLDWDDCLNEKSAWDTLAWFAILVGMASQLTNLGIVSWMSDCVANSLRSFSLSWPASLAVLQAAYFFIHYLFASQTGHVGALYSAFLAMHRAAGVPGTLAALALGYNTNLFGAITHYSSGQAAVYYGAGYVDLPDIFKTGFIMAFINAVIWGGVGSIWWKFLGLY