Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022701.t1 | XP_003626834.1 | 97.8 | 603 | 13 | 0 | 6 | 608 | 20 | 622 | 0.00E+00 | 1182.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022701.t1 | F4HVY0 | 58.8 | 607 | 245 | 2 | 4 | 605 | 18 | 624 | 3.5e-218 | 759.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022701.t1 | G7LDH6 | 97.8 | 603 | 13 | 0 | 6 | 608 | 20 | 622 | 0.0e+00 | 1182.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene035646 | MS.gene022701 | PPI |
MS.gene022701 | MS.gene87888 | PPI |
MS.gene022701 | MS.gene018395 | PPI |
MS.gene012465 | MS.gene022701 | PPI |
MS.gene57954 | MS.gene022701 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022701.t1 | MTR_8g009560 | 98.010 | 603 | 12 | 0 | 6 | 608 | 20 | 622 | 0.0 | 1235 |
MS.gene022701.t1 | MTR_8g009590 | 63.561 | 601 | 218 | 1 | 4 | 603 | 54 | 654 | 0.0 | 808 |
MS.gene022701.t1 | MTR_7g090100 | 64.942 | 599 | 204 | 2 | 4 | 602 | 18 | 610 | 0.0 | 804 |
MS.gene022701.t1 | MTR_7g090120 | 63.940 | 599 | 212 | 2 | 4 | 602 | 18 | 612 | 0.0 | 792 |
MS.gene022701.t1 | MTR_7g090140 | 63.667 | 600 | 213 | 2 | 4 | 603 | 18 | 612 | 0.0 | 787 |
MS.gene022701.t1 | MTR_4g054290 | 63.667 | 600 | 214 | 2 | 4 | 603 | 18 | 613 | 0.0 | 773 |
MS.gene022701.t1 | MTR_4g054150 | 61.818 | 605 | 206 | 3 | 4 | 608 | 18 | 597 | 0.0 | 740 |
MS.gene022701.t1 | MTR_7g090140 | 64.547 | 519 | 182 | 1 | 85 | 603 | 1 | 517 | 0.0 | 691 |
MS.gene022701.t1 | MTR_4g129630 | 33.882 | 608 | 390 | 6 | 6 | 601 | 17 | 624 | 4.94e-123 | 377 |
MS.gene022701.t1 | MTR_8g009550 | 89.333 | 75 | 5 | 1 | 158 | 232 | 16 | 87 | 1.68e-38 | 137 |
MS.gene022701.t1 | MTR_4g054320 | 73.585 | 53 | 14 | 0 | 551 | 603 | 43 | 95 | 2.40e-24 | 97.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022701.t1 | AT1G02205 | 60.328 | 610 | 237 | 2 | 1 | 605 | 16 | 625 | 0.0 | 774 |
MS.gene022701.t1 | AT1G02205 | 60.626 | 607 | 234 | 2 | 4 | 605 | 18 | 624 | 0.0 | 772 |
MS.gene022701.t1 | AT1G02205 | 59.967 | 612 | 235 | 2 | 4 | 605 | 18 | 629 | 0.0 | 769 |
MS.gene022701.t1 | AT1G02190 | 56.579 | 608 | 251 | 6 | 4 | 601 | 18 | 622 | 0.0 | 691 |
MS.gene022701.t1 | AT1G02190 | 56.579 | 608 | 247 | 7 | 4 | 601 | 18 | 618 | 0.0 | 686 |
MS.gene022701.t1 | AT2G37700 | 56.478 | 602 | 254 | 3 | 4 | 601 | 18 | 615 | 0.0 | 679 |
MS.gene022701.t1 | AT2G37700 | 56.312 | 602 | 246 | 4 | 4 | 601 | 18 | 606 | 0.0 | 672 |
MS.gene022701.t1 | AT2G37700 | 52.326 | 602 | 242 | 4 | 4 | 601 | 18 | 578 | 0.0 | 606 |
MS.gene022701.t1 | AT1G02205 | 59.161 | 453 | 180 | 2 | 158 | 605 | 8 | 460 | 0.0 | 575 |
MS.gene022701.t1 | AT2G37700 | 57.952 | 459 | 188 | 2 | 4 | 461 | 18 | 472 | 0.0 | 522 |
MS.gene022701.t1 | AT1G02205 | 56.349 | 378 | 160 | 2 | 233 | 605 | 8 | 385 | 5.83e-162 | 468 |
MS.gene022701.t1 | AT5G57800 | 33.552 | 611 | 391 | 6 | 3 | 598 | 14 | 624 | 6.36e-116 | 359 |
Find 120 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTGATTTCATGAATAATT+TGG | 0.071224 | 8.4:+78460731 | MS.gene022701:CDS |
TGTTTAGCATTGACAAATTA+TGG | 0.171434 | 8.4:+78465513 | MS.gene022701:CDS |
CCAATTTATGATTACATCTA+TGG | 0.221817 | 8.4:+78463056 | MS.gene022701:CDS |
TCCCAATCTTAGTTGATATA+TGG | 0.227104 | 8.4:-78463180 | None:intergenic |
TCATGTGGCCATTCACCTTT+TGG | 0.234069 | 8.4:+78463252 | MS.gene022701:CDS |
CTCGAAGTCCCAGAAGAATT+TGG | 0.242161 | 8.4:+78464622 | MS.gene022701:CDS |
AGCATCCTCACCATCATATA+TGG | 0.248897 | 8.4:-78458881 | None:intergenic |
CTTAGTTGATATATGGATTC+AGG | 0.250871 | 8.4:-78463173 | None:intergenic |
CTGGGAAAACCAAATTCTTC+TGG | 0.252091 | 8.4:-78464631 | None:intergenic |
TTTGGAGGGAATTGGGAAAA+TGG | 0.256646 | 8.4:-78464883 | None:intergenic |
GAGTGGACATTGGATAAATT+AGG | 0.267216 | 8.4:-78464958 | None:intergenic |
GAAATTTCTTTGGAGGGAAT+TGG | 0.270137 | 8.4:-78464891 | None:intergenic |
GGATGCTACATGACCAAATT+TGG | 0.279073 | 8.4:+78458897 | MS.gene022701:CDS |
AAGATGGAGAAGACTTTCTT+AGG | 0.303702 | 8.4:-78460777 | None:intergenic |
GTAATTGCTGTTGTGTATAA+TGG | 0.316269 | 8.4:-78460666 | None:intergenic |
AGGATAAACTCACAAGTTAT+TGG | 0.325113 | 8.4:-78459672 | None:intergenic |
AACAATCTTCATCTTAAGTT+GGG | 0.326096 | 8.4:-78464276 | None:intergenic |
CCATAGATGTAATCATAAAT+TGG | 0.332696 | 8.4:-78463056 | None:intergenic |
CATGCACTCATAACTCTTCT+TGG | 0.337343 | 8.4:-78465428 | None:intergenic |
AGTGGACATTGGATAAATTA+GGG | 0.340224 | 8.4:-78464957 | None:intergenic |
ATTGATTTCATGAATAATTT+GGG | 0.340630 | 8.4:+78460732 | MS.gene022701:CDS |
ATCATGAGAATCTTCAATTA+AGG | 0.341373 | 8.4:+78464594 | MS.gene022701:CDS |
ATGAACGTCCCAACCTTCTA+AGG | 0.344095 | 8.4:-78465474 | None:intergenic |
GGTACAAACAATGATCCTTT+TGG | 0.353128 | 8.4:-78464862 | None:intergenic |
GAGAATGATATCTAGAATAA+AGG | 0.354501 | 8.4:-78459623 | None:intergenic |
ATCCATATATCAACTAAGAT+TGG | 0.361402 | 8.4:+78463178 | MS.gene022701:CDS |
GGAATATTGCACGCCTTAGA+AGG | 0.363668 | 8.4:+78465461 | MS.gene022701:CDS |
ACCTTTGCAGAATTTGATCC+TGG | 0.365054 | 8.4:-78464650 | None:intergenic |
ATATGCTCAATTTGCAATCA+TGG | 0.374703 | 8.4:+78463333 | MS.gene022701:CDS |
ATGGTGAACTATACATTAAA+AGG | 0.375204 | 8.4:+78464249 | MS.gene022701:CDS |
GAGATAAAGAGATCCAAATT+TGG | 0.381279 | 8.4:-78458910 | None:intergenic |
CACTACATCATACACAATTT+CGG | 0.388068 | 8.4:+78463012 | MS.gene022701:CDS |
CAGTGGAGTTTCTTTACTAT+TGG | 0.392734 | 8.4:+78459574 | MS.gene022701:CDS |
CTTAAGATGAAGATTGTTGA+TGG | 0.396304 | 8.4:+78464281 | MS.gene022701:CDS |
AGCAGAGTTGAGCAAAGTTA+AGG | 0.398577 | 8.4:+78463523 | MS.gene022701:CDS |
CAACAATCTTCATCTTAAGT+TGG | 0.401690 | 8.4:-78464277 | None:intergenic |
AAATTTCTTTGGAGGGAATT+GGG | 0.405095 | 8.4:-78464890 | None:intergenic |
TGGGAAAACCAAATTCTTCT+GGG | 0.421201 | 8.4:-78464630 | None:intergenic |
GCATCCATAGCATCATTTGC+CGG | 0.421864 | 8.4:+78460696 | MS.gene022701:CDS |
AGTTAATTCTTTGTGTGAAA+GGG | 0.433652 | 8.4:+78464400 | MS.gene022701:CDS |
ATACTTAAGGATTGGAAAGA+TGG | 0.436601 | 8.4:-78460793 | None:intergenic |
TTTGGTCTGTTCTTGTCACT+TGG | 0.441280 | 8.4:+78463270 | MS.gene022701:CDS |
TGTGAATAGTCCAGAGGAAA+AGG | 0.447569 | 8.4:+78458835 | MS.gene022701:CDS |
CACACCACTAGTTCTCCATA+TGG | 0.447709 | 8.4:-78459523 | None:intergenic |
GTGTATACATGGTATACTTA+AGG | 0.448902 | 8.4:-78460806 | None:intergenic |
CAAATTCTTCTGGGACTTCG+AGG | 0.450017 | 8.4:-78464621 | None:intergenic |
ATGAGTGCATGGCGTATTGC+TGG | 0.452189 | 8.4:+78465440 | MS.gene022701:CDS |
ATCAATGTAAGCAAGATAAC+CGG | 0.460548 | 8.4:-78460715 | None:intergenic |
TCCATATATCAACTAAGATT+GGG | 0.460592 | 8.4:+78463179 | MS.gene022701:CDS |
TTTGTGTGAAAGGGGTACTA+AGG | 0.466291 | 8.4:+78464409 | MS.gene022701:CDS |
GGAGACTTGCTCAATAGATA+TGG | 0.468212 | 8.4:+78464230 | MS.gene022701:CDS |
AATAGACTATAATTCAATCA+AGG | 0.470808 | 8.4:-78465583 | None:intergenic |
ATGACAATTCTTCTACATAG+TGG | 0.472384 | 8.4:+78459549 | MS.gene022701:CDS |
AGATTGAGGTGAGGAGGCTA+AGG | 0.474871 | 8.4:-78463210 | None:intergenic |
ATTGCACGCCTTAGAAGGTT+GGG | 0.477526 | 8.4:+78465466 | MS.gene022701:CDS |
TAGTTAATTCTTTGTGTGAA+AGG | 0.480274 | 8.4:+78464399 | MS.gene022701:CDS |
CTTACTTGAACATGGAACCT+TGG | 0.484638 | 8.4:-78463362 | None:intergenic |
TGTGTCAAATGCACCACATC+TGG | 0.484985 | 8.4:-78463140 | None:intergenic |
TAGGCTATGTGTTCTGCAAA+TGG | 0.488094 | 8.4:-78460624 | None:intergenic |
TATGCTCAATTTGCAATCAT+GGG | 0.489138 | 8.4:+78463334 | MS.gene022701:CDS |
AATTTGCAGATATGGCTAGT+TGG | 0.497195 | 8.4:+78464805 | MS.gene022701:intron |
AGTTATTGGTTCTGTAACAA+TGG | 0.501203 | 8.4:-78459658 | None:intergenic |
TGATGGCAGTAGCTTGGTTG+TGG | 0.501613 | 8.4:+78464298 | MS.gene022701:CDS |
GCATCCTCACCATCATATAT+GGG | 0.502244 | 8.4:-78458880 | None:intergenic |
TATTGCACGCCTTAGAAGGT+TGG | 0.503606 | 8.4:+78465465 | MS.gene022701:CDS |
TGCAATCATGGGTTATTCCA+AGG | 0.508500 | 8.4:+78463345 | MS.gene022701:CDS |
AGGGGATGATTAATCTTCAA+TGG | 0.509840 | 8.4:-78465563 | None:intergenic |
TACATGGTATACTTAAGGAT+TGG | 0.514880 | 8.4:-78460801 | None:intergenic |
CCCAGGATCAAATTCTGCAA+AGG | 0.521549 | 8.4:+78464649 | MS.gene022701:CDS |
CCTCATCTTCCCATATATGA+TGG | 0.523645 | 8.4:+78458871 | MS.gene022701:CDS |
TCTCGCCATCGAACCGCCAA+AGG | 0.525130 | 8.4:+78458929 | MS.gene022701:CDS |
TGTGTGCTCTTTGCTATGAA+TGG | 0.527943 | 8.4:-78458803 | None:intergenic |
CCTCAAAACTTACTTGAACA+TGG | 0.529432 | 8.4:-78463370 | None:intergenic |
GGCAAGCAAGTCTTCAGCAT+GGG | 0.530375 | 8.4:+78465534 | MS.gene022701:CDS |
CCTTTGCAGAATTTGATCCT+GGG | 0.531383 | 8.4:-78464649 | None:intergenic |
ATATGGATTCAGGAGTAGTA+AGG | 0.537682 | 8.4:-78463163 | None:intergenic |
AAGTTGATCGAGAAAGCAAT+TGG | 0.540340 | 8.4:+78458990 | MS.gene022701:CDS |
AGTGACAAGAACAGACCAAA+AGG | 0.542812 | 8.4:-78463267 | None:intergenic |
TGGAATGCTGTTAAGAACAA+TGG | 0.543327 | 8.4:-78464321 | None:intergenic |
TGAATGGCCACATGAAATAG+AGG | 0.548660 | 8.4:-78463244 | None:intergenic |
ATAGACTATAATTCAATCAA+GGG | 0.551441 | 8.4:-78465582 | None:intergenic |
CCTCACCTCAATCTTCTGAA+TGG | 0.552731 | 8.4:+78463219 | MS.gene022701:CDS |
GTTAATTCTTTGTGTGAAAG+GGG | 0.559819 | 8.4:+78464401 | MS.gene022701:CDS |
AAGTTTAGGTCTTTCAAACC+AGG | 0.561043 | 8.4:+78463550 | MS.gene022701:CDS |
GATTGTTGATGGCAGTAGCT+TGG | 0.561867 | 8.4:+78464292 | MS.gene022701:CDS |
GGTTGGGACGTTCATGAATG+TGG | 0.564471 | 8.4:+78465482 | MS.gene022701:CDS |
AGAAGAAGGTGCACCAGATG+TGG | 0.564679 | 8.4:+78463127 | MS.gene022701:CDS |
TACTTACGATGGTGTATACA+TGG | 0.565128 | 8.4:-78460817 | None:intergenic |
ATAACCGGCAAATGATGCTA+TGG | 0.566877 | 8.4:-78460700 | None:intergenic |
AATTCATTGAAGAAAGAAGA+AGG | 0.567139 | 8.4:+78463113 | MS.gene022701:CDS |
AGAACAGACCAAAAGGTGAA+TGG | 0.569915 | 8.4:-78463260 | None:intergenic |
TCTTTGTGGTAGACTTGACA+AGG | 0.570755 | 8.4:+78464364 | MS.gene022701:CDS |
TGCTGTTGTGTATAATGGAA+TGG | 0.580525 | 8.4:-78460661 | None:intergenic |
ACACCACTAGTTCTCCATAT+GGG | 0.582237 | 8.4:-78459522 | None:intergenic |
CAAGAAGAGTTATGAGTGCA+TGG | 0.584185 | 8.4:+78465429 | MS.gene022701:CDS |
CCATCATATATGGGAAGATG+AGG | 0.585846 | 8.4:-78458871 | None:intergenic |
ACAATCTTCATCTTAAGTTG+GGG | 0.589510 | 8.4:-78464275 | None:intergenic |
ATCTACTAACCTCACAAGAG+TGG | 0.589871 | 8.4:-78464975 | None:intergenic |
ATCCAATGTCCACTCTTGTG+AGG | 0.593116 | 8.4:+78464966 | MS.gene022701:CDS |
TTCAGAAGATTGAGGTGAGG+AGG | 0.601115 | 8.4:-78463216 | None:intergenic |
AGGTACCATTCAGAAGATTG+AGG | 0.601316 | 8.4:-78463224 | None:intergenic |
TCTTCTACATAGTGGACCAG+TGG | 0.617911 | 8.4:+78459557 | MS.gene022701:CDS |
GTGGACATTGGATAAATTAG+GGG | 0.619031 | 8.4:-78464956 | None:intergenic |
TCTTCCCATATATGATGGTG+AGG | 0.622744 | 8.4:+78458876 | MS.gene022701:CDS |
TGGCAAGCAAGTCTTCAGCA+TGG | 0.629653 | 8.4:+78465533 | MS.gene022701:CDS |
AACCTCACAAGAGTGGACAT+TGG | 0.630620 | 8.4:-78464968 | None:intergenic |
CAATAGTAAAGAAACTCCAC+TGG | 0.634669 | 8.4:-78459573 | None:intergenic |
TAGACTATAATTCAATCAAG+GGG | 0.637835 | 8.4:-78465581 | None:intergenic |
TTACCCATATGGAGAACTAG+TGG | 0.639339 | 8.4:+78459519 | MS.gene022701:CDS |
AATGGTACCTCTATTTCATG+TGG | 0.646040 | 8.4:+78463237 | MS.gene022701:CDS |
AATGGATGATACAATGCAGT+GGG | 0.651214 | 8.4:+78458769 | None:intergenic |
TGGACATTGGATAAATTAGG+GGG | 0.663725 | 8.4:-78464955 | None:intergenic |
AAATGGATGATACAATGCAG+TGG | 0.667694 | 8.4:+78458768 | None:intergenic |
TTTCATTGTGAATAGTCCAG+AGG | 0.668809 | 8.4:+78458829 | MS.gene022701:CDS |
GGAAGATGAGGAAGTTACTG+AGG | 0.681674 | 8.4:-78458859 | None:intergenic |
CATATGGAGAACTAGTGGTG+TGG | 0.687095 | 8.4:+78459524 | MS.gene022701:CDS |
AGTTGGAGATCAATGTGAGG+AGG | 0.689214 | 8.4:+78464822 | MS.gene022701:CDS |
ATTGTGTATGATGTAGTGAG+TGG | 0.695326 | 8.4:-78463007 | None:intergenic |
CCATTCAGAAGATTGAGGTG+AGG | 0.698317 | 8.4:-78463219 | None:intergenic |
GCTAGTTGGAGATCAATGTG+AGG | 0.727664 | 8.4:+78464819 | MS.gene022701:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTAATAATTTTTATTTTTA+AGG | + | chr8.4:78463401-78463420 | MS.gene022701:intron | 0.0% |
!! | GATCAAAAAATATTAAATTA+AGG | + | chr8.4:78459386-78459405 | MS.gene022701:intron | 10.0% |
!! | TAAAATAAAAAACAAAACAT+AGG | - | chr8.4:78459695-78459714 | None:intergenic | 10.0% |
!! | TTTAACTAATATAAGTTAAA+AGG | + | chr8.4:78461077-78461096 | MS.gene022701:intron | 10.0% |
!!! | GTCTTTTTTTTTTTTTTTTA+TGG | - | chr8.4:78463768-78463787 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTTTTTATGG+TGG | - | chr8.4:78463765-78463784 | None:intergenic | 10.0% |
!! | AAATCATAAGAAGAAAAAAA+AGG | - | chr8.4:78462929-78462948 | None:intergenic | 15.0% |
!! | AAGACATATATAAATATACA+TGG | + | chr8.4:78459338-78459357 | MS.gene022701:intron | 15.0% |
!! | AATCATAAGAAGAAAAAAAA+GGG | - | chr8.4:78462928-78462947 | None:intergenic | 15.0% |
!! | ACATATTAATTAACAATCTA+GGG | - | chr8.4:78460522-78460541 | None:intergenic | 15.0% |
!! | ATCAAACATTATAAAATTAG+AGG | - | chr8.4:78463581-78463600 | None:intergenic | 15.0% |
!! | ATTTATATATGTCTTTAAGT+TGG | - | chr8.4:78459333-78459352 | None:intergenic | 15.0% |
!! | CTAATATCTTCAATTTAATT+TGG | + | chr8.4:78460583-78460602 | MS.gene022701:intron | 15.0% |
!! | CTACTAAATTATTTAAGAAT+TGG | + | chr8.4:78465051-78465070 | MS.gene022701:intron | 15.0% |
!! | TAAATGAAAAAAAAGCTTAA+AGG | + | chr8.4:78464141-78464160 | MS.gene022701:intron | 15.0% |
!! | TGATAGTAACTATTTATATT+GGG | + | chr8.4:78462153-78462172 | MS.gene022701:intron | 15.0% |
!! | TTGTATATTCAATATCTTAA+TGG | + | chr8.4:78460876-78460895 | MS.gene022701:intron | 15.0% |
!! | TTTAGTCTAAGTATTTAATA+TGG | + | chr8.4:78461592-78461611 | MS.gene022701:intron | 15.0% |
!!! | AAATTATTTTGGTTTCATTT+TGG | + | chr8.4:78463971-78463990 | MS.gene022701:intron | 15.0% |
!!! | AAGTTGGAAATTTTATAATA+GGG | - | chr8.4:78459317-78459336 | None:intergenic | 15.0% |
!!! | AATGCATTGATATTTTATAT+TGG | + | chr8.4:78459468-78459487 | MS.gene022701:CDS | 15.0% |
!!! | ATATAATTTCGTTTTTGAAA+TGG | + | chr8.4:78462695-78462714 | MS.gene022701:intron | 15.0% |
!!! | ATCTTTATTTCCATATTATT+GGG | - | chr8.4:78459735-78459754 | None:intergenic | 15.0% |
!!! | ATTGATTTCATGAATAATTT+GGG | + | chr8.4:78460732-78460751 | MS.gene022701:CDS | 15.0% |
!!! | GTCAATACATATAATTTTTT+TGG | + | chr8.4:78463835-78463854 | MS.gene022701:intron | 15.0% |
!!! | TAAGTTGGAAATTTTATAAT+AGG | - | chr8.4:78459318-78459337 | None:intergenic | 15.0% |
!!! | TAATTTCATTCCTTTTAAAT+GGG | + | chr8.4:78460901-78460920 | MS.gene022701:intron | 15.0% |
!!! | TAGTAATTTTGAATTAATAG+CGG | + | chr8.4:78461199-78461218 | MS.gene022701:intron | 15.0% |
!!! | TTAATAGAGTTTTTTTTATG+TGG | + | chr8.4:78461170-78461189 | MS.gene022701:intron | 15.0% |
!!! | TTAATTTCATTCCTTTTAAA+TGG | + | chr8.4:78460900-78460919 | MS.gene022701:intron | 15.0% |
!!! | TTAATTTTGTTCATTCAATT+TGG | - | chr8.4:78460034-78460053 | None:intergenic | 15.0% |
!!! | TTATAATGTTTGATTTTACA+CGG | + | chr8.4:78463587-78463606 | MS.gene022701:intron | 15.0% |
!!! | TTGATAGTAACTATTTATAT+TGG | + | chr8.4:78462152-78462171 | MS.gene022701:intron | 15.0% |
!!! | TTTGGTTCTTTAAATTATTT+TGG | + | chr8.4:78463960-78463979 | MS.gene022701:intron | 15.0% |
!!! | TTTTGTAGTATCTTTTTAAA+TGG | + | chr8.4:78463456-78463475 | MS.gene022701:intron | 15.0% |
!!! | TTTTTGGCTAAATTATATTT+TGG | + | chr8.4:78463851-78463870 | MS.gene022701:intron | 15.0% |
!! | AAAAGAAAATTTAATTGTGG+TGG | - | chr8.4:78459880-78459899 | None:intergenic | 20.0% |
!! | AAATAGATGTAGCAATATAA+TGG | + | chr8.4:78460177-78460196 | MS.gene022701:intron | 20.0% |
!! | AATAGATGTAGCAATATAAT+GGG | + | chr8.4:78460178-78460197 | MS.gene022701:intron | 20.0% |
!! | AATGTGTTAAGATTTGATAA+AGG | - | chr8.4:78460857-78460876 | None:intergenic | 20.0% |
!! | AATTATGAAGGTAAAAAACT+AGG | + | chr8.4:78461961-78461980 | MS.gene022701:intron | 20.0% |
!! | ACCAAATTTATTAGATAAAG+AGG | + | chr8.4:78462811-78462830 | MS.gene022701:intron | 20.0% |
!! | ACTTATAAAACCATTTGTAA+GGG | - | chr8.4:78462359-78462378 | None:intergenic | 20.0% |
!! | AGTGGTTATATATTATAACT+CGG | - | chr8.4:78462638-78462657 | None:intergenic | 20.0% |
!! | ATAACATCACAATATATACA+CGG | - | chr8.4:78465104-78465123 | None:intergenic | 20.0% |
!! | CACATATTAATTAACAATCT+AGG | - | chr8.4:78460523-78460542 | None:intergenic | 20.0% |
!! | GAATGAACAAAATTAAAGAT+GGG | + | chr8.4:78460038-78460057 | MS.gene022701:intron | 20.0% |
!! | GAGAAAAGAAAATTTAATTG+TGG | - | chr8.4:78459883-78459902 | None:intergenic | 20.0% |
!! | TACACATATTATAGTAAGAA+AGG | - | chr8.4:78462899-78462918 | None:intergenic | 20.0% |
!! | TACTTATAAAACCATTTGTA+AGG | - | chr8.4:78462360-78462379 | None:intergenic | 20.0% |
!! | TATAGTTTAAAAAATCAGCA+TGG | + | chr8.4:78459818-78459837 | MS.gene022701:intron | 20.0% |
!! | TCAATTAACCTCTAATAAAA+GGG | + | chr8.4:78462086-78462105 | MS.gene022701:intron | 20.0% |
!! | TCCTCTTTATCTAATAAATT+TGG | - | chr8.4:78462815-78462834 | None:intergenic | 20.0% |
!! | TGAATGAACAAAATTAAAGA+TGG | + | chr8.4:78460037-78460056 | MS.gene022701:intron | 20.0% |
!! | TTCAATTAACCTCTAATAAA+AGG | + | chr8.4:78462085-78462104 | MS.gene022701:intron | 20.0% |
!! | TTTACGATACTTATAAGATA+AGG | - | chr8.4:78462199-78462218 | None:intergenic | 20.0% |
!! | TTTATTTGAATTTGCAGATA+TGG | + | chr8.4:78464797-78464816 | MS.gene022701:intron | 20.0% |
!!! | AAAAATAACACTAATGCTTT+TGG | + | chr8.4:78464742-78464761 | MS.gene022701:intron | 20.0% |
!!! | AAAACTTGATTTTCTTCTTT+TGG | - | chr8.4:78464344-78464363 | None:intergenic | 20.0% |
!!! | AAAGTTAAGGTTTTAAGTTT+AGG | + | chr8.4:78463536-78463555 | MS.gene022701:CDS | 20.0% |
!!! | ATATTTTTTTTTGTGTGTGT+AGG | + | chr8.4:78459427-78459446 | MS.gene022701:intron | 20.0% |
!!! | ATCTTTTAAGTCACAAAATT+TGG | + | chr8.4:78464024-78464043 | MS.gene022701:intron | 20.0% |
!!! | ATTTTAAATTTTGTTGGTAG+TGG | - | chr8.4:78459844-78459863 | None:intergenic | 20.0% |
!!! | CATCTTTATTTCCATATTAT+TGG | - | chr8.4:78459736-78459755 | None:intergenic | 20.0% |
!!! | CATTGATTTCATGAATAATT+TGG | + | chr8.4:78460731-78460750 | MS.gene022701:CDS | 20.0% |
!!! | GTGTGAATTTTAAATTTTGT+TGG | - | chr8.4:78459850-78459869 | None:intergenic | 20.0% |
!!! | TACTATGACTTTATTTCATA+GGG | - | chr8.4:78461912-78461931 | None:intergenic | 20.0% |
!!! | TATATATATTTGTTACAGAG+TGG | - | chr8.4:78462656-78462675 | None:intergenic | 20.0% |
!!! | TATTTTTTTTTGTGTGTGTA+GGG | + | chr8.4:78459428-78459447 | MS.gene022701:intron | 20.0% |
!!! | TGATATTTTATATTGGTCAA+TGG | + | chr8.4:78459475-78459494 | MS.gene022701:CDS | 20.0% |
!!! | TTGGTCACTTAATTTAATTT+TGG | + | chr8.4:78463870-78463889 | MS.gene022701:intron | 20.0% |
!!! | TTTAAAGTTTGCATCAATAA+TGG | + | chr8.4:78461997-78462016 | MS.gene022701:intron | 20.0% |
! | AAAGGTTGTTTATATAGCAA+TGG | + | chr8.4:78461095-78461114 | MS.gene022701:intron | 25.0% |
! | AACAATCTTCATCTTAAGTT+GGG | - | chr8.4:78464279-78464298 | None:intergenic | 25.0% |
! | AATTCATTGAAGAAAGAAGA+AGG | + | chr8.4:78463113-78463132 | MS.gene022701:CDS | 25.0% |
! | ACACTAAGTAATCGTAAATA+AGG | - | chr8.4:78459102-78459121 | None:intergenic | 25.0% |
! | ACTTAATGTGAGAAATTCTT+AGG | - | chr8.4:78461847-78461866 | None:intergenic | 25.0% |
! | AGAATTTCTCACATTAAGTT+AGG | + | chr8.4:78461848-78461867 | MS.gene022701:intron | 25.0% |
! | AGTTAATTCTTTGTGTGAAA+GGG | + | chr8.4:78464400-78464419 | MS.gene022701:CDS | 25.0% |
! | ATAGATGTAGCAATATAATG+GGG | + | chr8.4:78460179-78460198 | MS.gene022701:intron | 25.0% |
! | ATATAAACCAAAGCTATGTT+TGG | - | chr8.4:78459258-78459277 | None:intergenic | 25.0% |
! | ATATATGTTCAATGAATGCA+GGG | + | chr8.4:78464209-78464228 | MS.gene022701:intron | 25.0% |
! | ATATGGAAATAAAGATGAGT+AGG | + | chr8.4:78459739-78459758 | MS.gene022701:intron | 25.0% |
! | ATCATGAGAATCTTCAATTA+AGG | + | chr8.4:78464594-78464613 | MS.gene022701:CDS | 25.0% |
! | ATCCAACAGATTAATTATGA+AGG | + | chr8.4:78461949-78461968 | MS.gene022701:intron | 25.0% |
! | ATCCATATATCAACTAAGAT+TGG | + | chr8.4:78463178-78463197 | MS.gene022701:CDS | 25.0% |
! | ATGGACATATTAACAATCTA+GGG | - | chr8.4:78460414-78460433 | None:intergenic | 25.0% |
! | ATGGTGAACTATACATTAAA+AGG | + | chr8.4:78464249-78464268 | MS.gene022701:CDS | 25.0% |
! | ATTGAAGATGCTTACATATA+AGG | - | chr8.4:78462071-78462090 | None:intergenic | 25.0% |
! | CTAAATATATGATATGTGAC+AGG | + | chr8.4:78462982-78463001 | MS.gene022701:intron | 25.0% |
! | CTTATAAAACCATTTGTAAG+GGG | - | chr8.4:78462358-78462377 | None:intergenic | 25.0% |
! | GACACAAAAAATAAACTCAA+GGG | - | chr8.4:78463908-78463927 | None:intergenic | 25.0% |
! | GGAGGAGAATAAAAATTATT+GGG | + | chr8.4:78460200-78460219 | MS.gene022701:intron | 25.0% |
! | TAAAGAGGATAATTAGACAA+TGG | + | chr8.4:78462826-78462845 | MS.gene022701:intron | 25.0% |
! | TACCTTCATAATTAATCTGT+TGG | - | chr8.4:78461954-78461973 | None:intergenic | 25.0% |
! | TAGTTAATTCTTTGTGTGAA+AGG | + | chr8.4:78464399-78464418 | MS.gene022701:CDS | 25.0% |
! | TCCATATATCAACTAAGATT+GGG | + | chr8.4:78463179-78463198 | MS.gene022701:CDS | 25.0% |
! | TGACACAAAAAATAAACTCA+AGG | - | chr8.4:78463909-78463928 | None:intergenic | 25.0% |
! | TTACTCTCTTAGAAATCAAA+AGG | + | chr8.4:78465017-78465036 | MS.gene022701:intron | 25.0% |
! | TTCATGAAATTAAAGTCACA+TGG | - | chr8.4:78460433-78460452 | None:intergenic | 25.0% |
! | TTTATTTCCATATTATTGGG+AGG | - | chr8.4:78459732-78459751 | None:intergenic | 25.0% |
!! | AATAAAAACCACTTGATAGT+TGG | - | chr8.4:78460127-78460146 | None:intergenic | 25.0% |
!! | ATTTTTGTCATGAGTTAAGT+TGG | + | chr8.4:78461535-78461554 | MS.gene022701:intron | 25.0% |
!! | CAATCTTTTCGAAATTTCTT+TGG | - | chr8.4:78464904-78464923 | None:intergenic | 25.0% |
!! | GAAAATCAAGTTTTTCTTTG+TGG | + | chr8.4:78464350-78464369 | MS.gene022701:CDS | 25.0% |
!! | GAGAATGATATCTAGAATAA+AGG | - | chr8.4:78459626-78459645 | None:intergenic | 25.0% |
!! | GTACTATGACTTTATTTCAT+AGG | - | chr8.4:78461913-78461932 | None:intergenic | 25.0% |
!! | TAAGTATCGTAAATATGAGT+TGG | + | chr8.4:78462206-78462225 | MS.gene022701:intron | 25.0% |
!! | TATACAATCATTTGTTACCA+CGG | + | chr8.4:78461310-78461329 | MS.gene022701:intron | 25.0% |
!! | TTTTGTATATGCAACAGAAT+TGG | + | chr8.4:78465402-78465421 | MS.gene022701:intron | 25.0% |
!! | TTTTTGTCATGAGTTAAGTT+GGG | + | chr8.4:78461536-78461555 | MS.gene022701:intron | 25.0% |
!!! | ATAAAAGGGTGTTTAGATAT+AGG | + | chr8.4:78462100-78462119 | MS.gene022701:intron | 25.0% |
!!! | TAAAAGGGTGTTTAGATATA+GGG | + | chr8.4:78462101-78462120 | MS.gene022701:intron | 25.0% |
!!! | TGGAGTACTTTTTTTATGTT+AGG | + | chr8.4:78462846-78462865 | MS.gene022701:intron | 25.0% |
!!! | TGTTTAGCATTGACAAATTA+TGG | + | chr8.4:78465513-78465532 | MS.gene022701:CDS | 25.0% |
!!! | TTTTTTTCCTTCTTTCTTTC+AGG | + | chr8.4:78464550-78464569 | MS.gene022701:intron | 25.0% |
AAGATGCTTACATATAAGGA+CGG | - | chr8.4:78462067-78462086 | None:intergenic | 30.0% | |
AATGGCAAATAGCAAAAAGT+AGG | - | chr8.4:78460646-78460665 | None:intergenic | 30.0% | |
ACACTTAGTCCTTCAAATAA+GGG | + | chr8.4:78464047-78464066 | MS.gene022701:intron | 30.0% | |
ACATTATCCAAACATAGCTT+TGG | + | chr8.4:78459248-78459267 | MS.gene022701:intron | 30.0% | |
ACGATGCATAAAATATGCAA+AGG | + | chr8.4:78463724-78463743 | MS.gene022701:intron | 30.0% | |
ACTCATAATGCTAGACAATT+TGG | + | chr8.4:78463942-78463961 | MS.gene022701:intron | 30.0% | |
AGGATAAACTCACAAGTTAT+TGG | - | chr8.4:78459675-78459694 | None:intergenic | 30.0% | |
AGTCTCAAAAATTACCCATA+TGG | + | chr8.4:78459508-78459527 | MS.gene022701:CDS | 30.0% | |
AGTGGACATTGGATAAATTA+GGG | - | chr8.4:78464960-78464979 | None:intergenic | 30.0% | |
ATAAAATATGCAAAGGTCCA+GGG | + | chr8.4:78463731-78463750 | MS.gene022701:intron | 30.0% | |
ATACTTAAGGATTGGAAAGA+TGG | - | chr8.4:78460796-78460815 | None:intergenic | 30.0% | |
ATATGCTCAATTTGCAATCA+TGG | + | chr8.4:78463333-78463352 | MS.gene022701:CDS | 30.0% | |
ATCAATGTAAGCAAGATAAC+CGG | - | chr8.4:78460718-78460737 | None:intergenic | 30.0% | |
ATCATTGTCTTGATCATAGT+CGG | + | chr8.4:78465126-78465145 | MS.gene022701:intron | 30.0% | |
ATGACAATTCTTCTACATAG+TGG | + | chr8.4:78459549-78459568 | MS.gene022701:CDS | 30.0% | |
ATGTAGTGTAAAGTTGTTCA+CGG | + | chr8.4:78459794-78459813 | MS.gene022701:intron | 30.0% | |
CAACAATCTTCATCTTAAGT+TGG | - | chr8.4:78464280-78464299 | None:intergenic | 30.0% | |
CACTACATCATACACAATTT+CGG | + | chr8.4:78463012-78463031 | MS.gene022701:CDS | 30.0% | |
CATATATGTTCAATGAATGC+AGG | + | chr8.4:78464208-78464227 | MS.gene022701:intron | 30.0% | |
CATGGACATATTAACAATCT+AGG | - | chr8.4:78460415-78460434 | None:intergenic | 30.0% | |
CTTAAGATGAAGATTGTTGA+TGG | + | chr8.4:78464281-78464300 | MS.gene022701:CDS | 30.0% | |
GAATAAAAATTATTGGGCTG+AGG | + | chr8.4:78460206-78460225 | MS.gene022701:intron | 30.0% | |
GAGATAAAGAGATCCAAATT+TGG | - | chr8.4:78458913-78458932 | None:intergenic | 30.0% | |
GATATAAATGTTAGTGAGTG+TGG | + | chr8.4:78459937-78459956 | MS.gene022701:intron | 30.0% | |
GCTCATGTATAAAATGTTTG+AGG | - | chr8.4:78461421-78461440 | None:intergenic | 30.0% | |
GGGAGGAGAATAAAAATTAT+TGG | + | chr8.4:78460199-78460218 | MS.gene022701:intron | 30.0% | |
GTAACTCCTTATATCTAGTT+GGG | - | chr8.4:78462041-78462060 | None:intergenic | 30.0% | |
GTGACTTTAAATGTGAGTTT+GGG | - | chr8.4:78459149-78459168 | None:intergenic | 30.0% | |
GTGTATACATGGTATACTTA+AGG | - | chr8.4:78460809-78460828 | None:intergenic | 30.0% | |
GTTAATTCTTTGTGTGAAAG+GGG | + | chr8.4:78464401-78464420 | MS.gene022701:CDS | 30.0% | |
TAACTCCTTATATCTAGTTG+GGG | - | chr8.4:78462040-78462059 | None:intergenic | 30.0% | |
TAATGTGAGAAATTCTTAGG+TGG | - | chr8.4:78461844-78461863 | None:intergenic | 30.0% | |
TACATGGTATACTTAAGGAT+TGG | - | chr8.4:78460804-78460823 | None:intergenic | 30.0% | |
TATGCTCAATTTGCAATCAT+GGG | + | chr8.4:78463334-78463353 | MS.gene022701:CDS | 30.0% | |
TGTCTAGCATTATGAGTTAA+GGG | - | chr8.4:78463939-78463958 | None:intergenic | 30.0% | |
TGTGACCAAAGAAAATTTCT+AGG | + | chr8.4:78461811-78461830 | MS.gene022701:intron | 30.0% | |
TTCAAATGCTCCCATTTAAA+AGG | - | chr8.4:78460914-78460933 | None:intergenic | 30.0% | |
TTGTCTAGCATTATGAGTTA+AGG | - | chr8.4:78463940-78463959 | None:intergenic | 30.0% | |
! | AAATTTCTTTGGAGGGAATT+GGG | - | chr8.4:78464893-78464912 | None:intergenic | 30.0% |
! | ACAATCTTCATCTTAAGTTG+GGG | - | chr8.4:78464278-78464297 | None:intergenic | 30.0% |
! | ATTTTATATTGGTCAATGGC+TGG | + | chr8.4:78459479-78459498 | MS.gene022701:CDS | 30.0% |
! | CTTAGTTGATATATGGATTC+AGG | - | chr8.4:78463176-78463195 | None:intergenic | 30.0% |
! | CTTTTCGAAATTTCTTTGGA+GGG | - | chr8.4:78464900-78464919 | None:intergenic | 30.0% |
! | GTAATTGCTGTTGTGTATAA+TGG | - | chr8.4:78460669-78460688 | None:intergenic | 30.0% |
! | GTTTGGATAATGTTTTTCCA+GGG | - | chr8.4:78459241-78459260 | None:intergenic | 30.0% |
! | TATTTCGATCCCTTATTTGA+AGG | - | chr8.4:78464059-78464078 | None:intergenic | 30.0% |
! | TCCCAATCTTAGTTGATATA+TGG | - | chr8.4:78463183-78463202 | None:intergenic | 30.0% |
! | TCTAAACACCCTTTTATTAG+AGG | - | chr8.4:78462097-78462116 | None:intergenic | 30.0% |
! | TCTTTTCGAAATTTCTTTGG+AGG | - | chr8.4:78464901-78464920 | None:intergenic | 30.0% |
! | TGATTTCTAAGAGAGTAAAC+TGG | - | chr8.4:78465015-78465034 | None:intergenic | 30.0% |
! | TGTTTGGATAATGTTTTTCC+AGG | - | chr8.4:78459242-78459261 | None:intergenic | 30.0% |
!! | AGTTATTGGTTCTGTAACAA+TGG | - | chr8.4:78459661-78459680 | None:intergenic | 30.0% |
!! | GAACAAAAAAAAGCACCAAA+AGG | + | chr8.4:78464847-78464866 | MS.gene022701:CDS | 30.0% |
!! | TAATCGTAAATAAGGTGTTG+TGG | - | chr8.4:78459094-78459113 | None:intergenic | 30.0% |
!! | TCTAGTTCATGTACATGTTT+TGG | - | chr8.4:78459969-78459988 | None:intergenic | 30.0% |
!! | TGTTTTTGTTACTGTAGTCA+TGG | - | chr8.4:78465215-78465234 | None:intergenic | 30.0% |
!! | TTGATAAAGGTGTTAAGAGT+TGG | - | chr8.4:78460844-78460863 | None:intergenic | 30.0% |
AAAAAACAGAATCGTCGACA+AGG | + | chr8.4:78458952-78458971 | MS.gene022701:CDS | 35.0% | |
AAGATGGAGAAGACTTTCTT+AGG | - | chr8.4:78460780-78460799 | None:intergenic | 35.0% | |
AAGTTTAGGTCTTTCAAACC+AGG | + | chr8.4:78463550-78463569 | MS.gene022701:CDS | 35.0% | |
AATGGTACCTCTATTTCATG+TGG | + | chr8.4:78463237-78463256 | MS.gene022701:CDS | 35.0% | |
AATTTGCAGATATGGCTAGT+TGG | + | chr8.4:78464805-78464824 | MS.gene022701:intron | 35.0% | |
ACCTATTACCAACTATCAAG+TGG | + | chr8.4:78460116-78460135 | MS.gene022701:intron | 35.0% | |
ACGATTACTTAGTGTCTGTT+TGG | + | chr8.4:78459107-78459126 | MS.gene022701:intron | 35.0% | |
AGAAATTCTTAGGTGGTTCA+GGG | - | chr8.4:78461837-78461856 | None:intergenic | 35.0% | |
AGGGGATGATTAATCTTCAA+TGG | - | chr8.4:78465566-78465585 | None:intergenic | 35.0% | |
ATAAAATTAGAGGACTCACC+TGG | - | chr8.4:78463571-78463590 | None:intergenic | 35.0% | |
ATATGGATTCAGGAGTAGTA+AGG | - | chr8.4:78463166-78463185 | None:intergenic | 35.0% | |
ATTGTGTATGATGTAGTGAG+TGG | - | chr8.4:78463010-78463029 | None:intergenic | 35.0% | |
ATTTCCATATTATTGGGAGG+TGG | - | chr8.4:78459729-78459748 | None:intergenic | 35.0% | |
CAATAGTAAAGAAACTCCAC+TGG | - | chr8.4:78459576-78459595 | None:intergenic | 35.0% | |
CAGTGGAGTTTCTTTACTAT+TGG | + | chr8.4:78459574-78459593 | MS.gene022701:CDS | 35.0% | |
CATAAAATATGCAAAGGTCC+AGG | + | chr8.4:78463730-78463749 | MS.gene022701:intron | 35.0% | |
CCTCAAAACTTACTTGAACA+TGG | - | chr8.4:78463373-78463392 | None:intergenic | 35.0% | |
CGCTCGTGTGTTAATAAATT+TGG | - | chr8.4:78461006-78461025 | None:intergenic | 35.0% | |
CGTGACTTTAAATGTGAGTT+TGG | - | chr8.4:78459150-78459169 | None:intergenic | 35.0% | |
GACACTTAGTCCTTCAAATA+AGG | + | chr8.4:78464046-78464065 | MS.gene022701:intron | 35.0% | |
GACATTATTCCCCTTACAAA+TGG | + | chr8.4:78462346-78462365 | MS.gene022701:intron | 35.0% | |
GAGTGGACATTGGATAAATT+AGG | - | chr8.4:78464961-78464980 | None:intergenic | 35.0% | |
GGTAACTCCTTATATCTAGT+TGG | - | chr8.4:78462042-78462061 | None:intergenic | 35.0% | |
GTGGACATTGGATAAATTAG+GGG | - | chr8.4:78464959-78464978 | None:intergenic | 35.0% | |
GTTGTAACCTGAAAGAAAGA+AGG | - | chr8.4:78464560-78464579 | None:intergenic | 35.0% | |
TAAATTAGGGGGAGTTATCA+TGG | - | chr8.4:78464947-78464966 | None:intergenic | 35.0% | |
TAAGAGTTGGATACTTACGA+TGG | - | chr8.4:78460831-78460850 | None:intergenic | 35.0% | |
TACTTACGATGGTGTATACA+TGG | - | chr8.4:78460820-78460839 | None:intergenic | 35.0% | |
TCTTCTCTCTCTTCTTTCTT+TGG | + | chr8.4:78461787-78461806 | MS.gene022701:intron | 35.0% | |
TGGAATGCTGTTAAGAACAA+TGG | - | chr8.4:78464324-78464343 | None:intergenic | 35.0% | |
TGGACATTGGATAAATTAGG+GGG | - | chr8.4:78464958-78464977 | None:intergenic | 35.0% | |
TGGGAAAACCAAATTCTTCT+GGG | - | chr8.4:78464633-78464652 | None:intergenic | 35.0% | |
TGTGACCAAACCAAATTTCT+TGG | - | chr8.4:78461710-78461729 | None:intergenic | 35.0% | |
TTCCATCGAATTTCATCTGT+AGG | - | chr8.4:78463790-78463809 | None:intergenic | 35.0% | |
TTTACCACCTCCCAATAATA+TGG | + | chr8.4:78459722-78459741 | MS.gene022701:intron | 35.0% | |
TTTCATTGTGAATAGTCCAG+AGG | + | chr8.4:78458829-78458848 | MS.gene022701:CDS | 35.0% | |
! | AAGTTGATCGAGAAAGCAAT+TGG | + | chr8.4:78458990-78459009 | MS.gene022701:CDS | 35.0% |
! | CCATGTTCAAGTAAGTTTTG+AGG | + | chr8.4:78463370-78463389 | MS.gene022701:intron | 35.0% |
! | CTTCATGCTTTTAGTAGTGA+AGG | + | chr8.4:78459195-78459214 | MS.gene022701:intron | 35.0% |
! | GAAATTTCTTTGGAGGGAAT+TGG | - | chr8.4:78464894-78464913 | None:intergenic | 35.0% |
! | GGTACAAACAATGATCCTTT+TGG | - | chr8.4:78464865-78464884 | None:intergenic | 35.0% |
! | TAATTATAAAGCATTCGCCG+TGG | - | chr8.4:78461330-78461349 | None:intergenic | 35.0% |
! | TGCTGTTGTGTATAATGGAA+TGG | - | chr8.4:78460664-78460683 | None:intergenic | 35.0% |
!! | ACCACTTGATAGTTGGTAAT+AGG | - | chr8.4:78460120-78460139 | None:intergenic | 35.0% |
!!! | ATGGGTAATTTTTGAGACTC+TGG | - | chr8.4:78459507-78459526 | None:intergenic | 35.0% |
!!! | GACGATTCTGTTTTTTCCTT+TGG | - | chr8.4:78458948-78458967 | None:intergenic | 35.0% |
!!! | GATTCTGTTTTTTCCTTTGG+CGG | - | chr8.4:78458945-78458964 | None:intergenic | 35.0% |
!!! | GTTCTTGTCACTTGGTTTTA+TGG | + | chr8.4:78463278-78463297 | MS.gene022701:CDS | 35.0% |
ACCTTTGCAGAATTTGATCC+TGG | - | chr8.4:78464653-78464672 | None:intergenic | 40.0% | |
AGAACAGACCAAAAGGTGAA+TGG | - | chr8.4:78463263-78463282 | None:intergenic | 40.0% | |
AGACACGCTTCGAATAAGAT+TGG | + | chr8.4:78461147-78461166 | MS.gene022701:intron | 40.0% | |
AGCAGAGTTGAGCAAAGTTA+AGG | + | chr8.4:78463523-78463542 | MS.gene022701:CDS | 40.0% | |
AGCATCCTCACCATCATATA+TGG | - | chr8.4:78458884-78458903 | None:intergenic | 40.0% | |
AGGTACCATTCAGAAGATTG+AGG | - | chr8.4:78463227-78463246 | None:intergenic | 40.0% | |
AGTAACACAGCTAAAACTCG+CGG | + | chr8.4:78461032-78461051 | MS.gene022701:intron | 40.0% | |
AGTGACAAGAACAGACCAAA+AGG | - | chr8.4:78463270-78463289 | None:intergenic | 40.0% | |
ATAACCGGCAAATGATGCTA+TGG | - | chr8.4:78460703-78460722 | None:intergenic | 40.0% | |
ATCTACTAACCTCACAAGAG+TGG | - | chr8.4:78464978-78464997 | None:intergenic | 40.0% | |
ATTGAGATACGATATTGCCC+TGG | + | chr8.4:78459221-78459240 | MS.gene022701:intron | 40.0% | |
CAAACCAAATTTCTTGGTCC+TGG | - | chr8.4:78461704-78461723 | None:intergenic | 40.0% | |
CAAGAAGAGTTATGAGTGCA+TGG | + | chr8.4:78465429-78465448 | MS.gene022701:CDS | 40.0% | |
CAGGACCAAGAAATTTGGTT+TGG | + | chr8.4:78461702-78461721 | MS.gene022701:intron | 40.0% | |
CATGCACTCATAACTCTTCT+TGG | - | chr8.4:78465431-78465450 | None:intergenic | 40.0% | |
CCATCATATATGGGAAGATG+AGG | - | chr8.4:78458874-78458893 | None:intergenic | 40.0% | |
CCTCATCTTCCCATATATGA+TGG | + | chr8.4:78458871-78458890 | MS.gene022701:CDS | 40.0% | |
CCTTTGCAGAATTTGATCCT+GGG | - | chr8.4:78464652-78464671 | None:intergenic | 40.0% | |
CTGGGAAAACCAAATTCTTC+TGG | - | chr8.4:78464634-78464653 | None:intergenic | 40.0% | |
CTTACTTGAACATGGAACCT+TGG | - | chr8.4:78463365-78463384 | None:intergenic | 40.0% | |
GACCTACAGATGAAATTCGA+TGG | + | chr8.4:78463785-78463804 | MS.gene022701:intron | 40.0% | |
GAGAAATTCTTAGGTGGTTC+AGG | - | chr8.4:78461838-78461857 | None:intergenic | 40.0% | |
GAGTAGGTGAGAAATGAATG+TGG | + | chr8.4:78459755-78459774 | MS.gene022701:intron | 40.0% | |
GCATCCTCACCATCATATAT+GGG | - | chr8.4:78458883-78458902 | None:intergenic | 40.0% | |
GGATGCTACATGACCAAATT+TGG | + | chr8.4:78458897-78458916 | MS.gene022701:CDS | 40.0% | |
TAGCGGAAGTCATCTCATTA+AGG | + | chr8.4:78461216-78461235 | MS.gene022701:intron | 40.0% | |
TAGGCTATGTGTTCTGCAAA+TGG | - | chr8.4:78460627-78460646 | None:intergenic | 40.0% | |
TATCTAGTTGGGGAACGATT+TGG | - | chr8.4:78462030-78462049 | None:intergenic | 40.0% | |
TCACATTAAGTTAGGCAGCT+TGG | + | chr8.4:78461856-78461875 | MS.gene022701:intron | 40.0% | |
TCGTTCCCCAACTAGATATA+AGG | + | chr8.4:78462032-78462051 | MS.gene022701:intron | 40.0% | |
TCTTTGTGGTAGACTTGACA+AGG | + | chr8.4:78464364-78464383 | MS.gene022701:CDS | 40.0% | |
TGAACCAGGACCAAGAAATT+TGG | + | chr8.4:78461697-78461716 | MS.gene022701:intron | 40.0% | |
TGAATGGCCACATGAAATAG+AGG | - | chr8.4:78463247-78463266 | None:intergenic | 40.0% | |
TGCATCAAATCTAGTCGTGT+TGG | + | chr8.4:78462289-78462308 | MS.gene022701:intron | 40.0% | |
TGCTTACATATAAGGACGGA+TGG | - | chr8.4:78462063-78462082 | None:intergenic | 40.0% | |
TGTGAATAGTCCAGAGGAAA+AGG | + | chr8.4:78458835-78458854 | MS.gene022701:CDS | 40.0% | |
TTACCCATATGGAGAACTAG+TGG | + | chr8.4:78459519-78459538 | MS.gene022701:CDS | 40.0% | |
TTTGGAGGGAATTGGGAAAA+TGG | - | chr8.4:78464886-78464905 | None:intergenic | 40.0% | |
TTTGGTCTGTTCTTGTCACT+TGG | + | chr8.4:78463270-78463289 | MS.gene022701:CDS | 40.0% | |
! | AACCTAGAGTACTTTGGTAG+TGG | + | chr8.4:78461885-78461904 | MS.gene022701:intron | 40.0% |
! | ACACCACTAGTTCTCCATAT+GGG | - | chr8.4:78459525-78459544 | None:intergenic | 40.0% |
! | ACTACCAAAGTACTCTAGGT+TGG | - | chr8.4:78461886-78461905 | None:intergenic | 40.0% |
! | AGATAAGGAGTGCATCTCTT+AGG | - | chr8.4:78462184-78462203 | None:intergenic | 40.0% |
! | AGGGTGTTTAGATATAGGGA+CGG | + | chr8.4:78462105-78462124 | MS.gene022701:intron | 40.0% |
! | CAGGGCCTAGAAATTTTCTT+TGG | - | chr8.4:78461819-78461838 | None:intergenic | 40.0% |
! | GATGTAGCAATATAATGGGG+AGG | + | chr8.4:78460182-78460201 | MS.gene022701:intron | 40.0% |
! | GGAGACTTGCTCAATAGATA+TGG | + | chr8.4:78464230-78464249 | MS.gene022701:CDS | 40.0% |
! | TCTTCCCATATATGATGGTG+AGG | + | chr8.4:78458876-78458895 | MS.gene022701:CDS | 40.0% |
! | TGAGCTTAGTTCAGTTGGTA+GGG | + | chr8.4:78463701-78463720 | MS.gene022701:intron | 40.0% |
! | TGCAATCATGGGTTATTCCA+AGG | + | chr8.4:78463345-78463364 | MS.gene022701:CDS | 40.0% |
! | TGTGTGCTCTTTGCTATGAA+TGG | - | chr8.4:78458806-78458825 | None:intergenic | 40.0% |
!! | TTTGTGTGAAAGGGGTACTA+AGG | + | chr8.4:78464409-78464428 | MS.gene022701:CDS | 40.0% |
!!! | CAGAAGAATTTGGTTTTCCC+AGG | + | chr8.4:78464632-78464651 | MS.gene022701:CDS | 40.0% |
AACCTCACAAGAGTGGACAT+TGG | - | chr8.4:78464971-78464990 | None:intergenic | 45.0% | |
AGTCGTGAGTCGTGACATTA+AGG | - | chr8.4:78465244-78465263 | None:intergenic | 45.0% | |
AGTTGGAGATCAATGTGAGG+AGG | + | chr8.4:78464822-78464841 | MS.gene022701:CDS | 45.0% | |
ATCCAATGTCCACTCTTGTG+AGG | + | chr8.4:78464966-78464985 | MS.gene022701:CDS | 45.0% | |
ATGAACGTCCCAACCTTCTA+AGG | - | chr8.4:78465477-78465496 | None:intergenic | 45.0% | |
ATGCCGTGGTTCAAGAGAAA+TGG | - | chr8.4:78461244-78461263 | None:intergenic | 45.0% | |
ATTGCACGCCTTAGAAGGTT+GGG | + | chr8.4:78465466-78465485 | MS.gene022701:CDS | 45.0% | |
CATATGGAGAACTAGTGGTG+TGG | + | chr8.4:78459524-78459543 | MS.gene022701:CDS | 45.0% | |
CCATTCAGAAGATTGAGGTG+AGG | - | chr8.4:78463222-78463241 | None:intergenic | 45.0% | |
CCCAGGATCAAATTCTGCAA+AGG | + | chr8.4:78464649-78464668 | MS.gene022701:CDS | 45.0% | |
CCTCACCTCAATCTTCTGAA+TGG | + | chr8.4:78463219-78463238 | MS.gene022701:CDS | 45.0% | |
CTCGAAGTCCCAGAAGAATT+TGG | + | chr8.4:78464622-78464641 | MS.gene022701:CDS | 45.0% | |
GAGAAACTCTTCTGTGAACC+AGG | + | chr8.4:78461683-78461702 | MS.gene022701:intron | 45.0% | |
GCATCCATAGCATCATTTGC+CGG | + | chr8.4:78460696-78460715 | MS.gene022701:CDS | 45.0% | |
GCTAGTTGGAGATCAATGTG+AGG | + | chr8.4:78464819-78464838 | MS.gene022701:CDS | 45.0% | |
GGAAGATGAGGAAGTTACTG+AGG | - | chr8.4:78458862-78458881 | None:intergenic | 45.0% | |
GGAATATTGCACGCCTTAGA+AGG | + | chr8.4:78465461-78465480 | MS.gene022701:CDS | 45.0% | |
GTCCCATTTCTCTTGAACCA+CGG | + | chr8.4:78461238-78461257 | MS.gene022701:intron | 45.0% | |
GTGAGCTTAGTTCAGTTGGT+AGG | + | chr8.4:78463700-78463719 | MS.gene022701:intron | 45.0% | |
TATTGCACGCCTTAGAAGGT+TGG | + | chr8.4:78465465-78465484 | MS.gene022701:CDS | 45.0% | |
TGCCGTGGTTCAAGAGAAAT+GGG | - | chr8.4:78461243-78461262 | None:intergenic | 45.0% | |
TGTGTCAAATGCACCACATC+TGG | - | chr8.4:78463143-78463162 | None:intergenic | 45.0% | |
TTCAGAAGATTGAGGTGAGG+AGG | - | chr8.4:78463219-78463238 | None:intergenic | 45.0% | |
! | ATCTAGTCGTGTTGGTCATG+AGG | + | chr8.4:78462297-78462316 | MS.gene022701:intron | 45.0% |
! | CACACCACTAGTTCTCCATA+TGG | - | chr8.4:78459526-78459545 | None:intergenic | 45.0% |
! | GACCACTACCAAAGTACTCT+AGG | - | chr8.4:78461890-78461909 | None:intergenic | 45.0% |
! | TCATGTGGCCATTCACCTTT+TGG | + | chr8.4:78463252-78463271 | MS.gene022701:CDS | 45.0% |
! | TCTAGTCGTGTTGGTCATGA+GGG | + | chr8.4:78462298-78462317 | MS.gene022701:intron | 45.0% |
! | TTACTGAGGTCCTTTTCCTC+TGG | - | chr8.4:78458848-78458867 | None:intergenic | 45.0% |
! | TTATGGTGGAGTTTGAACCC+TGG | - | chr8.4:78463751-78463770 | None:intergenic | 45.0% |
! | TTTTTCCTTTGGCGGTTCGA+TGG | - | chr8.4:78458937-78458956 | None:intergenic | 45.0% |
!! | CAAATTCTTCTGGGACTTCG+AGG | - | chr8.4:78464624-78464643 | None:intergenic | 45.0% |
!! | GATTGTTGATGGCAGTAGCT+TGG | + | chr8.4:78464292-78464311 | MS.gene022701:CDS | 45.0% |
!! | GTGAAAGGGGTACTAAGGTA+TGG | + | chr8.4:78464414-78464433 | MS.gene022701:intron | 45.0% |
!! | TCTTCTACATAGTGGACCAG+TGG | + | chr8.4:78459557-78459576 | MS.gene022701:CDS | 45.0% |
!! | AAAATATTATAACATTTAAA+TGG | - | chr8.4:78463654-78463673 | None:intergenic | 5.0% |
!! | AATAAGATAAAAATTTAATT+CGG | + | chr8.4:78461349-78461368 | MS.gene022701:intron | 5.0% |
!! | TAAAATGTTAAATTAAATAA+AGG | - | chr8.4:78462780-78462799 | None:intergenic | 5.0% |
!! | TTATAATGAATTAAAATTAA+CGG | - | chr8.4:78461457-78461476 | None:intergenic | 5.0% |
!!! | ATAGTTTTTTTTTTTTTTTA+AGG | - | chr8.4:78460290-78460309 | None:intergenic | 5.0% |
!!! | TAGTTTTTTTTTTTTTTTAA+GGG | - | chr8.4:78460289-78460308 | None:intergenic | 5.0% |
AGATTGAGGTGAGGAGGCTA+AGG | - | chr8.4:78463213-78463232 | None:intergenic | 50.0% | |
ATGAGTGCATGGCGTATTGC+TGG | + | chr8.4:78465440-78465459 | MS.gene022701:CDS | 50.0% | |
CCAACTGAACTAAGCTCACG+AGG | - | chr8.4:78463699-78463718 | None:intergenic | 50.0% | |
CCACGGCATACTCAATCACA+TGG | + | chr8.4:78461255-78461274 | MS.gene022701:intron | 50.0% | |
CCATGTGATTGAGTATGCCG+TGG | - | chr8.4:78461258-78461277 | None:intergenic | 50.0% | |
CCTCGTGAGCTTAGTTCAGT+TGG | + | chr8.4:78463696-78463715 | MS.gene022701:intron | 50.0% | |
GGCAAGCAAGTCTTCAGCAT+GGG | + | chr8.4:78465534-78465553 | MS.gene022701:CDS | 50.0% | |
GGTTGGGACGTTCATGAATG+TGG | + | chr8.4:78465482-78465501 | MS.gene022701:CDS | 50.0% | |
TGATGGCAGTAGCTTGGTTG+TGG | + | chr8.4:78464298-78464317 | MS.gene022701:CDS | 50.0% | |
TGGCAAGCAAGTCTTCAGCA+TGG | + | chr8.4:78465533-78465552 | MS.gene022701:CDS | 50.0% | |
TTAGGGGGAGTTATCATGGC+TGG | - | chr8.4:78464943-78464962 | None:intergenic | 50.0% | |
! | AGAAGAAGGTGCACCAGATG+TGG | + | chr8.4:78463127-78463146 | MS.gene022701:CDS | 50.0% |
! | CCAAAGTACTCTAGGTTGGC+AGG | - | chr8.4:78461882-78461901 | None:intergenic | 50.0% |
! | CCTGCCAACCTAGAGTACTT+TGG | + | chr8.4:78461879-78461898 | MS.gene022701:intron | 50.0% |
AAGCTCACGAGGACGTCTGT+AGG | - | chr8.4:78463688-78463707 | None:intergenic | 55.0% | |
TCTCGCCATCGAACCGCCAA+AGG | + | chr8.4:78458929-78458948 | MS.gene022701:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 78458770 | 78465592 | 78458770 | ID=MS.gene022701 |
chr8.4 | mRNA | 78458770 | 78465592 | 78458770 | ID=MS.gene022701.t1;Parent=MS.gene022701 |
chr8.4 | exon | 78458770 | 78459011 | 78458770 | ID=MS.gene022701.t1.exon1;Parent=MS.gene022701.t1 |
chr8.4 | CDS | 78458770 | 78459011 | 78458770 | ID=cds.MS.gene022701.t1;Parent=MS.gene022701.t1 |
chr8.4 | exon | 78459449 | 78459681 | 78459449 | ID=MS.gene022701.t1.exon2;Parent=MS.gene022701.t1 |
chr8.4 | CDS | 78459449 | 78459681 | 78459449 | ID=cds.MS.gene022701.t1;Parent=MS.gene022701.t1 |
chr8.4 | exon | 78460613 | 78460832 | 78460613 | ID=MS.gene022701.t1.exon3;Parent=MS.gene022701.t1 |
chr8.4 | CDS | 78460613 | 78460832 | 78460613 | ID=cds.MS.gene022701.t1;Parent=MS.gene022701.t1 |
chr8.4 | exon | 78463004 | 78463379 | 78463004 | ID=MS.gene022701.t1.exon4;Parent=MS.gene022701.t1 |
chr8.4 | CDS | 78463004 | 78463379 | 78463004 | ID=cds.MS.gene022701.t1;Parent=MS.gene022701.t1 |
chr8.4 | exon | 78463464 | 78463571 | 78463464 | ID=MS.gene022701.t1.exon5;Parent=MS.gene022701.t1 |
chr8.4 | CDS | 78463464 | 78463571 | 78463464 | ID=cds.MS.gene022701.t1;Parent=MS.gene022701.t1 |
chr8.4 | exon | 78464230 | 78464430 | 78464230 | ID=MS.gene022701.t1.exon6;Parent=MS.gene022701.t1 |
chr8.4 | CDS | 78464230 | 78464430 | 78464230 | ID=cds.MS.gene022701.t1;Parent=MS.gene022701.t1 |
chr8.4 | exon | 78464572 | 78464670 | 78464572 | ID=MS.gene022701.t1.exon7;Parent=MS.gene022701.t1 |
chr8.4 | CDS | 78464572 | 78464670 | 78464572 | ID=cds.MS.gene022701.t1;Parent=MS.gene022701.t1 |
chr8.4 | exon | 78464814 | 78464987 | 78464814 | ID=MS.gene022701.t1.exon8;Parent=MS.gene022701.t1 |
chr8.4 | CDS | 78464814 | 78464987 | 78464814 | ID=cds.MS.gene022701.t1;Parent=MS.gene022701.t1 |
chr8.4 | exon | 78465419 | 78465592 | 78465419 | ID=MS.gene022701.t1.exon9;Parent=MS.gene022701.t1 |
chr8.4 | CDS | 78465419 | 78465592 | 78465419 | ID=cds.MS.gene022701.t1;Parent=MS.gene022701.t1 |
Gene Sequence |
Protein sequence |