Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022351.t1 | XP_003601182.1 | 99.3 | 413 | 3 | 0 | 2 | 414 | 3 | 415 | 2.00E-224 | 788.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022351.t1 | Q8H1F9 | 76.3 | 375 | 89 | 0 | 40 | 414 | 47 | 421 | 1.4e-165 | 583.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022351.t1 | G7J4A8 | 99.3 | 413 | 3 | 0 | 2 | 414 | 3 | 415 | 1.4e-224 | 788.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene022351 | MS.gene62819 | PPI |
MS.gene022351 | MS.gene033401 | PPI |
MS.gene022351 | MS.gene37226 | PPI |
MS.gene011448 | MS.gene022351 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022351.t1 | MTR_3g076930 | 99.274 | 413 | 3 | 0 | 2 | 414 | 3 | 415 | 0.0 | 844 |
MS.gene022351.t1 | MTR_7g088850 | 30.890 | 191 | 107 | 6 | 173 | 361 | 305 | 472 | 1.27e-19 | 91.3 |
MS.gene022351.t1 | MTR_7g088830 | 32.673 | 202 | 111 | 6 | 159 | 355 | 660 | 841 | 1.11e-17 | 85.9 |
MS.gene022351.t1 | MTR_7g088830 | 26.000 | 200 | 126 | 5 | 180 | 377 | 415 | 594 | 8.73e-11 | 64.3 |
MS.gene022351.t1 | MTR_2g086160 | 34.161 | 161 | 88 | 4 | 196 | 355 | 169 | 312 | 1.74e-17 | 83.6 |
MS.gene022351.t1 | MTR_4g053350 | 35.404 | 161 | 86 | 5 | 196 | 355 | 164 | 307 | 2.09e-17 | 84.0 |
MS.gene022351.t1 | MTR_4g053350 | 35.404 | 161 | 86 | 5 | 196 | 355 | 164 | 307 | 2.09e-17 | 84.0 |
MS.gene022351.t1 | MTR_2g086160 | 34.161 | 161 | 88 | 4 | 196 | 355 | 169 | 312 | 2.39e-17 | 84.0 |
MS.gene022351.t1 | MTR_2g095210 | 28.431 | 204 | 128 | 5 | 159 | 360 | 408 | 595 | 2.35e-16 | 81.6 |
MS.gene022351.t1 | MTR_7g101870 | 30.682 | 176 | 103 | 5 | 188 | 360 | 509 | 668 | 1.29e-15 | 79.3 |
MS.gene022351.t1 | MTR_1g063380 | 29.268 | 205 | 125 | 6 | 159 | 360 | 480 | 667 | 4.12e-15 | 77.8 |
MS.gene022351.t1 | MTR_2g095320 | 27.723 | 202 | 119 | 5 | 159 | 360 | 423 | 597 | 5.30e-15 | 77.4 |
MS.gene022351.t1 | MTR_7g089040 | 31.707 | 205 | 107 | 7 | 159 | 354 | 687 | 867 | 9.51e-15 | 77.0 |
MS.gene022351.t1 | MTR_7g088980 | 33.951 | 162 | 90 | 4 | 196 | 355 | 174 | 320 | 1.37e-14 | 75.5 |
MS.gene022351.t1 | MTR_7g088980 | 33.951 | 162 | 90 | 4 | 196 | 355 | 350 | 496 | 1.56e-14 | 75.9 |
MS.gene022351.t1 | MTR_4g096870 | 31.401 | 207 | 115 | 8 | 159 | 362 | 121 | 303 | 1.58e-14 | 75.1 |
MS.gene022351.t1 | MTR_7g088980 | 33.951 | 162 | 90 | 4 | 196 | 355 | 324 | 470 | 1.63e-14 | 75.9 |
MS.gene022351.t1 | MTR_7g088980 | 33.951 | 162 | 90 | 4 | 196 | 355 | 256 | 402 | 1.76e-14 | 75.5 |
MS.gene022351.t1 | MTR_4g094270 | 30.000 | 170 | 101 | 4 | 198 | 363 | 196 | 351 | 1.08e-13 | 72.8 |
MS.gene022351.t1 | MTR_4g011810 | 28.512 | 242 | 133 | 8 | 136 | 355 | 206 | 429 | 1.26e-13 | 72.8 |
MS.gene022351.t1 | MTR_6g033740 | 30.909 | 165 | 95 | 4 | 196 | 358 | 538 | 685 | 1.63e-13 | 72.8 |
MS.gene022351.t1 | MTR_8g099065 | 29.697 | 165 | 97 | 4 | 196 | 358 | 572 | 719 | 5.02e-13 | 71.6 |
MS.gene022351.t1 | MTR_1g101870 | 32.716 | 162 | 88 | 5 | 198 | 356 | 546 | 689 | 5.93e-13 | 71.2 |
MS.gene022351.t1 | MTR_1g101870 | 32.716 | 162 | 88 | 5 | 198 | 356 | 598 | 741 | 6.31e-13 | 71.2 |
MS.gene022351.t1 | MTR_5g009840 | 30.303 | 165 | 96 | 4 | 196 | 358 | 554 | 701 | 1.32e-12 | 70.1 |
MS.gene022351.t1 | MTR_2g024440 | 27.108 | 166 | 104 | 3 | 196 | 361 | 342 | 490 | 1.88e-12 | 69.3 |
MS.gene022351.t1 | MTR_2g024440 | 27.108 | 166 | 104 | 3 | 196 | 361 | 343 | 491 | 1.99e-12 | 69.3 |
MS.gene022351.t1 | MTR_2g024440 | 27.848 | 158 | 97 | 3 | 196 | 353 | 260 | 400 | 2.45e-12 | 68.9 |
MS.gene022351.t1 | MTR_7g010800 | 30.625 | 160 | 94 | 5 | 198 | 355 | 245 | 389 | 4.19e-12 | 68.6 |
MS.gene022351.t1 | MTR_3g092080 | 28.426 | 197 | 115 | 5 | 168 | 359 | 95 | 270 | 5.55e-12 | 67.0 |
MS.gene022351.t1 | MTR_3g092080 | 28.426 | 197 | 115 | 5 | 168 | 359 | 95 | 270 | 6.86e-12 | 67.0 |
MS.gene022351.t1 | MTR_7g089290 | 35.570 | 149 | 77 | 5 | 198 | 343 | 706 | 838 | 1.69e-11 | 66.6 |
MS.gene022351.t1 | MTR_7g089290 | 35.570 | 149 | 77 | 5 | 198 | 343 | 678 | 810 | 1.95e-11 | 66.6 |
MS.gene022351.t1 | MTR_1g099480 | 30.675 | 163 | 94 | 4 | 198 | 358 | 509 | 654 | 2.34e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022351.t1 | AT4G24710 | 75.781 | 384 | 92 | 1 | 31 | 414 | 51 | 433 | 0.0 | 606 |
MS.gene022351.t1 | AT4G24710 | 75.781 | 384 | 92 | 1 | 31 | 414 | 39 | 421 | 0.0 | 605 |
MS.gene022351.t1 | AT4G24710 | 81.788 | 302 | 54 | 1 | 31 | 332 | 51 | 351 | 2.06e-178 | 501 |
MS.gene022351.t1 | AT4G24710 | 81.788 | 302 | 54 | 1 | 31 | 332 | 51 | 351 | 2.06e-178 | 501 |
MS.gene022351.t1 | AT3G53230 | 28.922 | 204 | 127 | 5 | 159 | 360 | 480 | 667 | 3.45e-17 | 84.3 |
MS.gene022351.t1 | AT2G27600 | 34.783 | 161 | 87 | 5 | 196 | 355 | 166 | 309 | 1.04e-16 | 82.0 |
MS.gene022351.t1 | AT5G03340 | 28.431 | 204 | 128 | 5 | 159 | 360 | 479 | 666 | 1.93e-15 | 79.0 |
MS.gene022351.t1 | AT3G19740 | 33.750 | 160 | 87 | 4 | 198 | 355 | 742 | 884 | 3.76e-15 | 78.2 |
MS.gene022351.t1 | AT3G56690 | 30.734 | 218 | 124 | 7 | 143 | 355 | 709 | 904 | 5.99e-15 | 77.4 |
MS.gene022351.t1 | AT1G50140 | 33.125 | 160 | 88 | 4 | 198 | 355 | 730 | 872 | 6.99e-15 | 77.4 |
MS.gene022351.t1 | AT1G50140 | 33.125 | 160 | 88 | 4 | 198 | 355 | 730 | 872 | 6.99e-15 | 77.4 |
MS.gene022351.t1 | AT1G50140 | 33.125 | 160 | 88 | 4 | 198 | 355 | 752 | 894 | 7.50e-15 | 77.4 |
MS.gene022351.t1 | AT1G50140 | 33.125 | 160 | 88 | 4 | 198 | 355 | 752 | 894 | 7.50e-15 | 77.4 |
MS.gene022351.t1 | AT1G50140 | 33.125 | 160 | 88 | 4 | 198 | 355 | 752 | 894 | 7.50e-15 | 77.4 |
MS.gene022351.t1 | AT4G04180 | 27.976 | 168 | 104 | 4 | 196 | 363 | 357 | 507 | 1.30e-14 | 76.3 |
MS.gene022351.t1 | AT4G04180 | 27.976 | 168 | 104 | 4 | 196 | 363 | 362 | 512 | 1.50e-14 | 75.9 |
MS.gene022351.t1 | AT5G20000 | 30.000 | 170 | 101 | 4 | 198 | 363 | 198 | 353 | 3.22e-14 | 74.3 |
MS.gene022351.t1 | AT5G19990 | 30.000 | 170 | 101 | 4 | 198 | 363 | 198 | 353 | 3.43e-14 | 74.3 |
MS.gene022351.t1 | AT5G19990 | 30.000 | 170 | 101 | 4 | 198 | 363 | 198 | 353 | 3.43e-14 | 74.3 |
MS.gene022351.t1 | AT5G52882 | 27.723 | 202 | 102 | 5 | 196 | 395 | 552 | 711 | 3.57e-14 | 75.1 |
MS.gene022351.t1 | AT5G19990 | 30.000 | 170 | 101 | 4 | 198 | 363 | 140 | 295 | 3.59e-14 | 73.9 |
MS.gene022351.t1 | AT3G09840 | 29.143 | 175 | 108 | 3 | 188 | 360 | 507 | 667 | 4.22e-14 | 74.7 |
MS.gene022351.t1 | AT2G03670 | 29.612 | 206 | 114 | 6 | 159 | 355 | 285 | 468 | 6.74e-14 | 73.9 |
MS.gene022351.t1 | AT2G03670 | 31.176 | 170 | 95 | 6 | 192 | 355 | 53 | 206 | 2.96e-12 | 68.9 |
MS.gene022351.t1 | AT4G28000 | 29.697 | 165 | 97 | 4 | 196 | 358 | 553 | 700 | 3.07e-13 | 72.0 |
MS.gene022351.t1 | AT1G64110 | 29.697 | 165 | 97 | 4 | 196 | 358 | 551 | 698 | 3.12e-13 | 72.0 |
MS.gene022351.t1 | AT1G64110 | 29.697 | 165 | 97 | 4 | 196 | 358 | 556 | 703 | 3.12e-13 | 72.0 |
MS.gene022351.t1 | AT1G64110 | 29.697 | 165 | 97 | 4 | 196 | 358 | 556 | 703 | 3.12e-13 | 72.0 |
MS.gene022351.t1 | AT1G64110 | 29.697 | 165 | 97 | 4 | 196 | 358 | 554 | 701 | 3.20e-13 | 72.0 |
MS.gene022351.t1 | AT1G64110 | 29.697 | 165 | 97 | 4 | 196 | 358 | 554 | 701 | 3.20e-13 | 72.0 |
MS.gene022351.t1 | AT4G28000 | 29.697 | 165 | 97 | 4 | 196 | 358 | 555 | 702 | 3.33e-13 | 72.0 |
MS.gene022351.t1 | AT4G28000 | 29.697 | 165 | 97 | 4 | 196 | 358 | 555 | 702 | 3.77e-13 | 72.0 |
MS.gene022351.t1 | AT2G03670 | 31.176 | 170 | 95 | 6 | 192 | 355 | 53 | 206 | 2.06e-12 | 68.9 |
MS.gene022351.t1 | AT4G04910 | 26.455 | 189 | 124 | 5 | 172 | 355 | 227 | 405 | 4.35e-12 | 68.6 |
MS.gene022351.t1 | AT5G53540 | 29.091 | 165 | 95 | 4 | 198 | 359 | 125 | 270 | 1.22e-11 | 66.2 |
MS.gene022351.t1 | AT3G15120 | 31.220 | 205 | 124 | 8 | 152 | 354 | 722 | 911 | 3.08e-11 | 66.2 |
MS.gene022351.t1 | AT3G15120 | 31.220 | 205 | 124 | 8 | 152 | 354 | 712 | 901 | 3.11e-11 | 66.2 |
MS.gene022351.t1 | AT1G03000 | 35.570 | 149 | 77 | 5 | 198 | 343 | 694 | 826 | 5.12e-11 | 65.1 |
Find 100 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTACCATTTCTTGAATCTTT+TGG | 0.163133 | 3.4:+73976212 | None:intergenic |
CACATTCTTTGTTCAGTAAA+TGG | 0.170120 | 3.4:-73978116 | MS.gene022351:CDS |
GCCTGTAGTACATGTCTTTC+AGG | 0.195452 | 3.4:-73979428 | MS.gene022351:intron |
TTAGACCAGATTCATATATT+AGG | 0.259717 | 3.4:+73978655 | None:intergenic |
CCGAACCTTCTGATTCTATT+CGG | 0.296498 | 3.4:-73976022 | MS.gene022351:CDS |
GTGGTTAGAATTATCACATT+TGG | 0.315571 | 3.4:+73975776 | None:intergenic |
CTTCCTGCAAAAGAATTTGA+TGG | 0.316919 | 3.4:-73978789 | MS.gene022351:CDS |
CGAACCTTCTGATTCTATTC+GGG | 0.329197 | 3.4:-73976021 | MS.gene022351:intron |
GGGAAGCTACGGCGCCGTTT+TGG | 0.331773 | 3.4:+73980494 | None:intergenic |
TTGATCCATTCCTTGTTTCA+TGG | 0.336034 | 3.4:-73978578 | MS.gene022351:CDS |
AGAATTTGCGTTTGTGATAC+AGG | 0.336533 | 3.4:-73979985 | MS.gene022351:intron |
CATTCCTTGTTTCATGGAAC+CGG | 0.365098 | 3.4:-73978572 | MS.gene022351:intron |
AAGAGGAGTTTGAGCTATAA+TGG | 0.374339 | 3.4:-73980060 | MS.gene022351:CDS |
TGCAGCCTAATATATGAATC+TGG | 0.381687 | 3.4:-73978660 | MS.gene022351:intron |
TTTCCAAAAGATTCAAGAAA+TGG | 0.384973 | 3.4:-73976215 | MS.gene022351:CDS |
GCATACCAGCTTCCCACTTT+CGG | 0.391492 | 3.4:+73978089 | None:intergenic |
AAGCCCGGTATGAAATATTA+AGG | 0.392685 | 3.4:-73975205 | MS.gene022351:CDS |
GTAGTAGCTTCATGAAAATC+TGG | 0.399069 | 3.4:+73974949 | None:intergenic |
TCGTCAAGGGGAACGGGAAT+CGG | 0.406300 | 3.4:+73980033 | None:intergenic |
TTGCACATTATCTGCAAGAA+AGG | 0.411537 | 3.4:+73980008 | None:intergenic |
AGTAAATGGTTCTCCGAAAG+TGG | 0.417358 | 3.4:-73978102 | MS.gene022351:CDS |
GCTAGAAAAGCTGCTTTGTC+TGG | 0.421700 | 3.4:-73976047 | MS.gene022351:CDS |
AGTCTTCTAGCTTCAATGAA+TGG | 0.432368 | 3.4:-73978815 | MS.gene022351:CDS |
CTTTGACAGCTTAGCGAAGA+AGG | 0.439270 | 3.4:-73978867 | MS.gene022351:intron |
AAGGGTTCGTCAAGGGGAAC+GGG | 0.442722 | 3.4:+73980027 | None:intergenic |
TGCTTTACTCTTCACTGAAA+AGG | 0.448394 | 3.4:-73978604 | MS.gene022351:CDS |
CCGAATAGAATCAGAAGGTT+CGG | 0.463353 | 3.4:+73976022 | None:intergenic |
GGTAGAGGAAGAAGGCAATC+TGG | 0.464540 | 3.4:-73976194 | MS.gene022351:CDS |
CAATGCATTATTAACTCAGA+TGG | 0.466410 | 3.4:-73975816 | MS.gene022351:CDS |
TCCTCCGGTGGAAGAGGAGG+AGG | 0.471701 | 3.4:+73980445 | None:intergenic |
GATGTCCGTTCCGCCGTTGA+GGG | 0.473816 | 3.4:-73980277 | MS.gene022351:CDS |
TGCTCCGTCTCCATTGGACT+AGG | 0.480792 | 3.4:+73980532 | None:intergenic |
GTGCATTCACTTCAACAAGC+TGG | 0.486304 | 3.4:+73978136 | None:intergenic |
TGCACATTATCTGCAAGAAA+GGG | 0.489264 | 3.4:+73980009 | None:intergenic |
AATATTAAGGTCTTGTGTGC+AGG | 0.492194 | 3.4:-73975192 | MS.gene022351:CDS |
CAATGCACCTCGAATTGAAT+CGG | 0.492486 | 3.4:+73978260 | None:intergenic |
TCCGGTGGAAGAGGAGGAGG+GGG | 0.493517 | 3.4:+73980448 | None:intergenic |
AAGACCTTAATATTTCATAC+CGG | 0.493523 | 3.4:+73975201 | None:intergenic |
TCATACCGGGCTTGAAGAGT+TGG | 0.496365 | 3.4:+73975215 | None:intergenic |
ATCGTGAATTGAAGCTGTGC+TGG | 0.497938 | 3.4:+73980297 | None:intergenic |
TGTCAATCCGATTCAATTCG+AGG | 0.498172 | 3.4:-73978267 | MS.gene022351:intron |
AAAGGGTTCGTCAAGGGGAA+CGG | 0.504383 | 3.4:+73980026 | None:intergenic |
TGGTGGTAGAGGTGAACGTT+GGG | 0.507649 | 3.4:+73980474 | None:intergenic |
TACCGGGCTTGAAGAGTTGG+TGG | 0.509140 | 3.4:+73975218 | None:intergenic |
CGATGTCCGTTCCGCCGTTG+AGG | 0.509936 | 3.4:-73980278 | MS.gene022351:CDS |
GTGCAGGAACTTATGCGTAC+AGG | 0.512151 | 3.4:-73975176 | MS.gene022351:CDS |
GTTCTCCGAAAGTGGGAAGC+TGG | 0.513645 | 3.4:-73978094 | MS.gene022351:intron |
TGCAAGAAAGGGTTCGTCAA+GGG | 0.514065 | 3.4:+73980020 | None:intergenic |
AACCCTACGACCGACCAAAA+CGG | 0.518371 | 3.4:-73980508 | MS.gene022351:CDS |
TGCATTCACTTCAACAAGCT+GGG | 0.518386 | 3.4:+73978137 | None:intergenic |
ACCTGAAAGACATGTACTAC+AGG | 0.522775 | 3.4:+73979427 | None:intergenic |
AATTTGATGGCATGTGGGAA+AGG | 0.528949 | 3.4:-73978776 | MS.gene022351:intron |
AAAGACGTCTTTCCAGTCCC+AGG | 0.535392 | 3.4:+73978313 | None:intergenic |
CAAGAAATGGTAGAGGAAGA+AGG | 0.537039 | 3.4:-73976202 | MS.gene022351:CDS |
ATGGTGGTAGAGGTGAACGT+TGG | 0.542015 | 3.4:+73980473 | None:intergenic |
CTTCAACAAGCTGGGCCTGT+GGG | 0.542287 | 3.4:+73978145 | None:intergenic |
AGGTGAACGTTGGGAAGCTA+CGG | 0.544888 | 3.4:+73980483 | None:intergenic |
GCCCACCAACTCTTCAAGCC+CGG | 0.546674 | 3.4:-73975220 | MS.gene022351:CDS |
TCCAACATTACTGCTGCTAT+CGG | 0.546949 | 3.4:-73975752 | MS.gene022351:intron |
CCCTCCTCCTCTTCCACCGG+AGG | 0.551215 | 3.4:-73980446 | MS.gene022351:CDS |
TTTCCCACTCAGATTCCCAC+AGG | 0.553521 | 3.4:-73978160 | MS.gene022351:intron |
ATTCATTGAAGCTAGAAGAC+TGG | 0.559709 | 3.4:+73978817 | None:intergenic |
ACTTCAACAAGCTGGGCCTG+TGG | 0.562535 | 3.4:+73978144 | None:intergenic |
TGCAGGAACTTATGCGTACA+GGG | 0.563349 | 3.4:-73975175 | MS.gene022351:CDS |
ATTACCCCTCAACGGCGGAA+CGG | 0.564389 | 3.4:+73980272 | None:intergenic |
ACCGATAGCAGCAGTAATGT+TGG | 0.565609 | 3.4:+73975751 | None:intergenic |
ATGTCCGTTCCGCCGTTGAG+GGG | 0.566371 | 3.4:-73980276 | MS.gene022351:intron |
CGGTTCCATGAAACAAGGAA+TGG | 0.570883 | 3.4:+73978573 | None:intergenic |
CTCCGGTGGAAGAGGAGGAG+GGG | 0.573112 | 3.4:+73980447 | None:intergenic |
GCTGATATCAAAGCATATGT+TGG | 0.577084 | 3.4:-73975242 | MS.gene022351:CDS |
AAAGATTCAAGAAATGGTAG+AGG | 0.577519 | 3.4:-73976209 | MS.gene022351:CDS |
AGCAGCAGTAATGTTGGATG+TGG | 0.577677 | 3.4:+73975757 | None:intergenic |
CCTCCGGTGGAAGAGGAGGA+GGG | 0.577752 | 3.4:+73980446 | None:intergenic |
TGTGAGGATATCAGCTCTGA+TGG | 0.579798 | 3.4:-73978840 | MS.gene022351:CDS |
TTCTCCTAGTCCAATGGAGA+CGG | 0.580470 | 3.4:-73980536 | MS.gene022351:CDS |
GAGCACTTCTCCTAGTCCAA+TGG | 0.582713 | 3.4:-73980542 | MS.gene022351:CDS |
GCAAGAAAGGGTTCGTCAAG+GGG | 0.584552 | 3.4:+73980021 | None:intergenic |
CAAAAGAATTTGATGGCATG+TGG | 0.585350 | 3.4:-73978782 | MS.gene022351:CDS |
ATGAATCTGGTCTAAAGCAA+AGG | 0.586924 | 3.4:-73978647 | MS.gene022351:CDS |
AGACCTTAATATTTCATACC+GGG | 0.587758 | 3.4:+73975202 | None:intergenic |
TTTACCCGAATAGAATCAGA+AGG | 0.588127 | 3.4:+73976017 | None:intergenic |
AAGACGTCTTTCCAGTCCCA+GGG | 0.593674 | 3.4:+73978314 | None:intergenic |
GTCTAAAGCAAAGGTTGCTG+CGG | 0.601511 | 3.4:-73978638 | MS.gene022351:CDS |
GAGGATAAAATTCTCGTCCC+TGG | 0.601718 | 3.4:-73980427 | MS.gene022351:intron |
TTATCCTCCGGTGGAAGAGG+AGG | 0.607446 | 3.4:+73980442 | None:intergenic |
CTGCAAGAAAGGGTTCGTCA+AGG | 0.618408 | 3.4:+73980019 | None:intergenic |
GTAAATGGTTCTCCGAAAGT+GGG | 0.626891 | 3.4:-73978101 | MS.gene022351:CDS |
CTCACCGGTTCCATGAAACA+AGG | 0.629691 | 3.4:+73978568 | None:intergenic |
TGAAACTGCAGAGGCATGTG+AGG | 0.639294 | 3.4:-73974899 | None:intergenic |
GAAATTAGTTGAAACTGCAG+AGG | 0.644635 | 3.4:-73974908 | MS.gene022351:CDS |
TAGCGAAGAAGGACCGTGTG+AGG | 0.645973 | 3.4:-73978856 | MS.gene022351:CDS |
TGAATTGAAGCTGTGCTGGA+AGG | 0.649944 | 3.4:+73980301 | None:intergenic |
ACCGGGCTTGAAGAGTTGGT+GGG | 0.651440 | 3.4:+73975219 | None:intergenic |
AAAAGAATTTGATGGCATGT+GGG | 0.664280 | 3.4:-73978781 | MS.gene022351:CDS |
AGGAGTTTGAGCTATAATGG+TGG | 0.669249 | 3.4:-73980057 | MS.gene022351:CDS |
GATAGATTATTACCCCTCAA+CGG | 0.678759 | 3.4:+73980264 | None:intergenic |
AGACGTCTTTCCAGTCCCAG+GGG | 0.712576 | 3.4:+73978315 | None:intergenic |
GACGTCTTTCCAGTCCCAGG+GGG | 0.718244 | 3.4:+73978316 | None:intergenic |
AGATTATTACCCCTCAACGG+CGG | 0.725535 | 3.4:+73980267 | None:intergenic |
TCAGAGCTGATATCCTCACA+CGG | 0.742150 | 3.4:+73978843 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTTTTTATTTTTAAAAA+GGG | - | chr3.4:73978493-73978512 | MS.gene022351:intron | 0.0% |
!!! | TATATTTTTTATTTTTAAAA+AGG | - | chr3.4:73978492-73978511 | MS.gene022351:intron | 0.0% |
!! | AACTATCAATATAATATTTA+TGG | + | chr3.4:73979788-73979807 | None:intergenic | 10.0% |
!! | ACTATCAATATAATATTTAT+GGG | + | chr3.4:73979787-73979806 | None:intergenic | 10.0% |
!! | TAATAATAAGATGTAATAAA+TGG | + | chr3.4:73978084-73978103 | None:intergenic | 10.0% |
!! | TTAATAATCTAATCTTTATT+TGG | - | chr3.4:73980362-73980381 | MS.gene022351:intron | 10.0% |
!!! | ACTAATTTTAATTATTCTAT+CGG | - | chr3.4:73975304-73975323 | MS.gene022351:intron | 10.0% |
!!! | AGTAACTTTTTATTTTTTAT+AGG | - | chr3.4:73975948-73975967 | MS.gene022351:intron | 10.0% |
!!! | ATATGTATTTATTTTTGTAT+TGG | - | chr3.4:73976907-73976926 | MS.gene022351:intron | 10.0% |
!! | AAATATTAAGATATGTTCAT+AGG | + | chr3.4:73977066-73977085 | None:intergenic | 15.0% |
!! | GTTTCAAATGAAAATATATT+GGG | + | chr3.4:73980113-73980132 | None:intergenic | 15.0% |
!! | TGTATTAAAAAGCAAAAAAA+TGG | - | chr3.4:73978006-73978025 | MS.gene022351:intron | 15.0% |
!! | TTTCAAATGAAAATATATTG+GGG | + | chr3.4:73980112-73980131 | None:intergenic | 15.0% |
!!! | AAAAAAAAAAGTATACCAAA+TGG | - | chr3.4:73978817-73978836 | MS.gene022351:CDS | 15.0% |
!!! | AATTTTTATCCATCATATAA+AGG | + | chr3.4:73977758-73977777 | None:intergenic | 15.0% |
!!! | ATTTTAGTTTGTTAATCTAA+TGG | - | chr3.4:73980393-73980412 | MS.gene022351:intron | 15.0% |
!!! | CTAATTTTAATTATTCTATC+GGG | - | chr3.4:73975305-73975324 | MS.gene022351:intron | 15.0% |
!!! | GAACATATCTTAATATTTTT+AGG | - | chr3.4:73977068-73977087 | MS.gene022351:intron | 15.0% |
!!! | TTATTTTGTTATAGTTTCTA+GGG | - | chr3.4:73975214-73975233 | MS.gene022351:CDS | 15.0% |
!!! | TTTATTTTCAATTGTTTGTA+TGG | - | chr3.4:73975496-73975515 | MS.gene022351:intron | 15.0% |
!!! | TTTATTTTGTTATAGTTTCT+AGG | - | chr3.4:73975213-73975232 | MS.gene022351:CDS | 15.0% |
!!! | TTTTATTTTTTATAGGTGAA+GGG | - | chr3.4:73975955-73975974 | MS.gene022351:intron | 15.0% |
!!! | TTTTTATTTTTTATAGGTGA+AGG | - | chr3.4:73975954-73975973 | MS.gene022351:intron | 15.0% |
!! | AGCTTCAATGTTTATTATAT+TGG | - | chr3.4:73977459-73977478 | MS.gene022351:intron | 20.0% |
!! | ATATATTCAATGAGCATATA+TGG | - | chr3.4:73976128-73976147 | MS.gene022351:intron | 20.0% |
!! | ATTACATCTTATTATTAGTC+TGG | - | chr3.4:73978087-73978106 | MS.gene022351:intron | 20.0% |
!! | ATTGAAAACAAGTAAATGAA+GGG | - | chr3.4:73977239-73977258 | MS.gene022351:intron | 20.0% |
!! | CGTTTCAAATGAAAATATAT+TGG | + | chr3.4:73980114-73980133 | None:intergenic | 20.0% |
!! | GTAAATTACATGTATCATTT+AGG | - | chr3.4:73978962-73978981 | MS.gene022351:intron | 20.0% |
!! | TAAATGACCGTAAAAAAAAT+GGG | - | chr3.4:73979891-73979910 | MS.gene022351:intron | 20.0% |
!! | TATAAGAGAAACTATTAAGA+AGG | + | chr3.4:73978369-73978388 | None:intergenic | 20.0% |
!! | TGAATTTATGATAATTCAAC+TGG | - | chr3.4:73975343-73975362 | MS.gene022351:intron | 20.0% |
!! | TGATACTATTAAGAGATTAT+TGG | + | chr3.4:73979040-73979059 | None:intergenic | 20.0% |
!! | TTAAATGACCGTAAAAAAAA+TGG | - | chr3.4:73979890-73979909 | MS.gene022351:intron | 20.0% |
!! | TTCTATCATAAACCATATTT+CGG | - | chr3.4:73978321-73978340 | MS.gene022351:CDS | 20.0% |
!!! | ATAGAAATTGATTTTCTTTG+TGG | - | chr3.4:73975240-73975259 | MS.gene022351:CDS | 20.0% |
!!! | TCACTTTAAACGATTTTTTT+TGG | - | chr3.4:73975733-73975752 | MS.gene022351:intron | 20.0% |
!!! | TGATTTTATTGCTATCATTA+TGG | - | chr3.4:73975530-73975549 | MS.gene022351:intron | 20.0% |
!!! | TTTGTGTTTTTAAATCCAAA+AGG | - | chr3.4:73976166-73976185 | MS.gene022351:intron | 20.0% |
!!! | TTTTGGATTTAAAAACACAA+AGG | + | chr3.4:73976167-73976186 | None:intergenic | 20.0% |
! | AAATATTATCCAGGGAAAAA+TGG | + | chr3.4:73978889-73978908 | None:intergenic | 25.0% |
! | AACATGCATATAGTAAACAA+AGG | - | chr3.4:73976395-73976414 | MS.gene022351:intron | 25.0% |
! | AAGACCTTAATATTTCATAC+CGG | + | chr3.4:73980246-73980265 | None:intergenic | 25.0% |
! | AATCACTAAATCCTCATTAA+GGG | + | chr3.4:73979872-73979891 | None:intergenic | 25.0% |
! | AATTACATGTATCATTTAGG+TGG | - | chr3.4:73978965-73978984 | MS.gene022351:intron | 25.0% |
! | AATTGGAATCTATAGAATAG+AGG | + | chr3.4:73975070-73975089 | None:intergenic | 25.0% |
! | ACAGAGATTAATAAGTCAAT+TGG | - | chr3.4:73979098-73979117 | MS.gene022351:intron | 25.0% |
! | ACGAAAATTAGTTGAGAAAT+TGG | + | chr3.4:73975087-73975106 | None:intergenic | 25.0% |
! | ACTACCATACTAACAATAAA+TGG | - | chr3.4:73978415-73978434 | MS.gene022351:intron | 25.0% |
! | AGAAGTAATGACTTCTTTAT+GGG | - | chr3.4:73979558-73979577 | MS.gene022351:intron | 25.0% |
! | AGATTATTGGACTATAGTTA+AGG | + | chr3.4:73979027-73979046 | None:intergenic | 25.0% |
! | ATATGATTATGGTAGTACAT+AGG | + | chr3.4:73978233-73978252 | None:intergenic | 25.0% |
! | ATATTAGTCAAGCAAAGATA+TGG | + | chr3.4:73976112-73976131 | None:intergenic | 25.0% |
! | ATCAAGAAAACTATAGTTGA+GGG | + | chr3.4:73976722-73976741 | None:intergenic | 25.0% |
! | ATGAACAGAAAATATTATCC+AGG | + | chr3.4:73978898-73978917 | None:intergenic | 25.0% |
! | ATGACAGAAACTTAAAGTAA+AGG | + | chr3.4:73977388-73977407 | None:intergenic | 25.0% |
! | ATGTGCTTTATGTTAAAGTA+AGG | + | chr3.4:73980012-73980031 | None:intergenic | 25.0% |
! | ATTACATGTATCATTTAGGT+GGG | - | chr3.4:73978966-73978985 | MS.gene022351:intron | 25.0% |
! | CAATCTGAATATTCAATTTC+AGG | - | chr3.4:73979601-73979620 | MS.gene022351:intron | 25.0% |
! | CATTGAAAACAAGTAAATGA+AGG | - | chr3.4:73977238-73977257 | MS.gene022351:intron | 25.0% |
! | GAATACATGTGATTAAACAT+AGG | + | chr3.4:73978786-73978805 | None:intergenic | 25.0% |
! | GATTATTGGACTATAGTTAA+GGG | + | chr3.4:73979026-73979045 | None:intergenic | 25.0% |
! | TAATAAACATTGAAGCTAGT+AGG | + | chr3.4:73977456-73977475 | None:intergenic | 25.0% |
! | TAATCACTAAATCCTCATTA+AGG | + | chr3.4:73979873-73979892 | None:intergenic | 25.0% |
! | TAGCAATTAGTATGTCAATA+TGG | - | chr3.4:73975833-73975852 | MS.gene022351:intron | 25.0% |
! | TATCAAGAAAACTATAGTTG+AGG | + | chr3.4:73976723-73976742 | None:intergenic | 25.0% |
! | TGAACAGAAAATATTATCCA+GGG | + | chr3.4:73978897-73978916 | None:intergenic | 25.0% |
! | TGGTTTATGATAGAACATTA+TGG | + | chr3.4:73978316-73978335 | None:intergenic | 25.0% |
! | TTAGACCAGATTCATATATT+AGG | + | chr3.4:73976792-73976811 | None:intergenic | 25.0% |
! | TTCATAGTTAATATGCTTCA+TGG | + | chr3.4:73978686-73978705 | None:intergenic | 25.0% |
! | TTCTCAATTTCACAACAAAA+GGG | + | chr3.4:73975690-73975709 | None:intergenic | 25.0% |
! | TTCTTGTATAACGAAATAAG+TGG | - | chr3.4:73978583-73978602 | MS.gene022351:CDS | 25.0% |
! | TTTCCAAAAGATTCAAGAAA+TGG | - | chr3.4:73979229-73979248 | MS.gene022351:intron | 25.0% |
!! | AGGGATATTAACTAATTTTG+AGG | - | chr3.4:73980288-73980307 | MS.gene022351:CDS | 25.0% |
!! | ATAAAAGCGTGAATTACAAA+AGG | + | chr3.4:73977431-73977450 | None:intergenic | 25.0% |
!! | ATTTTCAATTGTTTGTATGG+TGG | - | chr3.4:73975499-73975518 | MS.gene022351:intron | 25.0% |
!! | GATCATGAAGAAACTATTTT+AGG | + | chr3.4:73980084-73980103 | None:intergenic | 25.0% |
!! | GTTGTTGTTCTATATGATTA+TGG | + | chr3.4:73978244-73978263 | None:intergenic | 25.0% |
!! | GTTTCTCTTATAGTTTTTCT+AGG | - | chr3.4:73978377-73978396 | MS.gene022351:intron | 25.0% |
!! | TATCATTTGACTATCTGTTT+TGG | - | chr3.4:73979055-73979074 | MS.gene022351:intron | 25.0% |
!! | TTCATTTTCGAAAAAGATTC+CGG | + | chr3.4:73980337-73980356 | None:intergenic | 25.0% |
!!! | AAACTATTTTAGGAAGACAT+TGG | + | chr3.4:73980074-73980093 | None:intergenic | 25.0% |
!!! | AATCTGGTATTTGTTTTGAT+CGG | - | chr3.4:73979266-73979285 | MS.gene022351:intron | 25.0% |
!!! | ACTATCTGTTTTGGAATTTA+AGG | - | chr3.4:73979064-73979083 | MS.gene022351:intron | 25.0% |
!!! | ATTTTCTTTTTCATCCTGTA+TGG | + | chr3.4:73978469-73978488 | None:intergenic | 25.0% |
!!! | CTTTTGTTACTTTCTCTTTT+CGG | + | chr3.4:73976362-73976381 | None:intergenic | 25.0% |
!!! | GAATCTTTTTCGAAAATGAA+AGG | - | chr3.4:73980337-73980356 | MS.gene022351:intron | 25.0% |
!!! | GAGTAATTTTGACTAAATGT+GGG | - | chr3.4:73975755-73975774 | MS.gene022351:CDS | 25.0% |
!!! | GATAATTCAACTGGTTTTTT+AGG | - | chr3.4:73975352-73975371 | MS.gene022351:intron | 25.0% |
!!! | TTTGATTTTACGTTTACTCA+CGG | - | chr3.4:73975646-73975665 | MS.gene022351:intron | 25.0% |
!!! | TTTTCTTTTTCATCCTGTAT+GGG | + | chr3.4:73978468-73978487 | None:intergenic | 25.0% |
AAAAGGTGATAAGCTTCAAT+CGG | - | chr3.4:73976183-73976202 | MS.gene022351:CDS | 30.0% | |
AAACACAAAGGAAAAACCAT+AGG | + | chr3.4:73976155-73976174 | None:intergenic | 30.0% | |
AAAGATTCAAGAAATGGTAG+AGG | - | chr3.4:73979235-73979254 | MS.gene022351:intron | 30.0% | |
AAATTCTAACTACCAAACAG+TGG | + | chr3.4:73977611-73977630 | None:intergenic | 30.0% | |
AATTCTAACTACCAAACAGT+GGG | + | chr3.4:73977610-73977629 | None:intergenic | 30.0% | |
ACACAACAAAACTACAACTT+TGG | + | chr3.4:73979165-73979184 | None:intergenic | 30.0% | |
ACATCATAAGACAGTCTTAA+TGG | + | chr3.4:73975625-73975644 | None:intergenic | 30.0% | |
ACTAAGCAAAGTACAATTAG+AGG | + | chr3.4:73976497-73976516 | None:intergenic | 30.0% | |
AGACCTTAATATTTCATACC+GGG | + | chr3.4:73980245-73980264 | None:intergenic | 30.0% | |
AGTATGTCAATATGGAAGAT+AGG | - | chr3.4:73975841-73975860 | MS.gene022351:intron | 30.0% | |
AGTTGTGATCACAACATATA+AGG | + | chr3.4:73976933-73976952 | None:intergenic | 30.0% | |
ATCTCTTTGTTCTGTTAATG+TGG | - | chr3.4:73976522-73976541 | MS.gene022351:intron | 30.0% | |
ATGAAAATATATTGGGGAAG+TGG | + | chr3.4:73980106-73980125 | None:intergenic | 30.0% | |
ATGGGTGTCTGTAATAATAT+GGG | - | chr3.4:73979576-73979595 | MS.gene022351:intron | 30.0% | |
ATGTTTGCAGTATCCATAAT+AGG | + | chr3.4:73978852-73978871 | None:intergenic | 30.0% | |
CAAAACACTTTATCAATGCA+CGG | + | chr3.4:73977890-73977909 | None:intergenic | 30.0% | |
CAATGCATTATTAACTCAGA+TGG | - | chr3.4:73979628-73979647 | MS.gene022351:intron | 30.0% | |
CACATTCTTTGTTCAGTAAA+TGG | - | chr3.4:73977328-73977347 | MS.gene022351:intron | 30.0% | |
CAGAAGTAATGACTTCTTTA+TGG | - | chr3.4:73979557-73979576 | MS.gene022351:intron | 30.0% | |
CCATCATATAAAGGTAGAAT+GGG | + | chr3.4:73977749-73977768 | None:intergenic | 30.0% | |
CTAAGCAAAGTACAATTAGA+GGG | + | chr3.4:73976496-73976515 | None:intergenic | 30.0% | |
CTTCTCAATTTCACAACAAA+AGG | + | chr3.4:73975691-73975710 | None:intergenic | 30.0% | |
CTTTAACTATTAGCTAGCAT+TGG | - | chr3.4:73977706-73977725 | MS.gene022351:intron | 30.0% | |
GAAGCATATTAACTATGAAG+AGG | - | chr3.4:73978687-73978706 | MS.gene022351:intron | 30.0% | |
GAATGATGAGAAAGTGATAT+AGG | + | chr3.4:73979722-73979741 | None:intergenic | 30.0% | |
GTATCCATAATAGGATTATG+TGG | + | chr3.4:73978843-73978862 | None:intergenic | 30.0% | |
GTCTTAATGGAACTTTAGAT+TGG | + | chr3.4:73975612-73975631 | None:intergenic | 30.0% | |
GTGGTTAGAATTATCACATT+TGG | + | chr3.4:73979671-73979690 | None:intergenic | 30.0% | |
GTTTATTATATTGGTGAGCT+TGG | - | chr3.4:73977468-73977487 | MS.gene022351:intron | 30.0% | |
TAATGGGGGAAGTTTATTAT+GGG | + | chr3.4:73976263-73976282 | None:intergenic | 30.0% | |
TAGACTGATGTATAATGACA+AGG | + | chr3.4:73979819-73979838 | None:intergenic | 30.0% | |
TATGGGTGTCTGTAATAATA+TGG | - | chr3.4:73979575-73979594 | MS.gene022351:intron | 30.0% | |
TATTGTTAGTATGGTAGTAG+AGG | + | chr3.4:73978413-73978432 | None:intergenic | 30.0% | |
TCCATCATATAAAGGTAGAA+TGG | + | chr3.4:73977750-73977769 | None:intergenic | 30.0% | |
TCTTAGAGGATTATTATGCT+GGG | - | chr3.4:73977803-73977822 | MS.gene022351:intron | 30.0% | |
TGATCAGTCTATATTGTCTA+GGG | + | chr3.4:73975902-73975921 | None:intergenic | 30.0% | |
TGTGTCTTCAAACATAAAGT+TGG | + | chr3.4:73977782-73977801 | None:intergenic | 30.0% | |
TTATTGCTATCATTATGGAG+TGG | - | chr3.4:73975535-73975554 | MS.gene022351:intron | 30.0% | |
TTCAGGAAAAATAGGTTCAT+CGG | - | chr3.4:73977928-73977947 | MS.gene022351:intron | 30.0% | |
TTCATTGTGATTGGTACTTT+CGG | - | chr3.4:73978040-73978059 | MS.gene022351:intron | 30.0% | |
TTCTTAGAGGATTATTATGC+TGG | - | chr3.4:73977802-73977821 | MS.gene022351:intron | 30.0% | |
TTGATATCAAGCTTGATCAA+AGG | - | chr3.4:73977556-73977575 | MS.gene022351:intron | 30.0% | |
TTGATCAGTCTATATTGTCT+AGG | + | chr3.4:73975903-73975922 | None:intergenic | 30.0% | |
! | AAAACCTTTTTCCACTAGTT+AGG | - | chr3.4:73980039-73980058 | MS.gene022351:CDS | 30.0% |
! | AAAAGAATTTGATGGCATGT+GGG | - | chr3.4:73976663-73976682 | MS.gene022351:intron | 30.0% |
! | AACAGGATTTTCATATCTTC+TGG | + | chr3.4:73977637-73977656 | None:intergenic | 30.0% |
! | ACTGCCATTTATTGTTAGTA+TGG | + | chr3.4:73978422-73978441 | None:intergenic | 30.0% |
! | ATATCAATTTGAAGCGACAA+GGG | + | chr3.4:73977543-73977562 | None:intergenic | 30.0% |
! | ATCGCATTTTCAAAAAATCG+TGG | + | chr3.4:73979497-73979516 | None:intergenic | 30.0% |
! | CAAATGTGTATGCTTTTGTA+TGG | + | chr3.4:73977968-73977987 | None:intergenic | 30.0% |
! | CATTTTGCTTATTATAGTCG+AGG | - | chr3.4:73975109-73975128 | MS.gene022351:intron | 30.0% |
! | CTACCATTTCTTGAATCTTT+TGG | + | chr3.4:73979235-73979254 | None:intergenic | 30.0% |
! | GTAGAGATACGATATTTTTC+AGG | + | chr3.4:73976976-73976995 | None:intergenic | 30.0% |
! | TCATTTTCGAAAAAGATTCC+GGG | + | chr3.4:73980336-73980355 | None:intergenic | 30.0% |
! | TCGCATTTTCAAAAAATCGT+GGG | + | chr3.4:73979496-73979515 | None:intergenic | 30.0% |
! | TGTTTTGCACTAGCATAATT+TGG | + | chr3.4:73980462-73980481 | None:intergenic | 30.0% |
!! | ATGATAACGTTCTTTTGTTC+TGG | - | chr3.4:73975985-73976004 | MS.gene022351:intron | 30.0% |
!! | TATTTTTAAAAAGGGCAACC+AGG | - | chr3.4:73978501-73978520 | MS.gene022351:intron | 30.0% |
!!! | AAAGTGTTTTGATTTCCTGT+GGG | - | chr3.4:73977899-73977918 | MS.gene022351:intron | 30.0% |
!!! | ACTAATTTTGAGGTACAGAT+AGG | - | chr3.4:73980298-73980317 | MS.gene022351:CDS | 30.0% |
!!! | ATTATTAGTCTGGTTTTGCA+AGG | - | chr3.4:73978097-73978116 | MS.gene022351:CDS | 30.0% |
!!! | GGAGTAATTTTGACTAAATG+TGG | - | chr3.4:73975754-73975773 | MS.gene022351:CDS | 30.0% |
!!! | GTGCATTCCCATTTTTTTTA+CGG | + | chr3.4:73979901-73979920 | None:intergenic | 30.0% |
!!! | TAAAGTGTTTTGATTTCCTG+TGG | - | chr3.4:73977898-73977917 | MS.gene022351:intron | 30.0% |
!!! | TTTTTAGGATGCTTGAAAAG+AGG | - | chr3.4:73975367-73975386 | MS.gene022351:intron | 30.0% |
AACACCATCTTCATTGTGAT+TGG | - | chr3.4:73978031-73978050 | MS.gene022351:intron | 35.0% | |
AAGAGGAGTTTGAGCTATAA+TGG | - | chr3.4:73975384-73975403 | MS.gene022351:intron | 35.0% | |
AAGCAAAGATATGGCAACTT+AGG | + | chr3.4:73976103-73976122 | None:intergenic | 35.0% | |
AAGCCCGGTATGAAATATTA+AGG | - | chr3.4:73980239-73980258 | MS.gene022351:intron | 35.0% | |
AATAGGATTATGTGGCCATT+TGG | + | chr3.4:73978835-73978854 | None:intergenic | 35.0% | |
AATGAGCATATATGGTCCTA+TGG | - | chr3.4:73976136-73976155 | MS.gene022351:intron | 35.0% | |
ACACAATAGATTACCCATAC+AGG | - | chr3.4:73978452-73978471 | MS.gene022351:intron | 35.0% | |
AGAACAGCAGATAACTTACA+AGG | + | chr3.4:73979762-73979781 | None:intergenic | 35.0% | |
AGAATTTGCGTTTGTGATAC+AGG | - | chr3.4:73975459-73975478 | MS.gene022351:intron | 35.0% | |
AGTACCAATCACAATGAAGA+TGG | + | chr3.4:73978038-73978057 | None:intergenic | 35.0% | |
ATATTAGGCTGCAAAAGCAA+TGG | + | chr3.4:73976777-73976796 | None:intergenic | 35.0% | |
ATCAAGCTTGATCAAAGGAT+TGG | - | chr3.4:73977561-73977580 | MS.gene022351:intron | 35.0% | |
ATGGCCACATAATCCTATTA+TGG | - | chr3.4:73978836-73978855 | MS.gene022351:CDS | 35.0% | |
ATTCATTGAAGCTAGAAGAC+TGG | + | chr3.4:73976630-73976649 | None:intergenic | 35.0% | |
CAATCAGTTTCACGTTATGT+GGG | - | chr3.4:73977491-73977510 | MS.gene022351:intron | 35.0% | |
CAGGATAAAGATGGCAAAAA+AGG | + | chr3.4:73977851-73977870 | None:intergenic | 35.0% | |
CCCATTCTACCTTTATATGA+TGG | - | chr3.4:73977746-73977765 | MS.gene022351:intron | 35.0% | |
CGTATAACTCAGACATTGTT+TGG | + | chr3.4:73975796-73975815 | None:intergenic | 35.0% | |
CTTCCTGCAAAAGAATTTGA+TGG | - | chr3.4:73976655-73976674 | MS.gene022351:intron | 35.0% | |
GAAATTAGTTGAAACTGCAG+AGG | - | chr3.4:73980536-73980555 | MS.gene022351:CDS | 35.0% | |
GAAGATAAGATTAGAGAGAG+TGG | + | chr3.4:73975048-73975067 | None:intergenic | 35.0% | |
GATAGATTATTACCCCTCAA+CGG | + | chr3.4:73975183-73975202 | None:intergenic | 35.0% | |
GCTGATATCAAAGCATATGT+TGG | - | chr3.4:73980202-73980221 | MS.gene022351:intron | 35.0% | |
GGATTTAGAGATTACTGAGT+TGG | + | chr3.4:73978348-73978367 | None:intergenic | 35.0% | |
GTAGTAGCTTCATGAAAATC+TGG | + | chr3.4:73980498-73980517 | None:intergenic | 35.0% | |
GTTTGAAGACACATTCTTAG+AGG | - | chr3.4:73977789-73977808 | MS.gene022351:intron | 35.0% | |
TGCACATTATCTGCAAGAAA+GGG | + | chr3.4:73975438-73975457 | None:intergenic | 35.0% | |
TGCAGCCTAATATATGAATC+TGG | - | chr3.4:73976784-73976803 | MS.gene022351:intron | 35.0% | |
TGCTTTACTCTTCACTGAAA+AGG | - | chr3.4:73976840-73976859 | MS.gene022351:intron | 35.0% | |
TGTTATTGTTTGTCTGATGC+TGG | + | chr3.4:73979970-73979989 | None:intergenic | 35.0% | |
TGTTCCTAACTAGTGGAAAA+AGG | + | chr3.4:73980046-73980065 | None:intergenic | 35.0% | |
TTGCACATTATCTGCAAGAA+AGG | + | chr3.4:73975439-73975458 | None:intergenic | 35.0% | |
TTGTTGTGTCAAATGCGTAA+CGG | - | chr3.4:73979176-73979195 | MS.gene022351:intron | 35.0% | |
TTTACCCGAATAGAATCAGA+AGG | + | chr3.4:73979430-73979449 | None:intergenic | 35.0% | |
TTTCGTTATACAAGAATCCC+TGG | + | chr3.4:73978579-73978598 | None:intergenic | 35.0% | |
TTTGACTAAATGTGGGAATC+TGG | - | chr3.4:73975762-73975781 | MS.gene022351:CDS | 35.0% | |
! | AATATTAAGGTCTTGTGTGC+AGG | - | chr3.4:73980252-73980271 | MS.gene022351:intron | 35.0% |
! | AATGGATAATCATGCTGACT+TGG | - | chr3.4:73980411-73980430 | MS.gene022351:intron | 35.0% |
! | ATGAATCTGGTCTAAAGCAA+AGG | - | chr3.4:73976797-73976816 | MS.gene022351:intron | 35.0% |
! | ATGCCATCAAATTCTTTTGC+AGG | + | chr3.4:73976661-73976680 | None:intergenic | 35.0% |
! | ATTTTCAAAAAATCGTGGGG+AGG | + | chr3.4:73979492-73979511 | None:intergenic | 35.0% |
! | CAAAAGAATTTGATGGCATG+TGG | - | chr3.4:73976662-73976681 | MS.gene022351:intron | 35.0% |
! | CGCATTTTCAAAAAATCGTG+GGG | + | chr3.4:73979495-73979514 | None:intergenic | 35.0% |
! | GATATCAATTTGAAGCGACA+AGG | + | chr3.4:73977544-73977563 | None:intergenic | 35.0% |
! | GATTGAAGCTTATCACCTTT+TGG | + | chr3.4:73976184-73976203 | None:intergenic | 35.0% |
! | GTAATGGGGGAAGTTTATTA+TGG | + | chr3.4:73976264-73976283 | None:intergenic | 35.0% |
! | TGCAGCATAATTCTTTTGCA+TGG | - | chr3.4:73977104-73977123 | MS.gene022351:intron | 35.0% |
! | TGCTTATGTGTCGTTGTAAT+GGG | + | chr3.4:73976279-73976298 | None:intergenic | 35.0% |
! | TTGATCCATTCCTTGTTTCA+TGG | - | chr3.4:73976866-73976885 | MS.gene022351:intron | 35.0% |
! | TTGGATTGACTCAAATAGCT+AGG | - | chr3.4:73977580-73977599 | MS.gene022351:intron | 35.0% |
! | TTTTCAAAAAATCGTGGGGA+GGG | + | chr3.4:73979491-73979510 | None:intergenic | 35.0% |
! | TTTTGCAAGGCATACTGTAT+CGG | - | chr3.4:73978110-73978129 | MS.gene022351:CDS | 35.0% |
!! | AGTCTTCTAGCTTCAATGAA+TGG | - | chr3.4:73976629-73976648 | MS.gene022351:intron | 35.0% |
!! | ATAATCATGCTGACTTGGTT+AGG | - | chr3.4:73980416-73980435 | MS.gene022351:intron | 35.0% |
!! | ATTTTAGGAAGACATTGGAG+TGG | + | chr3.4:73980069-73980088 | None:intergenic | 35.0% |
!! | CTATTAGCTAGCATTGGTTA+AGG | - | chr3.4:73977712-73977731 | MS.gene022351:intron | 35.0% |
!! | TACATATCTCTAGAACTCAC+CGG | + | chr3.4:73976894-73976913 | None:intergenic | 35.0% |
!!! | ATGGGCATAACTTTTGAGTT+TGG | - | chr3.4:73977669-73977688 | MS.gene022351:intron | 35.0% |
!!! | CTTTTTTGCCATCTTTATCC+TGG | - | chr3.4:73977849-73977868 | MS.gene022351:intron | 35.0% |
!!! | GTGGTTTTAGTTTTGTGTGA+GGG | - | chr3.4:73975259-73975278 | MS.gene022351:CDS | 35.0% |
!!! | TACTGTATCGGTTTTGACAT+TGG | - | chr3.4:73978122-73978141 | MS.gene022351:CDS | 35.0% |
!!! | TGGGCATAACTTTTGAGTTT+GGG | - | chr3.4:73977670-73977689 | MS.gene022351:intron | 35.0% |
!!! | TGGTTTTAGTTTTGTGTGAG+GGG | - | chr3.4:73975260-73975279 | MS.gene022351:CDS | 35.0% |
!!! | TGTGGTTTTAGTTTTGTGTG+AGG | - | chr3.4:73975258-73975277 | MS.gene022351:CDS | 35.0% |
AAAAGTTATGCCCATACCAC+TGG | + | chr3.4:73977664-73977683 | None:intergenic | 40.0% | |
AAACCCTATCCCACTAAGTT+TGG | - | chr3.4:73978268-73978287 | MS.gene022351:CDS | 40.0% | |
AAACTTAGTGGGATAGGGTT+TGG | + | chr3.4:73978269-73978288 | None:intergenic | 40.0% | |
AAAGTTATGCCCATACCACT+GGG | + | chr3.4:73977663-73977682 | None:intergenic | 40.0% | |
AACAATAACATGCCTGGATC+TGG | - | chr3.4:73979980-73979999 | MS.gene022351:intron | 40.0% | |
AAGCAATGGTAAATGGTGCA+AGG | + | chr3.4:73976763-73976782 | None:intergenic | 40.0% | |
ACCTGAAAGACATGTACTAC+AGG | + | chr3.4:73976020-73976039 | None:intergenic | 40.0% | |
AGGAGTTTGAGCTATAATGG+TGG | - | chr3.4:73975387-73975406 | MS.gene022351:intron | 40.0% | |
AGTAAATGGTTCTCCGAAAG+TGG | - | chr3.4:73977342-73977361 | MS.gene022351:intron | 40.0% | |
ATCTCTCATGAGACTGTGTA+TGG | + | chr3.4:73976236-73976255 | None:intergenic | 40.0% | |
CAAGAAATGGTAGAGGAAGA+AGG | - | chr3.4:73979242-73979261 | MS.gene022351:intron | 40.0% | |
CAATGCACCTCGAATTGAAT+CGG | + | chr3.4:73977187-73977206 | None:intergenic | 40.0% | |
CAGAATCTGTAATCAGCTCA+TGG | - | chr3.4:73976297-73976316 | MS.gene022351:intron | 40.0% | |
CAGACAAACAATAACATGCC+TGG | - | chr3.4:73979974-73979993 | MS.gene022351:intron | 40.0% | |
CATTATGGAGTGGCAAGATA+TGG | - | chr3.4:73975545-73975564 | MS.gene022351:intron | 40.0% | |
CCGAACCTTCTGATTCTATT+CGG | - | chr3.4:73979422-73979441 | MS.gene022351:intron | 40.0% | |
CCGAATAGAATCAGAAGGTT+CGG | + | chr3.4:73979425-73979444 | None:intergenic | 40.0% | |
CGAACCTTCTGATTCTATTC+GGG | - | chr3.4:73979423-73979442 | MS.gene022351:intron | 40.0% | |
GAAAATCCTGTTTATCCCAG+TGG | - | chr3.4:73977645-73977664 | MS.gene022351:intron | 40.0% | |
GCAATCAGTTTCACGTTATG+TGG | - | chr3.4:73977490-73977509 | MS.gene022351:intron | 40.0% | |
GCTGCAAAAGCAATGGTAAA+TGG | + | chr3.4:73976770-73976789 | None:intergenic | 40.0% | |
GGAATCTGAGTGGGAAAAAA+TGG | + | chr3.4:73977281-73977300 | None:intergenic | 40.0% | |
GGGATGATGTTGATGCATAA+TGG | + | chr3.4:73976476-73976495 | None:intergenic | 40.0% | |
GTAAATGGTTCTCCGAAAGT+GGG | - | chr3.4:73977343-73977362 | MS.gene022351:intron | 40.0% | |
GTAAGGTTAATTCCAGATCC+AGG | + | chr3.4:73979995-73980014 | None:intergenic | 40.0% | |
GTACATAGGTTCAGAGTTTC+AGG | + | chr3.4:73978219-73978238 | None:intergenic | 40.0% | |
GTATCATTTAGGTGGGCATT+TGG | - | chr3.4:73978973-73978992 | MS.gene022351:intron | 40.0% | |
TACCAAGTCCAGGATAAAGA+TGG | + | chr3.4:73977860-73977879 | None:intergenic | 40.0% | |
TAGAGGATTATTATGCTGGG+AGG | - | chr3.4:73977806-73977825 | MS.gene022351:intron | 40.0% | |
TCCAACATTACTGCTGCTAT+CGG | - | chr3.4:73979692-73979711 | MS.gene022351:intron | 40.0% | |
TCTGAGTGGGAAAAAATGGT+AGG | + | chr3.4:73977277-73977296 | None:intergenic | 40.0% | |
TGATGCTGGATGGTTTCTTA+TGG | - | chr3.4:73978191-73978210 | MS.gene022351:intron | 40.0% | |
TGCATTCACTTCAACAAGCT+GGG | + | chr3.4:73977310-73977329 | None:intergenic | 40.0% | |
TGTAATCAGCTCATGGTAGA+AGG | - | chr3.4:73976304-73976323 | MS.gene022351:intron | 40.0% | |
TGTCAATCCGATTCAATTCG+AGG | - | chr3.4:73977177-73977196 | MS.gene022351:intron | 40.0% | |
! | AATTTGATGGCATGTGGGAA+AGG | - | chr3.4:73976668-73976687 | MS.gene022351:intron | 40.0% |
! | AGAAACCATTCTAGAAGCTG+TGG | + | chr3.4:73976337-73976356 | None:intergenic | 40.0% |
! | AGATCTAGCTTCCCTTAATG+AGG | - | chr3.4:73979858-73979877 | MS.gene022351:intron | 40.0% |
! | ATGTACCGACCAAACTTAGT+GGG | + | chr3.4:73978280-73978299 | None:intergenic | 40.0% |
! | CATTCCTTGTTTCATGGAAC+CGG | - | chr3.4:73976872-73976891 | MS.gene022351:intron | 40.0% |
! | CTGCTTATGTGTCGTTGTAA+TGG | + | chr3.4:73976280-73976299 | None:intergenic | 40.0% |
! | CTTATGTGTCGTTGTAATGG+GGG | + | chr3.4:73976277-73976296 | None:intergenic | 40.0% |
! | GAAACCATTCTAGAAGCTGT+GGG | + | chr3.4:73976336-73976355 | None:intergenic | 40.0% |
! | GCTTATGTGTCGTTGTAATG+GGG | + | chr3.4:73976278-73976297 | None:intergenic | 40.0% |
! | TACTGAGTTGGACCGAAATA+TGG | + | chr3.4:73978336-73978355 | None:intergenic | 40.0% |
!! | GGAGGGTATTCAGGAAAAAT+AGG | - | chr3.4:73977920-73977939 | MS.gene022351:intron | 40.0% |
!! | TTTCACAACAAAAGGGCATC+TGG | + | chr3.4:73975683-73975702 | None:intergenic | 40.0% |
!!! | GGTATTTGTTTTGATCGGTG+AGG | - | chr3.4:73979271-73979290 | MS.gene022351:intron | 40.0% |
!!! | GGTTTTAGTTTTGTGTGAGG+GGG | - | chr3.4:73975261-73975280 | MS.gene022351:CDS | 40.0% |
!!! | TGTTTTGATTTCCTGTGGGA+GGG | - | chr3.4:73977903-73977922 | MS.gene022351:intron | 40.0% |
AACCATTGAACCAACCACCA+GGG | - | chr3.4:73978559-73978578 | MS.gene022351:intron | 45.0% | |
AAGCAGAAGATGATGCTGGA+TGG | - | chr3.4:73978181-73978200 | MS.gene022351:intron | 45.0% | |
ACAAAACTCCCACCATGACT+AGG | - | chr3.4:73978528-73978547 | MS.gene022351:intron | 45.0% | |
ACCGATAGCAGCAGTAATGT+TGG | + | chr3.4:73979696-73979715 | None:intergenic | 45.0% | |
AGATTATTACCCCTCAACGG+CGG | + | chr3.4:73975180-73975199 | None:intergenic | 45.0% | |
AGCAGCAGTAATGTTGGATG+TGG | + | chr3.4:73979690-73979709 | None:intergenic | 45.0% | |
AGCTAGGAAAACCCACTGTT+TGG | - | chr3.4:73977596-73977615 | MS.gene022351:intron | 45.0% | |
AGGGAGTTTATTCATGCAGG+GGG | + | chr3.4:73979468-73979487 | None:intergenic | 45.0% | |
AGTTTCACGTTATGTGGGCT+GGG | - | chr3.4:73977496-73977515 | MS.gene022351:intron | 45.0% | |
ATACAAGAATCCCTGGTGGT+TGG | + | chr3.4:73978572-73978591 | None:intergenic | 45.0% | |
ATCGTGAATTGAAGCTGTGC+TGG | + | chr3.4:73975150-73975169 | None:intergenic | 45.0% | |
CACTAAGTTTGGTCGGTACA+TGG | - | chr3.4:73978279-73978298 | MS.gene022351:CDS | 45.0% | |
CCTATCCCACTAAGTTTGGT+CGG | - | chr3.4:73978272-73978291 | MS.gene022351:CDS | 45.0% | |
CCTGTTTATCCCAGTGGTAT+GGG | - | chr3.4:73977651-73977670 | MS.gene022351:intron | 45.0% | |
CGACCAAACTTAGTGGGATA+GGG | + | chr3.4:73978274-73978293 | None:intergenic | 45.0% | |
CGGTTCCATGAAACAAGGAA+TGG | + | chr3.4:73976874-73976893 | None:intergenic | 45.0% | |
CGTTATACAAGAATCCCTGG+TGG | + | chr3.4:73978576-73978595 | None:intergenic | 45.0% | |
CTTTGACAGCTTAGCGAAGA+AGG | - | chr3.4:73976577-73976596 | MS.gene022351:intron | 45.0% | |
GAAGAGGATGCCACATGTTA+GGG | - | chr3.4:73978703-73978722 | MS.gene022351:intron | 45.0% | |
GAGGATAAAATTCTCGTCCC+TGG | - | chr3.4:73975017-73975036 | MS.gene022351:intron | 45.0% | |
GAGGGAGTTTATTCATGCAG+GGG | + | chr3.4:73979469-73979488 | None:intergenic | 45.0% | |
GATAGGTCTCAATCTTCTCC+CGG | - | chr3.4:73980315-73980334 | MS.gene022351:CDS | 45.0% | |
GCCTGTAGTACATGTCTTTC+AGG | - | chr3.4:73976016-73976035 | MS.gene022351:intron | 45.0% | |
GCTTAAGCAGAAGATGATGC+TGG | - | chr3.4:73978177-73978196 | MS.gene022351:intron | 45.0% | |
GGAATTGACCTAGTCATGGT+GGG | + | chr3.4:73978539-73978558 | None:intergenic | 45.0% | |
GGAGGGAGTTTATTCATGCA+GGG | + | chr3.4:73979470-73979489 | None:intergenic | 45.0% | |
GGTTGGAATTGACCTAGTCA+TGG | + | chr3.4:73978543-73978562 | None:intergenic | 45.0% | |
GTGCATTCACTTCAACAAGC+TGG | + | chr3.4:73977311-73977330 | None:intergenic | 45.0% | |
TAGTATGGTAGTAGAGGCAG+AGG | + | chr3.4:73978407-73978426 | None:intergenic | 45.0% | |
TCAGAGCTGATATCCTCACA+CGG | + | chr3.4:73976604-73976623 | None:intergenic | 45.0% | |
TCCTGTTTATCCCAGTGGTA+TGG | - | chr3.4:73977650-73977669 | MS.gene022351:intron | 45.0% | |
TGAAGAGGATGCCACATGTT+AGG | - | chr3.4:73978702-73978721 | MS.gene022351:intron | 45.0% | |
TGAATTGAAGCTGTGCTGGA+AGG | + | chr3.4:73975146-73975165 | None:intergenic | 45.0% | |
TGCAAGAAAGGGTTCGTCAA+GGG | + | chr3.4:73975427-73975446 | None:intergenic | 45.0% | |
TGCAGGAACTTATGCGTACA+GGG | - | chr3.4:73980269-73980288 | MS.gene022351:intron | 45.0% | |
TGCCATCTTTATCCTGGACT+TGG | - | chr3.4:73977855-73977874 | MS.gene022351:intron | 45.0% | |
TGGAATTGACCTAGTCATGG+TGG | + | chr3.4:73978540-73978559 | None:intergenic | 45.0% | |
TTCTCCTAGTCCAATGGAGA+CGG | - | chr3.4:73974908-73974927 | MS.gene022351:CDS | 45.0% | |
! | ACGAGAATTTTATCCTCCGG+TGG | + | chr3.4:73975014-73975033 | None:intergenic | 45.0% |
! | ATTTTATCCTCCGGTGGAAG+AGG | + | chr3.4:73975008-73975027 | None:intergenic | 45.0% |
! | CATGTACCGACCAAACTTAG+TGG | + | chr3.4:73978281-73978300 | None:intergenic | 45.0% |
! | GCTAGAAAAGCTGCTTTGTC+TGG | - | chr3.4:73979397-73979416 | MS.gene022351:intron | 45.0% |
! | GGGACGAGAATTTTATCCTC+CGG | + | chr3.4:73975017-73975036 | None:intergenic | 45.0% |
! | GTCTAAAGCAAAGGTTGCTG+CGG | - | chr3.4:73976806-73976825 | MS.gene022351:intron | 45.0% |
! | GTTTTGTGTGAGGGGGTAAT+TGG | - | chr3.4:73975268-73975287 | MS.gene022351:intron | 45.0% |
! | TGTGAGGATATCAGCTCTGA+TGG | - | chr3.4:73976604-73976623 | MS.gene022351:intron | 45.0% |
!! | TAGAGAGAGTGGAAGTACCA+GGG | + | chr3.4:73975037-73975056 | None:intergenic | 45.0% |
!! | TTAGAGAGAGTGGAAGTACC+AGG | + | chr3.4:73975038-73975057 | None:intergenic | 45.0% |
!!! | GTGTTTTGATTTCCTGTGGG+AGG | - | chr3.4:73977902-73977921 | MS.gene022351:intron | 45.0% |
!!! | TGTAGTCTGCCATTTTTCCC+TGG | - | chr3.4:73978877-73978896 | MS.gene022351:intron | 45.0% |
AAAGACGTCTTTCCAGTCCC+AGG | + | chr3.4:73977134-73977153 | None:intergenic | 50.0% | |
AAAGGGTTCGTCAAGGGGAA+CGG | + | chr3.4:73975421-73975440 | None:intergenic | 50.0% | |
AACCCTACGACCGACCAAAA+CGG | - | chr3.4:73974936-73974955 | MS.gene022351:CDS | 50.0% | |
AAGACGTCTTTCCAGTCCCA+GGG | + | chr3.4:73977133-73977152 | None:intergenic | 50.0% | |
AGGCTTTCGACTTCATCTGC+AGG | + | chr3.4:73979370-73979389 | None:intergenic | 50.0% | |
AGGTGAACGTTGGGAAGCTA+CGG | + | chr3.4:73974964-73974983 | None:intergenic | 50.0% | |
ATCAACCGTGCCCTAACATG+TGG | + | chr3.4:73978716-73978735 | None:intergenic | 50.0% | |
ATGGTGGTAGAGGTGAACGT+TGG | + | chr3.4:73974974-73974993 | None:intergenic | 50.0% | |
CAAAAAATCGTGGGGAGGGA+GGG | + | chr3.4:73979487-73979506 | None:intergenic | 50.0% | |
CAACCATTGAACCAACCACC+AGG | - | chr3.4:73978558-73978577 | MS.gene022351:intron | 50.0% | |
CAGTTTCACGTTATGTGGGC+TGG | - | chr3.4:73977495-73977514 | MS.gene022351:intron | 50.0% | |
CCCATACCACTGGGATAAAC+AGG | + | chr3.4:73977654-73977673 | None:intergenic | 50.0% | |
CCGACCAAACTTAGTGGGAT+AGG | + | chr3.4:73978275-73978294 | None:intergenic | 50.0% | |
CGGACAATACTACCAAGTCC+AGG | + | chr3.4:73977870-73977889 | None:intergenic | 50.0% | |
CTGCAAGAAAGGGTTCGTCA+AGG | + | chr3.4:73975428-73975447 | None:intergenic | 50.0% | |
GAGCACTTCTCCTAGTCCAA+TGG | - | chr3.4:73974902-73974921 | MS.gene022351:CDS | 50.0% | |
GCAAGAAAGGGTTCGTCAAG+GGG | + | chr3.4:73975426-73975445 | None:intergenic | 50.0% | |
GCATACCAGCTTCCCACTTT+CGG | + | chr3.4:73977358-73977377 | None:intergenic | 50.0% | |
GGAGTGGTGTTCCTAACTAG+TGG | + | chr3.4:73980053-73980072 | None:intergenic | 50.0% | |
GGGAGGGAGTTTATTCATGC+AGG | + | chr3.4:73979471-73979490 | None:intergenic | 50.0% | |
GGTAGAGGAAGAAGGCAATC+TGG | - | chr3.4:73979250-73979269 | MS.gene022351:intron | 50.0% | |
GTGCAGGAACTTATGCGTAC+AGG | - | chr3.4:73980268-73980287 | MS.gene022351:intron | 50.0% | |
TCAAAAAATCGTGGGGAGGG+AGG | + | chr3.4:73979488-73979507 | None:intergenic | 50.0% | |
TCATACCGGGCTTGAAGAGT+TGG | + | chr3.4:73980232-73980251 | None:intergenic | 50.0% | |
TGGTGGTAGAGGTGAACGTT+GGG | + | chr3.4:73974973-73974992 | None:intergenic | 50.0% | |
TTTCCCACTCAGATTCCCAC+AGG | - | chr3.4:73977284-73977303 | MS.gene022351:intron | 50.0% | |
TTTCCTGAATACCCTCCCAC+AGG | + | chr3.4:73977917-73977936 | None:intergenic | 50.0% | |
! | ATCCCTGGTGGTTGGTTCAA+TGG | + | chr3.4:73978564-73978583 | None:intergenic | 50.0% |
! | ATTCTTTTGCATGGACCCCC+TGG | - | chr3.4:73977113-73977132 | MS.gene022351:intron | 50.0% |
! | CTATCGGGTTCTGTGTTGCT+TGG | - | chr3.4:73975320-73975339 | MS.gene022351:intron | 50.0% |
! | CTGACCCACAGCTTCTAGAA+TGG | - | chr3.4:73976329-73976348 | MS.gene022351:intron | 50.0% |
! | CTGGTGGTTGGTTCAATGGT+TGG | + | chr3.4:73978560-73978579 | None:intergenic | 50.0% |
! | GCTTCAATCGGTTCATCTGC+TGG | - | chr3.4:73976195-73976214 | MS.gene022351:CDS | 50.0% |
! | GTTTCACGTTATGTGGGCTG+GGG | - | chr3.4:73977497-73977516 | MS.gene022351:intron | 50.0% |
! | TGAAACTGCAGAGGCATGTG+AGG | - | chr3.4:73980545-73980564 | MS.gene022351:CDS | 50.0% |
! | TTCTTTTGCATGGACCCCCT+GGG | - | chr3.4:73977114-73977133 | MS.gene022351:intron | 50.0% |
!! | CAGCTTTTCTAGCAGCAGCA+AGG | + | chr3.4:73979390-73979409 | None:intergenic | 50.0% |
!! | CTCACCGGTTCCATGAAACA+AGG | + | chr3.4:73976879-73976898 | None:intergenic | 50.0% |
!! | GGTGGGAGTTTTGTAGAACC+TGG | + | chr3.4:73978522-73978541 | None:intergenic | 50.0% |
!! | TTTCACGTTATGTGGGCTGG+GGG | - | chr3.4:73977498-73977517 | MS.gene022351:intron | 50.0% |
!! | TTTCCTGTGGGAGGGTATTC+AGG | - | chr3.4:73977911-73977930 | MS.gene022351:intron | 50.0% |
AAGGGTTCGTCAAGGGGAAC+GGG | + | chr3.4:73975420-73975439 | None:intergenic | 55.0% | |
ACTTCAACAAGCTGGGCCTG+TGG | + | chr3.4:73977303-73977322 | None:intergenic | 55.0% | |
AGACGTCTTTCCAGTCCCAG+GGG | + | chr3.4:73977132-73977151 | None:intergenic | 55.0% | |
ATTACCCCTCAACGGCGGAA+CGG | + | chr3.4:73975175-73975194 | None:intergenic | 55.0% | |
CTTCAACAAGCTGGGCCTGT+GGG | + | chr3.4:73977302-73977321 | None:intergenic | 55.0% | |
GGATGCCACATGTTAGGGCA+CGG | - | chr3.4:73978708-73978727 | MS.gene022351:intron | 55.0% | |
GTTCTCCGAAAGTGGGAAGC+TGG | - | chr3.4:73977350-73977369 | MS.gene022351:intron | 55.0% | |
TACCGGGCTTGAAGAGTTGG+TGG | + | chr3.4:73980229-73980248 | None:intergenic | 55.0% | |
TAGCGAAGAAGGACCGTGTG+AGG | - | chr3.4:73976588-73976607 | MS.gene022351:intron | 55.0% | |
TCGTCAAGGGGAACGGGAAT+CGG | + | chr3.4:73975414-73975433 | None:intergenic | 55.0% | |
TGCTCCGTCTCCATTGGACT+AGG | + | chr3.4:73974915-73974934 | None:intergenic | 55.0% | |
TTATCCTCCGGTGGAAGAGG+AGG | + | chr3.4:73975005-73975024 | None:intergenic | 55.0% | |
! | ACCGGGCTTGAAGAGTTGGT+GGG | + | chr3.4:73980228-73980247 | None:intergenic | 55.0% |
! | GGGTTTTGCTCCGTCTCCAT+TGG | + | chr3.4:73974921-73974940 | None:intergenic | 55.0% |
!! | CAAAAGGGCATCTGGACGTG+CGG | + | chr3.4:73975675-73975694 | None:intergenic | 55.0% |
ATGTCCGTTCCGCCGTTGAG+GGG | - | chr3.4:73975168-73975187 | MS.gene022351:CDS | 60.0% | |
GACGTCTTTCCAGTCCCAGG+GGG | + | chr3.4:73977131-73977150 | None:intergenic | 60.0% | |
GATGTCCGTTCCGCCGTTGA+GGG | - | chr3.4:73975167-73975186 | MS.gene022351:CDS | 60.0% | |
GCCCACCAACTCTTCAAGCC+CGG | - | chr3.4:73980224-73980243 | MS.gene022351:intron | 60.0% | |
GGGCCTGTGGGAATCTGAGT+GGG | + | chr3.4:73977290-73977309 | None:intergenic | 60.0% | |
TGGGCCTGTGGGAATCTGAG+TGG | + | chr3.4:73977291-73977310 | None:intergenic | 60.0% | |
! | TTCATGCAGGGGGCGCAGAA+AGG | + | chr3.4:73979458-73979477 | None:intergenic | 60.0% |
!! | AGCTACGGCGCCGTTTTGGT+CGG | + | chr3.4:73974949-73974968 | None:intergenic | 60.0% |
!! | CGCCGTTTTGGTCGGTCGTA+GGG | + | chr3.4:73974941-73974960 | None:intergenic | 60.0% |
AGAGGAGGAGGGGGAGATGG+TGG | + | chr3.4:73974990-73975009 | None:intergenic | 65.0% | |
CCTCCGGTGGAAGAGGAGGA+GGG | + | chr3.4:73975001-73975020 | None:intergenic | 65.0% | |
CGATGTCCGTTCCGCCGTTG+AGG | - | chr3.4:73975166-73975185 | MS.gene022351:CDS | 65.0% | |
CTCCGGTGGAAGAGGAGGAG+GGG | + | chr3.4:73975000-73975019 | None:intergenic | 65.0% | |
GGAAGAGGAGGAGGGGGAGA+TGG | + | chr3.4:73974993-73975012 | None:intergenic | 65.0% | |
TCCCCCTCCTCCTCTTCCAC+CGG | - | chr3.4:73974995-73975014 | MS.gene022351:CDS | 65.0% | |
TCCGGTGGAAGAGGAGGAGG+GGG | + | chr3.4:73974999-73975018 | None:intergenic | 65.0% | |
TCCTCCGGTGGAAGAGGAGG+AGG | + | chr3.4:73975002-73975021 | None:intergenic | 65.0% | |
TTGCATGGACCCCCTGGGAC+TGG | - | chr3.4:73977119-73977138 | MS.gene022351:intron | 65.0% | |
! | ATGCAGGGGGCGCAGAAAGG+AGG | + | chr3.4:73979455-73979474 | None:intergenic | 65.0% |
! | GGAGGGGGAGATGGTGGTAG+AGG | + | chr3.4:73974984-73975003 | None:intergenic | 65.0% |
! | GGGAAGCTACGGCGCCGTTT+TGG | + | chr3.4:73974953-73974972 | None:intergenic | 65.0% |
!! | GCGCCGTTTTGGTCGGTCGT+AGG | + | chr3.4:73974942-73974961 | None:intergenic | 65.0% |
CCCTCCTCCTCTTCCACCGG+AGG | - | chr3.4:73974998-73975017 | MS.gene022351:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 73974900 | 73980566 | 73974900 | ID=MS.gene022351 |
chr3.4 | mRNA | 73974900 | 73980566 | 73974900 | ID=MS.gene022351.t1;Parent=MS.gene022351 |
chr3.4 | exon | 73980428 | 73980566 | 73980428 | ID=MS.gene022351.t1.exon1;Parent=MS.gene022351.t1 |
chr3.4 | CDS | 73980428 | 73980566 | 73980428 | ID=cds.MS.gene022351.t1;Parent=MS.gene022351.t1 |
chr3.4 | exon | 73980277 | 73980340 | 73980277 | ID=MS.gene022351.t1.exon2;Parent=MS.gene022351.t1 |
chr3.4 | CDS | 73980277 | 73980340 | 73980277 | ID=cds.MS.gene022351.t1;Parent=MS.gene022351.t1 |
chr3.4 | exon | 73979986 | 73980092 | 73979986 | ID=MS.gene022351.t1.exon3;Parent=MS.gene022351.t1 |
chr3.4 | CDS | 73979986 | 73980092 | 73979986 | ID=cds.MS.gene022351.t1;Parent=MS.gene022351.t1 |
chr3.4 | exon | 73979429 | 73979496 | 73979429 | ID=MS.gene022351.t1.exon4;Parent=MS.gene022351.t1 |
chr3.4 | CDS | 73979429 | 73979496 | 73979429 | ID=cds.MS.gene022351.t1;Parent=MS.gene022351.t1 |
chr3.4 | exon | 73978777 | 73978880 | 73978777 | ID=MS.gene022351.t1.exon5;Parent=MS.gene022351.t1 |
chr3.4 | CDS | 73978777 | 73978880 | 73978777 | ID=cds.MS.gene022351.t1;Parent=MS.gene022351.t1 |
chr3.4 | exon | 73978573 | 73978677 | 73978573 | ID=MS.gene022351.t1.exon6;Parent=MS.gene022351.t1 |
chr3.4 | CDS | 73978573 | 73978677 | 73978573 | ID=cds.MS.gene022351.t1;Parent=MS.gene022351.t1 |
chr3.4 | exon | 73978268 | 73978357 | 73978268 | ID=MS.gene022351.t1.exon7;Parent=MS.gene022351.t1 |
chr3.4 | CDS | 73978268 | 73978357 | 73978268 | ID=cds.MS.gene022351.t1;Parent=MS.gene022351.t1 |
chr3.4 | exon | 73978095 | 73978170 | 73978095 | ID=MS.gene022351.t1.exon8;Parent=MS.gene022351.t1 |
chr3.4 | CDS | 73978095 | 73978170 | 73978095 | ID=cds.MS.gene022351.t1;Parent=MS.gene022351.t1 |
chr3.4 | exon | 73976179 | 73976248 | 73976179 | ID=MS.gene022351.t1.exon9;Parent=MS.gene022351.t1 |
chr3.4 | CDS | 73976179 | 73976248 | 73976179 | ID=cds.MS.gene022351.t1;Parent=MS.gene022351.t1 |
chr3.4 | exon | 73976022 | 73976092 | 73976022 | ID=MS.gene022351.t1.exon10;Parent=MS.gene022351.t1 |
chr3.4 | CDS | 73976022 | 73976092 | 73976022 | ID=cds.MS.gene022351.t1;Parent=MS.gene022351.t1 |
chr3.4 | exon | 73975753 | 73975843 | 73975753 | ID=MS.gene022351.t1.exon11;Parent=MS.gene022351.t1 |
chr3.4 | CDS | 73975753 | 73975843 | 73975753 | ID=cds.MS.gene022351.t1;Parent=MS.gene022351.t1 |
chr3.4 | exon | 73975157 | 73975284 | 73975157 | ID=MS.gene022351.t1.exon12;Parent=MS.gene022351.t1 |
chr3.4 | CDS | 73975157 | 73975284 | 73975157 | ID=cds.MS.gene022351.t1;Parent=MS.gene022351.t1 |
chr3.4 | exon | 73974900 | 73975028 | 73974900 | ID=MS.gene022351.t1.exon13;Parent=MS.gene022351.t1 |
chr3.4 | CDS | 73974900 | 73975028 | 73974900 | ID=cds.MS.gene022351.t1;Parent=MS.gene022351.t1 |
Gene Sequence |
Protein sequence |