Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022565.t1 | XP_013443748.1 | 97 | 232 | 7 | 0 | 1 | 232 | 1 | 232 | 1.60E-114 | 422.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022565.t1 | Q41932 | 68.9 | 235 | 65 | 4 | 1 | 232 | 1 | 230 | 2.7e-78 | 293.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022565.t1 | I3SSE5 | 97.0 | 232 | 7 | 0 | 1 | 232 | 1 | 232 | 1.2e-114 | 422.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene022565 | MS.gene061340 | PPI |
MS.gene022565 | MS.gene91801 | PPI |
MS.gene022565 | MS.gene055362 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022565.t1 | MTR_8g005175 | 97.845 | 232 | 5 | 0 | 1 | 232 | 1 | 232 | 3.09e-167 | 460 |
MS.gene022565.t1 | MTR_8g005175 | 87.879 | 231 | 25 | 1 | 1 | 228 | 1 | 231 | 2.20e-143 | 401 |
MS.gene022565.t1 | MTR_3g064070 | 29.524 | 105 | 74 | 0 | 127 | 231 | 73 | 177 | 9.57e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022565.t1 | AT4G05180 | 68.936 | 235 | 65 | 4 | 1 | 232 | 1 | 230 | 1.01e-109 | 315 |
MS.gene022565.t1 | AT4G05180 | 68.936 | 235 | 65 | 4 | 1 | 232 | 1 | 230 | 1.01e-109 | 315 |
MS.gene022565.t1 | AT4G21280 | 69.298 | 228 | 65 | 3 | 5 | 232 | 1 | 223 | 2.03e-104 | 301 |
MS.gene022565.t1 | AT4G21280 | 68.996 | 229 | 65 | 4 | 5 | 232 | 1 | 224 | 1.12e-102 | 297 |
Find 53 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGATATGGCCAAGCTTTC+TGG | 0.130603 | 8.4:-80370857 | None:intergenic |
AATGATGTTCTTAGCAAAAT+TGG | 0.209646 | 8.4:+80371556 | MS.gene022565:CDS |
GGTGGCCCTCCTCCACCTTC+TGG | 0.276244 | 8.4:+80369925 | MS.gene022565:CDS |
GATATCCTGGAAGAGCTTTC+CGG | 0.325246 | 8.4:-80370979 | None:intergenic |
AGGAGGGCCACCAACTTTAA+TGG | 0.339587 | 8.4:-80369914 | None:intergenic |
CGTAGATCATTCTGAAGATA+TGG | 0.365781 | 8.4:-80370870 | None:intergenic |
GTGCTTGGTCTTGTTGCAAC+TGG | 0.375439 | 8.4:+80369844 | MS.gene022565:CDS |
CTTTGGCTTTGCAGAGATGA+TGG | 0.383227 | 8.4:-80370928 | None:intergenic |
TGGTCTTGTTGCAACTGGTT+TGG | 0.399632 | 8.4:+80369849 | MS.gene022565:CDS |
ACTCACCGGAAAGCTCTTCC+AGG | 0.411588 | 8.4:+80370974 | MS.gene022565:CDS |
TTTCTTTCAATGGTAGGTTA+AGG | 0.416462 | 8.4:-80370743 | None:intergenic |
GGCTCAAGCTATGGCATCAA+TGG | 0.422031 | 8.4:+80369654 | MS.gene022565:CDS |
GGAGGGCCACCAACTTTAAT+GGG | 0.432194 | 8.4:-80369913 | None:intergenic |
TGTTAAAGCACAACAACAAC+AGG | 0.432911 | 8.4:+80369804 | MS.gene022565:CDS |
TTAACCTACCATTGAAAGAA+AGG | 0.436888 | 8.4:+80370745 | MS.gene022565:CDS |
TTGCAGAGATGATGGTGTTA+AGG | 0.438783 | 8.4:-80370920 | None:intergenic |
GCTGCCTCAGTTGGTGTCAA+TGG | 0.441161 | 8.4:-80370780 | None:intergenic |
AGGTAGAACCTTTCTTTCAA+TGG | 0.442299 | 8.4:-80370753 | None:intergenic |
GTCTCAGAGCTGGCTATCTT+CGG | 0.456619 | 8.4:+80370892 | MS.gene022565:CDS |
GCTCTTGCAGCTGCCTCAGT+TGG | 0.457785 | 8.4:-80370789 | None:intergenic |
GCCATTCCCATTAAAGTTGG+TGG | 0.462320 | 8.4:+80369907 | MS.gene022565:CDS |
TACTTACATTGTCGATATCC+TGG | 0.468976 | 8.4:-80370992 | None:intergenic |
AGGCCACCAGAAGGTGGAGG+AGG | 0.471417 | 8.4:-80369931 | None:intergenic |
GGCCCTCCTCCACCTTCTGG+TGG | 0.478722 | 8.4:+80369928 | MS.gene022565:CDS |
CAAGCTATGGCATCAATGGC+TGG | 0.483768 | 8.4:+80369658 | MS.gene022565:CDS |
CTCTACAATGGCTCAAGCTA+TGG | 0.486675 | 8.4:+80369645 | None:intergenic |
AGAACCTTTCTTTCAATGGT+AGG | 0.507585 | 8.4:-80370749 | None:intergenic |
TGAGGCAGCTGCAAGAGCTA+AGG | 0.508030 | 8.4:+80370794 | MS.gene022565:CDS |
GCCACCAACTTTAATGGGAA+TGG | 0.510062 | 8.4:-80369908 | None:intergenic |
TTCAACTGAGTGGATCAAAC+AGG | 0.511674 | 8.4:+80369725 | MS.gene022565:CDS |
TGTTCAAGCTGTTCTTGCTG+AGG | 0.514649 | 8.4:+80369885 | MS.gene022565:CDS |
AAGAACAGCTTGAACAAAAG+AGG | 0.520210 | 8.4:-80369878 | None:intergenic |
TTCATCATCTCAAGCTGTGA+TGG | 0.526246 | 8.4:+80369693 | MS.gene022565:CDS |
TCAATGGCTGGTTGCTTACG+TGG | 0.530127 | 8.4:+80369670 | MS.gene022565:CDS |
GAGGCCATTCCCATTAAAGT+TGG | 0.533037 | 8.4:+80369904 | MS.gene022565:CDS |
AGTAGCAGAAGAGCAGTGCT+TGG | 0.543090 | 8.4:+80369829 | MS.gene022565:CDS |
AATGATCTACGTCTCAGAGC+TGG | 0.548338 | 8.4:+80370882 | MS.gene022565:CDS |
TAGTACTTCTCTGCATCTGA+GGG | 0.548759 | 8.4:-80371511 | None:intergenic |
AGTTCATAGACCAGAAAGCT+TGG | 0.554807 | 8.4:+80370847 | MS.gene022565:CDS |
GGCCACCAGAAGGTGGAGGA+GGG | 0.557926 | 8.4:-80369930 | None:intergenic |
CAGTTGGTGTCAATGGTTGA+AGG | 0.570020 | 8.4:-80370773 | None:intergenic |
ATAGTACTTCTCTGCATCTG+AGG | 0.575292 | 8.4:-80371512 | None:intergenic |
TCATCTCAAGCTGTGATGGA+AGG | 0.586825 | 8.4:+80369697 | MS.gene022565:CDS |
CGAAGGCCACCAGAAGGTGG+AGG | 0.590512 | 8.4:-80369934 | None:intergenic |
AAATTTCTCAAGGAACTCAC+CGG | 0.604883 | 8.4:+80370960 | MS.gene022565:CDS |
TTACGAAGGCCACCAGAAGG+TGG | 0.625990 | 8.4:-80369937 | None:intergenic |
AACAGGTTGAACATGTTGCA+TGG | 0.626500 | 8.4:+80369742 | MS.gene022565:CDS |
CATCATCTCTGCAAAGCCAA+AGG | 0.627597 | 8.4:+80370929 | MS.gene022565:CDS |
GCATGGTAGCAACAGTAACA+AGG | 0.637680 | 8.4:+80369759 | MS.gene022565:CDS |
TACTTACGAAGGCCACCAGA+AGG | 0.643651 | 8.4:-80369940 | None:intergenic |
GAAGGAAGTCTTCAACTGAG+TGG | 0.680495 | 8.4:+80369715 | MS.gene022565:CDS |
AGTACTTCTCTGCATCTGAG+GGG | 0.682536 | 8.4:-80371510 | None:intergenic |
TCAACCATTGACACCAACTG+AGG | 0.698559 | 8.4:+80370776 | MS.gene022565:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTACATTTATTAAGAATGA+TGG | + | chr8.4:80370096-80370115 | MS.gene022565:intron | 15.0% |
!!! | TATACAATATTACATTTTCA+AGG | + | chr8.4:80371013-80371032 | MS.gene022565:intron | 15.0% |
!! | AAAAAAATGACTAAATTTGC+TGG | - | chr8.4:80370245-80370264 | None:intergenic | 20.0% |
!! | AAATACTGAACTTGATTAAA+TGG | + | chr8.4:80370459-80370478 | MS.gene022565:intron | 20.0% |
!! | TAAATATCGATCTTAAAATC+AGG | - | chr8.4:80371179-80371198 | None:intergenic | 20.0% |
!! | TTAAATATGAATACTTACGA+AGG | - | chr8.4:80369954-80369973 | None:intergenic | 20.0% |
!! | TTACAAGAAAAGAAAGAAAT+AGG | - | chr8.4:80370535-80370554 | None:intergenic | 20.0% |
!!! | ATGATATTGCTATTTGAATT+CGG | + | chr8.4:80370324-80370343 | MS.gene022565:intron | 20.0% |
!!! | ATGTTGAATTAACTGATTTA+TGG | + | chr8.4:80370679-80370698 | MS.gene022565:intron | 20.0% |
!!! | ATTAACTGATTTATGGAATT+TGG | + | chr8.4:80370686-80370705 | MS.gene022565:intron | 20.0% |
!!! | TATTTTACCTCTAATTGTAA+TGG | + | chr8.4:80370133-80370152 | MS.gene022565:intron | 20.0% |
!!! | TTCAACATTCTAGAAATTAT+TGG | - | chr8.4:80370667-80370686 | None:intergenic | 20.0% |
! | AATGATGTTCTTAGCAAAAT+TGG | + | chr8.4:80371556-80371575 | MS.gene022565:CDS | 25.0% |
! | ATGTTCTTAATAGGAGAATA+CGG | + | chr8.4:80370488-80370507 | MS.gene022565:intron | 25.0% |
! | CTAAATTGATAAAGAGCTAT+CGG | - | chr8.4:80371416-80371435 | None:intergenic | 25.0% |
! | GATAGCTCTTTATCAATTTA+GGG | + | chr8.4:80371415-80371434 | MS.gene022565:intron | 25.0% |
! | GTATTTATATTTGAGTCAAG+AGG | - | chr8.4:80370071-80370090 | None:intergenic | 25.0% |
! | TAGAATAGTAACATTAAGTG+TGG | + | chr8.4:80370187-80370206 | MS.gene022565:intron | 25.0% |
! | TATTCTCCTATTAAGAACAT+CGG | - | chr8.4:80370488-80370507 | None:intergenic | 25.0% |
!! | ACATTCTAGAAATTATTGGA+TGG | - | chr8.4:80370663-80370682 | None:intergenic | 25.0% |
!!! | TAAATTTGTTGTTGTAGTAC+TGG | + | chr8.4:80371038-80371057 | MS.gene022565:intron | 25.0% |
AATGAAAGTCTGCAATTTCT+TGG | - | chr8.4:80370423-80370442 | None:intergenic | 30.0% | |
AGTTAATGTTGTCTCAATTG+CGG | + | chr8.4:80371346-80371365 | MS.gene022565:intron | 30.0% | |
CGATAGCTCTTTATCAATTT+AGG | + | chr8.4:80371414-80371433 | MS.gene022565:intron | 30.0% | |
GAGATAACCATTACAATTAG+AGG | - | chr8.4:80370143-80370162 | None:intergenic | 30.0% | |
TATTCTAGCATTCAGAACAT+CGG | + | chr8.4:80370371-80370390 | MS.gene022565:intron | 30.0% | |
TGTTGTCAATTCAAGTAACA+TGG | + | chr8.4:80370022-80370041 | MS.gene022565:intron | 30.0% | |
TTAACCTACCATTGAAAGAA+AGG | + | chr8.4:80370745-80370764 | MS.gene022565:CDS | 30.0% | |
TTTCTTTCAATGGTAGGTTA+AGG | - | chr8.4:80370746-80370765 | None:intergenic | 30.0% | |
! | TCTTTATCAATTTAGGGTTG+TGG | + | chr8.4:80371421-80371440 | MS.gene022565:intron | 30.0% |
!!! | AGAAATTTTTTCTGGTCCTT+TGG | - | chr8.4:80370948-80370967 | None:intergenic | 30.0% |
!!! | GTTCCTTGAGAAATTTTTTC+TGG | - | chr8.4:80370956-80370975 | None:intergenic | 30.0% |
AAATAGGTTTCCATGCAGTA+GGG | - | chr8.4:80370519-80370538 | None:intergenic | 35.0% | |
AAATTTCTCAAGGAACTCAC+CGG | + | chr8.4:80370960-80370979 | MS.gene022565:CDS | 35.0% | |
AAGAACAGCTTGAACAAAAG+AGG | - | chr8.4:80369881-80369900 | None:intergenic | 35.0% | |
ACTGCAGATAATCACGTATT+TGG | + | chr8.4:80371080-80371099 | MS.gene022565:intron | 35.0% | |
AGAACCTTTCTTTCAATGGT+AGG | - | chr8.4:80370752-80370771 | None:intergenic | 35.0% | |
AGGTAGAACCTTTCTTTCAA+TGG | - | chr8.4:80370756-80370775 | None:intergenic | 35.0% | |
ATCATTAGATCAAGACCGAA+CGG | + | chr8.4:80370396-80370415 | MS.gene022565:intron | 35.0% | |
CAAGTAACATGGTAAAACCT+TGG | + | chr8.4:80370033-80370052 | MS.gene022565:intron | 35.0% | |
CAATCCAAATTCGAGAATCA+CGG | + | chr8.4:80371315-80371334 | MS.gene022565:intron | 35.0% | |
CAGCAAATTGGTTGTAAAGT+TGG | - | chr8.4:80371262-80371281 | None:intergenic | 35.0% | |
CATTCATGTAGTCAGCAAAT+TGG | - | chr8.4:80371274-80371293 | None:intergenic | 35.0% | |
GGACCAGAAAAAATTTCTCA+AGG | + | chr8.4:80370950-80370969 | MS.gene022565:CDS | 35.0% | |
GTTAACGACATAAAAACCCA+CGG | + | chr8.4:80371379-80371398 | MS.gene022565:intron | 35.0% | |
TACTTACATTGTCGATATCC+TGG | - | chr8.4:80370995-80371014 | None:intergenic | 35.0% | |
TCACGTATTTGGATTGCTTA+TGG | + | chr8.4:80371091-80371110 | MS.gene022565:intron | 35.0% | |
TGTTAAAGCACAACAACAAC+AGG | + | chr8.4:80369804-80369823 | MS.gene022565:CDS | 35.0% | |
! | ATTTAGGGTTGTGGAAAGAT+TGG | + | chr8.4:80371430-80371449 | MS.gene022565:intron | 35.0% |
! | CGTAGATCATTCTGAAGATA+TGG | - | chr8.4:80370873-80370892 | None:intergenic | 35.0% |
AATTCGGAGTACATGCAGTT+AGG | + | chr8.4:80370340-80370359 | MS.gene022565:intron | 40.0% | |
AGAGGCAGTAACATATACCA+AGG | - | chr8.4:80370053-80370072 | None:intergenic | 40.0% | |
AGTTCATAGACCAGAAAGCT+TGG | + | chr8.4:80370847-80370866 | MS.gene022565:CDS | 40.0% | |
ATAGTACTTCTCTGCATCTG+AGG | - | chr8.4:80371515-80371534 | None:intergenic | 40.0% | |
ATCTGCAGTCTCAAGAACTT+CGG | - | chr8.4:80371069-80371088 | None:intergenic | 40.0% | |
GAAATAGGTTTCCATGCAGT+AGG | - | chr8.4:80370520-80370539 | None:intergenic | 40.0% | |
GATTTATGGAATTTGGCAGC+TGG | + | chr8.4:80370693-80370712 | MS.gene022565:intron | 40.0% | |
TAGTACTTCTCTGCATCTGA+GGG | - | chr8.4:80371514-80371533 | None:intergenic | 40.0% | |
TGGCAACCGATGTTCTTAAT+AGG | + | chr8.4:80370479-80370498 | MS.gene022565:intron | 40.0% | |
TTCAACTGAGTGGATCAAAC+AGG | + | chr8.4:80369725-80369744 | MS.gene022565:CDS | 40.0% | |
TTCATCATCTCAAGCTGTGA+TGG | + | chr8.4:80369693-80369712 | MS.gene022565:CDS | 40.0% | |
TTGACCGTGATTCTCGAATT+TGG | - | chr8.4:80371322-80371341 | None:intergenic | 40.0% | |
! | AACAGGTTGAACATGTTGCA+TGG | + | chr8.4:80369742-80369761 | MS.gene022565:CDS | 40.0% |
! | TTGCAGAGATGATGGTGTTA+AGG | - | chr8.4:80370923-80370942 | None:intergenic | 40.0% |
! | TTTTCTTCTTTGTTCCCAGC+TGG | + | chr8.4:80371465-80371484 | MS.gene022565:intron | 40.0% |
! | TTTTGCTGCATAATCCAGCT+GGG | - | chr8.4:80371482-80371501 | None:intergenic | 40.0% |
AATGATCTACGTCTCAGAGC+TGG | + | chr8.4:80370882-80370901 | MS.gene022565:CDS | 45.0% | |
AGTACTTCTCTGCATCTGAG+GGG | - | chr8.4:80371513-80371532 | None:intergenic | 45.0% | |
CATCATCTCTGCAAAGCCAA+AGG | + | chr8.4:80370929-80370948 | MS.gene022565:CDS | 45.0% | |
CTGCAATTTCTTGGACCGTT+CGG | - | chr8.4:80370414-80370433 | None:intergenic | 45.0% | |
GAAGATATGGCCAAGCTTTC+TGG | - | chr8.4:80370860-80370879 | None:intergenic | 45.0% | |
GAAGGAAGTCTTCAACTGAG+TGG | + | chr8.4:80369715-80369734 | MS.gene022565:CDS | 45.0% | |
GAGGCCATTCCCATTAAAGT+TGG | + | chr8.4:80369904-80369923 | MS.gene022565:CDS | 45.0% | |
GATATCCTGGAAGAGCTTTC+CGG | - | chr8.4:80370982-80371001 | None:intergenic | 45.0% | |
GCATGGTAGCAACAGTAACA+AGG | + | chr8.4:80369759-80369778 | MS.gene022565:CDS | 45.0% | |
GCCACCAACTTTAATGGGAA+TGG | - | chr8.4:80369911-80369930 | None:intergenic | 45.0% | |
GCCATTCCCATTAAAGTTGG+TGG | + | chr8.4:80369907-80369926 | MS.gene022565:CDS | 45.0% | |
GTACACACACACACACAACA+TGG | + | chr8.4:80370291-80370310 | MS.gene022565:intron | 45.0% | |
GTCAGCACATTTGTGGTTGA+TGG | + | chr8.4:80371137-80371156 | MS.gene022565:intron | 45.0% | |
TCAACCATTGACACCAACTG+AGG | + | chr8.4:80370776-80370795 | MS.gene022565:CDS | 45.0% | |
TCATGCAGTCAGCACATTTG+TGG | + | chr8.4:80371130-80371149 | MS.gene022565:intron | 45.0% | |
TCTCGAATTTGGATTGCCTG+CGG | - | chr8.4:80371311-80371330 | None:intergenic | 45.0% | |
TGTTCAAGCTGTTCTTGCTG+AGG | + | chr8.4:80369885-80369904 | MS.gene022565:CDS | 45.0% | |
! | CTTTTGCTGCATAATCCAGC+TGG | - | chr8.4:80371483-80371502 | None:intergenic | 45.0% |
! | TCATCTCAAGCTGTGATGGA+AGG | + | chr8.4:80369697-80369716 | MS.gene022565:CDS | 45.0% |
!! | CAGTTGGTGTCAATGGTTGA+AGG | - | chr8.4:80370776-80370795 | None:intergenic | 45.0% |
!! | CTTTGGCTTTGCAGAGATGA+TGG | - | chr8.4:80370931-80370950 | None:intergenic | 45.0% |
!! | TGGTCTTGTTGCAACTGGTT+TGG | + | chr8.4:80369849-80369868 | MS.gene022565:CDS | 45.0% |
!! | TGTGGTTGATGGATCGAGAT+TGG | + | chr8.4:80371148-80371167 | MS.gene022565:intron | 45.0% |
AGGAGGGCCACCAACTTTAA+TGG | - | chr8.4:80369917-80369936 | None:intergenic | 50.0% | |
AGTAGCAGAAGAGCAGTGCT+TGG | + | chr8.4:80369829-80369848 | MS.gene022565:CDS | 50.0% | |
CAAGCTATGGCATCAATGGC+TGG | + | chr8.4:80369658-80369677 | MS.gene022565:CDS | 50.0% | |
GGAGGGCCACCAACTTTAAT+GGG | - | chr8.4:80369916-80369935 | None:intergenic | 50.0% | |
GGCTCAAGCTATGGCATCAA+TGG | + | chr8.4:80369654-80369673 | MS.gene022565:CDS | 50.0% | |
GTCTCAGAGCTGGCTATCTT+CGG | + | chr8.4:80370892-80370911 | MS.gene022565:CDS | 50.0% | |
TACGGTGAATCCCTACTGCA+TGG | + | chr8.4:80370506-80370525 | MS.gene022565:intron | 50.0% | |
TACTTACGAAGGCCACCAGA+AGG | - | chr8.4:80369943-80369962 | None:intergenic | 50.0% | |
! | TCAATGGCTGGTTGCTTACG+TGG | + | chr8.4:80369670-80369689 | MS.gene022565:CDS | 50.0% |
!! | GTGCTTGGTCTTGTTGCAAC+TGG | + | chr8.4:80369844-80369863 | MS.gene022565:CDS | 50.0% |
ACTCACCGGAAAGCTCTTCC+AGG | + | chr8.4:80370974-80370993 | MS.gene022565:CDS | 55.0% | |
ATCGGATTACGCAGCACCGT+GGG | - | chr8.4:80371398-80371417 | None:intergenic | 55.0% | |
TATCGGATTACGCAGCACCG+TGG | - | chr8.4:80371399-80371418 | None:intergenic | 55.0% | |
TCTCAATTGCGGTCACGCTG+TGG | + | chr8.4:80371357-80371376 | MS.gene022565:intron | 55.0% | |
TGAGGCAGCTGCAAGAGCTA+AGG | + | chr8.4:80370794-80370813 | MS.gene022565:CDS | 55.0% | |
TGCATGAGATTGCTAGCCGC+AGG | + | chr8.4:80371292-80371311 | MS.gene022565:intron | 55.0% | |
TTACGAAGGCCACCAGAAGG+TGG | - | chr8.4:80369940-80369959 | None:intergenic | 55.0% | |
!! | GCTGCCTCAGTTGGTGTCAA+TGG | - | chr8.4:80370783-80370802 | None:intergenic | 55.0% |
!! | GTGCTGACTGCATGAATGCG+TGG | - | chr8.4:80371125-80371144 | None:intergenic | 55.0% |
GCTCTTGCAGCTGCCTCAGT+TGG | - | chr8.4:80370792-80370811 | None:intergenic | 60.0% | |
AGGCCACCAGAAGGTGGAGG+AGG | - | chr8.4:80369934-80369953 | None:intergenic | 65.0% | |
CGAAGGCCACCAGAAGGTGG+AGG | - | chr8.4:80369937-80369956 | None:intergenic | 65.0% | |
GGCCACCAGAAGGTGGAGGA+GGG | - | chr8.4:80369933-80369952 | None:intergenic | 65.0% | |
GGCCCTCCTCCACCTTCTGG+TGG | + | chr8.4:80369928-80369947 | MS.gene022565:CDS | 70.0% | |
GGTGGCCCTCCTCCACCTTC+TGG | + | chr8.4:80369925-80369944 | MS.gene022565:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 80369652 | 80371582 | 80369652 | ID=MS.gene022565 |
chr8.4 | mRNA | 80369652 | 80371582 | 80369652 | ID=MS.gene022565.t1;Parent=MS.gene022565 |
chr8.4 | exon | 80369652 | 80369955 | 80369652 | ID=MS.gene022565.t1.exon1;Parent=MS.gene022565.t1 |
chr8.4 | CDS | 80369652 | 80369955 | 80369652 | ID=cds.MS.gene022565.t1;Parent=MS.gene022565.t1 |
chr8.4 | exon | 80370712 | 80371007 | 80370712 | ID=MS.gene022565.t1.exon2;Parent=MS.gene022565.t1 |
chr8.4 | CDS | 80370712 | 80371007 | 80370712 | ID=cds.MS.gene022565.t1;Parent=MS.gene022565.t1 |
chr8.4 | exon | 80371484 | 80371582 | 80371484 | ID=MS.gene022565.t1.exon3;Parent=MS.gene022565.t1 |
chr8.4 | CDS | 80371484 | 80371582 | 80371484 | ID=cds.MS.gene022565.t1;Parent=MS.gene022565.t1 |
Gene Sequence |
Protein sequence |